View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9967_low_4 (Length: 271)
Name: NF9967_low_4
Description: NF9967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9967_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 97 - 255
Target Start/End: Original strand, 44189289 - 44189447
Alignment:
| Q |
97 |
gcttagataacatatatattattctccaaaattaatttcagggagagatttagacatgacgaatattgtattcagtattctccctaaacttcctattgag |
196 |
Q |
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| T |
44189289 |
gcttagataacatatatattattctccaaaattaatttcagagagagatttagacatgacgaatattgtattcagtattctccctaaacttcctattgag |
44189388 |
T |
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| Q |
197 |
cctctcaaccaatttactaatggtttgaacttaactacattatgcttgtgatatgtatg |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44189389 |
cctctcaaccaatttactaatggtttgaacttaactacattatgcttgtgatatgtatg |
44189447 |
T |
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