View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9963_low_12 (Length: 348)

Name: NF9963_low_12
Description: NF9963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9963_low_12
NF9963_low_12
[»] chr2 (34 HSPs)
chr2 (1-328)||(3586512-3586828)
chr2 (153-328)||(36267647-36267822)
chr2 (29-100)||(42445801-42445872)
chr2 (29-96)||(22100594-22100661)
chr2 (42-100)||(11708130-11708188)
chr2 (41-99)||(2430771-2430829)
chr2 (41-99)||(17615428-17615486)
chr2 (41-99)||(20505455-20505513)
chr2 (264-328)||(45258030-45258095)
chr2 (264-328)||(10923044-10923107)
chr2 (38-86)||(39670889-39670937)
chr2 (41-96)||(14542318-14542373)
chr2 (41-100)||(27929379-27929437)
chr2 (41-96)||(33666731-33666786)
chr2 (41-96)||(37850812-37850867)
chr2 (29-96)||(39670270-39670337)
chr2 (41-99)||(6206325-6206383)
chr2 (41-99)||(7402144-7402202)
chr2 (41-99)||(10972954-10973012)
chr2 (41-99)||(31653848-31653906)
chr2 (41-99)||(36219122-36219180)
chr2 (41-99)||(40855602-40855660)
chr2 (41-99)||(41179196-41179254)
chr2 (41-99)||(42519571-42519629)
chr2 (41-86)||(3855397-3855442)
chr2 (279-324)||(12127556-12127601)
chr2 (41-86)||(20973747-20973792)
chr2 (41-86)||(22166670-22166715)
chr2 (41-86)||(30098821-30098866)
chr2 (41-101)||(6205721-6205781)
chr2 (41-101)||(9737651-9737711)
chr2 (51-99)||(30273912-30273960)
chr2 (51-87)||(43861614-43861650)
chr2 (41-85)||(44712992-44713036)
[»] chr6 (24 HSPs)
chr6 (153-328)||(11087651-11087827)
chr6 (160-328)||(33597010-33597178)
chr6 (38-87)||(4341554-4341603)
chr6 (41-99)||(33970967-33971025)
chr6 (41-85)||(7855764-7855808)
chr6 (41-100)||(31466641-31466700)
chr6 (41-83)||(13400158-13400200)
chr6 (41-99)||(13400762-13400820)
chr6 (41-99)||(15054394-15054452)
chr6 (41-99)||(16894243-16894301)
chr6 (41-99)||(22006704-22006762)
chr6 (41-99)||(30753342-30753400)
chr6 (41-99)||(31279588-31279646)
chr6 (41-86)||(945408-945453)
chr6 (279-324)||(18147459-18147504)
chr6 (279-328)||(19305613-19305662)
chr6 (278-319)||(22572202-22572243)
chr6 (153-214)||(22572307-22572368)
chr6 (41-78)||(34379229-34379266)
chr6 (41-101)||(12783596-12783656)
chr6 (41-101)||(17122499-17122559)
chr6 (153-193)||(18147590-18147630)
chr6 (165-193)||(23000981-23001009)
chr6 (165-193)||(23787395-23787423)
[»] chr4 (50 HSPs)
chr4 (29-100)||(44547482-44547553)
chr4 (160-328)||(12683934-12684102)
chr4 (29-99)||(30210205-30210275)
chr4 (279-328)||(2674467-2674516)
chr4 (38-87)||(22309633-22309682)
chr4 (280-319)||(29157260-29157299)
chr4 (153-247)||(17218783-17218876)
chr4 (41-99)||(23624974-23625032)
chr4 (41-99)||(28756807-28756865)
chr4 (41-99)||(40943754-40943812)
chr4 (38-100)||(51458936-51458998)
chr4 (41-86)||(8950113-8950158)
chr4 (41-86)||(47875489-47875534)
chr4 (51-99)||(28706601-28706649)
chr4 (38-86)||(50116685-50116733)
chr4 (41-96)||(10386863-10386918)
chr4 (41-96)||(18093207-18093262)
chr4 (41-96)||(23063949-23064004)
chr4 (29-96)||(34509627-34509694)
chr4 (50-96)||(2396654-2396700)
chr4 (46-100)||(3286607-3286661)
chr4 (41-99)||(15637406-15637464)
chr4 (41-99)||(16618406-16618464)
chr4 (41-83)||(19320376-19320418)
chr4 (41-99)||(22516150-22516208)
chr4 (41-99)||(23064547-23064605)
chr4 (41-99)||(24281427-24281485)
chr4 (41-99)||(28541346-28541404)
chr4 (41-99)||(29246462-29246520)
chr4 (41-83)||(29247076-29247118)
chr4 (41-99)||(29446123-29446181)
chr4 (41-99)||(31312633-31312691)
chr4 (41-99)||(35015918-35015976)
chr4 (41-99)||(38698403-38698461)
chr4 (41-99)||(39270246-39270304)
chr4 (49-83)||(41172717-41172751)
chr4 (41-99)||(47015802-47015860)
chr4 (41-99)||(47499769-47499827)
chr4 (41-99)||(52225063-52225121)
chr4 (41-99)||(52822916-52822974)
chr4 (41-99)||(53237531-53237589)
chr4 (41-86)||(11152795-11152840)
chr4 (41-86)||(11996607-11996652)
chr4 (38-87)||(46854937-46854986)
chr4 (41-86)||(50642160-50642205)
chr4 (51-99)||(4553860-4553908)
chr4 (41-101)||(19320978-19321038)
chr4 (41-101)||(28756198-28756258)
chr4 (51-99)||(35627673-35627721)
chr4 (41-101)||(39656121-39656181)
[»] chr7 (26 HSPs)
chr7 (158-325)||(26762684-26762850)
chr7 (29-96)||(36848758-36848826)
chr7 (41-99)||(36039497-36039555)
chr7 (277-325)||(16203873-16203922)
chr7 (275-326)||(5863338-5863389)
chr7 (279-325)||(16204442-16204489)
chr7 (41-96)||(27428317-27428372)
chr7 (41-96)||(33772546-33772601)
chr7 (41-99)||(9900102-9900160)
chr7 (41-99)||(11620538-11620596)
chr7 (38-76)||(13009133-13009171)
chr7 (41-99)||(14962131-14962189)
chr7 (41-99)||(15391603-15391661)
chr7 (41-99)||(24423828-24423886)
chr7 (41-99)||(28642971-28643029)
chr7 (41-99)||(39035398-39035456)
chr7 (41-99)||(45985742-45985800)
chr7 (41-99)||(45990131-45990189)
chr7 (41-99)||(46157627-46157685)
chr7 (41-86)||(499240-499285)
chr7 (41-86)||(26336910-26336955)
chr7 (41-86)||(33771948-33771993)
chr7 (41-86)||(42335074-42335119)
chr7 (41-101)||(2510555-2510615)
chr7 (51-99)||(34651150-34651198)
chr7 (38-86)||(47463131-47463179)
[»] chr8 (39 HSPs)
chr8 (29-100)||(2320898-2320967)
chr8 (274-327)||(18323093-18323146)
chr8 (40-99)||(36610779-36610838)
chr8 (41-99)||(42218822-42218880)
chr8 (42-83)||(5976154-5976195)
chr8 (41-86)||(30611014-30611059)
chr8 (162-214)||(24071088-24071140)
chr8 (41-101)||(26097765-26097825)
chr8 (40-99)||(4517532-4517591)
chr8 (153-192)||(7222177-7222216)
chr8 (41-96)||(8076212-8076267)
chr8 (41-96)||(16729272-16729327)
chr8 (41-96)||(17918969-17919024)
chr8 (41-96)||(41219550-41219605)
chr8 (41-99)||(2061463-2061521)
chr8 (49-99)||(3296005-3296055)
chr8 (41-99)||(7420688-7420746)
chr8 (41-99)||(8076816-8076874)
chr8 (53-99)||(11386050-11386096)
chr8 (41-99)||(16728676-16728734)
chr8 (281-327)||(17698180-17698226)
chr8 (41-99)||(17918357-17918415)
chr8 (41-99)||(19182505-19182563)
chr8 (41-99)||(22849974-22850032)
chr8 (41-99)||(28173782-28173840)
chr8 (41-99)||(32099253-32099311)
chr8 (41-99)||(35209080-35209138)
chr8 (41-87)||(41315619-41315665)
chr8 (41-99)||(45421942-45422000)
chr8 (41-86)||(13083366-13083411)
chr8 (41-82)||(16355944-16355985)
chr8 (41-86)||(18136988-18137033)
chr8 (41-86)||(18365758-18365803)
chr8 (41-86)||(24685967-24686012)
chr8 (41-86)||(36052421-36052466)
chr8 (41-86)||(41220167-41220212)
chr8 (41-86)||(41725381-41725426)
chr8 (41-86)||(42174625-42174670)
chr8 (41-86)||(44090021-44090066)
[»] chr5 (35 HSPs)
chr5 (158-204)||(22902397-22902443)
chr5 (41-100)||(22671464-22671523)
chr5 (274-328)||(32418374-32418428)
chr5 (38-99)||(9265595-9265656)
chr5 (41-86)||(24334518-24334563)
chr5 (41-96)||(19928688-19928743)
chr5 (41-96)||(22981868-22981923)
chr5 (41-88)||(33897302-33897349)
chr5 (41-99)||(156157-156215)
chr5 (41-87)||(796379-796425)
chr5 (41-87)||(3548607-3548653)
chr5 (41-99)||(7234083-7234141)
chr5 (41-99)||(8315119-8315177)
chr5 (41-99)||(14712067-14712125)
chr5 (41-99)||(18076022-18076080)
chr5 (41-99)||(18404848-18404906)
chr5 (41-99)||(18740244-18740302)
chr5 (41-87)||(20453247-20453293)
chr5 (41-99)||(20453519-20453577)
chr5 (41-99)||(24089618-24089676)
chr5 (41-99)||(25001351-25001409)
chr5 (41-99)||(34819402-34819460)
chr5 (52-98)||(37658370-37658416)
chr5 (41-99)||(42992976-42993034)
chr5 (41-86)||(4035164-4035209)
chr5 (271-327)||(19990956-19991013)
chr5 (52-101)||(25728911-25728960)
chr5 (291-328)||(26994511-26994548)
chr5 (41-86)||(27432013-27432058)
chr5 (41-98)||(36816882-36816939)
chr5 (41-86)||(38983904-38983949)
chr5 (41-86)||(41071351-41071396)
chr5 (52-96)||(5597903-5597947)
chr5 (51-99)||(30224992-30225040)
chr5 (41-101)||(36816274-36816334)
[»] chr1 (53 HSPs)
chr1 (41-99)||(10896222-10896280)
chr1 (37-100)||(7551684-7551747)
chr1 (40-99)||(14411388-14411447)
chr1 (39-98)||(17124131-17124190)
chr1 (153-195)||(1659558-1659600)
chr1 (41-99)||(4573628-4573686)
chr1 (41-99)||(25136501-25136559)
chr1 (41-99)||(28254389-28254447)
chr1 (41-99)||(52760987-52761045)
chr1 (38-83)||(7551244-7551289)
chr1 (41-86)||(7604219-7604264)
chr1 (160-204)||(22415048-22415092)
chr1 (41-101)||(48468388-48468448)
chr1 (41-96)||(14006926-14006981)
chr1 (41-96)||(15358502-15358557)
chr1 (41-96)||(28253858-28253913)
chr1 (41-99)||(4829177-4829235)
chr1 (41-99)||(10372313-10372371)
chr1 (41-99)||(10382642-10382700)
chr1 (41-99)||(14743493-14743551)
chr1 (41-99)||(15357887-15357945)
chr1 (41-99)||(15926610-15926668)
chr1 (264-325)||(16030545-16030607)
chr1 (41-99)||(17964603-17964661)
chr1 (41-99)||(26451674-26451732)
chr1 (41-99)||(26508084-26508142)
chr1 (41-99)||(26910719-26910777)
chr1 (41-99)||(31861173-31861231)
chr1 (41-99)||(32036815-32036873)
chr1 (41-99)||(34075650-34075708)
chr1 (41-99)||(36796520-36796578)
chr1 (41-99)||(45194942-45195000)
chr1 (41-99)||(45323737-45323795)
chr1 (41-83)||(45336395-45336437)
chr1 (41-99)||(46184916-46184974)
chr1 (41-99)||(46668106-46668164)
chr1 (41-99)||(47632207-47632265)
chr1 (41-99)||(48609047-48609105)
chr1 (41-99)||(48724012-48724070)
chr1 (41-99)||(52527331-52527389)
chr1 (41-86)||(4058303-4058348)
chr1 (41-86)||(4647716-4647761)
chr1 (51-100)||(23175986-23176035)
chr1 (158-239)||(26977986-26978066)
chr1 (41-86)||(27850852-27850897)
chr1 (41-86)||(45336914-45336959)
chr1 (51-99)||(2207165-2207213)
chr1 (41-85)||(14007210-14007254)
chr1 (41-101)||(26136058-26136118)
chr1 (51-99)||(27032713-27032761)
chr1 (41-101)||(35280028-35280088)
chr1 (51-99)||(43030782-43030830)
chr1 (41-101)||(45194351-45194411)
[»] chr3 (52 HSPs)
chr3 (279-328)||(9800978-9801027)
chr3 (41-86)||(43729326-43729371)
chr3 (153-327)||(17143517-17143690)
chr3 (29-83)||(41642577-41642631)
chr3 (38-100)||(47429068-47429130)
chr3 (41-99)||(49611845-49611903)
chr3 (41-99)||(53963597-53963655)
chr3 (38-99)||(33224775-33224836)
chr3 (31-100)||(52921894-52921963)
chr3 (162-213)||(1771087-1771137)
chr3 (41-96)||(16644791-16644846)
chr3 (41-100)||(47195077-47195136)
chr3 (41-100)||(53519926-53519985)
chr3 (41-96)||(53629158-53629213)
chr3 (41-99)||(1487435-1487493)
chr3 (41-99)||(3077934-3077992)
chr3 (277-323)||(6109547-6109593)
chr3 (41-99)||(10182716-10182774)
chr3 (41-99)||(15491216-15491274)
chr3 (41-99)||(16128092-16128150)
chr3 (41-99)||(16644185-16644243)
chr3 (155-217)||(17485397-17485458)
chr3 (41-99)||(19877950-19878008)
chr3 (41-99)||(28055741-28055799)
chr3 (41-99)||(28066166-28066224)
chr3 (41-99)||(29166594-29166652)
chr3 (41-99)||(30787057-30787115)
chr3 (41-99)||(34779797-34779855)
chr3 (41-99)||(36777429-36777487)
chr3 (41-99)||(37125543-37125601)
chr3 (41-99)||(40127375-40127433)
chr3 (41-99)||(43659972-43660030)
chr3 (41-99)||(51368013-51368071)
chr3 (41-99)||(53628548-53628606)
chr3 (41-99)||(53657565-53657623)
chr3 (41-99)||(53947139-53947197)
chr3 (41-99)||(53963669-53963727)
chr3 (41-99)||(55006641-55006699)
chr3 (41-86)||(24342229-24342274)
chr3 (41-86)||(31269144-31269189)
chr3 (51-100)||(36787795-36787844)
chr3 (51-96)||(42367317-42367362)
chr3 (46-87)||(45344190-45344231)
chr3 (41-86)||(48586370-48586415)
chr3 (41-86)||(50361950-50361995)
chr3 (41-86)||(53328068-53328113)
chr3 (39-100)||(53520194-53520255)
chr3 (153-197)||(7807661-7807705)
chr3 (296-324)||(30607081-30607109)
chr3 (39-87)||(33476451-33476499)
chr3 (41-101)||(47199149-47199209)
chr3 (51-99)||(51325182-51325230)
[»] scaffold0023 (1 HSPs)
scaffold0023 (281-328)||(95705-95752)
[»] scaffold1037 (1 HSPs)
