View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9971_low_9 (Length: 428)
Name: NF9971_low_9
Description: NF9971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9971_low_9 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 369; Significance: 0; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 19 - 415
Target Start/End: Original strand, 9838621 - 9839017
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838621 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
9838720 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838721 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
9838820 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||| ||| ||| |
|
|
| T |
9838821 |
tgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgg |
9838920 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
9838921 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
9839017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 19 - 415
Target Start/End: Original strand, 9849499 - 9849895
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849499 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
9849598 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849599 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
9849698 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||| ||| ||| |
|
|
| T |
9849699 |
tgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattttgatatgagggcgtgg |
9849798 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
9849799 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataatcttgatgtcc |
9849895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 20 - 415
Target Start/End: Complemental strand, 10376153 - 10375758
Alignment:
| Q |
20 |
tcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcagg |
119 |
Q |
| |
|
|||||||||||||| ||||| | | ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
10376153 |
tcatgtgtgatagcctgcaattctttgcacagtataaagatatacttggtctgcaaactaaaagtggtagagtttctcgtagaacaccttcaagttcagt |
10376054 |
T |
|
| Q |
120 |
ggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgtt |
219 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||| ||||| || |||||||||||||||||||| | | ||||||| | ||||| |||||||||||| |
|
|
| T |
10376053 |
ggtaaatgaatctgtcatggtgggtaggaaggatgataaagacactataatgaacatgttgctatcagagacagacacatcgcataataatataggtgtt |
10375954 |
T |
|
| Q |
220 |
gttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatggg |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375953 |
gttgcaattttgggcatgggaggtttaggaaaaactacccttgcacaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatggg |
10375854 |
T |
|
| Q |
320 |
cttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375853 |
cttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
10375758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 19 - 411
Target Start/End: Original strand, 11768994 - 11769386
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
11768994 |
atcatgtgtgaaagcctgcaactttttgcacaaaataaagatatattaggtttgcaaactaaaagtgctagagtttctcgtagaacaccttcaagttcag |
11769093 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| |||||| ||||||||||| |
|
|
| T |
11769094 |
tggtaaatgaatctgtcatagtgggtaggaagaatgacaaagagacaataatgaacatgttgctatcacagagagacacaatccataataatataggtgt |
11769193 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
11769194 |
tgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtctacaatgataaagaagttcaacaatattttgatttgaaggcatgg |
11769293 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgat |
411 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11769294 |
gcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctccttgaatcggtcacttcaagaacttgggatagcaataatcttgat |
11769386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 415
Target Start/End: Complemental strand, 10434353 - 10433957
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||| ||||| ||||| | |
|
|
| T |
10434353 |
atcatgtgtgaaagcttgcaactttttgcacagaataaagatatacttggtctgcaaaccaaaagtgggagagtttctcatagaaatccttcaagttctg |
10434254 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
||| ||||||||| || |||| || ||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||| ||||| || |||||||| |
|
|
| T |
10434253 |
tggtcaatgaatctttcatggttggaaggaaggatgacaaagagacaataatgaacatgttgctatcacagagaaacacaactcataataagataggtgt |
10434154 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||| |
|
|
| T |
10434153 |
tgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcctgg |
10434054 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
10434053 |
gcttgtgtgtctcaggattttgatattttgaaagtaaccaagtctctccttgaatcggtcacttccagaacttgggatagcaataatcttgatgtcc |
10433957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 81 - 415
Target Start/End: Original strand, 10126750 - 10127084
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
180 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10126750 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10126849 |
T |
|
| Q |
181 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatg |
280 |
Q |
| |
|
|||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
10126850 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
10126949 |
T |
|
| Q |
281 |
atgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
380 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
10126950 |
ataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcac |
10127049 |
T |
|
| Q |
381 |
ttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
||| | ||| ||||||||||||||||||||||||| |
|
|
| T |
10127050 |
ttccacaacttgggatagcaataatcttgatgtcc |
10127084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 81 - 415
