View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9962_low_4 (Length: 276)

Name: NF9962_low_4
Description: NF9962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9962_low_4
NF9962_low_4
[»] chr2 (3 HSPs)
chr2 (117-266)||(38919249-38919398)
chr2 (14-62)||(38919453-38919501)
chr2 (217-266)||(11307971-11308020)
[»] chr6 (4 HSPs)
chr6 (174-251)||(24645528-24645605)
chr6 (179-251)||(4877990-4878061)
chr6 (181-217)||(5000557-5000593)
chr6 (173-217)||(17341615-17341659)
[»] chr8 (4 HSPs)
chr8 (174-251)||(36450689-36450766)
chr8 (221-266)||(13845277-13845322)
chr8 (179-244)||(39820482-39820547)
chr8 (179-211)||(34223021-34223053)
[»] chr7 (3 HSPs)
chr7 (175-250)||(7133208-7133284)
chr7 (179-228)||(40131939-40131989)
chr7 (179-244)||(23751953-23752018)
[»] chr5 (3 HSPs)
chr5 (202-250)||(43554574-43554622)
chr5 (181-244)||(7997108-7997172)
chr5 (179-250)||(32766872-32766943)
[»] chr3 (5 HSPs)
chr3 (179-250)||(4704220-4704292)
chr3 (177-228)||(27277778-27277829)
chr3 (178-250)||(21211341-21211414)
chr3 (177-217)||(17005546-17005586)
chr3 (181-244)||(24204983-24205047)
[»] chr1 (5 HSPs)
chr1 (179-250)||(9690213-9690285)
chr1 (179-228)||(34741916-34741965)
chr1 (179-215)||(32724044-32724080)
chr1 (178-250)||(42004881-42004953)
chr1 (179-227)||(48450550-48450598)
[»] chr4 (8 HSPs)
chr4 (199-257)||(10133749-10133808)
chr4 (179-244)||(18513175-18513241)
chr4 (177-266)||(31243474-31243564)
chr4 (179-251)||(34306744-34306816)
chr4 (179-250)||(16184879-16184950)
chr4 (179-250)||(24343560-24343632)
chr4 (182-249)||(46715416-46715484)
chr4 (179-250)||(53381530-53381602)
[»] scaffold0007 (1 HSPs)
scaffold0007 (181-261)||(225199-225279)
[»] scaffold0020 (1 HSPs)
scaffold0020 (177-228)||(135261-135313)


Alignment Details
Target: chr2 (Bit Score: 146; Significance: 6e-77; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 38919398 - 38919249
Alignment:
Q  117 tcagaaggtttcacaatctttgccccaacagacaatgccttccaaaatcttccatcaggtaactatgaagcacaaacactcttcagattagacgtgtcct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919398 tcagaaggtttcacaatctttgccccaacagacaatgccttccaaaatcttccatcaggtaactatgaagcacaaacactcttcagattagacgtgtcct 38919299  T
Q  217 gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 266  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38919298 gtgtcggacacgcatcagtatccgacaccgacactaacacgacacctatg 38919249  T