scaffold1037 (41-99)||(599-657)
[»] scaffold1031 (1 HSPs)
scaffold1031 (41-99)||(717-775)
[»] scaffold0291 (1 HSPs)
scaffold0291 (163-214)||(8359-8409)
[»] scaffold0011 (1 HSPs)
scaffold0011 (40-99)||(235002-235061)
[»] scaffold0029 (1 HSPs)
scaffold0029 (41-86)||(17494-17539)
[»] scaffold0126 (1 HSPs)
scaffold0126 (164-204)||(28749-28789)


Alignment Details
Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 3586828 - 3586512
Alignment:
Q  1 atgatatgtattggtcccaatnnnnnnnttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||| |||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  3586828 atgatatgttttggtcccaataaaaaaattcagcagataattttagtctttgttaaattaaaagttgtttaattatgattaaactctgaaacttttaaat 3586729  T
Q  101 agnnnnnnnnnnnnnnatatatgcttgcttagaacattataataagttatgctctgcaccggtcagaagaccaatcacacgttaacacgtggcataaact 200  Q
     |              |||||| ||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  3586728 ggttt-----------atatatacttgcttggaacattataataagttatgttctggaccggttagaagaccaatcacacgttaacacgtggcataaact 3586640  T
Q  201 tacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagtaaaccgcaccacacaaaagcatgcctccgcacgaggatcatcctacaggtgtc 300  Q
    |||||||||||||| || |||||||||| |||||||||| |||||||||||||||||||||| |||||  |||||||||||||||||||||||| |||||    
T  3586639 tacatcgtcttaaggctccgcgcttgagggaacacgccagctcgagtaaaccgcaccacacagaagcacacctccgcacgaggatcatcctacatgtgtc 3586540  T
Q  301 ctctaaccgtccctaatcacacgccgca 328  Q
    ||||||||||||||| ||||||||||||    
T  3586539 ctctaaccgtccctattcacacgccgca 3586512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 328
Target Start/End: Complemental strand, 36267822 - 36267647
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagtaaacc 252  Q
    |||| ||||||||||||||||| ||||||||  ||||| ||||||||||||| ||||||||| ||| ||||  ||   ||||||||| ||| | |  |||    
T  36267822 tctgaaccggtcagaagaccaaccacacgttgccacgtagcataaacttacaccgtcttaaggctttgcgccggaagaaacacgccagctcaattgcacc 36267723  T
Q  253 gcaccacacaaaagcatgcctccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    |  ||| ||  ||||| ||| |||| ||||||||| |||| | ||||| |||||||||||| ||||| ||||||||    
T  36267722 gtcccatactgaagcacgcccccgcgcgaggatcaccctatacgtgtcttctaaccgtcccaaatcatacgccgca 36267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 42445801 - 42445872
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||| ||| ||||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  42445801 ttcagcaaataattttagtctatgttaaattaaaatttctttaattatgattaaactctgaaacttttgaat 42445872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 22100594 - 22100661
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||| ||||||||||||| | ||||||||||| || |||||||||||||||||| ||||||||||    
T  22100594 ttcagcaaatagttttagtctctattaaattaaaatttatttaattatgattaaactctgaaactttt 22100661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 11708130 - 11708188
Alignment:
Q  42 tttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||| |||||||||||||| || |||||||||| ||||| ||||||||||||||||    
T  11708130 tttagtcattgttaaattaaaatttatttaattatgtttaaaatttgaaacttttgaat 11708188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 2430771 - 2430829
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  2430771 ttttagtccttgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 2430829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 17615486 - 17615428
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  17615486 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 17615428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 20505455 - 20505513
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  20505455 ttttagtccttgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 20505513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 45258030 - 45258095
Alignment:
Q  264 aagcatgcctccgcacgaggatcatcctacaggtgtcctctaaccg-tccctaatcacacgccgca 328  Q
    ||||| |||||||  ||||||||| ||| || |||||||||||||| |||||||||||||||||||    
T  45258030 aagcacgcctccgtgcgaggatcaccctgcatgtgtcctctaaccgctccctaatcacacgccgca 45258095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 10923044 - 10923107
Alignment:
Q  264 aagcatgcctccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    ||||||| ||| |||||||||||| |||||| |||||||||  ||||| ||||||||||||||||    
T  10923044 aagcatggctctgcacgaggatcaccctacacgtgtcctct-tccgtctctaatcacacgccgca 10923107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 39670937 - 39670889
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    |||||||||||| | ||||||||||| ||||||||||||| ||||||||    
T  39670937 tagttttagtctctattaaattaaaatttgtttaattatgcttaaactt 39670889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 14542373 - 14542318
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  14542373 ttttagtctctgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 14542318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 27929437 - 27929379
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    |||||||| |||||||||||| | ||||||||||||| ||||||||| ||| ||||||||    
T  27929437 ttttagtccttgttaaattaacatttgtttaattatgtttaaacttttaaa-ttttgaat 27929379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 33666786 - 33666731
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||  |||||||||||| |||||||||||||| ||||||||| ||| ||||    
T  33666786 ttttagtccctgttaaattaaatgttgtttaattatgcttaaacttttaaattttt 33666731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 37850867 - 37850812
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||| ||| ||||    
T  37850867 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttttaaattttt 37850812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 39670270 - 39670337
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||  |||||||| ||| ||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  39670270 ttcagcacgtagttttaatctctgttaaattaaaatttgtttaattatgcttaaaattttaaaatttt 39670337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 6206383 - 6206325
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  6206383 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 6206325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 7402202 - 7402144
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  7402202 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 7402144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 10973012 - 10972954
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  10973012 ttttagtccctgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 10972954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 31653906 - 31653848
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  31653906 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 31653848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 36219180 - 36219122
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| |||||||||||| |||||||||  ||| |||||||    
T  36219180 ttttagtccctgttaaattaaaatttgtttaattataattaaacttctaaatttttgaa 36219122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 40855660 - 40855602
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  40855660 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 40855602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 41179254 - 41179196
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  41179254 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 41179196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 42519571 - 42519629
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  42519571 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 42519629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 3855442 - 3855397
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  3855442 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 3855397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Original strand, 12127556 - 12127601
Alignment:
Q  279 cgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgc 324  Q
    |||||||||  ||||| |||| ||||||||||||||||||||||||    
T  12127556 cgaggatcactctacacgtgttctctaaccgtccctaatcacacgc 12127601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 20973792 - 20973747
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  20973792 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 20973747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 22166670 - 22166715
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  22166670 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 22166715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 30098866 - 30098821
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  30098866 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 30098821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 6205721 - 6205781
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  |||||||||||| |||||||||||||| ||||| ||| ||| |||| ||||    
T  6205721 ttttagtccctgttaaattaaatgttgtttaattatgcttaaaattttaaattttttaata 6205781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 9737711 - 9737651
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  9737711 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 9737651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 30273912 - 30273960
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  30273912 tgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 30273960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 43861614 - 43861650
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  43861614 tgttaaattaaaatttgtttaattatgcttaaacttt 43861650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 44712992 - 44713036
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaact 85  Q
    |||||||| |||||||||||||| |||| |||||||| |||||||    
T  44712992 ttttagtccttgttaaattaaaaattgtataattatgcttaaact 44713036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 328
Target Start/End: Complemental strand, 11087827 - 11087651
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagtaaacc 252  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| ||| |||||| ||| ||  | || ||     
T  11087827 tctggaccggtcagaagaccaatcacacgttaacacgtggcataaacttacaccgtcttaaggctccgcgctcgagggaacactccaacttaaatacact 11087728  T
Q  253 gcaccacacaaaagc-atgcctccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    |  ||||||| ||||   ||| ||   ||||||||| |||||| ||||||||||||||||| |||| ||||||||||    
T  11087727 gtgccacacagaagcgcggcccccatgcgaggatcaccctacacgtgtcctctaaccgtccttaattacacgccgca 11087651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 33597178 - 33597010
Alignment:
Q  160 cggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagtaaaccgcaccac 259  Q
    |||||||||||||||| |||| || ||||||| ||||| |||||| |  |||||| || ||||| |||| |||||||||| ||| |||   |||  ||||    
T  33597178 cggtcagaagaccaataacacattgacacgtgacataa-cttacaccaccttaaggctccgcgcctgagggaacacgccaactcaagtgctccgtgccac 33597080  T
Q  260 acaaaagcatgcctcc-gcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    |||  ||   |||||| || ||||| |||||||||| |||||||||||||| ||||||||| ||||||||    
T  33597079 acatgagtgcgcctcccgcgcgagggtcatcctacatgtgtcctctaaccgcccctaatcatacgccgca 33597010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 4341554 - 4341603
