View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9970_low_3 (Length: 328)

Name: NF9970_low_3
Description: NF9970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9970_low_3
NF9970_low_3
[»] chr1 (3 HSPs)
chr1 (111-294)||(1968416-1968599)
chr1 (111-294)||(1953335-1953517)
chr1 (112-182)||(47580079-47580148)
[»] chr6 (2 HSPs)
chr6 (110-294)||(6950058-6950242)
chr6 (109-234)||(19698238-19698363)
[»] chr8 (3 HSPs)
chr8 (112-294)||(4327234-4327414)
chr8 (112-228)||(21185678-21185794)
chr8 (112-234)||(1789297-1789419)
[»] chr3 (7 HSPs)
chr3 (111-294)||(11634542-11634725)
chr3 (112-233)||(42258194-42258314)
chr3 (111-233)||(42254072-42254195)
chr3 (130-254)||(11641110-11641234)
chr3 (111-233)||(19930552-19930664)
chr3 (109-158)||(19935631-19935680)
chr3 (194-233)||(19935593-19935632)
[»] chr2 (4 HSPs)
chr2 (111-232)||(2590085-2590206)
chr2 (112-217)||(34564342-34564447)
chr2 (112-234)||(18739504-18739626)
chr2 (111-148)||(35969734-35969771)
[»] scaffold0014 (2 HSPs)
scaffold0014 (111-234)||(86621-86744)
scaffold0014 (112-203)||(82233-82314)
[»] chr7 (5 HSPs)
chr7 (116-229)||(11673603-11673716)
chr7 (111-206)||(39426629-39426724)
chr7 (142-294)||(3850918-3851070)
chr7 (18-109)||(5756624-5756715)
chr7 (18-111)||(5752710-5752803)


Alignment Details
Target: chr1 (Bit Score: 164; Significance: 1e-87; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 111 - 294
Target Start/End: Original strand, 1968416 - 1968599
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcct 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1968416 ttgttgtatttttaagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcct 1968515  T
Q  211 tatttgtcaaatttattttatatatagttttgtaacaattgatgcttgacagtttggtcaaaggattaaatcacatttcctatt 294  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  1968516 tatttatcaaatttattttatatttagttttgtaacaattgatgcttcacagtttggtcaaaggcttaaatcacatttcctatt 1968599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 111 - 294
Target Start/End: Original strand, 1953335 - 1953517
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcct 210  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  1953335 ttgttgtatttttaagttgatattatattttaaaagttattaaaa-ttgttcattattttttgttgatttaaccatgtgatatttactaagtcaaagtct 1953433  T
Q  211 tatttgtcaaatttattttatatatagttttgtaacaattgatgcttgacagtttggtcaaaggattaaatcacatttcctatt 294  Q
     |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  1953434 catttgtcaaatttattatatatttagttttgtaacaattgatgcttcacagtttggtcaaaggcttaaatcacatttcctatt 1953517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 47580079 - 47580148
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaa 182  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||    
T  47580079 tgttttatttttaagttgatattatatttcaaaagttattaaaaattgtttgtta-tttttgttgatttaa 47580148  T