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Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 38919501 - 38919453
Alignment:
Q  14 catcacaacaatctttgaaaaagctggtcaatacaacttcctcattcgt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919501 catcacaacaatctttgaaaaagctggtcaatacaacttcctcattcgt 38919453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 11307971 - 11308020
Alignment:
Q  217 gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 266  Q
    |||||||||||||||| || ||| ||||||||||  ||||||||||||||    
T  11307971 gtgtcggacacgcgtcggtgtccaacaccgacaccgacacgacacctatg 11308020  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 24645605 - 24645528
Alignment:
Q  174 ggtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacact 251  Q
    ||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||| ||| || || ||||||||||||    
T  24645605 ggtaactatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtc-gtgtctgacaccgacact 24645528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 4878061 - 4877990
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacact 251  Q
    |||||||||||  |||||| || |||||| |||||||||||||||||| | ||| || |||||||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcctgtgtcggacatgtgtc-gtgtccgacaccgacact 4877990  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 5000557 - 5000593
Alignment:
Q  181 atgaagcacaaacactcttcagattagacgtgtcctg 217  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctg 5000593  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 17341615 - 17341659
Alignment:
Q  173 aggtaactatgaagcacaaacactcttcagattagacgtgtcctg 217  Q
    |||||| |||||||||||||||||| || |||||| |||||||||    
T  17341615 aggtaattatgaagcacaaacactcctcggattaggcgtgtcctg 17341659  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 36450689 - 36450766
Alignment:
Q  174 ggtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacact 251  Q
    |||| |||||||||||| |||||| || |||||| |||||||| |||||||||||||||| || ||||||||| |||||    
T  36450689 ggtagctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtc-gtgtccgacacctacact 36450766  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 13845322 - 13845277
Alignment:
Q  221 cggacacgcgtcagtatccgacaccgacactaacacgacacctatg 266  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  13845322 cggacacgcgtcagtgtccgacaccgacacagacacgacacctatg 13845277  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 39820547 - 39820482
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacac 244  Q
    |||||||||||  |||||  || |||||| ||||||| |||||||||||||||| || ||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacac 39820482  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 34223053 - 34223021
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgt 211  Q
    ||||||||||||||||||||| |||||||||||    
T  34223053 ctatgaagcacaaacactctttagattagacgt 34223021  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 7133208 - 7133284
Alignment:
Q  175 gtaactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||||||||||||  || ||| |||||||||  ||||||  |||||||||||||||| || ||||||||||||||    
T  7133208 gtaactatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacac 7133284  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacg 228  Q
    |||||||||||| |||||| || |||||||||||| |||||||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 23752018 - 23751953
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacac 244  Q
    |||||||||||| |||||  || |||||| ||||||| ||||| |||||||||| || ||||||||    
T  23752018 ctatgaagcacagacacttatcggattaggcgtgtcccgtgtctgacacgcgtcggtgtccgacac 23751953  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 43554622 - 43554574
Alignment:
Q  202 gattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||| ||||||| |||||||||||||||| || ||||||||||||||    
T  43554622 gattaggcgtgtcccgtgtcggacacgcgtcggtgtccgacaccgacac 43554574  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 7997108 - 7997172
Alignment:
Q  181 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacac 244  Q
    ||||||||||||||||  ||  |||||  |||||||| |||||||||||||||||| ||||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac 7997172  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 32766872 - 32766943
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||||||||  |||||| ||||||||||||| |||| |||||||||||| ||| || | ||||||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtc-gttttcgacaccgacac 32766943  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 4704220 - 4704292
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||| ||||||||| || |||||||||| ||||||| |||| |||||||||| ||| || |||||||||||    
T  4704220 ctatgacgcacaaacattcctcagattagatgtgtcctagtgttggacacgcgttagtgtcagacaccgacac 4704292  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 27277778 - 27277829
Alignment:
Q  177 aactatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacg 228  Q
    |||||||||||||| |||||| || |||||||| ||||| ||||||||||||    
T  27277778 aactatgaagcacatacactcctcggattagacatgtcccgtgtcggacacg 27277829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 21211414 - 21211341
Alignment:
Q  178 actatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||||||||||||||||| || ||||||  |||| || |||||||||||||||| || ||  ||||||||||    
T  21211414 actatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacac 21211341  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 17005546 - 17005586
Alignment:
Q  177 aactatgaagcacaaacactcttcagattagacgtgtcctg 217  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  17005546 aactatgaagcacaaacactcctcggattagaggtgtcctg 17005586  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 24204983 - 24205047
Alignment:
Q  181 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacac 244  Q
    |||||||||  |||||| ||  ||||| ||||||||| |||||||||||||||||| ||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac 24205047  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 9690213 - 9690285
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||||||||||||||||| | |||||| ||||| || |||||||||||| ||||||  ||||| |||||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacac 9690285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 34741965 - 34741916
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacg 228  Q
    |||||||||||  ||||||||| |||||| ||||||| ||||||||||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtcccgtgtcggacacg 34741916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 32724044 - 32724080
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcc 215  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  32724044 ctatgaagcacaaagactcttcagattaaacgtgtcc 32724080  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 42004881 - 42004953
Alignment:
Q  178 actatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    ||||||||||||  |||||||||  ||||| |||||   |||||||||| ||||| || ||||||||||||||    
T  42004881 actatgaagcacggacactcttcgaattaggcgtgtttagtgtcggacatgcgtcggtgtccgacaccgacac 42004953  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 48450550 - 48450598
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcctgtgtcggacac 227  Q
    |||||||||||  |||||| || |||||||||||||||||||| |||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcctgtgtccgacac 48450598  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 10133808 - 10133749
Alignment:
Q  199 tcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacactaacacg 257  Q
    |||||||||  |||||||| |||||||||||||||||| || ||||||||||| ||||||    
T  10133808 tcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgacaccaacacg 10133749  T

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Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 18513175 - 18513241
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacac 244  Q
    |||||||||||  |||||| ||||||||| |||||||| ||||||||||| |||| || ||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacac 18513241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 31243474 - 31243564
Alignment:
Q  177 aactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacgcgtcagtatccgacaccgacactaacacgacacctatg 266  Q
    ||||||||| ||||||||||| ||| |||||  ||||||| |||||| |||||| || || ||||||||| ||||  ||| ||||||||||    
T  31243474 aactatgaaccacaaacactcctcatattaggtgtgtcctggtgtcgaacacgcatcggtgtccgacaccaacaccgacatgacacctatg 31243564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 34306744 - 34306816
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtc-ctgtgtcggacacgcgtcagtatccgacaccgacact 251  Q
    ||||||||||| |||| || ||||||||| |||||| | |||||||||||| ||| || |||||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtc-gtgtccgacaccgacact 34306816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 16184950 - 16184879
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgacac 250  Q
    ||||||||||||||||||| || |||||| ||||| || |||||||||| || || |||| ||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatc-gtatgcgacaccgacac 16184879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 24343632 - 24343560
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||||||||  |||||| ||||| ||| ||||||| | ||||||||||||||| || || |||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 46715416 - 46715484
Alignment:
Q  182 tgaagcacaaacactcttcagattagacgtgt-cctgtgtcggacacgcgtcagtatccgacaccgaca 249  Q
    |||||||| ||||||| || |||||||| ||| || |||||||||||||| |||| |||||||| ||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggacacgcggcagtgtccgacacagaca 46715484  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 53381530 - 53381602
Alignment:
Q  179 ctatgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacac 250  Q
    |||||||||||  |||||| || ||||||  |||||| | ||||||| |||||||||| ||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 225199 - 225279
Alignment:
Q  181 atgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcgtcagtatccgacaccgacactaacacgacac 261  Q
    |||||||||  |||||| ||  ||||| ||||||||| ||||| |||||||||||| ||||||| |||||| ||||||||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgaca-cgacaccaacacgacac 225279  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 135261 - 135313
Alignment:
Q  177 aactatgaagcacaaacactcttcagattagacgtgtcct-gtgtcggacacg 228  Q
    ||||||||||||| ||||| | ||||||||| |||||||| ||||||||||||    
T  135261 aactatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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