View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9964_7 (Length: 363)

Name: NF9964_7
Description: NF9964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9964_7
NF9964_7
[»] chr6 (38 HSPs)
chr6 (1-353)||(35015014-35015366)
chr6 (1-353)||(19983149-19983500)
chr6 (15-353)||(18583377-18583715)
chr6 (13-310)||(26089793-26090091)
chr6 (13-310)||(18002395-18002693)
chr6 (13-310)||(23994981-23995279)
chr6 (13-310)||(15742120-15742417)
chr6 (68-309)||(4991186-4991427)
chr6 (45-314)||(15889601-15889871)
chr6 (45-314)||(22585441-22585711)
chr6 (45-314)||(22590272-22590542)
chr6 (44-286)||(15004831-15005072)
chr6 (71-310)||(25640456-25640694)
chr6 (1-84)||(25744331-25744414)
chr6 (1-89)||(22440980-22441068)
chr6 (1-89)||(32898836-32898924)
chr6 (1-89)||(13014822-13014910)
chr6 (71-217)||(32276756-32276902)
chr6 (13-89)||(18777204-18777280)
chr6 (15-89)||(31628328-31628402)
chr6 (71-180)||(19629447-19629556)
chr6 (29-89)||(18570353-18570413)
chr6 (15-89)||(18432703-18432777)
chr6 (68-180)||(16300010-16300122)
chr6 (68-180)||(18823417-18823529)
chr6 (68-180)||(18839272-18839384)
chr6 (84-180)||(21931333-21931429)
chr6 (15-89)||(16106576-16106650)
chr6 (73-162)||(26512260-26512349)
chr6 (73-162)||(26517376-26517465)
chr6 (111-205)||(17374924-17375018)
chr6 (15-89)||(16086077-16086151)
chr6 (278-311)||(1650020-1650053)
chr6 (115-180)||(19175311-19175376)
chr6 (294-351)||(21623506-21623563)
chr6 (115-179)||(16136423-16136487)
chr6 (278-310)||(16232199-16232231)
chr6 (278-310)||(19610325-19610357)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-353)||(31137-31489)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-353)||(41355-41707)
scaffold0078 (278-310)||(36980-37012)
[»] chr2 (43 HSPs)
chr2 (1-353)||(22274768-22275120)
chr2 (1-353)||(22284001-22284353)
chr2 (13-310)||(9652796-9653093)
chr2 (13-310)||(21273949-21274246)
chr2 (68-353)||(15633327-15633612)
chr2 (68-309)||(25213162-25213403)
chr2 (1-115)||(23836791-23836906)
chr2 (71-310)||(7321633-7321872)
chr2 (278-353)||(20627195-20627270)
chr2 (1-115)||(25876006-25876120)
chr2 (1-89)||(32465904-32465992)
chr2 (1-115)||(6879483-6879597)
chr2 (278-353)||(19794586-19794661)
chr2 (278-353)||(43642838-43642913)
chr2 (115-232)||(20279571-20279688)
chr2 (45-180)||(33128135-33128270)
chr2 (15-89)||(271230-271304)
chr2 (15-89)||(36890798-36890872)
chr2 (68-180)||(24826748-24826860)
chr2 (15-89)||(25602084-25602158)
chr2 (68-218)||(28031230-28031380)
chr2 (1-89)||(28974095-28974183)
chr2 (15-89)||(4448246-4448320)
chr2 (68-173)||(17204445-17204550)
chr2 (13-93)||(24341513-24341593)
chr2 (273-314)||(19666843-19666884)
chr2 (278-311)||(19689314-19689347)
chr2 (13-89)||(24571404-24571481)
chr2 (103-180)||(25595168-25595245)
chr2 (294-351)||(43646232-43646289)
chr2 (278-310)||(463043-463075)
chr2 (278-310)||(3798520-3798552)
chr2 (278-310)||(8944153-8944185)
chr2 (278-310)||(12635785-12635817)
chr2 (278-310)||(12641559-12641591)
chr2 (278-310)||(12728699-12728731)
chr2 (278-310)||(14906354-14906386)
chr2 (278-310)||(16935900-16935932)
chr2 (278-310)||(17006560-17006592)
chr2 (278-310)||(22863235-22863267)
chr2 (278-310)||(23820388-23820420)
chr2 (278-310)||(36982364-36982396)
chr2 (278-310)||(42177886-42177918)
[»] chr7 (55 HSPs)
chr7 (4-353)||(32493903-32494252)
chr7 (5-353)||(126465-126813)
chr7 (4-353)||(111126-111475)
chr7 (1-353)||(1936874-1937209)
chr7 (3-310)||(42056188-42056496)
chr7 (13-310)||(2028979-2029276)
chr7 (13-310)||(2190085-2190383)
chr7 (13-310)||(3049641-3049937)
chr7 (171-306)||(15516765-15516901)
chr7 (71-262)||(39291457-39291648)
chr7 (68-308)||(13352065-13352306)
chr7 (1-85)||(39046740-39046824)
chr7 (278-351)||(3060271-3060344)
chr7 (13-115)||(44865288-44865391)
chr7 (1-113)||(35094863-35094974)
chr7 (279-353)||(7283913-7283987)
chr7 (6-115)||(47289832-47289942)
chr7 (19-115)||(143703-143800)
chr7 (13-89)||(3895083-3895159)
chr7 (1-89)||(12759033-12759121)
chr7 (1-89)||(11287463-11287551)
chr7 (15-89)||(15822544-15822618)
chr7 (47-231)||(15977820-15978004)
chr7 (15-89)||(7284173-7284247)
chr7 (15-89)||(12369953-12370027)
chr7 (15-89)||(26070377-26070451)
chr7 (15-89)||(26094164-26094238)
chr7 (68-173)||(371203-371308)
chr7 (45-180)||(8563369-8563505)
chr7 (15-89)||(12248233-12248308)
chr7 (15-63)||(45452305-45452353)
chr7 (15-89)||(13274847-13274922)
chr7 (276-351)||(13377849-13377924)
chr7 (15-89)||(16570118-16570193)
chr7 (15-89)||(16595469-16595544)
chr7 (1-89)||(13863042-13863131)
chr7 (15-89)||(49047786-49047861)
chr7 (131-177)||(15575874-15575920)
chr7 (131-205)||(17984753-17984827)
chr7 (294-351)||(13389693-13389750)
chr7 (294-343)||(17223797-17223846)
chr7 (273-310)||(25124445-25124482)
chr7 (278-310)||(7293333-7293365)
chr7 (278-310)||(11516544-11516576)
chr7 (278-310)||(13758677-13758709)
chr7 (278-310)||(14113903-14113935)
chr7 (278-310)||(15441478-15441510)
chr7 (278-310)||(15862226-15862258)
chr7 (278-310)||(15927875-15927907)
chr7 (278-310)||(16212071-16212103)
chr7 (115-255)||(18151259-18151399)
chr7 (278-310)||(18979938-18979970)
chr7 (278-310)||(30262043-30262075)
chr7 (278-310)||(36052971-36053003)
chr7 (13-148)||(46474059-46474195)
[»] scaffold0034 (3 HSPs)
scaffold0034 (4-353)||(79913-80262)
scaffold0034 (16-89)||(46226-46299)
scaffold0034 (1-89)||(40704-40792)
[»] chr1 (25 HSPs)
chr1 (1-353)||(21860057-21860409)
chr1 (4-352)||(44034829-44035177)
chr1 (1-309)||(15861327-15861633)
chr1 (1-233)||(22367065-22367296)
chr1 (217-353)||(41218667-41218803)
chr1 (278-353)||(41394527-41394602)
chr1 (1-115)||(22403196-22403311)
chr1 (13-89)||(41212130-41212206)
chr1 (1-89)||(49967696-49967784)
chr1 (15-89)||(35522432-35522506)
chr1 (13-89)||(27329868-27329944)
chr1 (13-89)||(35054814-35054890)
chr1 (15-89)||(21718288-21718362)
chr1 (71-180)||(20254430-20254539)
chr1 (68-173)||(21650076-21650181)
chr1 (280-351)||(27675120-27675191)
chr1 (15-89)||(9784177-9784248)
chr1 (104-180)||(40436291-40436367)
chr1 (278-311)||(45051726-45051759)
chr1 (15-63)||(9784239-9784287)
chr1 (71-162)||(20194140-20194232)
chr1 (29-93)||(20445754-20445818)
chr1 (29-93)||(20531519-20531583)
chr1 (278-310)||(37844374-37844406)
chr1 (278-310)||(46523695-46523727)
[»] scaffold0686 (2 HSPs)
scaffold0686 (1-352)||(5941-6292)
scaffold0686 (164-352)||(5735-5923)
[»] chr4 (54 HSPs)
chr4 (1-353)||(25119064-25119416)
chr4 (1-353)||(5682385-5682736)
chr4 (1-310)||(14951808-14952117)
chr4 (13-310)||(15272211-15272509)
chr4 (79-314)||(19559483-19559719)
chr4 (208-310)||(15135907-15136010)
chr4 (1-89)||(53704846-53704934)
chr4 (68-351)||(34177502-34177781)
chr4 (68-262)||(49071800-49071994)
chr4 (13-89)||(8872584-8872660)
chr4 (6-89)||(30457954-30458037)
chr4 (278-353)||(54118125-54118200)
chr4 (16-89)||(820029-820102)
chr4 (15-115)||(34395317-34395418)
chr4 (1-89)||(21959576-21959664)
chr4 (9-89)||(44346881-44346961)
chr4 (1-89)||(44055961-44056049)
chr4 (13-85)||(55376714-55376786)
chr4 (1-115)||(23270020-23270135)
chr4 (18-89)||(53907812-53907883)
chr4 (68-218)||(14500208-14500358)
chr4 (1-89)||(16732215-16732303)
chr4 (13-89)||(30232609-30232685)
chr4 (13-89)||(12837313-12837389)
chr4 (68-180)||(14996241-14996353)
chr4 (68-180)||(16522932-16523044)
chr4 (119-184)||(21417471-21417536)
chr4 (68-180)||(8045058-8045170)
chr4 (68-180)||(9295808-9295920)
chr4 (15-89)||(45458968-45459042)
chr4 (97-174)||(32460743-32460820)
chr4 (68-180)||(9795330-9795442)
chr4 (125-180)||(12133631-12133686)
chr4 (15-93)||(10104374-10104452)
chr4 (13-93)||(15675213-15675293)
chr4 (13-93)||(31115688-31115768)
chr4 (2-82)||(52265628-52265708)
chr4 (15-89)||(13809622-13809697)
chr4 (71-162)||(16225211-16225301)
chr4 (276-351)||(41165808-41165883)
chr4 (15-92)||(15044888-15044966)
chr4 (68-174)||(19697408-19697514)
chr4 (68-174)||(19707993-19708099)
chr4 (15-93)||(40885678-40885756)
chr4 (278-311)||(14996445-14996478)
chr4 (278-310)||(7131982-7132014)
chr4 (278-310)||(13246737-13246769)
chr4 (278-310)||(15287162-15287194)
chr4 (278-310)||(15294271-15294303)
chr4 (278-310)||(16327840-16327872)
chr4 (278-310)||(16609013-16609045)
chr4 (278-310)||(17145574-17145606)
chr4 (278-310)||(20001030-20001062)
chr4 (278-310)||(26680517-26680549)
[»] chr3 (80 HSPs)
chr3 (1-353)||(17955837-17956193)
chr3 (4-353)||(7854031-7854380)
chr3 (4-353)||(45581680-45582029)
chr3 (4-353)||(54037981-54038330)
chr3 (1-310)||(30152988-30153297)
chr3 (13-353)||(3992608-3992948)
chr3 (13-353)||(2844249-2844589)
chr3 (4-309)||(54685202-54685507)
chr3 (4-310)||(33341930-33342236)
chr3 (13-310)||(53771099-53771397)
chr3 (13-310)||(23492431-23492728)
chr3 (13-310)||(16261511-16261809)
chr3 (13-310)||(38167972-38168269)
chr3 (91-353)||(55513006-55513268)
chr3 (55-310)||(28558271-28558526)
chr3 (68-310)||(18970034-18970277)
chr3 (71-343)||(15550714-15550986)
chr3 (68-233)||(48421690-48421855)
chr3 (1-89)||(16996172-16996260)
chr3 (1-89)||(317621-317709)
chr3 (1-89)||(19570801-19570889)
chr3 (1-89)||(50112164-50112252)
chr3 (1-89)||(12349843-12349931)
chr3 (278-353)||(19232089-19232164)
chr3 (13-115)||(22144358-22144461)
chr3 (1-113)||(6154419-6154532)
chr3 (1-115)||(6146832-6146947)
chr3 (278-353)||(15857120-15857195)
chr3 (1-89)||(13817561-13817646)
chr3 (1-115)||(16182032-16182146)
chr3 (278-353)||(16743998-16744073)
chr3 (15-89)||(12349652-12349726)
chr3 (15-115)||(53898541-53898642)
chr3 (13-89)||(17100711-17100787)
chr3 (13-89)||(17101396-17101472)
chr3 (13-89)||(19260952-19261028)
chr3 (117-263)||(11402752-11402898)
chr3 (32-94)||(34439451-34439513)
chr3 (15-89)||(35123756-35123830)
chr3 (19-89)||(54424076-54424146)
chr3 (68-180)||(8275874-8275986)
chr3 (68-180)||(9303129-9303241)
chr3 (68-180)||(14285075-14285187)
chr3 (19-89)||(14298485-14298555)
chr3 (19-89)||(14304112-14304182)
chr3 (15-89)||(17523002-17523076)
chr3 (68-174)||(19946812-19946918)
chr3 (115-180)||(14177040-14177105)
chr3 (68-173)||(16934010-16934115)
chr3 (68-180)||(8268774-8268886)
chr3 (111-255)||(17393590-17393735)
chr3 (115-205)||(12539066-12539156)
chr3 (15-76)||(12560362-12560423)
chr3 (16-89)||(14295499-14295573)
chr3 (16-89)||(14301126-14301200)
chr3 (134-205)||(37915290-37915361)
chr3 (100-180)||(38375718-38375798)
chr3 (15-82)||(11329081-11329148)
chr3 (15-89)||(14528124-14528199)
chr3 (15-89)||(17139568-17139643)
chr3 (276-351)||(38810868-38810943)
chr3 (71-180)||(10913001-10913111)
chr3 (15-92)||(12488835-12488913)
chr3 (273-351)||(13301323-13301401)
chr3 (273-351)||(13311979-13312057)
chr3 (278-311)||(15615137-15615170)
chr3 (294-351)||(17205019-17205076)
chr3 (68-109)||(39656453-39656494)
chr3 (273-310)||(51961031-51961068)
chr3 (278-310)||(2050115-2050147)
chr3 (278-310)||(2449152-2449184)
chr3 (278-310)||(8268650-8268682)
chr3 (278-310)||(8275750-8275782)
chr3 (68-180)||(11477220-11477332)
chr3 (278-310)||(14842487-14842519)
chr3 (278-310)||(16933869-16933901)
chr3 (278-310)||(17912398-17912430)
chr3 (278-310)||(18911300-18911332)
chr3 (278-310)||(19260749-19260781)
chr3 (67-115)||(38527841-38527889)
[»] scaffold0016 (4 HSPs)
scaffold0016 (1-352)||(162036-162388)
scaffold0016 (16-353)||(166121-166458)
scaffold0016 (1-89)||(164261-164349)
scaffold0016 (276-351)||(116410-116485)
[»] chr8 (43 HSPs)
chr8 (1-353)||(24716719-24717071)
chr8 (4-353)||(39115324-39115673)
chr8 (1-310)||(41506709-41507018)
chr8 (13-353)||(274501-274841)
chr8 (13-353)||(641008-641348)
chr8 (13-353)||(826814-827154)
chr8 (48-310)||(24385652-24385914)
chr8 (13-175)||(16038916-16039078)
chr8 (69-219)||(22321437-22321587)
chr8 (71-310)||(21259391-21259630)
chr8 (68-314)||(17502274-17502521)
chr8 (68-286)||(23217990-23218208)
chr8 (68-262)||(4233968-4234162)
chr8 (1-115)||(22234890-22235004)
chr8 (278-353)||(16404857-16404932)
chr8 (1-115)||(19993141-19993255)
chr8 (6-115)||(37611719-37611829)
chr8 (1-89)||(41246704-41246792)
chr8 (1-89)||(20481651-20481739)
chr8 (15-89)||(20573305-20573379)
chr8 (68-218)||(22886440-22886590)
chr8 (115-232)||(18118259-18118376)
chr8 (71-180)||(22147555-22147664)
chr8 (69-175)||(2545061-2545167)
chr8 (15-93)||(20647938-20648016)
chr8 (15-89)||(20654018-20654092)
chr8 (71-180)||(18612523-18612632)
chr8 (71-180)||(18619428-18619537)
chr8 (29-93)||(20561740-20561804)
chr8 (78-174)||(21494496-21494592)
chr8 (71-180)||(16002113-16002223)
chr8 (68-173)||(3431317-3431422)
chr8 (19-89)||(21681066-21681137)
chr8 (15-89)||(39446878-39446953)
chr8 (276-310)||(31194217-31194251)
chr8 (278-310)||(5238404-5238436)
chr8 (278-310)||(13662182-13662214)
chr8 (278-310)||(13720845-13720877)
chr8 (278-310)||(16872968-16873000)
chr8 (278-310)||(22907128-22907160)
chr8 (278-310)||(24661162-24661194)
chr8 (278-310)||(43373392-43373424)
chr8 (278-310)||(43685863-43685895)
[»] chr5 (35 HSPs)
chr5 (1-309)||(11342730-11343039)
chr5 (1-310)||(2031856-2032165)
chr5 (13-297)||(21204984-21205268)
chr5 (13-310)||(21650753-21651050)
chr5 (68-310)||(16105757-16105999)
chr5 (80-232)||(22662653-22662805)
chr5 (68-306)||(25004929-25005165)
chr5 (6-89)||(28261572-28261655)
chr5 (6-115)||(21646826-21646935)
chr5 (13-115)||(21397150-21397253)
chr5 (4-89)||(11584100-11584188)
chr5 (1-89)||(4865309-4865397)
chr5 (1-115)||(24475629-24475738)
chr5 (1-89)||(1168317-1168405)
chr5 (1-89)||(20712122-20712210)
chr5 (279-353)||(11584374-11584448)
chr5 (68-180)||(7529014-7529126)
chr5 (71-180)||(17909622-17909731)
chr5 (6-89)||(11337299-11337382)
chr5 (15-89)||(24183245-24183319)
chr5 (68-173)||(9730419-9730524)
chr5 (16-89)||(21906778-21906851)
chr5 (68-180)||(108862-108974)
chr5 (15-82)||(3673922-3673989)
chr5 (13-180)||(11763526-11763694)
chr5 (29-89)||(19405611-19405672)
chr5 (278-310)||(7425631-7425663)
chr5 (278-310)||(20623286-20623318)
chr5 (278-310)||(21233442-21233474)
chr5 (29-93)||(22053957-22054021)
chr5 (15-55)||(23466517-23466557)
chr5 (278-310)||(23507270-23507302)
chr5 (278-310)||(25900320-25900352)
chr5 (278-310)||(35791015-35791047)
chr5 (278-310)||(37053061-37053093)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-353)||(309-660)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-353)||(30137-30492)
[»] scaffold0032 (3 HSPs)
scaffold0032 (13-310)||(55639-55936)
scaffold0032 (207-310)||(108075-108179)
scaffold0032 (273-351)||(104477-104555)
[»] scaffold0597 (1 HSPs)
scaffold0597 (13-310)||(878-1175)
[»] scaffold0251 (2 HSPs)
scaffold0251 (13-310)||(13285-13583)
scaffold0251 (13-138)||(21432-21557)
[»] scaffold0234 (1 HSPs)
scaffold0234 (13-310)||(17304-17601)
[»] scaffold0039 (2 HSPs)
scaffold0039 (4-310)||(12418-12726)
scaffold0039 (4-62)||(19049-19107)
[»] scaffold0706 (1 HSPs)
scaffold0706 (13-310)||(6443-6740)
[»] scaffold0004 (2 HSPs)
scaffold0004 (13-311)||(193396-193684)
scaffold0004 (13-176)||(186560-186722)
[»] scaffold0303 (2 HSPs)
scaffold0303 (64-310)||(4346-4593)
scaffold0303 (13-233)||(5-225)
[»] scaffold0465 (1 HSPs)
scaffold0465 (13-310)||(9882-10163)
[»] scaffold0175 (2 HSPs)
scaffold0175 (13-242)||(15007-15236)
scaffold0175 (278-310)||(882-914)
[»] scaffold0132 (1 HSPs)
scaffold0132 (169-353)||(42568-42749)
[»] scaffold0028 (2 HSPs)
scaffold0028 (68-309)||(130670-130911)
scaffold0028 (16-93)||(89578-89655)
[»] scaffold0574 (1 HSPs)
scaffold0574 (13-180)||(9537-9704)
[»] scaffold0063 (1 HSPs)
scaffold0063 (45-314)||(44009-44279)
[»] scaffold0037 (2 HSPs)
scaffold0037 (15-180)||(95035-95204)
scaffold0037 (13-89)||(24841-24917)
[»] scaffold0507 (1 HSPs)
scaffold0507 (68-343)||(1371-1643)
[»] scaffold1295 (1 HSPs)
scaffold1295 (68-351)||(219-499)
[»] scaffold0091 (2 HSPs)
scaffold0091 (1-115)||(32249-32363)
scaffold0091 (1-115)||(41940-42054)
[»] scaffold0079 (1 HSPs)
scaffold0079 (70-314)||(3732-3981)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-115)||(14923-15034)
[»] scaffold0077 (3 HSPs)
scaffold0077 (13-89)||(15584-15660)
scaffold0077 (279-353)||(15324-15398)
scaffold0077 (278-311)||(36836-36869)
[»] scaffold0673 (2 HSPs)
scaffold0673 (13-115)||(6932-7034)
scaffold0673 (15-89)||(935-1009)
[»] scaffold0057 (1 HSPs)
scaffold0057 (68-205)||(5996-6133)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-89)||(132363-132451)
scaffold0021 (13-89)||(88333-88409)
scaffold0021 (15-88)||(11747-11821)
[»] scaffold0001 (5 HSPs)
scaffold0001 (1-89)||(70735-70823)
scaffold0001 (68-180)||(164995-165107)
scaffold0001 (15-82)||(60866-60933)
scaffold0001 (278-310)||(172210-172242)
scaffold0001 (278-310)||(177913-177945)
[»] scaffold0011 (2 HSPs)
scaffold0011 (15-115)||(254900-255001)
scaffold0011 (15-115)||(261506-261607)
[»] scaffold0480 (2 HSPs)
scaffold0480 (1-89)||(5359-5447)
scaffold0480 (15-89)||(8994-9069)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-89)||(38344-38432)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-89)||(22737-22825)
scaffold0008 (278-310)||(128095-128127)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-89)||(11821-11909)
[»] scaffold0359 (2 HSPs)
scaffold0359 (16-115)||(11740-11840)
scaffold0359 (15-89)||(1377-1451)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-89)||(7615-7703)
[»] scaffold0025 (2 HSPs)
scaffold0025 (13-89)||(146659-146735)
scaffold0025 (278-310)||(146906-146938)
[»] scaffold1164 (1 HSPs)
scaffold1164 (279-353)||(1701-1775)
[»] scaffold0207 (1 HSPs)
scaffold0207 (68-218)||(17812-17962)
[»] scaffold0122 (2 HSPs)
scaffold0122 (279-353)||(19807-19881)
scaffold0122 (279-353)||(24111-24185)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-89)||(85378-85466)
scaffold0014 (15-93)||(159359-159438)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-89)||(253102-253190)
scaffold0012 (278-310)||(247366-247398)
[»] scaffold0740 (1 HSPs)
scaffold0740 (21-115)||(4351-4445)
[»] scaffold1867 (1 HSPs)
scaffold1867 (15-89)||(204-278)
[»] scaffold0876 (1 HSPs)
scaffold0876 (279-349)||(94-164)
[»] scaffold0335 (1 HSPs)
scaffold0335 (68-218)||(5572-5722)
[»] scaffold0310 (4 HSPs)
scaffold0310 (279-353)||(6261-6335)
scaffold0310 (15-89)||(227-301)
scaffold0310 (19-89)||(6521-6591)
scaffold0310 (279-316)||(4-41)
[»] scaffold0190 (1 HSPs)
scaffold0190 (15-89)||(9997-10071)
[»] scaffold0049 (1 HSPs)
scaffold0049 (279-353)||(20493-20567)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-89)||(689-777)
[»] scaffold0118 (1 HSPs)
scaffold0118 (68-180)||(34442-34554)
[»] scaffold0023 (3 HSPs)
scaffold0023 (45-180)||(61256-61391)
scaffold0023 (278-310)||(48903-48935)
scaffold0023 (278-310)||(153924-153956)
[»] scaffold0158 (2 HSPs)
scaffold0158 (15-89)||(25018-25092)
scaffold0158 (15-89)||(25271-25345)
[»] scaffold0195 (1 HSPs)
scaffold0195 (16-89)||(631-704)
[»] scaffold0068 (2 HSPs)
scaffold0068 (13-94)||(48205-48286)
scaffold0068 (13-94)||(61653-61734)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-82)||(109582-109663)
scaffold0035 (1-89)||(118076-118164)
[»] scaffold0162 (2 HSPs)
scaffold0162 (72-180)||(11862-11970)
scaffold0162 (278-310)||(26340-26372)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-89)||(21558-21646)
scaffold0120 (1-89)||(31257-31345)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-93)||(33708-33800)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-89)||(4987-5075)
[»] scaffold0029 (1 HSPs)
scaffold0029 (68-180)||(49877-49989)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-89)||(112658-112746)
scaffold0022 (71-162)||(67997-68089)
[»] scaffold0173 (1 HSPs)
scaffold0173 (71-218)||(5338-5485)
[»] scaffold0160 (1 HSPs)
scaffold0160 (15-89)||(81-155)
[»] scaffold0367 (1 HSPs)
scaffold0367 (45-168)||(17355-17478)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-89)||(9033-9121)
[»] scaffold0117 (1 HSPs)
scaffold0117 (15-89)||(11681-11755)
[»] scaffold0615 (1 HSPs)
scaffold0615 (68-173)||(6252-6357)
[»] scaffold0833 (1 HSPs)
scaffold0833 (15-63)||(3359-3407)
[»] scaffold0031 (1 HSPs)
scaffold0031 (18-89)||(70676-70748)
[»] scaffold0317 (1 HSPs)
scaffold0317 (71-168)||(12637-12734)
[»] scaffold0601 (1 HSPs)
scaffold0601 (101-180)||(902-981)
[»] scaffold0095 (1 HSPs)
scaffold0095 (15-89)||(33840-33915)
[»] scaffold0413 (1 HSPs)
scaffold0413 (276-310)||(5990-6024)
[»] scaffold0058 (1 HSPs)
scaffold0058 (276-310)||(57392-57426)
[»] scaffold0468 (1 HSPs)
scaffold0468 (128-177)||(10992-11041)
[»] scaffold0013 (2 HSPs)
scaffold0013 (115-168)||(7112-7165)
scaffold0013 (294-351)||(35816-35873)
[»] scaffold0009 (2 HSPs)
scaffold0009 (116-181)||(244855-244920)
scaffold0009 (278-310)||(272330-272362)
[»] scaffold1500 (1 HSPs)
scaffold1500 (278-310)||(1431-1463)
[»] scaffold0761 (1 HSPs)
scaffold0761 (278-310)||(1492-1524)
[»] scaffold0498 (1 HSPs)
scaffold0498 (278-310)||(9183-9215)
[»] scaffold0383 (1 HSPs)
scaffold0383 (278-310)||(2700-2732)
[»] scaffold0302 (1 HSPs)
scaffold0302 (278-310)||(12418-12450)
[»] scaffold0266 (1 HSPs)
scaffold0266 (278-310)||(1430-1462)
[»] scaffold0141 (2 HSPs)
scaffold0141 (278-310)||(22857-22889)
scaffold0141 (278-310)||(27112-27144)
[»] scaffold0124 (1 HSPs)
scaffold0124 (278-310)||(1496-1528)