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||    
T  4341554 tagttttagtctttgttaaattaaaacttatttaattatgtttaaacttt 4341603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 33970967 - 33971025
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  33970967 ttttagtctctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 33971025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 7855764 - 7855808
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaact 85  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||    
T  7855764 ttttagtccttgttaaattaaaatttgtttaattatgcttaaact 7855808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 31466700 - 31466641
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||  ||||||||||||| ||||||||||||  ||||||||| ||| ||||||||    
T  31466700 ttttagtccctgttaaattaaaaattgtttaattatagttaaacttttaaaattttgaat 31466641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 13400158 - 13400200
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaa 83  Q
    |||||||| |||||||||||||| ||||||||||||| |||||    
T  13400158 ttttagtccttgttaaattaaaatttgtttaattatgcttaaa 13400200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 13400820 - 13400762
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  13400820 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 13400762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 15054452 - 15054394
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  15054452 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 15054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 16894301 - 16894243
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  16894301 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 16894243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 22006704 - 22006762
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  22006704 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 22006762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 30753342 - 30753400
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  30753342 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 30753400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 31279588 - 31279646
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  31279588 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 31279646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 945408 - 945453
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  945408 ttttagtccgtgttaaattaaaatttgtttaattatgcttaaactt 945453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 18147504 - 18147459
Alignment:
Q  279 cgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgc 324  Q
    ||||||||| | ||||  ||||||||||||||||||||||||||||    
T  18147504 cgaggatcaccttacacatgtcctctaaccgtccctaatcacacgc 18147459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 19305662 - 19305613
Alignment:
Q  279 cgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    ||||||||| |||||| ||||||||||| | ||||||||||||| |||||    
T  19305662 cgaggatcaccctacacgtgtcctctaatcttccctaatcacaccccgca 19305613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 22572243 - 22572202
Alignment:
Q  278 acgaggatcatcctacaggtgtcctctaaccgtccctaatca 319  Q
    |||||||||| || ||| ||||||||||||||||||||||||    
T  22572243 acgaggatcaccccacacgtgtcctctaaccgtccctaatca 22572202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 22572368 - 22572307
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaag 214  Q
    |||| ||| |||| |||||||||||||||||  ||| |||||||||| |||| |||||||||    
T  22572368 tctggaccagtcaaaagaccaatcacacgttggcacatggcataaacatacaccgtcttaag 22572307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 34379266 - 34379229
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatga 78  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  34379266 ttttagtctttgttaaattaaaatttgtttagttatga 34379229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 12783656 - 12783596
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  12783656 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 12783596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 17122499 - 17122559
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    |||||||| |||||||||||||| || |||||||||| ||||| ||| ||| |||| ||||    
T  17122499 ttttagtccttgttaaattaaaatttatttaattatgcttaaaattttaaattttttaata 17122559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 18147630 - 18147590
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggc 193  Q
    |||| |||||| ||||||||||||||||||| |||||||||    
T  18147630 tctggaccggtaagaagaccaatcacacgttgacacgtggc 18147590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 23001009 - 23000981
Alignment:
Q  165 agaagaccaatcacacgttaacacgtggc 193  Q
    |||||||||||||||||||||||||||||    
T  23001009 agaagaccaatcacacgttaacacgtggc 23000981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 23787395 - 23787423
Alignment:
Q  165 agaagaccaatcacacgttaacacgtggc 193  Q
    |||||||||||||||||||||||||||||    
T  23787395 agaagaccaatcacacgttaacacgtggc 23787423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 44547482 - 44547553
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  44547482 ttcagcaaataattttagtctctgttaaattaaaatttgtttaattatgattaaactctgaaacttttgaat 44547553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 12684102 - 12683934
Alignment:
Q  160 cggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagtaaaccgcaccac 259  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| |||||  | ||| | |||   ||||||||| ||| |||  ||||| ||||    
T  12684102 cggtcataagaccaatcacacgttgacacgtggcataaacttacatcgtattaagggtccgctcctgaagaaacacgccagctcaagtgcaccgcgccac 12684003  T
Q  260 acaaaagcatgcctccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    |||||||  | || ||||  |||||||| | |||| |||||||||| | |||| |||||| ||| ||||    
T  12684002 acaaaagtgtccccccgcgtgaggatcaccttacatgtgtcctctagctgtccgtaatcatacgtcgca 12683934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 30210275 - 30210205
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  30210275 ttcagcacataattttagtttttgttaaattaaaatttgtttaattatgtttaaactttcaaatttttgaa 30210205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 2674467 - 2674516
Alignment:
Q  279 cgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  2674467 cgaggatcaccctacacgtgtcctctaactgtccctaatcacacgccgca 2674516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 22309682 - 22309633
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  22309682 tagttttagtcattgttaaattaaaatttgtttaattatgtttaaacttt 22309633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 29157299 - 29157260
Alignment:
Q  280 gaggatcatcctacaggtgtcctctaaccgtccctaatca 319  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  29157299 gaggatcatcctacatgtgtcctctaaccgtccctaatca 29157260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 17218876 - 17218783
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagt 247  Q
    |||| ||| ||||||||||||| ||||||||||| ||||| || |||||||||||||||||| || || |  |||| | |||||||| |||||||    
T  17218876 tctggaccagtcagaagaccaaacacacgttaacgcgtggtat-aacttacatcgtcttaaggctccgtgtctgaggggacacgccaactcgagt 17218783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 23625032 - 23624974
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||| ||| ||| |||||||    
T  23625032 ttttagtctctgttaaattaaaatttgtttaattatgcttaaaattttaaatttttgaa 23624974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 28756865 - 28756807
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  28756865 ttttagtccttgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 28756807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 40943812 - 40943754
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  40943812 ttttagtccttgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 40943754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 51458998 - 51458936
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||||  |||||||||||||| ||||||||| ||| ||||||||| ||| ||||||||    
T  51458998 tagttttagttcttgttaaattaaaatttgtttaataatgtttaaacttttaaatttttgaat 51458936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 8950158 - 8950113
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  8950158 ttttagtctctgttaaattaaaatttgtttaattatgcttaaactt 8950113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 47875489 - 47875534
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  47875489 ttttagtctctgttaaattaaaatttgtttaattatgcttaaactt 47875534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 28706649 - 28706601
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  |||||||||||    
T  28706649 tgttaaattaaaatttgtttaattatgcttaaacttctaaacttttgaa 28706601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 50116733 - 50116685
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||||| |||||||||||||| |||||| |||||| ||||||||    
T  50116733 tagttttagtcgttgttaaattaaaacttgtttgattatgcttaaactt 50116685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 10386918 - 10386863
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  10386918 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 10386863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 18093262 - 18093207
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||| ||| ||||    
T  18093262 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttttaaattttt 18093207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 23063949 - 23064004
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  23063949 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 23064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 34509627 - 34509694
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||  |||||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  34509627 ttcagcacgtagttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 34509694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 2396700 - 2396654
Alignment:
Q  50 ttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||||||||| ||||||||||||| ||||||||| ||| ||||    
T  2396700 ttgttaaattaaaatttgtttaattatgcttaaactttaaaaatttt 2396654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 3286661 - 3286607
Alignment:
Q  46 gtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    |||||||  ||||||||| ||||||||| ||||||||||||| ||| ||||||||    
T  3286661 gtctttgaaaaattaaaacttgtttaataatgattaaactttcaaatttttgaat 3286607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 15637464 - 15637406
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  15637464 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 15637406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 16618406 - 16618464
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  16618406 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 16618464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 19320376 - 19320418
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaa 83  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||    
T  19320376 ttttagtctctgttaaattaaaatttgtttaattatgcttaaa 19320418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 22516208 - 22516150