Target Start/End: Original strand, 10663348 - 10663682
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
180 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663348 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
10663447 |
T |
|
| Q |
181 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatg |
280 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10663448 |
ctatcacagagagacacaacccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
10663547 |
T |
|
| Q |
281 |
atgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
380 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
10663548 |
ataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcac |
10663647 |
T |
|
| Q |
381 |
ttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
||| | ||| ||||||||||| |||||||||||| |
|
|
| T |
10663648 |
ttccacaacttgggatagcaaagatcttgatgtcc |
10663682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 19 - 415
Target Start/End: Original strand, 10088550 - 10088946
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||| ||||||||| | | ||||||||||||||||||||||||| |||||||||||| || || ||||| | |||||| ||||| ||||| | |
|
|
| T |
10088550 |
atcatgtgtgaaagcttgcaattgtttgcacagaataaagatatacttggtctgcaaactaaaatcgcaagggtttcacatagaactccttcaagttcgg |
10088649 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| || | ||||| |||||| | || ||||||||||| |
|
|
| T |
10088650 |
tggtaaatgaatctgtcatggtgggtaggaaggatgataaagagacaataatgaacatgttgctttcaaagagagaaacaaccgacaataatataggtgt |
10088749 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
10088750 |
tgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcatgg |
10088849 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| |||||| ||||| |
|
|
| T |
10088850 |
gtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtcc |
10088946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 19 - 415
Target Start/End: Original strand, 10195433 - 10195829
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||| ||||||||| | | ||||||||||||||||||||||||| |||||||||||| || || ||||| | |||||| ||||| ||||||| |
|
|
| T |
10195433 |
atcatgtgtgaaagcttgcaattgtttgcacagaataaagatatacttggtctgcaaactaaaaacgcaagggtttcacatagaactccttcaagttcag |
10195532 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||| || | ||||| |||||| | || ||||||||||| |
|
|
| T |
10195533 |
tggtaaatgaatctgtcatggtgggtagaaaggatgataaagagacaataatgaacatgttgctttcaaagagagaaacaaccgacaataatataggtgt |
10195632 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
10195633 |
tgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaaggcatgg |
10195732 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| |||||| ||||| |
|
|
| T |
10195733 |
gtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatcttggtgtcc |
10195829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 19 - 415
Target Start/End: Complemental strand, 10364107 - 10363711
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||| ||| |||||| || || | ||| |||||||||||| |||||||||||||||| | || ||||| |||||||||||||| ||||||| |
|
|
| T |
10364107 |
atcatgtgtgaaagcctgcaacattttgaaaagagaaaagatatacttcgtttgcaaactaaaagcacaagggtttcacgtagaacaccttcaagttcag |
10364008 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || | ||||| |||||| | || ||||||||||| |
|
|
| T |
10364007 |
tggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctttcaaagagagaaacaaccgacaataatataggtgt |
10363908 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
10363907 |
tgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttgatttgaaggcatgg |
10363808 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
| |||||| |||||||||||||||||| |||||||||| ||||||||||||||||| | |||||| | ||| | ||| ||||||||||||||||||| |
|
|
| T |
10363807 |
gtttgtgtctctgaggattttgatattatgagagtaacaaagtctctccttgaatctgccacttccataacttcggaaagcaataatcttgatgtcc |
10363711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 53 - 415
Target Start/End: Original strand, 10580395 - 10580757
Alignment:
| Q |
53 |
ataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaaggg |
152 |
Q |
| |
|
|||||||| | ||||||||||||||||| |||||||||||||||| | |||| ||||| ||||| | | | || ||||||||| ||||||||||||||| |
|
|
| T |
10580395 |
ataaagatgtccttggtttgcaaactaagagtgctagagtttctcatggaactccttcaagttctgtgtttaacgaatctgtcatggtgggtaggaagga |
10580494 |
T |
|
| Q |
153 |
tgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580495 |
tgacaaagagacaataatgaacatgttgctatcacagagaaacacaatccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaa |
10580594 |
T |
|
| Q |
253 |
actaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagag |
352 |
Q |
| |
|
|||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
10580595 |
actacccttgcccaacttgtttacaatgataaagaagttcaacaacattttgacatgaaggcgtgggtttgtgtgtctgaggattttgatattatgagag |
10580694 |
T |
|
| Q |
353 |
taaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| | ||| | ||| ||||||||||||||||||| |
|
|
| T |
10580695 |
taacaaagtctctccttgaatctgtcacttccacaacttcggaaagcaataatcttgatgtcc |
10580757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 81 - 415
Target Start/End: Original strand, 10031825 - 10032159
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
180 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| ||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10031825 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10031924 |
T |
|
| Q |
181 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatg |
280 |
Q |
| |
|
||||| || |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10031925 |
ctatcacagagagacgcatcccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
10032024 |
T |
|
| Q |
281 |
atgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