Alignment Details
Target: chr6 (Bit Score: 333; Significance: 0; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 35015366 - 35015014
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015366 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 35015267  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  35015266 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 35015167  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015166 ttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 35015067  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015066 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 35015014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 19983500 - 19983149
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||  |||||    
T  19983500 acaatatgactaaacaacaacaacaaccactaaccatgaaacatatcacaattcatcaacaatcatgcataattcactaattgagcatagtttt-aaact 19983402  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  19983401 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 19983302  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983301 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 19983202  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983201 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 19983149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 18583377 - 18583715
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatac 114  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18583377 caacaacaacatcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatac 18583476  T
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||| |    
T  18583477 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggt 18583576  T
Q  215 tcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaatta 314  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18583577 tcatgataatcacttattcccataatcaatgatgcatagaacaggagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaatta 18583676  T
Q  315 tctccaactattagctctagcttcacttttgctcctatg 353  Q
    || |||||||||| ||| |||||||||||||||||||||    
T  18583677 tcaccaactattaactcaagcttcacttttgctcctatg 18583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 26089793 - 26090091
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26089793 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 26089892  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  26089893 acattatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 26089992  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  26089993 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaatcaaatgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 18002693 - 18002395
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18002693 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcatcaattgagcataatttacaaactacccattttcat 18002594  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  18002593 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 18002494  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  18002493 gttcatgataatcacttatgcccataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 23994981 - 23995279
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23994981 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 23995080  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||| |||| |||||    
T  23995081 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaattccaaatattgg 23995180  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  23995181 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 15742417 - 15742120
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  15742417 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatatacaaattacccattttcat 15742318  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaa-catcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattg 211  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||    
T  15742317 acatcatgaacttgcaatttcatcatcaacaattcatttaatcatcaaattaacataatcaaacatatctctacaacataagcacgaatttcaaagattg 15742218  T
Q  212 gattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  15742217 ggttcatgataatcacttattctcataatcaattatgcat-gaacaagagaaaaagaattaaccaaaggattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 68 - 309
Target Start/End: Original strand, 4991186 - 4991427
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||||| |||||    
T  4991186 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaaat-aacat 4991284  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 266  Q
    || ||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  4991285 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataaaatcaagagaaaaa 4991384  T
Q  267 gaattaactaaatgattatgataaaaactaacccccttacctt 309  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  4991385 gaattaaacaaatgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 45 - 314
Target Start/End: Complemental strand, 15889871 - 15889601
Alignment:
Q  45 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||||||||||||||| ||| ||||||||| || |||| ||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  15889871 atcacaattcatcaacaac-atgtcataattcatcagttgaacataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaca 15889773  T
Q  144 attcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaa 243  Q
    | ||| ||| ||||||||||||||| ||||||||||| |||  | || |||||||||||||||| |||| ||||  |||||||| |||||  |||| ||     
T  15889772 aatcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacac 15889673  T
Q  244 ttatgcatagaacaagagaaaaagaattaactaaatgattatga-taaaaactaacccccttaccttaatta 314  Q
    |||||||||||| |||||| ||  |||||||||| ||||||||| | ||| ||||||||||||||| |||||    
T  15889672 ttatgcatagaaaaagagagaagaaattaactaagtgattatgattgaaatctaacccccttacctcaatta 15889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 45 - 314
Target Start/End: Complemental strand, 22585711 - 22585441
Alignment:
Q  45 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||||||| ||||||| ||| ||||||||  ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  22585711 atcacaattcaacaacaac-atgtcataattcttcaattgagcataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaca 22585613  T
Q  144 attcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaa 243  Q
    ||||| ||| ||||||||||| ||| ||||||||||| |||  | || ||||||||||||||||||||| ||||  ||||||||||||||  |||| ||     
T  22585612 attcaattatcatcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcac 22585513  T
Q  244 ttatgcatagaacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 314  Q
    |||||||||||| |||||| ||  || ||||||| ||||||||  | ||| ||||||||||||||| |||||    
T  22585512 ttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatctaacccccttacctcaatta 22585441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 45 - 314
Target Start/End: Complemental strand, 22590542 - 22590272
Alignment:
Q  45 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||||||| ||||||| ||| ||||||||  ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  22590542 atcacaattcaacaacaac-atgtcataattcttcaattgagcataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaca 22590444  T
Q  144 attcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaa 243  Q
    ||||| ||| ||||||||||| ||| ||||||||||| |||  | || ||||||||||||||||||||| ||||  ||||||||||||||  |||| ||     
T  22590443 attcaattatcatcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcac 22590344  T
Q  244 ttatgcatagaacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 314  Q
    |||||||||||| |||||| ||  || ||||||| ||||||||  | ||| ||||||||||||||| |||||    
T  22590343 ttatgcatagaaaaagagagaagaaactaactaagtgattatgcttgaaatctaacccccttacctcaatta 22590272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 44 - 286
Target Start/End: Complemental strand, 15005072 - 15004831
Alignment:
Q  44 tatcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaac 142  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||| ||||||| |||||||||||||||  ||||||||| ||| ||||||||| ||||||||    
T  15005072 tatcacaattcaacaacaac-atgtcataattcatcaattgaacataattcacaaactacccatttatatacatcataaacatgcaatttcctcatcaac 15004974  T
Q  143 aattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatca 242  Q
    |||||| | ||||||||||| ||||| ||||||||||| |||  | || ||||||||||||||||||||| ||||  |||||| |||||||  |||| ||    
T  15004973 aattcaatcaacatcaaatt-acatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatctcttattcaaataagca 15004875  T
Q  243 attatgcatagaacaagagaaaaagaattaactaaatgattatg 286  Q
     |||||||||||| |||||| ||  || ||||||| ||||||||    
T  15004874 cttatgcatagaaaaagagagaagaaactaactaagtgattatg 15004831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 25640694 - 25640456
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| |||||||||| |||| |||||||||||||||   |||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| |    
T  25640694 aattcatcaattgagcacaattcacaaactacccatttatctacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 25640595  T
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaat 270  Q
    |||||||||| |||  | || |||||||||||||||  |||| ||||  ||||||||||||||  |||| || |||||||||||| ||||||  |  |||    
T  25640594 caaacatatc-ctacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagtagaaat 25640496  T
Q  271 taactaaatgattatgataaaaactaacccccttacctta 310  Q
    || |||| |||||||||| ||  |||||||||||||||||    
T  25640495 tacctaagtgattatgatgaattctaacccccttacctta 25640456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25744414 - 25744331
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 84  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  25744414 acaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22440980 - 22441068
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||||| |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||    
T  22440980 acaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaaatcatgaacaacaatgcataattcaccaattgagcata 22441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32898836 - 32898924
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||  | |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  32898836 acaacatgactaaacaacaacaacttcaattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 32898924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13014910 - 13014822
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| |||| || ||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  13014910 acaacatgacttaacatcagcaacaacaattgatcttgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 13014822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 217
Target Start/End: Complemental strand, 32276902 - 32276756
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  32276902 aattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 32276803  T
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattca 217  Q
    ||||| |||| | |  | |  |||||||| |||||||||||| ||||    
T  32276802 caaacttatcaccaaaacaagagcacgaaattcaaagattgggttca 32276756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 18777204 - 18777280
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||    
T  18777204 aacaacaacaacattcattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacata 18777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 31628328 - 31628402
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  31628328 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 31628402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 19629447 - 19629556
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  19629447 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 19629546  T
Q  171 caaacatatc 180  Q
    ||||| ||||    
T  19629547 caaacttatc 19629556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 18570353 - 18570413
Alignment:
Q  29 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  18570353 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 18570413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 18432703 - 18432777
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||| || | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  18432703 caacaacatcatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 18432777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 16300122 - 16300010
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||| | |||||  |||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  16300122 cataatttatcaattaggcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16300023  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  16300022 actcaaacttatc 16300010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 18823529 - 18823417
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||| ||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  18823529 cataagtcatcaattaagcataacttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 18823430  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  18823429 actcaaacttatc 18823417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 18839384 - 18839272
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  | |||||||    
T  18839384 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcagttaacat 18839285  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  18839284 actcaaacttatc 18839272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 21931333 - 21931429
Alignment:
Q  84 agcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||||| ||||  |||||||||  | | ||||||||| ||||||||||||| |||||||||| ||| |||||| || | |||||||||||||||    
T  21931333 agcataattcacaatatacccatttatacatatcatgaacatgcaatttcatcaacaacaattcaattatcatcaatttcatatattcaaacatatc 21931429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 16106576 - 16106650
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | | |||||||||||| |||||||||||| ||||||| | | |||||||||||||| ||||||    
T  16106576 caacaacaacatcaaatgatcatgaaacttatcacaattcaacaacaacaaggtataattcaccaattaagcata 16106650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 26512260 - 26512349
Alignment:
Q  73 ttcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 162  Q
    |||| ||||||||||||||| |||||||||||||||  ||| ||||| ||| || ||||||| || ||||||||||  || |||||||||    
T  26512260 ttcatcaattgagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaatt 26512349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 26517376 - 26517465
Alignment:
Q  73 ttcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 162  Q
    |||| ||||||||||||||| |||||||||||||||  ||| ||||| ||| || ||||||| || ||||||||||  || |||||||||    
T  26517376 ttcatcaattgagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaatt 26517465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 17375018 - 17374924
Alignment:
Q  111 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaata-agcacgaatttcaa 205  Q
    ||||| ||||||| || |||||||||||||| |||||| ||| || ||||||| |||| ||||||||||| ||| ||| || ||||||||||||||    
T  17375018 atacaccatgaacatgtaatttcatcatcaataattcaattatcaacaaattagcatactcaaacatatcacta-caactagagcacgaatttcaa 17374924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 16086077 - 16086151
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | | |||||||||||| ||||| |||||| ||||||| | | |||||||||||||| ||||||    
T  16086077 caacaacaacatcaaatgatcatgaaacttatcataattcaacaacaacaaggtataattcaccaattaagcata 16086151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 1650053 - 1650020
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaa 311  Q
    |||||||||||||| |||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 19175311 - 19175376
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||||| |||||||| |||| |||||||||| ||| |||||| || | ||| |||||||||||    
T  19175311 atcatgaacatgcaattttatcaacaacaattcaattatcatcaattttatatactcaaacatatc 19175376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  294 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 16136423 - 16136487
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatat 179  Q
    ||||||||| |||||||||||||  ||| ||||| ||| |||||| || | ||||||||||||||    
T  16136423 atcatgaacatgcaatttcatcaaaaactattcaattatcatcaatttcatatattcaaacatat 16136487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 16232199 - 16232231
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  16232199 atgattatgataataactaacccccttacctta 16232231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 19610325 - 19610357
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  19610325 atgattatgataataactaacccccttacctta 19610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 31489 - 31137
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31489 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 31390  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  | ||||||||||||    
T  31389 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataagcacgaat 31290  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  31289 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaaactaaccc 31190  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31189 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 31137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 321; Significance: 0; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 41355 - 41707
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41355 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 41454  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  | ||||||||||||    
T  41455 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataagcacgaat 41554  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  41555 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaaactaaccc 41654  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41655 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 41707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 321; Significance: 0; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 22274768 - 22275120
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22274768 acaatatgactaaacatcaacaacaaccattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaaca 22274867  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  22274868 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaat 22274967  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  22274968 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaggctaaccc 22275067  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22275068 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 22275120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 22284001 - 22284353
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    |||||| ||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22284001 acaataagactaaacatcaaaaacaacgattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatttactaact 22284100  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||    
T  22284101 attcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacattaaattaacatattcaaacatatctctaccacataagcacgaat 22284200  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22284201 ttcaaagattgagttcatgataatcacttattctcataatcaaatatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccc 22284300  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22284301 ccttaccttaattatctccaactattagctctaacttcacttttgctcctatg 22284353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 9653093 - 9652796
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||| ||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9653093 aacaacatcaacatctattgatcatgaaaaatatcgcaattcatcaacaaccatgcataattcaccaattgagtataatttacaaactacccattttcat 9652994  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||||    
T  9652993 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaaagattgg 9652894  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9652893 gttcatgataatcacttattcccataatcaattatgcatagaacaagaaaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 21274246 - 21273949
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21274246 aacaacaacaacatctattgatcatgaaacatattacaattcatcaacaaccatgcataattcaccaattgagtataatttacaaactacccattttcat 21274147  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  21274146 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 21274047  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||    
T  21274046 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaatcaaatgattatgataaagactaa-ccccttacctta 21273949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 68 - 353
Target Start/End: Original strand, 15633327 - 15633612
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  15633327 cataattcatcaattaagcataatttcacaactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 15633426  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | |||||| |||| | |  | |  |||||||| |||||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15633427 actcaaacttatcaccaaaacaagagcacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaagagaaaaag 15633526  T
Q  268 aattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15633527 aattaactaagtgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatg 15633612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 68 - 309
Target Start/End: Original strand, 25213162 - 25213403
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| |||||||    
T  25213162 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacat 25213260  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 266  Q
    || ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25213261 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 25213360  T
Q  267 gaattaactaaatgattatgataaaaactaacccccttacctt 309  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  25213361 gaattaatcaaatgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23836906 - 23836791
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac- 99  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||     
T  23836906 acaaaatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttttcacaca 23836807  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  23836806 tacccattttcataca 23836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 310
Target Start/End: Original strand, 7321633 - 7321872
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||| ||| || ||||||||||| || |||||| ||| ||||||||||||||| |    
T  7321633 aattcatcaattgagcacaattcacaaactacccatttatatacatcataaacatgaaatttcatcataaaaaattcaattatcatcaaattaacatact 7321732  T
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaat 270  Q
    |||||||||| |||  | || |||||||||||||||  |||| ||||  ||| ||||||||||  |||| ||  ||||||||| | ||||||  |  |||    
T  7321733 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaatagtcacttattcaaataagcacgtatgcataggaaaagagagtagaaat 7321832  T
Q  271 taactaaatgattatgataaaaactaacccccttacctta 310  Q
    ||||||| ||||||| || ||  |||||||||||||||||    
T  7321833 taactaagtgattataatgaattctaacccccttacctta 7321872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 20627270 - 20627195
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20627270 atgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatg 20627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25876120 - 25876006
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| |||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| |     
T  25876120 acaacatgactaaacaataacaacaacatttgatcatgaagcatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca- 25876022  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  25876021 tacccattttcataca 25876006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32465904 - 32465992
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||| | |||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  32465904 acaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaagaacaatgcataattcaccaattgagcata 32465992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6879483 - 6879597
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||| ||| |     
T  6879483 acaacatgactaaataacaacaacaacaattgatcattaaacatatcacaattcatcaataacaatgcataattcaccaattgagtatattttcacaca- 6879581  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  6879582 tacccattttcataca 6879597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 19794661 - 19794586
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19794661 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatg 19794586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 43642913 - 43642838
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43642913 atgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatg 43642838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 232
Target Start/End: Original strand, 20279571 - 20279688
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggat 214  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||  ||||||||||||||| | || |||||||||||||| ||||   |    
T  20279571 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatacccaaacatatctctataacatgagcacgaatttcaacgattaagt 20279670  T
Q  215 tcatgataatcacttatt 232  Q
    |||  |||||||||||||    
T  20279671 tcaccataatcacttatt 20279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 180
Target Start/End: Original strand, 33128135 - 33128270
Alignment:
Q  45 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||    
T  33128135 atcacaattcaacaacaac-atgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaaca 33128233  T
Q  144 attcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||||| |||  |||||||||| |||||| ||||    
T  33128234 attcatttatcattcaattaacatactcaaacttatc 33128270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 271230 - 271304
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| |  ||||||||||||||||||||||    
T  271230 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 36890872 - 36890798
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||||||   |||||||||||||||| ||||||    
T  36890872 caacaacaacaacaattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaattaagcata 36890798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 24826860 - 24826748
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  24826860 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 24826761  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  24826760 actcaaacttatc 24826748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 25602084 - 25602158
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||| ||   |||||| ||||||||||||||||    
T  25602084 caacaacaacatcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgagcata 25602158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 28031380 - 28031230
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| ||   |||||||||    
T  28031380 cataattcatcaattaagcataatttcacaactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacat 28031281  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcat 218  Q
    | | |||| |||| | |  | |  |||||||| |||||||||||| |||||    
T  28031280 actaaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 28031230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28974095 - 28974183
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | |||||||||||||| || |||||||||||||||||   ||||||||| |||| ||||||||    
T  28974095 acaacatgacttagcaacaacaacatcaattgatcatgaaacttaccacaattcatcaacaacatagcataattcgccaaatgagcata 28974183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 4448320 - 4448246
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| ||||| |||||| ||||||| | |||| ||||||||||||| ||||    
T  4448320 caacaacaacatcaattgatcatgaaacttatcataattcaacaacaacaaagcatcattcaccaattgaacata 4448246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 17204445 - 17204550
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| ||||||||||||||  ||  |||||||||    
T  17204445 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatgatgcaattaacat 17204544  T
Q  168 attcaa 173  Q
    | ||||    
T  17204545 actcaa 17204550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 24341593 - 24341513
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    |||||||| |||| | ||||| |||||| |||||| ||||||| |||||||   ||| ||||||||||||||||| |||||    
T  24341593 aacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattt 24341513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 19666843 - 19666884
Alignment:
Q  273 actaaatgattatgataaaaactaacccccttaccttaatta 314  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  19666843 actaaatgattatgatgaattctaacccccttaccttaatta 19666884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaa 311  Q
    |||||||||||||| |||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 24571481 - 24571404
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||||| | |||||||||||| | || ||||||||| ||| |||   ||||||||| ||||||||||||||    
T  24571481 aacaacaacaacatcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgagcata 24571404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 25595168 - 25595245
Alignment:
Q  103 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||||| | || ||| || ||||||||||||| |||||||||||||| || |||||| |  || |||||||||||    
T  25595168 ccattttcacatattatggacatgcaatttcatcaacaacaattcatttatcaccaaattcatgtactcaaacatatc 25595245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  294 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 463043 - 463075
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 3798552 - 3798520
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  3798552 atgattatgataataactaacccccttacctta 3798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 8944153 - 8944185
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttacctta 8944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 12635817 - 12635785
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  12635817 atgattatgataataactaacccccttacctta 12635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 12641591 - 12641559
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  12641591 atgattatgataataactaacccccttacctta 12641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 12728699 - 12728731
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  12728699 atgattatgataataactaacccccttacctta 12728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 16935900 - 16935932
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  16935900 atgattatgataataactaacccccttacctta 16935932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 17006560 - 17006592
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  17006560 atgattatgataataactaacccccttacctta 17006592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 22863235 - 22863267
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  22863235 atgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 36982396 - 36982364
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  36982396 atgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 42177918 - 42177886
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  42177918 atgattatgataataactaacccccttacctta 42177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 4 - 353
Target Start/End: Complemental strand, 32494252 - 32493903
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32494252 atatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 32494153  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||| ||||||||||    
T  32494152 cattttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctacaacataaacacgaatttc 32494053  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32494052 aaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 32493953  T
Q  304 taccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32493952 taccttaattatctccaactattagctctagcttcacttttgctcctatg 32493903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 5 - 353
Target Start/End: Original strand, 126465 - 126813
Alignment:
Q  5 tatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactaccc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126465 tatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactaccc 126564  T
Q  105 attttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||    
T  126565 attttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctgcaacataagcacgaatttca 126664  T
Q  205 aagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccctt 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  126665 aagattgggttcatgataatcacttattctcataatcaattatgcatagaacaatagaaaaagaattaactaaatgattatgataaaaactaaccccctt 126764  T
Q  305 accttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  126765 accttaattatctccaactattagctctaacttcatttttgctcctatg 126813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 4 - 353
Target Start/End: Complemental strand, 111475 - 111126
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111475 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 111376  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  111375 cattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttc 111276  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  111275 aaatattgggttcatgataatcacttattttcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaaccccct 111176  T
Q  304 taccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  111175 taccttaattatcaccaacttttagctcaagcttcacttttgctcctatg 111126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 1937209 - 1936874
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    |||||||||||||||| ||||||||||||||||||||            ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1937209 acaatatgactaaacatcaacaacaaccattgatcat------------aattcatcaacaaccatacataattcaccaattgagcataatttacaaact 1937122  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    |||||||||     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  1937121 acccatttt-----atcatgaacttgcaatttcatcatgaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaat 1937027  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1937026 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacct 1936927  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  1936926 ccttaccttaattatctccaactattaactctagcttcacttttgcttctatg 1936874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 3 - 310
Target Start/End: Complemental strand, 42056496 - 42056188
Alignment:
Q  3 aatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactac 102  Q
    ||||| ||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42056496 aatatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattcacaaactac 42056397  T
Q  103 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaattt 202  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||    
T  42056396 ccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaattt 42056297  T