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  22516208 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 22516150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 23064605 - 23064547
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  23064605 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 23064547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 24281427 - 24281485
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  24281427 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 24281485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 28541404 - 28541346
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||| ||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  28541404 ttttagtctctgtaaaattaaaatttgtttaattatgcttaaacttcaaaatttttgaa 28541346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 29246462 - 29246520
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  29246462 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 29246520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 29247118 - 29247076
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaa 83  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||    
T  29247118 ttttagtctctgttaaattaaaaattgtttaattatgcttaaa 29247076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 29446181 - 29446123
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  29446181 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 29446123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 31312691 - 31312633
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  31312691 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 31312633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 35015976 - 35015918
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  35015976 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 35015918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 38698403 - 38698461
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  38698403 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 38698461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 39270304 - 39270246
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  39270304 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 39270246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 41172717 - 41172751
Alignment:
Q  49 tttgttaaattaaaagttgtttaattatgattaaa 83  Q
    ||||||||||||||| |||||||||||||||||||    
T  41172717 tttgttaaattaaaatttgtttaattatgattaaa 41172751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 47015802 - 47015860
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  47015802 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 47015860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 47499769 - 47499827
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  47499769 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 47499827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 52225121 - 52225063
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  52225121 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 52225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 52822916 - 52822974
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| || |||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  52822916 ttttagtctctgctaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 52822974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 53237531 - 53237589
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  53237531 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 53237589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 11152840 - 11152795
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  11152840 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 11152795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 11996607 - 11996652
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  11996607 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 11996652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 46854986 - 46854937
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    ||||||||||| |||||||||||||| ||||| ||||||  |||||||||    
T  46854986 tagttttagtccttgttaaattaaaatttgttcaattatttttaaacttt 46854937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 50642160 - 50642205
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  50642160 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 50642205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 4553908 - 4553860
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  4553908 tgttaaattaaaatttgtttaattatgcttaaacttataaatttttgaa 4553860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 19321038 - 19320978
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  19321038 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 19320978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 28756198 - 28756258
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  28756198 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 28756258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 35627721 - 35627673
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  35627721 tgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 35627673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 39656121 - 39656181
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  39656121 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 39656181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 26762684 - 26762850
Alignment:
Q  158 accggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagtaaaccgcacc 257  Q
    |||||||| ||||||||||||||||| ||||||||  ||| |||||| || |||||| ||  ||   |||| |||||||||| ||| |||  ||| | ||    
T  26762684 accggtcataagaccaatcacacgttgacacgtggtctaa-cttacaccgccttaaggctcagcctctgagggaacacgccaactcaagtgcaccacgcc 26762782  T
Q  258 acacaaaagcatgcctccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgcc 325  Q
    ||||   |||| ||| | || ||||||||| | |||| ||||||||||||||||||||||||||||||    
T  26762783 acaccgtagcacgcccctgcgcgaggatcaccatacaagtgtcctctaaccgtccctaatcacacgcc 26762850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 36848758 - 36848826
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttg-tttaattatgattaaactttgaaactttt 96  Q
    ||||||| ||||||||||||| | ||||||||||| ||| |||||||||||||||||| ||||||||||    
T  36848758 ttcagcaaatagttttagtctctattaaattaaaatttgttttaattatgattaaactctgaaactttt 36848826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 36039497 - 36039555
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||  |||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  36039497 ttttagttcttgttaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 36039555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 16203922 - 16203873
Alignment:
Q  277 cacgaggatcatcctacaggtgtcctctaaccg-tccctaatcacacgcc 325  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  16203922 cacgaggatcaccctacacgtgtcctctaaccgctccctaatcacacgcc 16203873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 5863389 - 5863338
Alignment:
Q  275 cgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccg 326  Q
    |||||||||||||   |||| |||||||||||||||||||||||||| ||||    
T  5863389 cgcacgaggatcacgttacacgtgtcctctaaccgtccctaatcacatgccg 5863338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 16204489 - 16204442
Alignment:
Q  279 cgaggatcatcctacaggtgtcctctaaccg-tccctaatcacacgcc 325  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  16204489 cgaggatcaccctacacgtgtcctctaaccgctccctaatcacacgcc 16204442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27428317 - 27428372
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||| |||||||||||| |||||||||||||| ||||| ||| ||| ||||    
T  27428317 ttttagtctctgttaaattaaatgttgtttaattatgcttaaaattttaaattttt 27428372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 33772601 - 33772546
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| ||||||||||||| |||||||||||||| ||||| ||| ||| ||||    
T  33772601 ttttagtccttgttaaattaaatgttgtttaattatgcttaaaattttaaattttt 33772546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 9900102 - 9900160
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  9900102 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 9900160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 11620596 - 11620538
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  11620596 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 11620538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 13009133 - 13009171
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattat 76  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  13009133 tagttttagtcattgttaaattaaaatttgtttaattat 13009171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 14962131 - 14962189
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  14962131 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 14962189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 15391603 - 15391661
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  15391603 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 15391661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 24423828 - 24423886
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  24423828 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 24423886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 28643029 - 28642971
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  28643029 ttttagtccatgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 28642971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 39035398 - 39035456
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  39035398 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 39035456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 45985742 - 45985800
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  45985742 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 45985800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 45990131 - 45990189
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  45990131 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 45990189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 46157627 - 46157685
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  46157627 ttttagtccctgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 46157685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 499285 - 499240
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  499285 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 499240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 26336955 - 26336910
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||| | ||||||||||| ||||||||||||| ||||||||    
T  26336955 ttttagtctctattaaattaaaatttgtttaattatgcttaaactt 26336910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 33771948 - 33771993
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  33771948 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 33771993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 42335074 - 42335119
