View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9968_high_4 (Length: 245)
Name: NF9968_high_4
Description: NF9968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9968_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 45559918 - 45559704
Alignment:
| Q |
15 |
gagtagattagtagaaaggctgagataggtgagtttgtggaggttagagaatgagtgaggtatttggccggtaaagtaattagaagaaaggtctaaatag |
114 |
Q |
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| T |
45559918 |
gagtagattagtagaaaggctgagataggtgagtttgtggaggttagagaatgagtgaggtatttgaccggtaaagtaattagaagaaaggtctaagtag |
45559819 |
T |
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| Q |
115 |
ttgaggtgtgtgcaattagaaatttcaggtcgtaatggagcatgaatgttaaaagaggaaaggttgagagagactacacggtgagtggaagggttgcatt |
214 |
Q |
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| T |
45559818 |
ttgaggtgtgtgcaattagaaatttcaggtcgtaatggagcatgaatgttacaagaggaaaggttgagagagactacacggtgagtggaagggttgcatt |
45559719 |
T |
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| Q |
215 |
tgacacccttccatg |
229 |
Q |
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| T |
45559718 |
tgacacccttccatg |
45559704 |
T |
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