Q  203 caaagattggattcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccc 301  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||    
T  42056296 caaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccc 42056197  T
Q  302 cttacctta 310  Q
    |||||||||    
T  42056196 cttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 2028979 - 2029276
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    |||||| |||||| | |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2028979 aacaacgacaacatctattgatcatgaaacttatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacccattttcgt 2029078  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  2029079 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgg 2029178  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2029179 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaaaattaactaaatgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 2190383 - 2190085
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2190383 aacaacatcaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactatccattttcat 2190284  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  2190283 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 2190184  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  2190183 gtacatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaaaactaaccgccttacctta 2190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 3049641 - 3049937
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||    
T  3049641 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcataatttacaaactacccatattcat 3049740  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||||    
T  3049741 acatcatgaacttgcaatttcatcatcc-caattcatttaacatcaaattaacatattcaaacatatctctacaatataaacacgaatttcaaagattgg 3049839  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3049840 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 171 - 306
Target Start/End: Complemental strand, 15516901 - 15516765
Alignment:
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaa 269  Q
    ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15516901 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaa 15516802  T
Q  270 ttaactaaatgattatgataaaaactaacccccttac 306  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  15516801 ttaaccaaatgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 262
Target Start/End: Complemental strand, 39291648 - 39291457
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||| |    
T  39291648 aattcaccaattgagcataattcacaaactacccatttatatacatcatcaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatact 39291549  T
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagaga 262  Q
    |||||||||| |||  | || |||||||||||||||  || | ||||  ||||||||||||||  ||||  | |||||||||||| ||||||    
T  39291548 caaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatagaaaaagaga 39291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 308
Target Start/End: Original strand, 13352065 - 13352306
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||||||||||||| | | |||||||||||  ||||||||||||| |||||||||| ||||||||| |||  || ||||||||||||||    
T  13352065 cataattcatcaattgagcataattaaaatactacccatttatatacatcatgaacatgcaatttcaccatcaacaaatcaaatatcatcaaattaacat 13352164  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | | ||||||||| |||  | || |||||||||||||| | |||| ||||  ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  13352165 actgaaacatatcactacaacatgagcacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatagaaaaagagagaaga 13352264  T
Q  268 aattaactaaatgattatg-ataaaaactaacccccttacct 308  Q
    || ||| ||| ||||||||  | ||| |||||||||||||||    
T  13352265 aactaattaagtgattatgcttgaaatctaacccccttacct 13352306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 39046824 - 39046740
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 85  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39046824 acaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 39046740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 3060271 - 3060344
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3060271 atgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 44865288 - 44865391
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttca 111  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||| |||  | || ||||||||||||    
T  44865288 aacaacaacaacaacaattaatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcatattttcaacacatacccattttca 44865387  T
Q  112 taca 115  Q
    ||||    
T  44865388 taca 44865391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35094863 - 35094974
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| ||||||||||||||||| |||| |||||||||||||||| | ||||||||||||||||  |||||||||||||||||||||||| ||| ||| |     
T  35094863 acaacatgactaaacaacaacagcaac-attgatcatgaaacatttaacaattcatcaacaacagtgcataattcaccaattgagcatattttcacaca- 35094960  T
Q  100 tacccattttcata 113  Q
    ||||||||||||||    
T  35094961 tacccattttcata 35094974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 7283987 - 7283913
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatg 7283913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 47289832 - 47289942
Alignment:
Q  6 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-taccc 104  Q
    |||||| |||| ||||| |||| |||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||  | || |||||    
T  47289832 atgacttaacagcaacagcaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccc 47289931  T
Q  105 attttcataca 115  Q
    |||||||||||    
T  47289932 attttcataca 47289942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 143703 - 143800
Alignment:
Q  19 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 115  Q
    ||||||||| |||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  143703 aacaacaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacatacccattttcataca 143800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 3895083 - 3895159
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  3895083 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 3895159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12759033 - 12759121
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||||| |||||||||||||| ||||| |||||| |||||||   |||||||||||||||||||||||    
T  12759033 acaacatgacttaacaacaacaacaacaattgatcatgaaacttatcataattcaccaacaacatagcataattcaccaattgagcata 12759121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11287463 - 11287551
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | | |||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  11287463 acaacatgacttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 11287551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 15822618 - 15822544
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | ||||||||||||| |||||||||    
T  15822618 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccatttgagcata 15822544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 231
Target Start/End: Complemental strand, 15978004 - 15977820
Alignment:
Q  47 cacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaat 145  Q
    ||||||||| ||||||| ||| ||||||||| || ||||| |||||| |  || || |||| |  ||||| ||||||| ||||||||||||||||| |||    
T  15978004 cacaattcaacaacaac-atgtcataattcatcatttgagtataattcatcaagtatccatatatatacaccatgaacatgcaatttcatcatcaataat 15977906  T
Q  146 tcatttaacatcaaattaacatattcaaacatatctctatcaaata-agcacgaatttcaaagattggattcatgataatcacttat 231  Q
    ||| ||| || |||||||||||| ||||||||||| ||| ||| || |||| |||||||||| |||   ||||| ||||||||||||    
T  15977905 tcaattatcaacaaattaacatactcaaacatatcacta-caactagagcatgaatttcaaacatttagttcataataatcacttat 15977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 7284247 - 7284173
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | | |||||||||||||| ||||||    
T  7284247 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattaagcata 7284173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 12370027 - 12369953
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | ||| |||||||||  |||||||||||| ||||||| | |||||||||||||||||||||||    
T  12370027 caacaacaacatcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattcaccaattgagcata 12369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 26070451 - 26070377
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||    ||||||||||||||| ||||||    
T  26070451 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcata 26070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 26094238 - 26094164
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||    ||||||||||||||| ||||||    
T  26094238 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcata 26094164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 371203 - 371308
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  371203 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 371302  T
Q  168 attcaa 173  Q
    | ||||    
T  371303 actcaa 371308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 8563505 - 8563369
Alignment:
Q  45 atcacaattcatcaacaaccatgcataattca-ccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||| ||| ||||||||   || |||||| ||| |||||||||| | ||||  ||| |||||  ||| ||||||||| ||||||||||||| |||||    
T  8563505 atcacaaatcaacaacaacctaacacaattcatccatttgagcataactcacaatatactcatttatatatatcatgaacatgcaatttcatcaacaaca 8563406  T
Q  144 attcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||| ||| ||||||||| | ||| |||||||||||    
T  8563405 attcaattatcatcaaattcatatactcaaacatatc 8563369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 12248308 - 12248233
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| |||||||||||||| | |||||||||||| |||||||   ||||||||| ||||||||||||||    
T  12248308 caacaacaacatccattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 12248233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 45452353 - 45452305
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 63  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||    
T  45452353 caacaacaacgacaattgatcatgaaacttatcacaattcatcaacaac 45452305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 13274847 - 13274922
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||   ||||||||| ||||||||||||||    
T  13274847 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 13274922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 13377849 - 13377924
Alignment:
Q  276 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||| ||  ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  13377849 aaatgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 16570193 - 16570118
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||| ||||||| |||||||   ||||||||| ||||||||||||||    
T  16570193 caacaacaacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcata 16570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 16595469 - 16595544
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||| ||||||| |||||||   ||||||||| ||||||||||||||    
T  16595469 caacaacaacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcata 16595544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13863131 - 13863042
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||| ||| | ||||||||||||| ||||| ||||||   |||||||||||| |||||||   ||||||||| ||||||||||||||    
T  13863131 acaatatcacttagcaacaacaacaacaattgaacatgaatattatcacaattcaacaacaacatagcataattcaaccaattgagcata 13863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 49047861 - 49047786
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||    |||||||| ||||||||||||||    
T  49047861 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacataacataattcaaccaattgagcata 49047786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 15575920 - 15575874
Alignment:
Q  131 ttcatcatcaacaattcatttaacatcaaattaacatattcaaacat 177  Q
    |||||||||||||| | | |||||||||||||||||||| |||||||    
T  15575920 ttcatcatcaacaacttaattaacatcaaattaacatatccaaacat 15575874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 17984827 - 17984753
Alignment:
Q  131 ttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaa 205  Q
    |||||||||||||||||| ||| || ||||||||||||  |||||||||| |||  | |  ||||||||||||||    
T  17984827 ttcatcatcaacaattcaattatcaacaaattaacatacccaaacatatcactaaaacaagagcacgaatttcaa 17984753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  294 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 17223846 - 17223797
Alignment:
Q  294 ctaacccccttaccttaattatctccaactattagctctagcttcacttt 343  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  17223846 ctaacccccttaccttaattatcaccaattcttagcccaagcttcacttt 17223797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 25124445 - 25124482
Alignment:
Q  273 actaaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||||| || ||||||||||||||||||    
T  25124445 actaaatgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 13758677 - 13758709
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  13758677 atgattatgataataactaacccccttacctta 13758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 15862226 - 15862258
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  15862226 atgattatgataataactaacccccttacctta 15862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 15927875 - 15927907
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  15927875 atgattatgataataactaacccccttacctta 15927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 16212071 - 16212103
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  16212071 atgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 18151399 - 18151259
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggat 214  Q
    ||||||||| | ||| ||| |||||||||||||| ||| || ||||||||||||   || |||||| |||  | || |||||||||||||| | ||   |    
T  18151399 atcatgaacatacaaattcgtcatcaacaattcaattatcaacaaattaacatacctaatcatatcactacaacatgagcacgaatttcaacggttaagt 18151300  T
Q  215 tcatgataatcacttattctcataatcaattatgcatagaa 255  Q
    |||  ||||||||||||||  ||||  | ||||||||||||    
T  18151299 tcacaataatcacttattcaaataagaatttatgcatagaa 18151259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 18979970 - 18979938
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  18979970 atgattatgataataactaacccccttacctta 18979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 36052971 - 36053003
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  36052971 atgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 46474059 - 46474195
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt-gagcataatttacaaactacccattttca 111  Q
    ||||||||||||| | ||| | |||||| |  ||||||| ||| |||||||   ||| |||||| ||||| ||||| |||| ||||  ||| ||||| ||    
T  46474059 aacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaacaattagagcacaattaacaatatacacatttcca 46474158  T
Q  112 tacatcatgaacttgcaatttcatcatcaacaattca 148  Q
     | || |||||| ||||||||||||| ||||||||||    
T  46474159 catattatgaacatgcaatttcatcaacaacaattca 46474195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 314; Significance: 1e-177; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 4 - 353
Target Start/End: Original strand, 79913 - 80262
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  79913 atatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacc 80012  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  80013 cattttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctaccacataagcacaaatttc 80112  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  80113 aaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccccct 80212  T
Q  304 taccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  80213 taccttaattatctccaactattagctcaagcttcacttttgctcctatg 80262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 46226 - 46299
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  46226 aacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 46299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40704 - 40792
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||| ||| | ||||||||||| |||||||||||||||| |||||||||  | ||||||    |||||||||||||||||||||||    
T  40704 acaatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaacaacaatatagcataattcaccaattgagcata 40792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 313; Significance: 1e-176; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 21860057 - 21860409
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21860057 acaatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 21860156  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    || ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  21860157 actcattttcattcatcatgaacttgcaatttcatcattaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagtacgaat 21860256  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21860257 ttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaaactaaccc 21860356  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21860357 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 21860409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 4 - 352
Target Start/End: Complemental strand, 44035177 - 44034829
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44035177 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcataatttacaaactacc 44035078  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  | |||| || |||||||    
T  44035077 cattttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatatctacaacataaacaagaatttc 44034978  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44034977 aaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 44034878  T
Q  304 taccttaattatctccaactattagctctagcttcacttttgctcctat 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44034877 taccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 15861633 - 15861327
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15861633 acaatatgactaaacaa--acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 15861536  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  15861535 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 15861436  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  15861435 ttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaaccc 15861336  T
Q  301 ccttacctt 309  Q
    |||||||||    
T  15861335 ccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 22367065 - 22367296
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22367065 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcata-ttcaccaattgagcataatttacaaact 22367163  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  22367164 actcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 22367263  T
Q  201 ttcaaagattggattcatgataatcacttattc 233  Q
    |||||||||||| ||||||||||||||||||||    
T  22367264 ttcaaagattgggttcatgataatcacttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 41218667 - 41218803
Alignment:
Q  217 atgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatc 316  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttaccttaattatc 41218766  T
Q  317 tccaactattagctctagcttcacttttgctcctatg 353  Q
     |||||||||||||| |||||||||||||||||||||    
T  41218767 accaactattagctcaagcttcacttttgctcctatg 41218803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 41394527 - 41394602
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41394527 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatg 41394602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22403311 - 22403196
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac- 99  Q
    |||| |||||| |||||||||||||||  || |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | ||     
T  22403311 acaacatgacttaacaacaacaacaacagttaatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacaca 22403212  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  22403211 tacccattttcataca 22403196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 41212130 - 41212206
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  41212130 aacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacagtgcataattcactaattgagcata 41212206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 49967696 - 49967784
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  49967696 acaacatgacttaacaacaacaacatcaattgatcatgaaacgtatcacaattcatcaacaacaatgtataattcaccaattgagcata 49967784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 35522506 - 35522432
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  35522506 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 35522432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 27329944 - 27329868
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| |||||||||||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  27329944 aacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 27329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 35054814 - 35054890
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||| ||   |||||||||||||||||||||||    
T  35054814 aacaacaacaacatccattgatcatgaaacttatcacagttcatcaactacatagcataattcaccaattgagcata 35054890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 21718288 - 21718362
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||||||   |||||||||||||||||||||||    
T  21718288 caacaacaacatcaattgatcatgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcata 21718362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 20254430 - 20254539
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   ||| || ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  20254430 aattcatcaattaagcataatttcataacaactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 20254529  T
Q  171 caaacatatc 180  Q
    ||||| ||||    
T  20254530 caaacttatc 20254539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 21650181 - 21650076
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  21650181 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 21650082  T
Q  168 attcaa 173  Q
    | ||||    
T  21650081 actcaa 21650076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 351
Target Start/End: Original strand, 27675120 - 27675191
Alignment:
Q  280 gattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||  |||||||||||||||||||||||||||| |  |||| | ||||||||||| |||||||    
T  27675120 gattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcactttagctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 9784248 - 9784177
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||   |||||||| | |||||||||||||||| ||||||    
T  9784248 caacaacaacatcaattgatcatgaaacttatcacaat---tcaacaacaaagcataattcaccaattaagcata 9784177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 40436367 - 40436291
Alignment:
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    |||||||| | || |||||| ||||||||||||| |||||||||| ||| || ||| || | |||||||||||||||    
T  40436367 cattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatatattcaaacatatc 40436291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 45051726 - 45051759
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaa 311  Q
    |||||||||||||| |||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 9784287 - 9784239
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 63  Q
    ||||||||||| | ||||||| |||||| |||||||||||| |||||||    
T  9784287 caacaacaacatcaattgatcttgaaacttatcacaattcaacaacaac 9784239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 20194140 - 20194232
Alignment:
Q  71 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 162  Q
    |||||| ||||| ||||| |||| ||||  |||||||| ||| | || |||||| ||||||||||||| |||||||||| ||| || ||||||    
T  20194140 aattcaacaattagagcacaattcacaatatacccattatcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaaatt 20194232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 20445754 - 20445818
Alignment:
Q  29 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    |||||||| ||| |||| ||||||||| |||||||   ||| ||||||||||||||||| |||||    
T  20445754 attgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattt 20445818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 20531519 - 20531583
Alignment:
Q  29 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    |||||||| ||| |||| ||||||||| |||||||   ||| ||||||||||||||||| |||||    
T  20531519 attgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattt 20531583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 37844406 - 37844374
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  37844406 atgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 46523695 - 46523727
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  46523695 atgattatgataataactaacccccttacctta 46523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 312; Significance: 1e-176; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 6292 - 5941
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6292 acaatattactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 6193  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||  | ||||||||||||    
T  6192 acccattttcatacatcatgaacttgcaatttcatcattaacaaatcatttaacatcaaattaacatattcaaacacatctctacaacataagcacgaat 6093  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6092 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactatatgattatgatgaaaactaaccc 5993  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctat 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5992 ccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 164 - 352
Target Start/End: Complemental strand, 5923 - 5735
Alignment:
Q  164 acatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaa 263  Q
    ||||||||||||| |||||||  | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  264 aaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 352  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 309; Significance: 1e-174; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 25119416 - 25119064
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  25119416 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattgatcataatttacaaact 25119317  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  25119316 atccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaat 25119217  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    ||  |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  25119216 tttcaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaaactaactc 25119117  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25119116 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 25119064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 5682736 - 5682385
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682736 acaatatgaataaaaaacaacaacaaccaataatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 5682637  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  5682636 acccaatttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaat 5682537  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  5682536 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaggaaaa-aattaactaaatgattatgataaaaactaaccc 5682438  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
     ||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  5682437 acttaccttaattatcaccaactattagctcatgcttcacttttgctcctatg 5682385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 14951808 - 14952117
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14951808 acaatatgactaaataacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 14951907  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  14951908 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 14952007  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14952008 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccc 14952107  T
Q  301 ccttacctta 310  Q
    ||||||||||    
T  14952108 ccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 15272509 - 15272211
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272509 aacaacaacaacatctattgatcatggaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 15272410  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  15272409 acatcatgaacttgcaatttcatcatcaaccattcgtttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 15272310  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  15272309 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 79 - 314
Target Start/End: Original strand, 19559483 - 19559719
Alignment:
Q  79 aattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacata 178  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  19559483 aattgagcataattcacaaactacccatttacatacatcatgaacatgcaatttcatcatcaacaattcaattaacatcaaattaacatgctcaaacata 19559582  T
Q  179 tctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaa 278  Q
    || |||  | || |||| ||||||||||  |||| | ||| ||||||||||||||  |||| || |||||||||||| |||||| ||  ||||||||||     
T  19559583 tcactacaacatgagcaggaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaattaactaat 19559682  T
Q  279 tgattatg-ataaaaactaacccccttaccttaatta 314  Q
    ||||||||  | ||| ||||||||||||||| |||||    
T  19559683 tgattatgcttgaaatctaacccccttacctcaatta 19559719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 15136010 - 15135907
Alignment:
Q  208 attggattcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttac 306  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  307 ctta 310  Q
    ||||    
T  15135910 ctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 53704934 - 53704846
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53704934 acaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 53704846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 351
Target Start/End: Complemental strand, 34177781 - 34177502
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||||||||||| |||||||  ||| ||||||||||  ||||||||||||| |||||||| ||||||||||||||| ||| |||  |||||||||    
T  34177781 cataattcaccaattgaacataattctcaa-ctacccatttatatacatcatgaacatgcaattttatcatcaacaattcaattatcatgtaattaacat 34177683  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | ||||||||||| |||  | || |||||||||||  |||||||||||||  ||||||||||||||   ||| || |||| |||| |||||  ||||       
T  34177682 actcaaacatatcactacaacatgagcacgaattttcaagattggattcacaataatcacttattcaattaagcacttattcatacaacaaatgaaa--- 34177586  T
Q  268 aatta-actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||| |||||||||||||||| ||  |||| |||||||||||| |||  || |     |||||||||||||||||| |||||||    
T  34177585 aattacactaaatgattatgatgaattctaa-ccccttaccttagttagatcaattccctagctctagcttcactttagctccta 34177502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 49071800 - 49071994
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| |||||||||||| || |  || ||  ||| | |||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  49071800 cataattcatcaattgagcatatttcatcaagtattcatatacatatatcatgaacatgcaatttcatcatcaataattcaattaacatcaaattaacat 49071899  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagaga 262  Q
    | ||||||||||| |||  | || |||||||||||||| | |||| ||||  || |||||||||||  |||| || |||||||||||| ||||||    
T  49071900 actcaaacatatcactacaatatgagcacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcatagaaaaagaga 49071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 8872660 - 8872584
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  8872660 aacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaacgcataattcaccaattgagcata 8872584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 30457954 - 30458037
Alignment:
Q  6 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  30457954 atgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcgtaattcaccaattgagcata 30458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 54118200 - 54118125
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54118200 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatg 54118125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 820102 - 820029
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  820102 aacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 820029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 34395317 - 34395418
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcata 113  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||    
T  34395317 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcata 34395416  T
Q  114 ca 115  Q
    ||    
T  34395417 ca 34395418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21959664 - 21959576
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  21959664 acaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 21959576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 44346881 - 44346961
Alignment:
Q  9 actaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  44346881 actaaacaacaacaacaacatttgatcatgaaacatatcacaattcatgaacaacaatgtataattcaccaattgagcata 44346961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44055961 - 44056049
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| ||| |||||| ||||||||| | |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  44055961 acaacatggctaaaccacaacaacatcaattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 44056049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 55376786 - 55376714
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 85  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  55376786 aacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgtataattcaccaattgag 55376714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23270135 - 23270020
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac- 99  Q
    |||| |||||| ||||||||||||| | ||||||||||| || |||||||||||||||||||| |||||||||||| |||||||| ||| |||  | ||     
T  23270135 acaacatgacttaacaacaacaacatcaattgatcatgatacttatcacaattcatcaacaacaatgcataattcatcaattgagtatattttcaacaca 23270036  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  23270035 tacccattttcataca 23270020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 53907883 - 53907812
Alignment:
Q  18 caacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  53907883 caacaacaacaattgatcatgaaacatttcacaattcatcaacaacaatgcataattcaccaattgggcata 53907812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 14500358 - 14500208
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  ||||||||| ||| |||||||||| ||| ||||||||||    
T  14500358 cataattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaataattcatttatcattaaattaacat 14500259  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcat 218  Q
    | |||||| |||| | |  | |  |||||||| |||||||||||| |||||    
T  14500258 actcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 14500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16732215 - 16732303
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||| ||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  16732215 acaacatgacttagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 16732303  T