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  42335074 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 42335119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 2510555 - 2510615
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  2510555 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 2510615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 34651150 - 34651198
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  34651150 tgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 34651198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 47463131 - 47463179
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    |||||||||||  | ||||||||||| ||||||||||||| ||||||||    
T  47463131 tagttttagtccctattaaattaaaatttgtttaattatgcttaaactt 47463179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 2320898 - 2320967
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||| ||||||||||||   |||||||||||| || |||||||||||||||||||||||| ||||||||    
T  2320898 ttcagcaaatagttttagtca--gttaaattaaaatttctttaattatgattaaactttgaaatttttgaat 2320967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 18323146 - 18323093
Alignment:
Q  274 ccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgc 327  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||    
T  18323146 ccgcacgaggatcatgctacgtgtgtcctctaaccatccctaatcacacgccgc 18323093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 36610779 - 36610838
Alignment:
Q  40 gttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  36610779 gttttagttcttgttaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 36610838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 42218822 - 42218880
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  42218822 ttttagtctctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 42218880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 5976195 - 5976154
Alignment:
Q  42 tttagtctttgttaaattaaaagttgtttaattatgattaaa 83  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  5976195 tttagtctttgttaaattaaaaattgtttaattatgcttaaa 5976154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 30611014 - 30611059
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||| |||||||||||| |||||||||||||| ||||||||    
T  30611014 ttttagtctatgttaaattaaatgttgtttaattatgtttaaactt 30611059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 24071140 - 24071088
Alignment:
Q  162 gtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaag 214  Q
    |||||||||||||||||||||| ||||||||| |||||| ||| || ||||||    
T  24071140 gtcagaagaccaatcacacgttgacacgtggcctaaactaacagcgccttaag 24071088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 26097765 - 26097825
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    |||||||| ||||||||||||| |||||||||||||| ||||| ||| ||| |||| ||||    
T  26097765 ttttagtccttgttaaattaaatgttgtttaattatgcttaaaattttaaattttttaata 26097825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 4517591 - 4517532
Alignment:
Q  40 gttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  4517591 gttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 4517532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 192
Target Start/End: Complemental strand, 7222216 - 7222177
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtgg 192  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  7222216 tctgaaccggtcagaataccaatcacacgttaacacgtgg 7222177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 8076212 - 8076267
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  8076212 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 8076267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 16729327 - 16729272
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||  ||||||||||||| ||||||||||||||||||| ||| ||| ||||    
T  16729327 ttttagtccctgttaaattaaaatttgtttaattatgattaaaattttaaattttt 16729272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 17919024 - 17918969
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  17919024 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 17918969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 41219550 - 41219605
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  41219550 ttttagtctatgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 41219605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 2061521 - 2061463
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  2061521 ttttagtccctgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 2061463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 3296055 - 3296005
Alignment:
Q  49 tttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  3296055 tttgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 3296005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 7420746 - 7420688
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  7420746 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 7420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 8076874 - 8076816
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  8076874 ttttagtccatgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 8076816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 11386096 - 11386050
Alignment:
Q  53 ttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||||||||||||||| ||||||||  ||| |||||||    
T  11386096 ttaaattaaaagttgtttaattatgcttaaacttctaaatttttgaa 11386050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 16728676 - 16728734
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  16728676 ttttagtccatgttaaattaaaatttgtttaattatgcttaaacttcaaaatttttgaa 16728734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 17698180 - 17698226
Alignment:
Q  281 aggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgc 327  Q
    ||||| |||||| | ||||||| ||||||||||||||||||||||||    
T  17698180 aggataatcctatatgtgtcctttaaccgtccctaatcacacgccgc 17698226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 17918357 - 17918415
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  17918357 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 17918415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 19182505 - 19182563
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  19182505 ttttagtcgctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 19182563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 22850032 - 22849974
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||||  ||| |||||||    
T  22850032 ttttagtccatgttaaattaaaatttgtttaaatatgattaaacttctaaatttttgaa 22849974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 28173782 - 28173840
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  28173782 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 28173840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 32099311 - 32099253
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  32099311 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 32099253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 35209080 - 35209138
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| || |||||||||| ||||||||  ||| |||||||    
T  35209080 ttttagtctctgttaaattaaaatttatttaattatgtttaaacttctaaatttttgaa 35209138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 41315665 - 41315619
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    |||||||| |||||||||||||| ||||||||||||  |||||||||    
T  41315665 ttttagtccttgttaaattaaaatttgtttaattatacttaaacttt 41315619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 45422000 - 45421942
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  45422000 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 45421942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 13083411 - 13083366
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    |||||||| |||||||||||||| || |||||||||| ||||||||    
T  13083411 ttttagtccttgttaaattaaaatttatttaattatgcttaaactt 13083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 16355944 - 16355985
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaa 82  Q
    |||||||| |||||||||||||| ||||||||||||| ||||    
T  16355944 ttttagtccttgttaaattaaaatttgtttaattatgcttaa 16355985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 18136988 - 18137033
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  18136988 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 18137033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 18365803 - 18365758
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    |||||||| ||| |||||||||| ||||||||||||| ||||||||    
T  18365803 ttttagtccttgctaaattaaaatttgtttaattatgcttaaactt 18365758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 24686012 - 24685967
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  24686012 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 24685967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 36052466 - 36052421
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  36052466 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 36052421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 41220212 - 41220167
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  41220212 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 41220167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 41725426 - 41725381
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  41725426 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 41725381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 42174670 - 42174625
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  42174670 ttttagtcactgttaaattaaaatttgtttaattatgcttaaactt 42174625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 44090021 - 44090066
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  44090021 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 44090066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 22902397 - 22902443
Alignment:
Q  158 accggtcagaagaccaatcacacgttaacacgtggcataaacttaca 204  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||    
T  22902397 accggtcagaagaccaatcacacgttgacacttggcataaacttaca 22902443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 22671523 - 22671464
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||  ||| ||||||||    
T  22671523 ttttagtccttgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaat 22671464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 32418374 - 32418428
Alignment:
Q  274 ccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    |||| ||||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  32418374 ccgcgcgaggatcaccctacacgtgtcccctaaccatccctaatcacacgccgca 32418428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 9265656 - 9265595
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||| || ||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  9265656 tagttttagtccttattaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 9265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 24334563 - 24334518
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||    
T  24334563 ttttagtccttgttaaattaaaatttgtttaattatgtttaaactt 24334518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 19928743 - 19928688
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  19928743 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 19928688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 22981868 - 22981923