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Target: chr6 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 110 - 294
Target Start/End: Complemental strand, 6950242 - 6950058
Alignment:
Q  110 tttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcc 209  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6950242 tttgctgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcc 6950143  T
Q  210 ttatttgtcaaatttattttatatatagttttgtaacaattgatgcttgacagtttggtcaaaggattaaatcacatttcctatt 294  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||| ||| |||| ||||||||||    
T  6950142 ttatttgtcaaatttattttatatttagttttgtatcaattgatgcttaaccgtttggtcaaaggcttacatcagatttcctatt 6950058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 19698363 - 19698238
Alignment:
Q  109 ttttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  19698363 ttttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgtttattatttgttgttgatttaaccatgttatatttacttagtcaaagc 19698264  T
Q  209 cttatttgtcaaatttattttatata 234  Q
    ||||||||||| | ||||||| ||||    
T  19698263 cttatttgtcacaattattttttata 19698238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 112 - 294
Target Start/End: Complemental strand, 4327414 - 4327234
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcctt 211  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  4327414 tgttgtatttttaagttgatattatatttcagaggttattaaaagttgttcattattttt-gttgatttaaccatgtgatatttacttagtcaaaacctt 4327316  T
Q  212 atttgtcaaatttattttatatatagttttgtaacaattgatgcttgacagtttggtcaaaggattaaatcacatttcctatt 294  Q
    ||||| |||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  4327315 atttgccaaatttattttatatttagttttgtaacaattgatgtttgaca-tttggtcaaaggcttaaatcacatttcctatt 4327234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 21185794 - 21185678
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcctt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  21185794 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattatttattgttgatttaaccatgtgatatttacttagtcaaaacctt 21185695  T
Q  212 atttgtcaaatttattt 228  Q
    |||||||| ||||||||    
T  21185694 atttgtcatatttattt 21185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 1789419 - 1789297
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcctt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  1789419 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgtttattgtttgttgttgatttaaccatgtgatatttacttagtcaaagcctt 1789320  T
Q  212 atttgtcaaatttattttatata 234  Q
    |||||||| ||||||||| ||||    
T  1789319 atttgtcacatttattttttata 1789297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 111 - 294
Target Start/End: Complemental strand, 11634725 - 11634542
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||     
T  11634725 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattatttgttgttgatttaatcatgtgatatttacttagtcaaagccc 11634626  T
Q  211 tatttgtcaaatttattttatatatagttttgtaacaattgatgcttgacagtttggtcaaaggattaaatcacatttcctatt 294  Q
    ||||| ||||||||||| ||||| || |||| |||| |||||| |||||| ||||||||||||| ||||||| |||| ||||||    
T  11634625 tatttatcaaatttattatatatttatttttctaactattgatacttgacggtttggtcaaaggcttaaatctcattccctatt 11634542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 42258314 - 42258194
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcctt 211  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  42258314 tgttgtatttttgagtt-atattacatttcaaaagttattaaaagttgttcattatttattgttaatttaaccatgtgatatttacctagtcaaagcctt 42258216  T
Q  212 atttgtcaaatttattttatat 233  Q
    |||| |||||||||||||||||    
T  42258215 atttatcaaatttattttatat 42258194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 42254195 - 42254072
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaa-gttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcc 209  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||||||  |||||||||||    
T  42254195 ttgttgtatttttgagttgatattatatttcaaaaagttattaaaagttgttcattatttattgtgaatttaaccatgtgatatttatctagtcaaagcc 42254096  T
Q  210 ttatttgtcaaatttattttatat 233  Q
    || ||| |||||||||||||||||    
T  42254095 ttctttatcaaatttattttatat 42254072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 11641234 - 11641110
Alignment:
Q  130 atattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagccttatttgtcaaatttatttt 229  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||    
T  11641234 atattatatttccaaagttattaaaagttgttcattatttgttgttgatttatcaatgtgatatttatttagtcaaagcgttatttgtcaaatttatttt 11641135  T
Q  230 atatatagttttgtaacaattgatg 254  Q
    |||  || ||||||||| |||||||    
T  11641134 ataattatttttgtaactattgatg 11641110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 19930664 - 19930552
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcct 210  Q
    ||||||||||||||||| |||||||||||          |||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||||    
T  19930664 ttgttgtatttttgagtagatattatatt----------ttaaaagttgttcattatttattgttaatttaaccatgtgatatttacctagtcatagcct 19930575  T
Q  211 tatttgtcaaatttattttatat 233  Q
     |||| |||||||||||||||||    
T  19930574 aatttatcaaatttattttatat 19930552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 19935680 - 19935631
Alignment:
Q  109 ttttgttgtatttttgagttgatattatatttcaaaagttattaaaagtt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19935680 ttttgttgtatttttgagttgatattatatttcaaaagttattaaaagtt 19935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 19935632 - 19935593
Alignment:
Q  194 ttacttagtcaaagccttatttgtcaaatttattttatat 233  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  19935632 ttacctagtcaaagccttatttatcaaatttattttatat 19935593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 2590085 - 2590206
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcct 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||    
T  2590085 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattacttgttgttgatttaaccatgtgatatttacttagtcaaaacct 2590184  T
Q  211 tatttgtcaaatttattttata 232  Q
    ||||||||| | ||||||||||    
T  2590185 tatttgtcacaattattttata 2590206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 34564342 - 34564447
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcctt 211  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34564342 tgttgtatttttgagttgatattatattttaaaagttattaaaagttgtttattatttgttgttgatttaaccatgtgatatttacttagtcaaagcctt 34564441  T
Q  212 atttgt 217  Q
    ||||||    
T  34564442 atttgt 34564447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 18739626 - 18739504
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcctt 211  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  18739626 tgttgtagttttgagttgatattatattttaaaagttattaaaagttgtttattatttgttgttgatttaaccatgtgatatttacttagtcaaaacctt 18739527  T
Q  212 atttgtcaaatttattttatata 234  Q
    |||||||| | ||||||| ||||    
T  18739526 atttgtcacaattattttttata 18739504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 35969771 - 35969734
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagtt 148  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  35969771 ttgttgtatttttcagttgatattatatttcaaaagtt 35969734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 86621 - 86744
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagcct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  86621 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgtttattatttgttagtgatttaaccatgtgatatttacttagtcaaagcct 86720  T
Q  211 tatttgtcaaatttattttatata 234  Q
    || |||||| | ||||||| ||||    
T  86721 tacttgtcacaattattttttata 86744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 82233 - 82314
Alignment:
Q  112 tgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtc 203  Q
    |||||||||||||||||||||||||||||||||||||          ||| ||||||| ||||||||||||| |||||||||||||||||||    
T  82233 tgttgtatttttgagttgatattatatttcaaaagtt----------gtttattatttgttgttgatttaacgatgtgatatttacttagtc 82314  T