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Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 30232685 - 30232609
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| |||||||||||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  30232685 aacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 30232609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 12837389 - 12837313
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| ||||||| |||||||| |||||||||| | |||||||   |||||||||||||||||||||||    
T  12837389 aacaacaacaacatccattgaccatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 12837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 14996241 - 14996353
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| ||||||||| |||| |||  |||||||||    
T  14996241 cataattcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcttttatcattcaattaacat 14996340  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  14996341 actcaaacttatc 14996353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 16522932 - 16523044
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  16522932 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16523031  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  16523032 actcaaacttatc 16523044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 21417471 - 21417536
Alignment:
Q  119 tgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctcta 184  Q
    ||||| || ||||||||||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  21417471 tgaacatgaaatttcatcatcaacaattcaattatcaacaaattcacatattcaaacatatctcta 21417536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 8045058 - 8045170
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| ||||||| |||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  8045058 cataagtcatcaattaagcataatttcacaacaacccattctcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 8045157  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  8045158 actcaaacttatc 8045170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 9295808 - 9295920
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||| | |||||||||||||| |||  |||||||||    
T  9295808 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcattaccaacaattcatttatcattcaattaacat 9295907  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  9295908 actcaaacttatc 9295920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 45459042 - 45458968
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||| ||||||||| |||||||||||| ||||| | | |||||||||||||||||| ||||    
T  45459042 caacaacaacatcaattggtcatgaaacttatcacaattcaacaacagcaaagcataattcaccaattgaacata 45458968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 32460820 - 32460743
Alignment:
Q  97 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaa 174  Q
    |||||||| ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||    
T  32460820 aactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaa 32460743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 9795330 - 9795442
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||||||||| | ||||||||   |||||| |||||| | |||| |||||| ||  ||||||||| ||| |||||||||| |||  |||||||||    
T  9795330 cataattcaccaattaaacataatttcacaactactcattttgacacattatgaacatgttatttcatcaccaagaattcatttatcattcaattaacat 9795429  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  9795430 actcaaacttatc 9795442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 12133686 - 12133631
Alignment:
Q  125 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||  ||||||||||    
T  12133686 tgcaatttcatcattaacaattcaattaacaacaaattaacatacccaaacatatc 12133631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 10104452 - 10104374
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    ||||||||||| | ||||| |||||| |||||| ||||||| |||||||   ||| ||||||||||||||||| |||||    
T  10104452 caacaacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattt 10104374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 15675293 - 15675213
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    |||||||| |||| | ||||| |||||| |||||| ||||||| |||||||   ||| ||||||||||||||||| |||||    
T  15675293 aacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattt 15675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 31115688 - 31115768
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    |||||||| |||| | ||||| |||||| |||||| ||||||| |||||||   | | |||||||||||||||||||||||    
T  31115688 aacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattt 31115768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 52265708 - 52265628
Alignment:
Q  2 caatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 82  Q
    |||||| ||| | ||||||||||| | ||||| |||||| | |||||||||||| |||||||  ||||||||||| |||||    
T  52265708 caatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacattgcataattcaacaatt 52265628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 13809697 - 13809622
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||   ||||||||| || |||||||||||    
T  13809697 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaactaattgagcata 13809622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 16225301 - 16225211
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 162  Q
    |||||| ||||||||||||||| |||||||||||||||  |||  |||||||| || ||||| | || ||||||||||  || |||||||||    
T  16225301 aattcatcaattgagcataattcacaaactacccatttatata-ttcatgaacatgtaatttaaacaacaacaattcaaataccatcaaatt 16225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 41165883 - 41165808
Alignment:
Q  276 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||| ||  ||||||||||||| ||||||||| |||| |  |||| | ||||||||||| |||||||    
T  41165883 aaatgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 15044888 - 15044966
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaa-ttgagcataatt 92  Q
    ||||||||||| | ||||| |||||| | |||||||||||| |||||||   |||||||||| ||| ||||||||||||    
T  15044888 caacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcatcaatttgagcataatt 15044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 19697514 - 19697408
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||| || |||| |||||||| |||||| ||  ||||||| |  ||||||||||||| |||  |||||||||    
T  19697514 cataattcatcaattaagcataatttcataacaactcattctcatacattatgaacatgttatttcataactaacaattcatttatcattcaattaacat 19697415  T
Q  168 attcaaa 174  Q
    | |||||    
T  19697414 actcaaa 19697408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 19708099 - 19707993
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||| || |||| |||||||| |||||| ||  ||||||| |  ||||||||||||| |||  |||||||||    
T  19708099 cataattcatcaattaagcataatttcataacaactcattctcatacattatgaacatgttatttcataactaacaattcatttatcattcaattaacat 19708000  T
Q  168 attcaaa 174  Q
    | |||||    
T  19707999 actcaaa 19707993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 40885756 - 40885678
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    ||||||||||| | ||||| |||||| |||||| ||||||| ||| |||   ||| | |||||||||||||||||||||    
T  40885756 caacaacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt 40885678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 14996445 - 14996478
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaa 311  Q
    ||||||||||||| ||||||||||||||||||||    
T  14996445 atgattatgataataactaacccccttaccttaa 14996478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 7132014 - 7131982
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  7132014 atgattatgataataactaacccccttacctta 7131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 13246737 - 13246769
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  13246737 atgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 15287194 - 15287162
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  15287194 atgattatgataataactaacccccttacctta 15287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 15294303 - 15294271
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  15294303 atgattatgataataactaacccccttacctta 15294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 17145606 - 17145574
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  17145606 atgattatgataataactaacccccttacctta 17145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 20001030 - 20001062
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  20001030 atgattatgataataactaacccccttacctta 20001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 17956193 - 17955837
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  17956193 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgagtataatttacaaact 17956094  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  17956093 actcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcagacatatctctaccacataagcacgaat 17955994  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17955993 ttcaaagattgggttcatgataatcacttattctcataatcgattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccc 17955894  T
Q  301 ccttaccttaattatctccaactattagct----ctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  17955893 ccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatg 17955837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 4 - 353
Target Start/End: Original strand, 7854031 - 7854380
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || || |    
T  7854031 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgaacataatttaccaattatc 7854130  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  7854131 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttc 7854230  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7854231 aaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaaccccct 7854330  T
Q  304 taccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  7854331 taccttaattatcaccaactattagctcaagcttcacttttgctcctatg 7854380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 4 - 353
Target Start/End: Original strand, 45581680 - 45582029
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45581680 atatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacc 45581779  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  | |||||||||||||||    
T  45581780 cattttcatacatcatgaacttgcaatttcatcatcaacaattcattaatcatcaaattaacatattcaaacatatctctacaacataagcacgaatttc 45581879  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaa-ccccc 302  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45581880 aaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccc 45581979  T
Q  303 ttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  45581980 ttaccttaattatctccaactattagctctagcttca-tttttctcctatg 45582029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 4 - 353
Target Start/End: Complemental strand, 54038330 - 54037981
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54038330 atatgactaaacaacaacaacaaccattaatcatgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcataatttacaaactacc 54038231  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||||||||| ||    
T  54038230 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaatataagcacgaatgtc 54038131  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54038130 aaacattgagttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 54038031  T
Q  304 taccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  54038030 taccttaattatcaccaactattagctcaagcttcacttttgctcctatg 54037981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 30152988 - 30153297
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30152988 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 30153087  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  30153088 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 30153187  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30153188 ttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaattaaatgattatgataaaaactaaccc 30153287  T
Q  301 ccttacctta 310  Q
    ||||||||||    
T  30153288 ccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 3992608 - 3992948
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3992608 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcct 3992707  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||||||| |||     
T  3992708 acatcatgaacctgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaaggttga 3992807  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 312  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3992808 gttcatgataattacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 3992907  T
Q  313 tatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3992908 tatctccaactattagctctagcttcacttttgctcctatg 3992948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 2844249 - 2844589
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2844249 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaagaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 2844348  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||||  | ||||||||||||||||||||||||    
T  2844349 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaaaatctacaacataagcacgaatttcaaagattgg 2844448  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 312  Q
     |||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2844449 gttcatgataatcgcttattcccataatcaattatgcatagaataagagaaaaagaatcaactaaatgattatgataaaaactaacccccttaccttaat 2844548  T
Q  313 tatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  2844549 tatctcaaactattagctctagcttcacttttgctcctatg 2844589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 4 - 309
Target Start/End: Complemental strand, 54685507 - 54685202
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54685507 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttaccaactacc 54685408  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  54685407 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttc 54685308  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||| ||    
T  54685307 aaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaagactaacccact 54685208  T
Q  304 tacctt 309  Q
    ||||||    
T  54685207 tacctt 54685202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 4 - 310
Target Start/End: Original strand, 33341930 - 33342236
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33341930 atatgactaaacaacaacaacaaccattgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgagcataatttaccaactacc 33342029  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  33342030 cattttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatctctaccacattagcacgaatttc 33342129  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||    
T  33342130 aaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaaccctct 33342229  T
Q  304 tacctta 310  Q
    |||||||    
T  33342230 tacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 53771099 - 53771397
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771099 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 53771198  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  53771199 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 53771298  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  53771299 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 23492431 - 23492728
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  23492431 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatccataattcaccatttgagcataatttacaaactacccattttcat 23492530  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||| ||||||||||||||||    
T  23492531 acatcatgaacttgcaatttcataatcaacaattcatttaacatcaaattaacacattcaaacatatctctacaacataagcaagaatttcaaagattgg 23492630  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23492631 gttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 16261511 - 16261809
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16261511 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcgt 16261610  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  16261611 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 16261710  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  16261711 gttcatgataatcacttattctcataatcaattacgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 38167972 - 38168269
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| ||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  38167972 aacaacaacaacatctattgatcatgaaacttattacaattcatcaacaacatagcataattcaccaattgagcataatttacaaactacccattttcat 38168071  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||| ||||||||||||||||||    
T  38168072 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatttctacaacataagtacgaatttcaaagattgg 38168171  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  38168172 gttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 91 - 353
Target Start/End: Original strand, 55513006 - 55513268
Alignment:
Q  91 tttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaat 190  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  | ||    
T  55513006 tttacaaactacccattttcatacatcattaacttgcaatttcatcatcaacaattcatttaacatcgaattaacatattcaaacatatctctacaacat 55513105  T
Q  191 aagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataa 290  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55513106 aagcacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataa 55513205  T
Q  291 aaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55513206 aaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 55513268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 55 - 310
Target Start/End: Original strand, 28558271 - 28558526
Alignment:
Q  55 atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaac 154  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  28558271 atcaacaaccatgcataattcaccaattgagcatcatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttatc 28558370  T
Q  155 atcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcataga 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||    
T  28558371 atcaaattaacatattcaaacatatctctatcacataagcacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatgga 28558470  T
Q  255 acaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28558471 acaagagaaaaagaattaactaaatgattatgataaaaactaaccctcttacctta 28558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 68 - 310
Target Start/End: Original strand, 18970034 - 18970277
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  18970034 cataattcatcaattgagcataattcacaaactacccatttacatacatcatgaacatgaaatttcatcatcaacaattcaattaacatcaaattaacat 18970133  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | | ||||||||| |||  | || ||||||||||||||||||||| ||||| ||||||||||||||  ||||||| |||||||||||| |||||||||      
T  18970134 acttaaacatatcactacaacatgagcacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcatagaaaaagagaaaaga 18970233  T
Q  268 aattaactaaatgattatga-taaaaactaacccccttacctta 310  Q
    || ||||||| || |||||| | ||| |||||||||||||||||    
T  18970234 aactaactaagtggttatgattgaaatctaacccccttacctta 18970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 71 - 343
Target Start/End: Original strand, 15550714 - 15550986
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| |    
T  15550714 aattcatcaattgagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 15550813  T
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaat 270  Q
    |||||||||| |||  | || |||||||||||||||  |||| ||||  ||||||||||||||  || | || ||||||||| ||  |||||  |  |||    
T  15550814 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaattagcacttatgcataaaaagagagagtagaaat 15550913  T
Q  271 taactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 343  Q
    ||||||| |||||||||| ||  |||||||||||| |||||||||| |||| |  |||| | |||||||||||    
T  15550914 taactaagtgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttt 15550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 48421690 - 48421855
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||||||||||| |||||||  ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||    
T  48421690 cataattcaccaattgaacataattctcaaactacccatttatatacatcatgaacatgcaatttcatcaccaacaattcaattatcatcaaattaacat 48421789  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattc 233  Q
    | ||||||||||| |||  | || |||| |||||||||||||||| ||||  ||||||||||||||    
T  48421790 actcaaacatatcactacaacatgagcatgaatttcaaagattgggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16996260 - 16996172
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16996260 acaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 16996172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 317709 - 317621
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  317709 acaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaatttagcata 317621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19570889 - 19570801
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  19570889 acaacatgactaaacaacaacaacaacaattgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata 19570801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 50112252 - 50112164
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  50112252 acaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 50112164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12349931 - 12349843
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  12349931 acaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaactacgatgcataattcaccaattgagcata 12349843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 19232089 - 19232164
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19232089 atgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatg 19232164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 22144461 - 22144358
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttca 111  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||  | || ||||||||||||    
T  22144461 aacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcatacttcaccaattgagcatattttcaacacatacccattttca 22144362  T
Q  112 taca 115  Q
    ||||    
T  22144361 taca 22144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6154532 - 6154419
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac- 99  Q
    |||| |||||| ||||| ||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| |||  | ||     
T  6154532 acaacatgacttaacaataacaacaacaattgatcatgaaacttatcacaattcatcaataacaatgcataattcaccaattgagcatattttcaacaca 6154433  T
Q  100 tacccattttcata 113  Q
    ||||||||||||||    
T  6154432 tacccattttcata 6154419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6146947 - 6146832
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac- 99  Q
    |||| |||||| |||||||||| |||| ||||| |||||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||  | ||     
T  6146947 acaacatgacttaacaacaacagcaacaattgaccatgaaacttatcacaattcatcaacaacaatgcatgattcaccaattgagcatattttcaacaca 6146848  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  6146847 tacccattttcataca 6146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 15857195 - 15857120
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  15857195 atgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13817561 - 13817646
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| ||||||||||||||||||||   |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  13817561 acaacatgactaaacaacaacaaca---attgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata 13817646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16182146 - 16182032
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| ||||||||| |||||||||||| ||||||||| |||| ||||||||||||||||| || ||||||||||||||||||  ||||| ||| ||| |     
T  16182146 acaacatgactaaaaaacaacaacaacaattgatcattaaacttatcacaattcatcaacgacaatgcataattcaccaatttggcatattttcacaca- 16182048  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  16182047 tacccattttcataca 16182032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 16744073 - 16743998
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16744073 atgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatg 16743998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 12349726 - 12349652
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  12349726 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 12349652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 53898642 - 53898541
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcata 113  Q
    |||||||||||   |||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||    
T  53898642 caacaacaacattaattgatcatgaaacttatcacaatgcaacaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcata 53898543  T
Q  114 ca 115  Q
    ||    
T  53898542 ca 53898541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 17100711 - 17100787
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||| |||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  17100711 aacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 17100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 17101396 - 17101472
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||| |||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  17101396 aacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 17101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 19261028 - 19260952
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||   | |||||||||||||||||||||    
T  19261028 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacttagtataattcaccaattgagcata 19260952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 117 - 263
Target Start/End: Original strand, 11402752 - 11402898
Alignment:
Q  117 catgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattc 216  Q
    ||||||| || |||||||||| |||||||||| ||| ||||||||| | ||| ||||||||||| |||| | || ||||||||||||||  |||   |||    
T  11402752 catgaacatgaaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcactataatatgagcacgaatttcaacaattaagttc 11402851  T
Q  217 atgataatcacttattctcataatcaattatgcatagaacaagagaa 263  Q
    |  ||||||||||||||  |||| || || |||||||||| ||||||    
T  11402852 acaataatcacttattcaaataagcacttgtgcatagaactagagaa 11402898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 34439513 - 34439451
Alignment:
Q  32 gatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattta 94  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  34439513 gatcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgagcatatttta 34439451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 35123756 - 35123830
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| ||||||||||||  |||||| | |||||||||||||||||||||||    
T  35123756 caacaacaacatcaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 35123830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 54424076 - 54424146
Alignment:
Q  19 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  54424076 aacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 54424146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 8275986 - 8275874
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| | |  |||||||||    
T  8275986 cataattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcgttcaattaacat 8275887  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  8275886 actcaaacttatc 8275874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 9303241 - 9303129
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  9303241 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 9303142  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  9303141 actcaaacttatc 9303129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 14285075 - 14285187
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| |||||| |||   |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  14285075 cataattcatcaattaagcatattttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 14285174  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  14285175 actcaaacttatc 14285187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 14298485 - 14298555
Alignment:
Q  19 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||| | |||||||||||||| |||||||||||  ||||||| | |||||||||||||||||||||||    
T  14298485 aacaacatcaattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcata 14298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 14304112 - 14304182
Alignment:
Q  19 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||| | |||||||||||||| |||||||||||  ||||||| | |||||||||||||||||||||||    
T  14304112 aacaacatcaattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcata 14304182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 17523076 - 17523002
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||| |||   |||||||||||||||||||||||    
T  17523076 caacaacaacatcaattggtcatgaaacttatcacaattcatcaataacatagcataattcaccaattgagcata 17523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 19946812 - 19946918
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   |||||| ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  19946812 cataaatcatcaattaagcataatttcacaactactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 19946911  T
Q  168 attcaaa 174  Q
    | |||||    
T  19946912 actcaaa 19946918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 14177105 - 14177040
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||||| |||||| | |||||||||    
T  14177105 atcatgaacatgcaatttcatcatcaacaattcaattatcatcaaatgaacatactgaaacatatc 14177040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 16934115 - 16934010
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  16934115 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16934016  T
Q  168 attcaa 173  Q
    | ||||    
T  16934015 actcaa 16934010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 8268886 - 8268774
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||| ||| |||||||||||| |||||| ||  ||||||||| |||||||||||||| | |  |||||||||    
T  8268886 cataattcatcaattaagcataatttcataacaaccaattttcatacattatgaacatgttatttcatcaccaacaattcatttatcgttcaattaacat 8268787  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  8268786 actcaaacttatc 8268774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 255
Target Start/End: Original strand, 17393590 - 17393735
Alignment:
Q  111 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaata-agcacgaatttcaaagat 209  Q
    ||||| ||||||| |||||||||||| |||| |||||| ||| || ||||||||||||  |||||||||| ||| ||| || ||||||||||||||  ||    
T  17393590 atacagcatgaacatgcaatttcatcgtcaataattcaattatcaacaaattaacatacccaaacatatcacta-caactagagcacgaatttcaacaat 17393688  T
Q  210 tggattcatgataatcacttattctca--taatcaattatgcatagaa 255  Q
    |   ||||| ||||||||||| |||||  ||| |||||||||||||||    
T  17393689 taagttcataataatcactta-tctcaattaagcaattatgcatagaa 17393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 12539156 - 12539066
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaa 205  Q
    ||||||||| |||||||||||||||||||||||| ||| || |||||| ||||| |||| |||||| |||  | |  ||||||||||||||    
T  12539156 atcatgaacatgcaatttcatcatcaacaattcaattatcaacaaattcacatactcaaccatatcactaaaacaagagcacgaatttcaa 12539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 12560423 - 12560362