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  22981868 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 22981923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 33897302 - 33897349
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttg 88  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||| ||||    
T  33897302 ttttagtctctgttaaattaaaatttgtttaattatgcttaaaatttg 33897349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 156215 - 156157
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  156215 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttataaatttttgaa 156157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 796425 - 796379
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    ||||||||  ||||||||||||| ||||||||||||| |||||||||    
T  796425 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttt 796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 3548653 - 3548607
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    ||||||||| | ||||||||||| ||||||||||||| |||||||||    
T  3548653 ttttagtctctattaaattaaaatttgtttaattatgcttaaacttt 3548607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 7234083 - 7234141
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  7234083 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 7234141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 8315119 - 8315177
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  8315119 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 8315177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 14712125 - 14712067
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  14712125 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 14712067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 18076080 - 18076022
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  18076080 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttataaatttttgaa 18076022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 18404906 - 18404848
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||| || |||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  18404906 ttttaatccttgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 18404848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 18740244 - 18740302
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| || |||||||||| ||||||||  ||| |||||||    
T  18740244 ttttagtccttgttaaattaaaatttatttaattatgcttaaacttctaaatttttgaa 18740302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 20453247 - 20453293
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    ||||||||||||| ||||||||| ||| ||||||||| |||||||||    
T  20453247 ttttagtctttgtaaaattaaaatttgcttaattatgcttaaacttt 20453293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 20453577 - 20453519
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  20453577 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 20453519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 24089618 - 24089676
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  24089618 ttttagtccctgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 24089676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 25001409 - 25001351
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  25001409 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 25001351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 34819460 - 34819402
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  34819460 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 34819402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 37658416 - 37658370
Alignment:
Q  52 gttaaattaaaagttgtttaattatgattaaactttgaaacttttga 98  Q
    |||||||||||| ||||||||||||| ||||||||| ||| ||||||    
T  37658416 gttaaattaaaatttgtttaattatgtttaaacttttaaatttttga 37658370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 42993034 - 42992976
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  42993034 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 42992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 4035209 - 4035164
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  4035209 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 4035164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 19990956 - 19991013
Alignment:
Q  271 cctccgcacgaggatcatcctacaggtgtcctctaaccg-tccctaatcacacgccgc 327  Q
    ||||||| ||||||||| ||||||  |||| |||||||| ||||||||||||||||||    
T  19990956 cctccgcgcgaggatcaccctacacatgtcttctaaccgctccctaatcacacgccgc 19991013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 25728960 - 25728911
Alignment:
Q  52 gttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    |||||||||||| ||||||||||||| ||||||||| ||| ||| |||||    
T  25728960 gttaaattaaaaattgtttaattatgtttaaactttaaaattttagaata 25728911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 26994511 - 26994548
Alignment:
Q  291 tacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  26994511 tacatgtgtcctctaatcgtccctaatcacacgccgca 26994548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 27432013 - 27432058
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  27432013 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 27432058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 36816939 - 36816882
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttga 98  Q
    ||||||||  ||||||||||||| || |||||||||| ||||||||  ||||||||||    
T  36816939 ttttagtccctgttaaattaaaatttatttaattatgcttaaacttctaaacttttga 36816882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 38983949 - 38983904
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  38983949 ttttagtccctgttaaattaaaatttgtttaattatgtttaaactt 38983904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 41071396 - 41071351
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  41071396 ttttagtccctgttaaattaaaatttgtttaattatgtttaaactt 41071351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 5597947 - 5597903
Alignment:
Q  52 gttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||||||| ||||||||||||| ||||||||| ||| ||||    
T  5597947 gttaaattaaaatttgtttaattatgtttaaacttttaaattttt 5597903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 30224992 - 30225040
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  30224992 tgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 30225040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 36816274 - 36816334
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  |||||||||||| |||||||||||||| ||||| ||| ||| |||| ||||    
T  36816274 ttttagtccatgttaaattaaatgttgtttaattatgcttaaaattttaaattttttaata 36816334  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 10896280 - 10896222
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  10896280 ttttagtccttgttaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 10896222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 7551747 - 7551684
Alignment:
Q  37 atagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||| ||| | ||||||||||| ||||||||||||||| ||||||| ||| ||||||||    
T  7551747 atagttttaatctctattaaattaaaacttgtttaattatgatcaaacttttaaatttttgaat 7551684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 14411447 - 14411388
Alignment:
Q  40 gttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||||  ||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  14411447 gttttagtccctgttaaattaaaatttgtttaattatgtttaaacttttaaatttttgaa 14411388  T

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Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 17124190 - 17124131
Alignment:
Q  39 agttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttga 98  Q
    |||||||||| |||||||||||||| |||||||||||| ||| |||||| ||| ||||||    
T  17124190 agttttagtccttgttaaattaaaatttgtttaattataattgaacttttaaaattttga 17124131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 1659558 - 1659600
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggcat 195  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  1659558 tctgaaccggtcagaagaccaatcacacgttgacacgtggcat 1659600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 4573628 - 4573686
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  4573628 ttttagtctctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 4573686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 25136501 - 25136559
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||  ||| |||||||    
T  25136501 ttttagtccctgttaaattaaaagttgtttaattatgcttaaacttctaaatttttgaa 25136559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 28254447 - 28254389
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||| | ||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  28254447 ttttagtttctgttaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 28254389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 52761045 - 52760987
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  52761045 ttttagtctctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 52760987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 7551244 - 7551289
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaa 83  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  7551244 tagttttagtcattgttaaattaaaatttgtttaattatgtttaaa 7551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 7604264 - 7604219
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||    
T  7604264 ttttagtccttgttaaattaaaatttgtttaattatgcttaaactt 7604219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 22415092 - 22415048
Alignment:
Q  160 cggtcagaagaccaatcacacgttaacacgtggcataaacttaca 204  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||    
T  22415092 cggtcaaaagaccaatcacatgttgacacgtggcataaacttaca 22415048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 48468448 - 48468388
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  48468448 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 48468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 14006926 - 14006981
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  14006926 ttttagtctctgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 14006981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 15358557 - 15358502
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  15358557 ttttagtctctgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 15358502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 28253858 - 28253913
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  28253858 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaaatttt 28253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 4829177 - 4829235
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||  ||||||||  ||| |||||||    
T  4829177 ttttagtctctgttaaattaaaatttgtttaattatacttaaacttctaaatttttgaa 4829235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 10372313 - 10372371
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  10372313 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 10372371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 10382642 - 10382700