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Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 11673603 - 11673716
Alignment:
Q  116 gtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagccttattt 215  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  11673603 gtatttttgagttgatattatatttcaaaagttattaaaatttgtttattatttgttgttgatttaaccatgtgatatttacttagtcaaagtcttattt 11673702  T
Q  216 gtcaaatttatttt 229  Q
    |||| | |||||||    
T  11673703 gtcacaattatttt 11673716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 39426724 - 39426629
Alignment:
Q  111 ttgttgtatttttgagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaa 206  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39426724 ttgttgtatttttaagttgatattatatttcaaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttaatcaaa 39426629  T

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Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 3851070 - 3850918
Alignment:
Q  142 aaaagttattaaaagttgttcattattttttgttgatttaaccatgtgatatttacttagtcaaagccttatttgtcaaatttattttatatatagtttt 241  Q
    ||||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||||  || ||||    
T  3851070 aaaagttattaaatgttgttcattatttgttgttgatttaatcaagtgatatttacttagtcaaagtcttatttatcaaatttattttataattattttt 3850971  T
Q  242 gtaacaattgatgcttgacagtttggtcaaaggattaaatcacatttcctatt 294  Q
    ||||   |||||||||||| || |||||||||| ||||||| |||| ||||||    
T  3850970 gtaattgttgatgcttgacggtatggtcaaaggcttaaatctcattccctatt 3850918  T

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Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 5756624 - 5756715
Alignment:
Q  18 gaactcttcaagattcctaataaatgtaatgttttttactcaagactgaatgctgggttgagcttacatagctgcaatgcggagaagtttat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  5756624 gaactcttcaagattcctaataaatgtaatgttttttactcaagactgtatgctgagttgagcttacatagctgcaatgcggtgaagtttat 5756715  T

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Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 5752710 - 5752803
Alignment:
Q  18 gaactcttcaagattcctaataaatgtaatgttttttactcaagactgaatgctgggttgagcttacatagctgcaatgcggagaagtttattt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||||    
T  5752710 gaactcttcaagattcctaataaatgtaatgttttttactcaagactgtatactgagttgagcttacatagctgcaatgcggtgaagtttattt 5752803  T

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