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 76  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||   ||||||||||    
T  12560423 caacaacaacatccattgatcatgaatcatatcacaattcaacaacaacatagcataattca 12560362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 14295499 - 14295573
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    |||||||||| | |||||||||||| | |||||||||||| |||||||   ||||||||| ||||||||||||||    
T  14295499 aacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 14295573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 14301126 - 14301200
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    |||||||||| | |||||||||||| | |||||||||||| |||||||   ||||||||| ||||||||||||||    
T  14301126 aacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 14301200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 37915361 - 37915290
Alignment:
Q  134 atcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaata-agcacgaatttcaa 205  Q
    ||||||||||||||| |||||| ||||||||||||  |||||||||| ||| ||| || ||||||||||||||    
T  37915361 atcatcaacaattcaattaacaacaaattaacatacccaaacatatcacta-caactagagcacgaatttcaa 37915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 38375798 - 38375718
Alignment:
Q  100 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    |||||||||||| | || |||||| ||||||||||||  |||||||||| ||| ||||||||| |  || |||||||||||    
T  38375798 tacccattttcacaaattatgaacatgcaatttcatctacaacaattcaattatcatcaaattcatgtactcaaacatatc 38375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 11329148 - 11329081
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 82  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||   |||||||||| |||||    
T  11329148 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaacaatt 11329081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 14528199 - 14528124
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||   |||| |||| ||||||||||||||    
T  14528199 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcata 14528124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 17139568 - 17139643
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||   |||| |||| ||||||||||||||    
T  17139568 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcata 17139643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 38810943 - 38810868
Alignment:
Q  276 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||| ||  ||||||||||||||||| ||||| |||| |  |||| | ||||||||||| |||||||    
T  38810943 aaatgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 10913001 - 10913111
Alignment:
Q  71 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatat 169  Q
    |||||| ||||| ||||| |||| ||||  |||||||||||| | || ||| || ||||||||||||| |||||||||| ||| || |||||| |  ||     
T  10913001 aattcaacaattagagcacaattcacaatatacccattttcacatattatggacatgcaatttcatcaacaacaattcaattatcaccaaattcatgtac 10913100  T
Q  170 tcaaacatatc 180  Q
    |||||||||||    
T  10913101 tcaaacatatc 10913111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 12488913 - 12488835
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaa-ttgagcataatt 92  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||    ||||||||| ||| ||||||||||||    
T  12488913 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacataacataattcatcaatttgagcataatt 12488835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 351
Target Start/End: Complemental strand, 13301401 - 13301323
Alignment:
Q  273 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    |||||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | ||||||||||| |||||||    
T  13301401 actaaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 351
Target Start/End: Complemental strand, 13312057 - 13311979
Alignment:
Q  273 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    |||||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | ||||||||||| |||||||    
T  13312057 actaaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 15615137 - 15615170
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaa 311  Q
    |||||||||||||| |||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  294 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 39656453 - 39656494
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccatttt 109  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  39656453 cataattcaccaattgaatataattcacaaactacccatttt 39656494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 51961068 - 51961031
Alignment:
Q  273 actaaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||||| || ||||||||||||||||||    
T  51961068 actaaatgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 2050115 - 2050147
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  2050115 atgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 8268682 - 8268650
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttacctta 8268650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 8275782 - 8275750
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttacctta 8275750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 11477332 - 11477220
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||| ||| |||||| ||  |||| || | | |||| ||||||| |||  |||||||||    
T  11477332 cataattcatcaattaagcataatttcacaacaacccattttcatgcattatgaacatgttattttattaaccacaaatcatttatcattcaattaacat 11477233  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  11477232 actcaaacttatc 11477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 14842519 - 14842487
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  14842519 atgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 18911300 - 18911332
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  18911300 atgattatgataataactaacccccttacctta 18911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 19260781 - 19260749
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  19260781 atgattatgataaagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 38527841 - 38527889
Alignment:
Q  67 gcataattcaccaattgagcataatttacaaactacccattttcataca 115  Q
    ||||||||||||||||||||||| ||| | |  ||||||||||||||||    
T  38527841 gcataattcaccaattgagcatattttcccacatacccattttcataca 38527889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 301; Significance: 1e-169; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 162388 - 162036
Alignment:
Q  1 acaatatgactaaacaa-caacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  162388 acaatatgactaaacaaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataatttacaaac 162289  T
Q  100 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaa 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||  | |||||||||||    
T  162288 tacccatttacatacatcatgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacataagcacgaa 162189  T
Q  200 tttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacc 299  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  162188 tttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaaaactaacc 162089  T
Q  300 cccttaccttaattatctccaactattagctctagcttcacttttgctcctat 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162088 cccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 16 - 353
Target Start/End: Complemental strand, 166458 - 166121
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcataca 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  166458 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataatttacaaactacccatttacataca 166359  T
Q  116 tcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggatt 215  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||  | |||||||||||||||||||||||| ||    
T  166358 tcatgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggtt 166259  T
Q  216 catgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattat 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  166258 catgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaaaactaacccccttaccttaattat 166159  T
Q  316 ctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||||||||||||||    
T  166158 ctccaactattagctctagcttcacttttgctcctatg 166121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 164261 - 164349
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  164261 acaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 164349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 116485 - 116410
Alignment:
Q  276 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  116485 aaatgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 24717071 - 24716719
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24717071 acaatatgactaaacatcaacaacaaccattgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 24716972  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    | ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  24716971 atccattttcatacatcgtgaacttgcaatttcattatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccatataaccacgaat 24716872  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24716871 ttcaaagatcgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaaccc 24716772  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24716771 ccttaccttaattatcaccaactattagctctagcttcacttttgctcctatg 24716719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 4 - 353
Target Start/End: Original strand, 39115324 - 39115673
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  39115324 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacgattcatcaacaactatgcataattcaccaattgagcataatttacaaattacc 39115423  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttc 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||||| ||    
T  39115424 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctttacaacataagcacgaatgtc 39115523  T
Q  204 aaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccccct 303  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39115524 aaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaacaccct 39115623  T
Q  304 taccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  39115624 taccttaattattaccaactattagctcaagcttcacttttgctcctatg 39115673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 41507018 - 41506709
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41507018 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 41506919  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| ||    
T  41506918 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacggat 41506819  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41506818 ttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaactaaccc 41506719  T
Q  301 ccttacctta 310  Q
    ||||||||||    
T  41506718 ccttacctta 41506709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 274501 - 274841
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  274501 aacaataacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcat 274600  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  274601 acatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgg 274700  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 312  Q
     ||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  274701 gttcatgataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaat 274800  T
Q  313 tatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  274801 tatctccaactattagctctagcttcacttttgctcctatg 274841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 13 - 353
Target Start/End: Complemental strand, 641348 - 641008
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  641348 aacaataacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcat 641249  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  641248 acatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgg 641149  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 312  Q
     ||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  641148 gttcatgataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaat 641049  T
Q  313 tatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  641048 tatctccaactattagctctagcttcacttttgctcctatg 641008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 13 - 353
Target Start/End: Complemental strand, 827154 - 826814
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  827154 aacaataacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcat 827055  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  827054 acatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgg 826955  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 312  Q
     ||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  826954 gttcatgataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaat 826855  T
Q  313 tatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  826854 tatctccaactattagctctagcttcacttttgctcctatg 826814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 24385914 - 24385652
Alignment:
Q  48 acaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattc 147  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24385914 acaattcatcaacaacaatgcttaattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattc 24385815  T
Q  148 atttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattat 247  Q
    |||||||||||||||| ||||||||||||||||||||  | |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  24385814 atttaacatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcataataatcacttattctcataatcaattat 24385715  T
Q  248 gcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  24385714 gcatagaacaagagaaaaggaattaactaaatgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 16039078 - 16038916
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16039078 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttacaaactacccattttcat 16038979  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaac 175  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||    
T  16038978 acatcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacatactcaaac 16038916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 22321587 - 22321437
Alignment:
Q  69 ataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22321587 ataattcaccaattgagcataatttacaaactacccattttcatacgtcatgaacttgcaatttcatcatcaacaattcaattaacatcaaattaacata 22321488  T
Q  169 ttcaaacatatctctatcaaataagcacgaatttcaaagattggattcatg 219  Q
    ||||||||||||||||  |  | ||||||||||||||||||||| ||||||    
T  22321487 ttcaaacatatctctacaacctgagcacgaatttcaaagattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 21259630 - 21259391
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| |    
T  21259630 aattcatcaattgagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 21259531  T
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaat 270  Q
    |||||||||| |||  | || |||||||||||||||  |||| ||||  ||||||||||||||  |||| || |||||||||||| ||||||  |  |||    
T  21259530 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagtagaaat 21259431  T
Q  271 taactaaatgattatgataaaaactaacccccttacctta 310  Q
    ||||||| |||||||||| ||  |||||||||||||||||    
T  21259430 taactaagtgattatgatgaattctaacccccttacctta 21259391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 68 - 314
Target Start/End: Original strand, 17502274 - 17502521
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||||| ||||||| ||||||||||| |||  ||||||||||||| |||||||||||||| ||||||||| | | ||||||||||||||    
T  17502274 cataattcatcaattgaacataattcacaaactacccttttatatacatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 17502373  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | ||||||||||| |||  | || ||||| ||||||||||||||| ||||| ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  17502374 actcaaacatatcactacaacatgagcacaaatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatagaaaaagagagaaga 17502473  T
Q  268 aattaactaaatgattatg-ataaaaactaacccccttaccttaatta 314  Q
    || ||||||| ||||||||  | ||| |||||||||||| || |||||    
T  17502474 aactaactaagtgattatgcttgaaatctaacccccttatctcaatta 17502521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 68 - 286
Target Start/End: Original strand, 23217990 - 23218208
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||||| ||||||| |||||||| ||||||  ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||    
T  23217990 cataattcatcaattgaacataattcacaaactagccatttatatacatcattaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 23218089  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | ||||||||||| ||| || ||||||||||||||||||  |||| ||||  ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  23218090 actcaaacatatcactaccacataagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagaaga 23218189  T
Q  268 aattaactaaatgattatg 286  Q
    || ||||||| ||||||||    
T  23218190 aactaactaagtgattatg 23218208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 4233968 - 4234162
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| |||||||  |||||| |||||||||||||||  ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||    
T  4233968 cataattcatcaattgaaaataattcacaaactacccatttatatacatcataaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 4234067  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagaga 262  Q
    | ||||||||||| ||   | || ||||| ||||||||||||||| ||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  4234068 actcaaacatatcactgcaacatgagcacaaatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagaga 4234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22235004 - 22234890
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| |     
T  22235004 acaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca- 22234906  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  22234905 tacccattttcataca 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 16404932 - 16404857
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16404932 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 16404857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19993255 - 19993141
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| |||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| |     
T  19993255 acaacatgactaaacaacaacaacaacaattgatgatgaaatttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca- 19993157  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  19993156 tacccattttcataca 19993141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 37611719 - 37611829
Alignment:
Q  6 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-taccc 104  Q
    |||||| ||||||||||||||| |||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||  | || |||||    
T  37611719 atgacttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccc 37611818  T
Q  105 attttcataca 115  Q
    |||||||||||    
T  37611819 attttcataca 37611829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41246704 - 41246792
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  41246704 acaacatgacttaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattaagcata 41246792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20481651 - 20481739
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||| | |||||||||| ||| |||||||||||||||||||| | | |||||||||||||||||||||    
T  20481651 acaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagtataattcaccaattgagcata 20481739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 20573379 - 20573305
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | | |||||||||||||||||||||    
T  20573379 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattgagcata 20573305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 22886440 - 22886590
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    |||| |||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  22886440 catagttcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 22886539  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcat 218  Q
    | |||||| |||  | |  | |  |||||||| ||||||||||||||||||    
T  22886540 actcaaacttattaccaaaacaagagcacgaaattcaaagattggattcat 22886590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 232
Target Start/End: Complemental strand, 18118376 - 18118259
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggat 214  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||  ||||||||||||||| | |  |||||||||||||| ||||   |    
T  18118376 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaatttatatacgcaaacatatctctataacacgagcacgaatttcaacgattaagt 18118277  T
Q  215 tcatgataatcacttatt 232  Q
    |||  |||||||||||||    
T  18118276 tcacaataatcacttatt 18118259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 22147555 - 22147664
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  22147555 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 22147654  T
Q  171 caaacatatc 180  Q
    ||||| ||||    
T  22147655 caaacttatc 22147664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 2545061 - 2545167
Alignment:
Q  69 ataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 168  Q
    |||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||  ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  2545061 ataattcatcaattaagcataattttacaactacccattttcacacattatgaatatgttatttcatcaccaacaattcatttatcattcaattaacata 2545160  T
Q  169 ttcaaac 175  Q
     ||||||    
T  2545161 ctcaaac 2545167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 20648016 - 20647938
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    ||||||| ||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||| | ||||||||    
T  20648016 caacaacgacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataattt 20647938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 20654092 - 20654018
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||| ||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||| ||||||    
T  20654092 caacaacgacatcaattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaattaagcata 20654018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 18612523 - 18612632
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  18612523 aattcatcaattaagcataatttcataacaatccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 18612622  T
Q  171 caaacatatc 180  Q
    ||||| ||||    
T  18612623 caaacttatc 18612632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 18619428 - 18619537
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  18619428 aattcatcaattaagcataatttcataacaatccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 18619527  T
Q  171 caaacatatc 180  Q
    ||||| ||||    
T  18619528 caaacttatc 18619537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 20561804 - 20561740
Alignment:
Q  29 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    |||||||||||||| ||||||||||||||||||||   |||||||||||||||| | ||||||||    
T  20561804 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataattt 20561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 21494592 - 21494496
Alignment:
Q  78 caattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaa 174  Q
    ||||| ||||||||||   |||||||| ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||    
T  21494592 caattaagcataatttcacaactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaa 21494496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 16002113 - 16002223
Alignment:
Q  71 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatat 169  Q
    |||||| ||||| ||||| |||||||||  ||| |||||||| | ||||||||| | ||||||||||| |||||||| | ||| ||||||||| | |||     
T  16002113 aattcaacaattagagcacaatttacaatatactcattttcacatatcatgaacatacaatttcatcaacaacaattaaattatcatcaaattcatatac 16002212  T
Q  170 tcaaacatatc 180  Q
    |||||||||||    
T  16002213 tcaaacatatc 16002223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 3431422 - 3431317
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| || ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  3431422 cataagtcatcaattaagcataatttcacaacaactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 3431323  T
Q  168 attcaa 173  Q
    | ||||    
T  3431322 actcaa 3431317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 21681066 - 21681137
Alignment:
Q  19 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataa-ttcaccaattgagcata 89  Q
    ||||||| | ||||||||||||||  ||||||||||| ||||||| | |||||| || ||||||||||||||    
T  21681066 aacaacatcaattgatcatgaaactaatcacaattcaacaacaacaaagcataatttaaccaattgagcata 21681137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 39446953 - 39446878
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||   ||||||||| ||||||| ||||||    
T  39446953 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata 39446878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Complemental strand, 31194251 - 31194217
Alignment:
Q  276 aaatgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||||    
T  31194251 aaatgattatgatgaaaactaacccccttacctta 31194217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 13662214 - 13662182
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  13662214 atgattatgataataactaacccccttacctta 13662182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 13720877 - 13720845
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  13720877 atgattatgataataactaacccccttacctta 13720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 16873000 - 16872968
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  16873000 atgattatgataataactaacccccttacctta 16872968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 43373424 - 43373392
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  43373424 atgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 11342730 - 11343039
Alignment:
Q  1 acaatatgactaaacaa-caacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac 99  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342730 acaatatgactaaacaaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac 11342829  T
Q  100 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  11342830 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaa 11342929  T
Q  200 tttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacc 299  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342930 tttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacc 11343029  T
Q  300 cccttacctt 309  Q
    ||||||||||    
T  11343030 cccttacctt 11343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 2031856 - 2032165
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2031856 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 2031955  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  2031956 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 2032055  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2032056 ttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaacgattatgatgaaaactaaccc 2032155  T
Q  301 ccttacctta 310  Q
    ||||||||||    
T  2032156 ccttacctta 2032165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 21204984 - 21205268
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21204984 aacaacaacaacaaatattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 21205083  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  21205084 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 21205183  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaa 297  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  21205184 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaa 21205268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 21650753 - 21651050
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21650753 aacaacaacaacatctattgatcatgaaacttatcacaattcaacaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 21650852  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  21650853 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 21650952  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  21650953 gttcatgataatcacttattcccataatcaactatgcacagaacaagagaaaaagaattaaccaaatgattatgataaatattaacccccttacctta 21651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 68 - 310
Target Start/End: Original strand, 16105757 - 16105999
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| |||||||    
T  16105757 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacat 16105855  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 266  Q
    || ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16105856 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 16105955  T
Q  267 gaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||  |||||||||||||||| ||||||||||||||||||    
T  16105956 gaattaatcaaatgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 22662805 - 22662653
Alignment:
Q  80 attgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatat 179  Q
    ||||| |||||||  ||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  22662805 attgaacataattctcaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatattcaaatatat 22662706  T
Q  180 ctctatcaaataagcacgaatttcaaagattggattcatgataatcacttatt 232  Q
    | |||  | || ||||||||||||||||||||| ||||  |||||||||||||    
T  22662705 cactacaacatgagcacgaatttcaaagattgggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 306
Target Start/End: Original strand, 25004929 - 25005165
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| |||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| ||| | | |||||||||     
T  25004929 cataaatcaccaattgagcataattctcaaactacccatttacatacatcatgaacatgcaatttcataattaacaattcaattatccttaaattaacac 25005028  T
Q  168 attcaaacatatctctatcaa-ataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaa 266  Q
    | ||||||||||| || |||| || ||||||||||||||||||||| ||||  ||||||||||||||   | | || |||| |||| |||||  |||||     
T  25005029 actcaaacatatcact-tcaacatgagcacgaatttcaaagattgggttcacaataatcacttattcaattgagcacttattcatacaacaattgaaaa- 25005126  T
Q  267 gaattaactaaatgattatgataaaaactaacccccttac 306  Q
     | | ||||||||||||||||| || ||||||||||||||    
T  25005127 -actaaactaaatgattatgatgaagactaacccccttac 25005165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 28261572 - 28261655
Alignment:
Q  6 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  28261572 atgactaaacaacaacaacaacaattgatcataaaacatatcacaatttatcaacaacaatgcataattcaccaattgagcata 28261655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 21646935 - 21646826
Alignment:
Q  6 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-taccc 104  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||| || || |||||    
T  21646935 atgactaaacaacaacagcaacaattgatcatgaaacatatcacaattcatcaacaacgatacataattcaccaattgaacat-attttcatacataccc 21646837  T
Q  105 attttcataca 115  Q
    |||||||||||    
T  21646836 attttcataca 21646826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 21397150 - 21397253
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttca 111  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||    
T  21397150 aacaataacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttca 21397249  T
Q  112 taca 115  Q
    ||||    
T  21397250 taca 21397253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 11584100 - 11584188
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccat---gcataattcaccaattgagcata 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    |||||||||||||||||||||||    