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  10382642 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 10382700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 14743493 - 14743551
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  14743493 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 14743551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 15357887 - 15357945
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  15357887 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 15357945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 15926610 - 15926668
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  15926610 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 15926668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 16030607 - 16030545
Alignment:
Q  264 aagcatgcctccgcacgaggatcatcctacaggtgtcctctaaccg-tccctaatcacacgcc 325  Q
    |||||||||||||| || ||||||| ||| | |||| ||||||||| ||||||||||||||||    
T  16030607 aagcatgcctccgcgcgtggatcattctaaacgtgttctctaaccgctccctaatcacacgcc 16030545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 17964661 - 17964603
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  17964661 ttttagtccctgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 17964603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 26451732 - 26451674
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  26451732 ttttagtccctgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 26451674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 26508142 - 26508084
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||||||    
T  26508142 ttttagtccctgttaaattaaaatttgtttaattatgcttaaatttttaaatttttgaa 26508084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 26910719 - 26910777
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| |||||||||||| |||||||||  ||| |||||||    
T  26910719 ttttagtccctgttaaattaaaatttgtttaattataattaaacttctaaatttttgaa 26910777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 31861173 - 31861231
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||| | ||||||||| ||| |||||||    
T  31861173 ttttagtccctgttaaattaaaatttgtttaattacgcttaaacttttaaatttttgaa 31861231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 32036815 - 32036873
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  32036815 ttttagtccatgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 32036873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 34075650 - 34075708
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  34075650 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 34075708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 36796578 - 36796520
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  36796578 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 36796520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 45195000 - 45194942
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  45195000 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 45194942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 45323795 - 45323737
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  45323795 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 45323737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 45336395 - 45336437
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaa 83  Q
    |||||||| |||||||||||||| ||||||||||||| |||||    
T  45336395 ttttagtccttgttaaattaaaatttgtttaattatgcttaaa 45336437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 46184974 - 46184916
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| ||||||||||||  ||||||||  ||| |||||||    
T  46184974 ttttagtccttgttaaattaaaatttgtttaattatacttaaacttctaaatttttgaa 46184916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 46668164 - 46668106
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| || |||||||||| ||||||||  ||| |||||||    
T  46668164 ttttagtccttgttaaattaaaatttatttaattatgcttaaacttctaaatttttgaa 46668106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 47632207 - 47632265
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  47632207 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 47632265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 48609047 - 48609105
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  48609047 ttttagtccatgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 48609105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 48724070 - 48724012
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  48724070 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 48724012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 52527389 - 52527331
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  52527389 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 52527331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 4058348 - 4058303
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  4058348 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 4058303  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 4647761 - 4647716
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||| | ||||||||||| ||||||||||||| ||||||||    
T  4647761 ttttagtctctattaaattaaaatttgtttaattatgcttaaactt 4647716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 23175986 - 23176035
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||||||| ||||||||||||| ||||| ||| ||| ||||||||    
T  23175986 tgttaaattaaaaattgtttaattatgtttaaaatttaaaatttttgaat 23176035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 26978066 - 26977986
Alignment:
Q  158 accggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgcca 239  Q
    |||||| ||||||||||||||||| | ||| ||||| | |||||||| || |||||| |||||||| ||||  |||||||||    
T  26978066 accggtgagaagaccaatcacacgctgacatgtggcct-aacttacaccgccttaaggcttcgcgcctgaggaaacacgcca 26977986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 27850852 - 27850897
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  27850852 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 27850897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 45336959 - 45336914
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  45336959 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 45336914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 2207165 - 2207213
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||  ||||||||| ||| |||||||    
T  2207165 tgttaaattaaaatttgtttaattatacttaaacttttaaatttttgaa 2207213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 14007254 - 14007210
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaact 85  Q
    ||||||||  ||||||||||||| ||||||||||||| |||||||    
T  14007254 ttttagtccctgttaaattaaaatttgtttaattatgcttaaact 14007210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 26136058 - 26136118
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  26136058 ttttagtcactgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 26136118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 27032713 - 27032761
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  27032713 tgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 27032761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 35280028 - 35280088
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||| || |||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  35280028 ttttactccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 35280088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 43030830 - 43030782
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  43030830 tgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 43030782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 45194351 - 45194411
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  45194351 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaaattttaaata 45194411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 9800978 - 9801027
Alignment:
Q  279 cgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    ||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  9800978 cgagggtcaccctacatgtgtcctctaaccgtccctaatcacacgccgca 9801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 43729326 - 43729371
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  43729326 ttttagtctttgttaaattaaaatttgtttaattatgcttaaactt 43729371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 327
Target Start/End: Original strand, 17143517 - 17143690
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagacttcgcgcttgagagaacacgccatctcgagtaaacc 252  Q
    |||| |||||||||||||||||| ||||||||||||||| ||| |||||||| || |||||| ||  |||  |||| |||||| ||| ||  | |   |     
T  17143517 tctggaccggtcagaagaccaattacacgttaacacgtgacat-aacttacaccgccttaaggctctgcgtctgagggaacacaccaacttaaattctct 17143615  T
Q  253 gcaccacacaaaagcatgcctccgcacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgc 327  Q
    |   |||||| ||||| ||| || || |||||||  |||||| ||||||||||  ||||||||||||||||||||    
T  17143616 gtgacacacagaagcacgcccccacatgaggatcgccctacatgtgtcctctagtcgtccctaatcacacgccgc 17143690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 41642631 - 41642577
Alignment:
Q  29 ttcagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaa 83  Q
    |||||||  |||||||||||||| ||||||||||| ||||||||||||| |||||    
T  41642631 ttcagcatgtagttttagtctttattaaattaaaatttgtttaattatgcttaaa 41642577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 47429130 - 47429068
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    |||||||| ||| ||||||||||||| |||||||||||| ||||||| || ||| ||||||||    
T  47429130 tagttttaatctctgttaaattaaaatttgtttaattataattaaacatttaaatttttgaat 47429068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 49611845 - 49611903
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  49611845 ttttagtctctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 49611903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 53963597 - 53963655
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  53963597 ttttagtccttgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 53963655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 33224836 - 33224775
Alignment:
Q  38 tagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||| | |||||||||||| |||||||||||||||  |||||| ||| |||||||    
T  33224836 tagttttagtcctagttaaattaaaatttgtttaattatgatccaacttttaaatttttgaa 33224775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 52921963 - 52921894
Alignment:
Q  31 cagcagatagttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||| ||||||||||||| |  || ||||||| |||| ||||||| |||||||| ||||||||||||||    
T  52921963 cagcaaatagttttagtctctagtagattaaaatttgtataattataattaaactctgaaacttttgaat 52921894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 1771137 - 1771087
Alignment:
Q  162 gtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaa 213  Q
    |||||||||||||||||||||||||||| | ||| |||||||| ||||||||    
T  1771137 gtcagaagaccaatcacacgttaacacgagacat-aacttacaccgtcttaa 1771087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 16644846 - 16644791
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||||||||    
T  16644846 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaactttt 16644791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 47195077 - 47195136
