View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9961_low_9 (Length: 460)

Name: NF9961_low_9
Description: NF9961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9961_low_9
NF9961_low_9
[»] chr5 (7 HSPs)
chr5 (1-330)||(26570088-26570413)
chr5 (168-236)||(4737782-4737850)
chr5 (168-236)||(3259787-3259855)
chr5 (168-236)||(10394113-10394181)
chr5 (168-236)||(12281115-12281183)
chr5 (168-236)||(15915092-15915160)
chr5 (168-236)||(36038564-36038632)
[»] chr8 (4 HSPs)
chr8 (168-255)||(29268794-29268881)
chr8 (195-256)||(29266150-29266211)
chr8 (168-236)||(24023001-24023069)
chr8 (168-236)||(41273764-41273832)
[»] chr7 (4 HSPs)
chr7 (168-236)||(24307086-24307154)
chr7 (168-236)||(30002537-30002605)
chr7 (151-236)||(42489934-42490019)
chr7 (168-236)||(30469417-30469485)
[»] chr4 (5 HSPs)
chr4 (168-236)||(36854917-36854985)
chr4 (171-236)||(19549470-19549535)
chr4 (168-236)||(6784849-6784917)
chr4 (168-236)||(42419689-42419757)
chr4 (168-236)||(50696905-50696973)
[»] chr2 (3 HSPs)
chr2 (168-236)||(863214-863282)
chr2 (168-236)||(24429626-24429694)
chr2 (168-236)||(34452258-34452326)
[»] chr1 (6 HSPs)
chr1 (168-236)||(24081462-24081530)
chr1 (168-236)||(51661336-51661404)
chr1 (195-236)||(46284762-46284803)
chr1 (168-236)||(4595555-4595623)
chr1 (168-236)||(40959751-40959819)
chr1 (168-236)||(48644810-48644878)
[»] chr6 (1 HSPs)
chr6 (168-236)||(1371032-1371100)
[»] chr3 (3 HSPs)
chr3 (168-236)||(37986422-37986490)
chr3 (168-236)||(46889245-46889313)
chr3 (168-236)||(46914979-46915047)


Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 26570413 - 26570088
Alignment:
Q  1 tgtctcaatatgatgaacaactctaacaagtaacaagtgatgggctagtacaccataagtaatgcggnnnnnnnnnggttaaaacaagaattaaggattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||    
T  26570413 tgtctcaatatgatgaacaactctaacaagtaacaagtgatgggctagtacaccataagtaatgcg-aaaaaaaaaggttaaaacaataattaaggattt 26570315  T
Q  101 attgtagtggctgagaattaggaaatattttgtcgacataaattattctagtgattattgtaaatcgttggattgaataaaatgaatggttgatatttga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||     
T  26570314 attgtagtggctgagaattaggaaatattttgtcgacataaattattctagtgatcattgtaaaccgttggattgaataaaataaatggttgatatttgg 26570215  T
Q  201 tgtcaaattaaatttgacattgtggtgtcatttgattatgtctttatacatatataacaaaaaatttcctcgtgacaaaaccaaattagaagaaagacaa 300  Q
    ||| ||||||||||||||||| || ||| |||||||||||||| |||||   ||||||||||  | |||| || |  |||||||||||||||||||| ||    
T  26570214 tgttaaattaaatttgacattatgatgttatttgattatgtctctatac---tataacaaaatttctccttgttatgaaaccaaattagaagaaagataa 26570118  T
Q  301 taaaataaccaataatggattgattcaagt 330  Q
     ||||||||||| || | ||||||||||||    
T  26570117 gaaaataaccaacaacgtattgattcaagt 26570088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 4737782 - 4737850
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||||||||||||| ||| ||||| ||||||| ||| ||||||||  ||||||||||||||    
T  4737782 ttggattaaataaaatgaatggatgagatttggtgtcaaactaattttgacatcatggtgtcatttgat 4737850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 3259787 - 3259855
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||||||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  3259787 ttggattaaataaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 3259855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 10394181 - 10394113
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| | | ||||| ||||||||||| |||||||   ||||||||||||||    
T  10394181 ttggattaaatgaaatgaatggataagatttggtgtcaaattaattttgacaccatggtgtcatttgat 10394113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 12281183 - 12281115
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||||||||||| || ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  12281183 ttggattaaataaaatgaaaggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 12281115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 15915160 - 15915092
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||||||||||| || ||| ||||| ||||||||||| |||||||   || |||||||||||    
T  15915160 ttggattaaataaaatgaaaggatgagatttggtgtcaaattaattttgacaccatgatgtcatttgat 15915092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 36038564 - 36038632
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| | ||||||| ||||||| ||| |||||||   ||||||||||||||    
T  36038564 ttggattaaattaaatgaatggataatatttggtgtcaaactaattttgacaccatggtgtcatttgat 36038632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 29268794 - 29268881
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgattatgtctttatacatatat 255  Q
    ||||||| |||| ||||||||| ||| ||||||||||||||||| |||||||   |||||||||||||| || ||| |||| ||||||    
T  29268794 ttggattaaatataatgaatggatgagatttgatgtcaaattaattttgacaccatggtgtcatttgatcatatctctatatatatat 29268881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 29266211 - 29266150
Alignment:
Q  195 atttgatgtcaaattaaatttgacattgtggtgtcatttgattatgtctttatacatatata 256  Q
    ||||||||||||||| |||||||||   ||||||||||||||||| | | |||| |||||||    
T  29266211 atttgatgtcaaatttaatttgacaccttggtgtcatttgattatatatatatatatatata 29266150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 24023001 - 24023069
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  24023001 ttggattaaatgaaatgaatggatgagatttgttgtcaaactaattttgacaccatggtgtcatttgat 24023069  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 41273764 - 41273832
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||||||||||| || ||| |||| |||||||| ||| |||||||   ||||||||||||||    
T  41273764 ttggattaaataaaatgaagggatgagatttaatgtcaaactaattttgacaccatggtgtcatttgat 41273832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 24307086 - 24307154
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||||||||||| ||| ||||||||  ||||||||||||||    
T  24307086 ttggattaaatgaaatgaatggatgagatttgatgtcaaactaattttgacatcatggtgtcatttgat 24307154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 30002537 - 30002605
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||||||||||||| ||| ||||||||||||| ||| |||||||   ||||||||||||||    
T  30002537 ttggattaaataaaatgaatggatgagatttgatgtcaaactaattttgacaccatggtgtcatttgat 30002605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 42489934 - 42490019
Alignment:
Q  151 gtgattattgtaaatcgttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||| ||| |||| | ||||||| ||| |||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  42489934 gtgataattttaaacctttggattaaatgaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 42490019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 30469417 - 30469485
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| | | ||||||||||||| ||| |||||||   ||||||||||||||    
T  30469417 ttggattaaatgaaatgaatggataagatttgatgtcaaactaattttgacaccatggtgtcatttgat 30469485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 36854985 - 36854917
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||||||||||| || ||| ||||||||||||| ||| |||||||   ||||||||||||||    
T  36854985 ttggattaaataaaatgaagggatgagatttgatgtcaaactaattttgacaccatggtgtcatttgat 36854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 19549535 - 19549470
Alignment:
Q  171 gattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    |||| |||||||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  19549535 gattaaataaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 19549470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 6784917 - 6784849
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  6784917 ttggattaaatgaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 6784849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 42419689 - 42419757
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  42419689 ttggattaaatgaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 42419757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 50696905 - 50696973
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||||||||||| || ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  50696905 ttggattaaataaaatgaagggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 50696973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 863282 - 863214
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||||||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  863282 ttggattaaataaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 863214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 24429694 - 24429626
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||| ||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  24429694 ttggattaaatataatgaatggatgagatttggtgtcaaactaattttgacacgatggtgtcatttgat 24429626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 34452326 - 34452258
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||||||||||| || ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  34452326 ttggattaaataaaatgaagggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 34452258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 24081530 - 24081462
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||| ||||||||||| |||||||   ||||||||||||||    
T  24081530 ttggattaaatgaaatgaatggatgagatttggtgtcaaattaattttgacaccatggtgtcatttgat 24081462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 51661336 - 51661404
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||||||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  51661336 ttggattaaataaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 51661404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 46284803 - 46284762
Alignment:
Q  195 atttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||||||||||| ||||||||| | ||||||||||||||    
T  46284803 atttgatgtcaaatttaatttgacactttggtgtcatttgat 46284762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 4595555 - 4595623
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||| ||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  4595555 ttggattaaatataatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 4595623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 40959751 - 40959819
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||| ||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  40959751 ttggattaaatataatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 40959819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 48644810 - 48644878
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||||||||||| || ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  48644810 ttggattaaataaaatgaagggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 48644878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 1371032 - 1371100
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| |||| ||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  1371032 ttggattaaatataatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 1371100  T

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Target: chr3 (Bit Score: 29; Significance: 0.0000006; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 37986490 - 37986422
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  37986490 ttggattaaatgaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 37986422  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 46889245 - 46889313
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  46889245 ttggattaaatgaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 46889313  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 46915047 - 46914979
Alignment:
Q  168 ttggattgaataaaatgaatggttgatatttgatgtcaaattaaatttgacattgtggtgtcatttgat 236  Q
    ||||||| ||| |||||||||| ||| ||||| ||||||| ||| |||||||   ||||||||||||||    
T  46915047 ttggattaaatgaaatgaatggatgagatttggtgtcaaactaattttgacaccatggtgtcatttgat 46914979  T

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