T  11584100 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaattgagcata 11584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4865309 - 4865397
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||| |||||||| | |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  4865309 acaacatgaataaacaaccataacaacaattgatcatgaaacatatcacaattcatcaaccacaatgcataattcaccaattgagcata 4865397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 24475629 - 24475738
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| |||||||||||||||||||||   ||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||| ||| |     
T  24475629 acaacatgactaaacaacaacaacaa---ttgatcatgaaacata--acaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca- 24475722  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  24475723 tacccattttcataca 24475738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1168405 - 1168317
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  1168405 acaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgagcata 1168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20712122 - 20712210
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||| | |||||||||| ||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  20712122 acaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagcataattcaccaattgagcata 20712210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| ||  ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 7529014 - 7529126
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  7529014 cataattcatcaattaagcataatttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 7529113  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  7529114 actcaaacttatc 7529126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 17909622 - 17909731
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  17909622 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 17909721  T
Q  171 caaacatatc 180  Q
    ||||| ||||    
T  17909722 caaacttatc 17909731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 11337382 - 11337299
Alignment:
Q  6 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||| | ||||||||||| | |||||||||||||| ||||||||||||||||||||    ||||||||||||| ||||||||    
T  11337382 atgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaaatgagcata 11337299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 24183319 - 24183245
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||| || | ||||||||||||||  ||||||||||| ||||||| | |||||||||||||||||||||||    
T  24183319 caacaacaccatcaattgatcatgaaactcatcacaattcaacaacaacaaagcataattcaccaattgagcata 24183245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 9730524 - 9730419
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  9730524 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 9730425  T
Q  168 attcaa 173  Q
    | ||||    
T  9730424 actcaa 9730419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 21906778 - 21906851
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||| ||||||| ||||    
T  21906778 aacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcatcaattgaacata 21906851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 108974 - 108862
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  | ||||||| |||||||||||||| |||  |||||||||    
T  108974 cataagtcatcaattaagcataatttcacaacaatccattttcatacattatgaacatgttaattcatcaccaacaattcatttatcattcaattaacat 108875  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  108874 actcaaacttatc 108862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 3673922 - 3673989
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 82  Q
    ||||||||||| | |||||||||||||| |||||||||||| |||||||   |||||||||| |||||    
T  3673922 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaacaatt 3673989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 11763694 - 11763526
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt-gagcataatttacaaactacccattttca 111  Q
    ||||||||||||||| ||| | |||||| |  ||||||| ||| |||||||   ||| |||||| ||||| ||||| |||| ||||  |||||||||  |    
T  11763694 aacaacaacaacaacaattaaacatgaatcccatcacaaatcaacaacaacatagcacaattcaacaattagagcacaattcacaatatacccatttata 11763595  T
Q  112 tacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
     || |||||||| || |||||||||| || ||| ||| ||| ||||||||| |  || |||||||||||    
T  11763594 cacctcatgaacatgaaatttcatcaacatcaactcaattatcatcaaattcatctactcaaacatatc 11763526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 19405611 - 19405672
Alignment:
Q  29 attgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    |||||||||||||| |||||||||||| ||||||| |  |||||||| || |||||||||||    
T  19405611 attgatcatgaaacttatcacaattcaacaacaacgaatcataattcaactaattgagcata 19405672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 7425631 - 7425663
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  7425631 atgattatgataataactaacccccttacctta 7425663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 22054021 - 22053957
Alignment:
Q  29 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    ||||| |||||| |||||| ||||||| |||||||   ||| ||||||||||||||||| |||||    
T  22054021 attgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattt 22053957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 23466517 - 23466557
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattca 55  Q
    ||||||||||| | |||||||||||||| ||||||||||||    
T  23466517 caacaacaacatcaattgatcatgaaacttatcacaattca 23466557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 23507270 - 23507302
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  23507270 atgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 35791047 - 35791015
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  35791047 atgattatgataataactaacccccttacctta 35791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 660 - 309
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 100  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  660 acaatatgagtaaatatcaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaact 561  T
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaat 200  Q
    |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  | |||||||| |||    
T  560 attcattttcatacatcatgaacttgcaatttcatcatctacaattcatttaacatcaaattaacatattcaaatatatctctacaacataagcacaaat 461  T
Q  201 ttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaaccc 300  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||    
T  460 ttcaaatattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-aaaagaattaactagatgattatgataaagaataaccc 362  T
Q  301 ccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    | |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  361 cgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatg 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 30137 - 30492
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgca---taattcaccaattgagcataatttacaa 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   | |  || ||||||||||||||||||||    
T  30137 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatacaatttcaaacaacaattgagcataatttacaa 30236  T
Q  98 actacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacg 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |    
T  30237 actacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcatg 30336  T
Q  198 aatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaa 297  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||    
T  30337 aatttcaaagatagggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaataattaactaaatgattatgatgaaaaataa 30436  T
Q  298 cccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||| |||| ||||| ||| ||||||||||||||| |||||    
T  30437 cccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatg 30492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 258; Significance: 1e-143; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 55639 - 55936
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55639 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcct 55738  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  55739 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgg 55838  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55839 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 207 - 310
Target Start/End: Complemental strand, 108179 - 108075
Alignment:
Q  207 gattggattcatgataatcacttattctcataatcaattatgcatagaac-aagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 305  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaatgaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 108080  T
Q  306 cctta 310  Q
    |||||    
T  108079 cctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 351
Target Start/End: Complemental strand, 104555 - 104477
Alignment:
Q  273 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    |||||||||||||||| ||  ||||||| ||||||||||||| | | || | ||||| | ||||||||||| |||||||    
T  104555 actaaatgattatgatgaattctaacccacttaccttaattagcacaaattcttagcccaagcttcactttagctccta 104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 1175 - 878
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1175 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 1076  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||  | ||||||||||||||||||||||||    
T  1075 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaacctctacaacataagcacgaatttcaaagattgg 976  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  975 gttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 251; Significance: 1e-139; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 13583 - 13285
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13583 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 13484  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  13483 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 13384  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  13383 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 21557 - 21432
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21557 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 21458  T
Q  113 acatcatgaacttgcaatttcatcat 138  Q
    ||||||||||||||||||||||||||    
T  21457 acatcatgaacttgcaatttcatcat 21432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 17601 - 17304
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17601 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 17502  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  17501 acatcatgaacttgcaatttcatcatcaacaattcatttaaaatcaaattaacatattcaaacatatctctaccacataagcactaatttcaaagattgg 17402  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  17401 gttcatgataatcaattattctcataatcaattatgcatagaacaagagaaaaagaattacctaaatgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 4 - 310
Target Start/End: Complemental strand, 12726 - 12418
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacc 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12726 atatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacc 12627  T
Q  104 cattttcatacatcatgaacttgcaatttcatcatcaacaatt--catttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||  | |||||||| ||||    
T  12626 cattttcatacatcatgaacttgcaatttcatcatcaacaattcacattaatcatcaaattaacatattcaaacatatctctacaacataagcacaaatt 12527  T
Q  202 tcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccc 301  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12526 tcaaagattgggttcatgataataacttattcccataatcaattatgcatagaacaaaagaaaaagaattaactaaatgattatgataaaaactaacccc 12427  T
Q  302 cttacctta 310  Q
    |||||||||    
T  12426 cttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 19107 - 19049
Alignment:
Q  4 atatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaa 62  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19107 atatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaa 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 6740 - 6443
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||| | | ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6740 aacaacaacaagatctattgatcatcaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 6641  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  6640 acatcatgaacttgcaatttcatcatcaacaattcatttgacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 6541  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6540 gttcatgataagcacctattatcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 231; Significance: 1e-127; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 311
Target Start/End: Complemental strand, 193684 - 193396
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193684 aacaacaacaacatctattgatcatgaaacatatcacaata-atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 193586  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||    
T  193585 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctct---------gcacgaatttcaatgattgg 193495  T
Q  213 attcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaa 311  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  193494 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 186722 - 186560
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186722 aacaacaacaacatctattgatcatgaaacatatcacaata-atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 186624  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaaca 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186623 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaaca 186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 196; Significance: 1e-106; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 64 - 310
Target Start/End: Complemental strand, 4593 - 4346
Alignment:
Q  64 catgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatta 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4593 catgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatta 4494  T
Q  164 acatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaa-caagaga 262  Q
    ||||||| |||||||||||||  | |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||  ||||||    
T  4493 acatatttaaacatatctctacaacataagcactaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaatgaagaga 4394  T
Q  263 aaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||    
T  4393 aaaagaattaaccaaatgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 225 - 5
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    |||||||||||||   |||||||||||||| ||||| ||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  225 aacaacaacaacatttattgatcatgaaacttatcataattcatcaattattatgcataattcaccaattgagcataatttacaaactacccattttcat 126  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  125 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 26  T
Q  213 attcatgataatcacttattc 233  Q
     ||||||||||||||||||||    
T  25 gttcatgataatcacttattc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 10163 - 9882
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||                 |||||||||||||    
T  10163 aacaacaacaacatccattgatcatgaaacttatcacaattcatcaacaaccaagcataattcgccaatt-----------------tacccattttcat 10081  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  10080 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 9981  T
Q  213 attcatgataatcacttattctcataatcaa-ttatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 310  Q
     ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9980 gttcatgataatcacttattttcataatcaatttatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 15007 - 15236
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  15007 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaaataaacattttcat 15106  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattgg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  15107 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaaagattgg 15206  T
Q  213 attcatgataatcacttattctcataatca 242  Q
     |||||||||||||||||||| ||||||||    
T  15207 gttcatgataatcacttattcccataatca 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 914 - 882
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  914 atgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 42568 - 42749
Alignment:
Q  169 ttcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 268  Q
    ||||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42568 ttcaaccatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 42667  T
Q  269 attaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  42668 attaactaaatgattatgataaaaactaacccccttacct---ttatctccaactattagctctagcttcacttttgctcctatg 42749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 68 - 309
Target Start/End: Original strand, 130670 - 130911
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| ||||| |    
T  130670 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacgt 130768  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 266  Q
    || ||||||||||||||  | || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  130769 atccaaacatatctctacaacatgagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 130868  T
Q  267 gaattaactaaatgattatgataaaaactaacccccttacctt 309  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  130869 gaattaatcaaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 89655 - 89578
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    |||||||||| | |||| ||||||||| |||||||||| | ||||||| | ||||||||||||||||||||| |||||    
T  89655 aacaacaacatcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgagcacaattt 89578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 9704 - 9537
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 112  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  9704 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataagtcactaattgagcataatttacaaactacccattttcat 9605  T
Q  113 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||| |||||||||||||||||||||||||||||||| ||   |||||||||| |||||| ||||    
T  9604 acatcataaacttgcaatttcatcatcaacaattcatttagcaatcaattaacatactcaaacttatc 9537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 314
Target Start/End: Complemental strand, 44279 - 44009
Alignment:
Q  45 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||||||| ||||||| ||| ||||||||  ||||||||||||| | |||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  44279 atcacaattcaacaacaac-atgtcataattcgtcaattgagcataactcacaaactacttatttacatacatcatgaacatgcaatttcatcatcaaca 44181  T
Q  144 attcatttaacatcaaattaacatattcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaa 243  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||  | || ||||||||||||||||||| | ||||  ||||||||||||||  |||||||     
T  44180 attcaattaccatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcacttattcaaataatcac 44081  T
Q  244 ttatgcatagaacaagagaaaaagaattaactaaatgattatga-taaaaactaacccccttaccttaatta 314  Q
    |||||||||| | |||||| ||  |||||||||| ||||||||| | ||| |||||||| |||||| |||||    
T  44080 ttatgcatagcaaaagagagaagaaattaactaagtgattatgattgaaatctaaccccgttacctcaatta 44009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 109; Significance: 9e-55; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 95035 - 95204
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac----aaactacccattttc 110  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||| | ||||||    
T  95035 caacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttacaaataaactatctattttc 95134  T
Q  111 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  |||||||||| |||||| ||||    
T  95135 atacatcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacatactcaaacttatc 95204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 24917 - 24841
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  24917 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 24841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 68 - 343
Target Start/End: Complemental strand, 1643 - 1371
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| |||||||||||||||  |||||||| |||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  1643 cataattcatcaattgagcataattctcaaactactcatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacat 1544  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | ||||||||||| |||  | || ||||||||||||||||||||| ||||  ||||||| ||||||   ||| || |||| |||| |||||  ||||       
T  1543 actcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcatttattcaattaagcacttattcatacaacaaatgaaa--- 1447  T
Q  268 aattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 343  Q
    | |  |||||||||||||||| ||  ||||||||||||||| ||||||| |||| |  |||||| |||||||||||    
T  1446 actacactaaatgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcacttt 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 351
Target Start/End: Original strand, 219 - 499
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||||||||||||| ||||||||| |||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  219 cataattcaacaattgagcataattcacaaactacacatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacat 318  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 267  Q
    | ||||||||||| |||  | || |||| |||||||||||||||| ||||  ||||||||||||||   ||| || |||| |||| |||||  ||||       
T  319 actcaaacatatcactacaacatgagcaagaatttcaaagattgggttcacaataatcacttattcaattaagcacttattcatacaacaaatgaaa--- 415  T
Q  268 aattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    | |  ||||||||||||  || ||  ||||||||||||||| | ||||| |||| |  |||||| ||||||||||| |||||||    
T  416 actacactaaatgattacaatgaattctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 32249 - 32363
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac- 99  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||     
T  32249 acaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcat-attttcaaaca 32347  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  32348 tacccattttcataca 32363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42054 - 41940
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac- 99  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||| |||||     
T  42054 acaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcatatttt-caaaca 41956  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  41955 tacccattttcataca 41940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 314
Target Start/End: Complemental strand, 3981 - 3732
Alignment:
Q  70 taattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatat 169  Q
    ||||||| ||||||| ||||||| |||||||||||||||  ||| ||||||||| |||||||||||||| ||||||||| | | |||||||||||||||     
T  3981 taattcatcaattgaacataattcacaaactacccatttatatatatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatac 3882  T
Q  170 tcaaac----atatctctatcaaataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaa 265  Q
    ||||||    ||||| |||  | || |||||||||||||||  |||| ||||  ||||||||||||||  |||| || |||||||||||| |||||| ||    
T  3881 tcaaacatatatatcactacaacatgagcacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagaa 3782  T
Q  266 agaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 314  Q
      || ||||||| ||||||||  | ||| |||||||| |||||| |||||    
T  3781 gaaactaactaagtgattatgcttgaaatctaacccctttacctcaatta 3732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14923 - 15034
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaac 99  Q
    |||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| |     
T  14923 acaacatgactaaacaacaacaaca---attgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca- 15018  T
Q  100 tacccattttcataca 115  Q
    ||||||||||||||||    
T  15019 tacccattttcataca 15034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 69; Significance: 7e-31; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 15660 - 15584
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15660 aacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 15584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 15398 - 15324
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatg 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 36869 - 36836
Alignment:
Q  278 atgattatgataaaaactaacccccttaccttaa 311  Q
    |||||||||||||| |||||||||||||||||||    
T  36869 atgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 7034 - 6932
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttca 111  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||||||||||||    
T  7034 aacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcacaca-tacccattttca 6936  T
Q  112 taca 115  Q
    ||||    
T  6935 taca 6932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 1009 - 935
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  1009 caacaacaacaacaattgatcatgaaacttatcacaaatcatcaataacaatgcataattcaccaattgagcata 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 5996 - 6133
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| |||||||||| |||| ||||||||||||||| | || ||||||||| |||||||||||||||||||||||| ||| |||||| |||||||    
T  5996 cataaatcatcaattgagcacaattcacaaactacccatttacttatatcatgaacatgcaatttcatcatcaacaattcaattatcatcaatttaacat 6095  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaa 205  Q
    | ||||||||||| |||  | || ||||| ||||||||    
T  6096 actcaaacatatcactacaacatgagcacaaatttcaa 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 132451 - 132363
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  132451 acaacatgacttaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacgatgcataattcaccaattgagcata 132363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 88333 - 88409
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||| ||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||    
T  88333 aacaacagcaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgatcata 88409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11747 - 11821
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcat 88  Q
    ||||||||||| | |||||||||||||| |||||||||||  |||||||   ||||||||| |||||||||||||    
T  11747 caacaacaacatcaattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgagcat 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 65; Significance: 2e-28; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 70823 - 70735
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  70823 acaacatgactaaacaacaacaacatccaatgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 70735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 165107 - 164995
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||  |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  165107 cataattcatcaattaagcataatttcataagaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 165008  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  165007 actcaaacttatc 164995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 60866 - 60933
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 82  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | ||||||||||||||||    
T  60866 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaatt 60933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 172210 - 172242
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  172210 atgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 177913 - 177945
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  177913 atgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 255001 - 254900
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcata 113  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||    
T  255001 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcata 254902  T
Q  114 ca 115  Q
    ||    
T  254901 ca 254900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 261607 - 261506
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcata 113  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||    
T  261607 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcata 261508  T
Q  114 ca 115  Q
    ||    
T  261507 ca 261506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5447 - 5359
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  5447 acaacatgacttagcaacaacaacatcaattgatcatgaaacatatcacaattcatcaacaacaatgcctaattcaccaattgagcata 5359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 9069 - 8994
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||| | |||||||   ||||||||| ||||||||||||||    
T  9069 caacaacaacatcaattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgagcata 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38344 - 38432
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||||||||||||||||  | |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  38344 acaacatgactaaacaacaacaacgtcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcgccaattgagcata 38432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22737 - 22825
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| ||||| |||||||||||||| | |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  22737 acaacatgacaaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcata 22825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 128127 - 128095
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  128127 atgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11909 - 11821
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  11909 acaacatgacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacaatgcataattcaccaattgagcata 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 11840 - 11740
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcatac 114  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||||||| |||  | || |||||||||||||||    
T  11840 aacaacaacaacaattgatcatgaaacttttcacaattcatcaacaacaatgcataattcactaattgagcatattttcaacacatacccattttcatac 11741  T
Q  115 a 115  Q
    |    
T  11740 a 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 1377 - 1451
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  1377 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7615 - 7703
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||||||||||| | |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||    
T  7615 acaacatgacttaacaacaacaacatcaattgatcatgaaacttatcataatttatcaacaacaatgcataattcaccaattgagcata 7703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 146659 - 146735
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  146659 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattgagcata 146735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 146906 - 146938
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  146906 atgattatgataaagactaacccccttacctta 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 1701 - 1775
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 1775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 17812 - 17962
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  17812 cataattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 17911  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcat 218  Q
    | |||||| |||| | |  | |  |||||||| |||||||||||| |||||    
T  17912 actcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 17962  T