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||| ||| ||||||||||||| ||||||||||||| ||||||||  ||| ||||||||    
T  47195077 ttttaatctctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaat 47195136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 53519926 - 53519985
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||  ||| ||||||||||||||||||||||| ||||||||| ||| | ||||||    
T  53519926 ttttagtccgtgtaaaattaaaagttgtttaattatgcttaaacttttaaattattgaat 53519985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 53629213 - 53629158
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||    
T  53629213 ttttagtccttgttaaattaaaatttgtttaattatgcttaaaattttaaattttt 53629158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 1487493 - 1487435
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  1487493 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 1487435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 3077934 - 3077992
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||||||    
T  3077934 ttttagtccctgttaaattaaaatttgtttaattatgcttaaatttttaaatttttgaa 3077992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 6109547 - 6109593
Alignment:
Q  277 cacgaggatcatcctacaggtgtcctctaaccgtccctaatcacacg 323  Q
    |||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  6109547 cacgaggatcacactacatgtgtcatctaaccgtccctaatcacacg 6109593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 10182774 - 10182716
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  10182774 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 10182716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 15491274 - 15491216
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  15491274 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 15491216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 16128092 - 16128150
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||| ||||||||||||| ||||||| ||||| ||||||||  ||| |||||||    
T  16128092 ttttagtctctgttaaattaaaatttgtttagttatgtttaaacttctaaatttttgaa 16128150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 16644185 - 16644243
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  16644185 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 16644243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 17485397 - 17485458
Alignment:
Q  155 tgcaccggtcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaagact 217  Q
    ||||||||| |||||| ||||||||||  |||||||||||| ||||||| || ||||||||||    
T  17485397 tgcaccggttagaagaacaatcacacgacaacacgtggcat-aacttacgtcatcttaagact 17485458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 19877950 - 19878008
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  19877950 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 19878008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 28055799 - 28055741
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  28055799 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 28055741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 28066224 - 28066166
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  28066224 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 28066166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 29166594 - 29166652
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  29166594 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 29166652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 30787115 - 30787057
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  30787115 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 30787057  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 34779855 - 34779797
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  34779855 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 34779797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 36777429 - 36777487
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  36777429 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 36777487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 37125543 - 37125601
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  37125543 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 37125601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 40127433 - 40127375
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  40127433 ttttagtccatgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 40127375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 43659972 - 43660030
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  43659972 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 43660030  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 51368013 - 51368071
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  51368013 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 51368071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 53628548 - 53628606
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  53628548 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 53628606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 53657565 - 53657623
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  53657565 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 53657623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 53947139 - 53947197
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  53947139 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 53947197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 53963727 - 53963669
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  53963727 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 53963669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 55006699 - 55006641
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  55006699 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttctaaatttttgaa 55006641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 24342229 - 24342274
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  24342229 ttttagtctctgttcaattaaaatttgtttaattatgcttaaactt 24342274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 31269144 - 31269189
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  31269144 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 31269189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 36787795 - 36787844
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||||||| |||||||| |||| ||||| | ||||||||||||||    
T  36787795 tgttaaattaaaatttgtttaaatatgtttaaaatctgaaacttttgaat 36787844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 42367317 - 42367362
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaactttt 96  Q
    ||||||||||||| ||||||||||||| ||||||||| ||| ||||    
T  42367317 tgttaaattaaaatttgtttaattatgcttaaacttttaaattttt 42367362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 45344231 - 45344190
Alignment:
Q  46 gtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    |||||||||||||||||| ||||||||||||  |||||||||    
T  45344231 gtctttgttaaattaaaatttgtttaattatacttaaacttt 45344190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 48586415 - 48586370
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  48586415 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 48586370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 50361950 - 50361995
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  50361950 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 50361995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 53328068 - 53328113
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  53328068 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 53328113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 53520255 - 53520194
Alignment:
Q  39 agttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaat 100  Q
    ||||||||||||| |||||||||||  ||||||||||||  |||||||  ||| ||||||||    
T  53520255 agttttagtctttattaaattaaaatgtgtttaattatgtgtaaacttataaatttttgaat 53520194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 7807705 - 7807661
Alignment:
Q  153 tctgcaccggtcagaagaccaatcacacgttaacacgtggcataa 197  Q
    |||| ||||||||||||||||||  |||| |||||||||||||||    
T  7807705 tctggaccggtcagaagaccaattgcacgctaacacgtggcataa 7807661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 324
Target Start/End: Complemental strand, 30607109 - 30607081
Alignment:
Q  296 gtgtcctctaaccgtccctaatcacacgc 324  Q
    |||||||||||||||||||||||||||||    
T  30607109 gtgtcctctaaccgtccctaatcacacgc 30607081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 33476499 - 33476451
Alignment:
Q  39 agttttagtctttgttaaattaaaagttgtttaattatgattaaacttt 87  Q
    ||||||||||| ||||||||  ||| ||||||||||||| |||||||||    
T  33476499 agttttagtctctgttaaatctaaatttgtttaattatgcttaaacttt 33476451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 47199209 - 47199149
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaata 101  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||| |||| ||||    
T  47199209 ttttagtccctgttaaattaaaatttgtttaattatgcttaaaattttaaattttttaata 47199149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 51325230 - 51325182
Alignment:
Q  51 tgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  51325230 tgttaaattaaaatttgtttaattatgtttaaacttctaaatttttgaa 51325182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 95705 - 95752
Alignment:
Q  281 aggatcatcctacaggtgtcctctaaccgtccctaatcacacgccgca 328  Q
    |||||||  ||||| |||||||||||||||||||||||||||||||||    
T  95705 aggatcactctacatgtgtcctctaaccgtccctaatcacacgccgca 95752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1037 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1037
Description:

Target: scaffold1037; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 657 - 599
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  657 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1031
Description:

Target: scaffold1031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 775 - 717
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  775 ttttagtccctgttaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 8359 - 8409
Alignment:
Q  163 tcagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaag 214  Q
    |||||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  8359 tcagaagaccaatcacacgttaacacgtggtat-aacctacatcgccttaag 8409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 235002 - 235061
Alignment:
Q  40 gttttagtctttgttaaattaaaagttgtttaattatgattaaactttgaaacttttgaa 99  Q
    |||||||||  ||| ||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  235002 gttttagtccctgtcaaattaaaatttgtttaattatgcttaaacttttaaatttttgaa 235061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 17539 - 17494
Alignment:
Q  41 ttttagtctttgttaaattaaaagttgtttaattatgattaaactt 86  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||||    
T  17539 ttttagtccctgttaaattaaaatttgtttaattatgcttaaactt 17494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 28749 - 28789
Alignment:
Q  164 cagaagaccaatcacacgttaacacgtggcataaacttaca 204  Q
    ||||||| || |||||||| |||||||||||||||||||||    
T  28749 cagaagatcagtcacacgtcaacacgtggcataaacttaca 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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