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Target: scaffold0122 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 19881 - 19807
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 24185 - 24111
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatg 24111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 85378 - 85466
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | |||||||||||||| |||||||||||||||||||||  |||||||||||||||| ||||||    
T  85378 acaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattaagcata 85466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 159359 - 159438
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcataattt 93  Q
    ||||||||||| | |||||||||||||| |||||||||||| || ||||   ||||||||| ||||||||||||||||||    
T  159359 caacaacaacatcaattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataattt 159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 253190 - 253102
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| ||||| ||||||||| |||||||||||||| |||||||||||| ||||||| | |||| ||||||||||||||||||    
T  253190 acaacatgacttaacaaaaacaacaacaattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgagcata 253102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 247398 - 247366
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  247398 atgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 4351 - 4445
Alignment:
Q  21 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcataca 115  Q
    ||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| |||| ||| ||| | ||||||||||||||||    
T  4351 caacaacaattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattgaacatattttcacaca-tacccattttcataca 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 204 - 278
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  204 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 94 - 164
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcc 349  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 5722 - 5572
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    |||||||||  |||| ||||||||||  |||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  5722 cataattcattaattaagcataatttcaaaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 5623  T
Q  168 attcaaacatatctctatcaaataagcacgaatttcaaagattggattcat 218  Q
    | |||||| |||| | |  | |  |||||||| |||||||||| |||||||    
T  5622 actcaaacttatcaccaaaacaagagcacgaaattcaaagattagattcat 5572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| || |||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 301 - 227
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | ||||||||| |||| |||||||||||| ||||||| |  |||||||||| |||| ||||||    
T  301 caacaacaacatcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcata 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 6591 - 6521
Alignment:
Q  19 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||| | ||||||||| |||| |||||||||||| ||||||| |  |||||||||| |||| ||||||    
T  6591 aacaacatcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaattaagcata 6521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 316
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatc 316  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 9997 - 10071
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||    
T  9997 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 10071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 20493 - 20567
Alignment:
Q  279 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 353  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatg 20567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 777 - 689
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||| ||||||||    
T  777 acaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcata 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 34554 - 34442
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  34554 cataattcatcaattaagcataatttcacaactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 34455  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  34454 actcaaacttatc 34442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 61391 - 61256
Alignment:
Q  45 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||    
T  61391 atcacaattcaacaacaac-atgtcataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaaca 61293  T
Q  144 attcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||||| |||  |||||||||| |||||| ||||    
T  61292 attcatttatcattcaattaacatactcaaacttatc 61256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 48903 - 48935
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  48903 atgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 153956 - 153924
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  153956 atgattatgataataactaacccccttacctta 153924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 25018 - 25092
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||||| |  ||||||||||||||||||||||    
T  25018 caacaacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 25092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 25271 - 25345
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||||| |  ||||||||||||||||||||||    
T  25271 caacaacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 25345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 704 - 631
Alignment:
Q  16 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||   |||||||||||||| ||||||||    
T  704 aacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcata 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 48205 - 48286
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattta 94  Q
    |||||||| || ||| |||||||||||||| | |||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  48205 aacaacaataataacaattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttta 48286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 61653 - 61734
Alignment:
Q  13 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattta 94  Q
    |||||||| || ||| |||||||||||||| | |||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  61653 aacaacaataataacaattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttta 61734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 109663 - 109582
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 82  Q
    |||| |||||| | ||||||||||| | |||||||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  109663 acaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatt 109582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 118164 - 118076
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | | |||||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||    
T  118164 acaacatgacttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacata 118076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 11862 - 11970
Alignment:
Q  72 attcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattc 171  Q
    ||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| ||    
T  11862 attcatcaattaagcataatttcacaactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactc 11961  T
Q  172 aaacatatc 180  Q
    |||| ||||    
T  11962 aaacttatc 11970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 26372 - 26340
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  26372 atgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21558 - 21646
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | | | |||||||||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  21558 acaacatgacttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 21646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31257 - 31345
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | |||||| |||| | |||||| ||||||| ||||||||||||||||||||   | |||||| ||||||||||||||    
T  31257 acaacatgacttagcaacaaaaacatcaattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattgagcata 31345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33708 - 33800
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 93  Q
    ||||||| ||| | ||||||||||| | |||||||||||||| ||||| ||||||||||||||   |||||||||||||||| | ||||||||    
T  33708 acaatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacatagcataattcaccaattaaacataattt 33800  T

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Target: scaffold0075 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4987 - 5075
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | |||||||||||||| |||||||||||| ||||||| |  ||||||||||||||| ||||||    
T  4987 acaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaattaagcata 5075  T

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Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 49989 - 49877
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||||||| ||||| || |||||||   |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  49989 cataattcatcaattaagtataatttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 49890  T
Q  168 attcaaacatatc 180  Q
    | |||||| ||||    
T  49889 actcaaacttatc 49877  T

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Target: scaffold0022 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 112746 - 112658
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| |||||||||||||   |||||||||||||| ||||||||||||||||| ||   ||||||||||| |||||||||||    
T  112746 acaacatgacttaacaacaacaacataaattgatcatgaaacttatcacaattcatcaaccacatagcataattcactaattgagcata 112658  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 68089 - 67997
Alignment:
Q  71 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 162  Q
    |||||| ||||| ||||| |||| ||||  |||||||||||| | || |||||| ||||||||||||  |||||||||| ||| || ||||||    
T  68089 aattcaacaattagagcacaattcacaatatacccattttcacatattatgaacatgcaatttcatctacaacaattcaattatcaccaaatt 67997  T

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Target: scaffold0173 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 5338 - 5485
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 170  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| ||   |||||||||| |    
T  5338 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacatact 5437  T
Q  171 caaacatatctctatcaaataagcacgaatttcaaagattggattcat 218  Q
    ||||| |||| | |  | |  |||||||| |||||||||||| |||||    
T  5438 caaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 5485  T

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Target: scaffold0160 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 81 - 155
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||| ||   ||||||||||| |||||||||||    
T  81 caacaacaacatcaattgatcatgaaacttatcacaattcatcaaccacgtagcataattcacgaattgagcata 155  T

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Target: scaffold0367 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 17478 - 17355
Alignment:
Q  45 atcacaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 143  Q
    ||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||   | | |||||||||||||||| |||||| ||  ||||||||| |||||    
T  17478 atcacaattcaacaacaac-atgtcataagtcatcaattaagcataatttcacagcaacccattttcatacattatgaacatgttatttcatcaccaaca 17380  T
Q  144 attcatttaacatcaaattaacata 168  Q
    ||||||||| |||  ||||||||||    
T  17379 attcatttatcattcaattaacata 17355  T

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Target: scaffold0338 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9033 - 9121
Alignment:
Q  1 acaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||| |||||| | ||||||||||| | | ||||| |||||| |||||||| |||||||||||   |||||||||||||||||||||||    
T  9033 acaacatgacttagcaacaacaacatcaagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcata 9121  T

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Target: scaffold0117 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 11755 - 11681
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 89  Q
    |||||||||||   ||||||||||||||  ||||||||||| ||||||| | |||||||||||||||| ||||||    
T  11755 caacaacaacataaattgatcatgaaactgatcacaattcaacaacaacaaagcataattcaccaattaagcata 11681  T

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Target: scaffold0615 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 6357 - 6252
Alignment:
Q  68 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 167  Q
    ||||| ||| ||||| ||| ||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  6357 cataagtcatcaattaagcttaatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 6258  T
Q  168 attcaa 173  Q
    | ||||    
T  6257 actcaa 6252  T

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Target: scaffold0833 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3359 - 3407
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 63  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  3359 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 3407  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 70676 - 70748
Alignment:
Q  18 caacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    |||||||| | |||||||||||||| |||||||||||| ||||||| | ||||||||| ||||||| ||||||    
T  70676 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaaccaattaagcata 70748  T

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Target: scaffold0317 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 12734 - 12637
Alignment:
Q  71 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 168  Q
    |||||| |||||||||||||||||  || ||  |||||  ||| | ||||||| ||||||||||||||||| |||||| ||| || ||| ||||||||    
T  12734 aattcatcaattgagcataatttatcaattattcatttatatataacatgaacatgcaatttcatcatcaataattcaattatcaacaagttaacata 12637  T

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Target: scaffold0601 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 981 - 902
Alignment:
Q  101 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 180  Q
    ||||||||||| | || |||||| ||||||||||||| |||||||||| ||| || |||||| |  || |||||||||||    
T  981 acccattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaaattcatttactcaaacatatc 902  T

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Target: scaffold0095 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 33915 - 33840
Alignment:
Q  15 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagcata 89  Q
    ||||||||||| | |||||||||||| | |||||||||||| |||||||   ||||||||| ||||||| ||||||    
T  33915 caacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata 33840  T

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Target: scaffold0413 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Complemental strand, 6024 - 5990
Alignment:
Q  276 aaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||||| ||||||||||||||||||    
T  6024 aaatgattatgataaagactaacccccttacctta 5990  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Complemental strand, 57426 - 57392
Alignment:
Q  276 aaatgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||||| ||||||||||||||||||    
T  57426 aaatgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0468 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 11041 - 10992
Alignment:
Q  128 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacat 177  Q
    ||||||||||||||||| ||| | ||||||||||| ||||| ||||||||    
T  11041 aatttcatcatcaacaactcaatcaacatcaaattcacatactcaaacat 10992  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 7165 - 7112
Alignment:
Q  115 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 168  Q
    ||||||||| ||||| |||||||||||||||||| ||| || ||| ||||||||    
T  7165 atcatgaacatgcaaattcatcatcaacaattcaattatcaacaagttaacata 7112  T

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Target: scaffold0013; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  294 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 351  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 244920 - 244855
Alignment:
Q  116 tcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatct 181  Q
    |||||||| | ||||||||||||| | |||||| ||| || ||||||||||||  |||||||||||    
T  244920 tcatgaacatacaatttcatcatccataattcaattatcaacaaattaacatacccaaacatatct 244855  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 272330 - 272362
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  272330 atgattatgataaagactaacccccttacctta 272362  T

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Target: scaffold1500 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 1463 - 1431
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  1463 atgattatgataataactaacccccttacctta 1431  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 1524 - 1492
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  1524 atgattatgataataactaacccccttacctta 1492  T

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Target: scaffold0498 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 9183 - 9215
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  9183 atgattatgataaagactaacccccttacctta 9215  T

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Target: scaffold0383 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 2700 - 2732
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    ||||||||||||| |||||||||||||||||||    
T  2700 atgattatgataataactaacccccttacctta 2732  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 12418 - 12450
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  12418 atgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 1430 - 1462
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  1430 atgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

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Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  278 atgattatgataaaaactaacccccttacctta 310  Q
    |||||||||||||| ||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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