380 |
Q |
| |
|
|| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
10032025 |
ataaagaagttcaacaacattttgatttgaaggcctgggcttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcac |
10032124 |
T |
|
| Q |
381 |
ttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
||| | ||| | ||||||||| |||||||||||| |
|
|
| T |
10032125 |
ttccacaacttcggatagcaaagatcttgatgtcc |
10032159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 81 - 415
Target Start/End: Original strand, 10184064 - 10184398
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
180 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10184064 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10184163 |
T |
|
| Q |
181 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatg |
280 |
Q |
| |
|
|| || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
10184164 |
ctgtcacagagagacacaacccataatgctataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatg |
10184263 |
T |
|
| Q |
281 |
atgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
380 |
Q |
| |
|
|| || |||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
10184264 |
ataaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtccgaggattttgatattatgagagtaaccaagtctctccttgaatctgtcac |
10184363 |
T |
|
| Q |
381 |
ttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
||| | ||| ||||||||||||||||||||||||| |
|
|
| T |
10184364 |
ttccacaacttgggatagcaataatcttgatgtcc |
10184398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 415
Target Start/End: Original strand, 10077026 - 10077425
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagt---ttctcgtagaacaccttctagtt |
115 |
Q |
| |
|
||||||||||| || |||||| | | |||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||| |||| |
|
|
| T |
10077026 |
atcatgtgtgaaaggttgcaattgtttgcacagaataaagatgtacttggtctgcaaactaaaattgctagagtaatttctcgtagaacaccttcaagtt |
10077125 |
T |
|
| Q |
116 |
caggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatatagg |
215 |
Q |
| |
|
||| |||||||||||||| |||| |||| | || |||||||||||||||||||||||||||||||||| | | | ||||||||| || ||||| |
|
|
| T |
10077126 |
cagtggtaaatgaatctgagatggttggtatggagcgtgacaaagagacaataatgaacatgttgctatcagggatgggcggaacccataataagatagg |
10077225 |
T |
|
| Q |
216 |
tgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggca |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| | | |||||||||||| ||||| |
|
|
| T |
10077226 |
tgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgattataaagttcgataccattttgatttgcaggca |
10077325 |
T |
|
| Q |
316 |
tgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||| |||||||||||| |
|
|
| T |
10077326 |
tgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcgatcacttctagaacttgggataacaatgatcttgatgtcc |
10077425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 81 - 410
Target Start/End: Original strand, 10260520 - 10260849
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
180 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10260520 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
10260619 |
T |
|
| Q |
181 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatg |
280 |
Q |
| |
|
||||| || ||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
10260620 |
ctatcacagagagaaacaaccaacaataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatg |
10260719 |
T |
|
| Q |
281 |
atgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
380 |
Q |
| |
|
|| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
10260720 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcagtcac |
10260819 |
T |
|
| Q |
381 |
ttcaagaacatgggatagcaataatcttga |
410 |
Q |
| |
|
||| |||| ||||||| |||||||||||| |
|
|
| T |
10260820 |
ttctagaaattgggatatcaataatcttga |
10260849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 21 - 411
Target Start/End: Complemental strand, 11131333 - 11130943
Alignment:
| Q |
21 |
catgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggg |
120 |
Q |
| |
|
||||||||| | | ||||| ||| |||||| || |||||||| |||||||| |||||||||||||||||| ||| | |||||||||||||||||| | | |
|
|
| T |
11131333 |
catgtgtgacaacctgcaaatttttgcacaaaacaaagatatccttggtttacaaactaaaagtgctagaattttccatagaacaccttctagttctgtg |
11131234 |
T |
|
| Q |
121 |
gtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttg |
220 |
Q |
| |
|
|| |||||||| || |||| ||||| |||| ||||||||||||||||| ||||||||||||||| | || ||| | | |||||||||| ||||||| |
|
|
| T |
11131233 |
gttaatgaatcattcatggttggtagaaaggatgacaaagagacaataacgaacatgttgctatcaaagagcagcactagcaataacaatatcggtgttg |
11131134 |
T |
|
| Q |
221 |
ttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggc |
320 |
Q |
| |
|
|||||||||| || ||||||||| | |||||||| ||||| || ||| ||| |||||||||||||||||||||| |||| |||||| | || |||||||| |
|
|
| T |
11131133 |
ttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactttgatctcaaagcatgggc |
11131034 |
T |
|
| Q |
321 |
ttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgat |
411 |
Q |
| |
|
|||||| || ||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| | ||||| | ||||||||||||| |
|
|
| T |
11131033 |
ttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttcaagggcttgggaaaacaataatcttgat |
11130943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 21 - 411
Target Start/End: Complemental strand, 11149161 - 11148771
Alignment:
| Q |
21 |
catgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggg |
120 |
Q |
| |
|
||||||||| | | ||||| ||| |||||| || |||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||||| | | |
|
|
| T |
11149161 |
catgtgtgacaacctgcaaatttttgcacaaaacaaagatatccttggtttgcaaactaaaagtgctagaattttccatagaacaccttctagttctgtg |
11149062 |
T |
|
| Q |
121 |
gtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttg |
220 |
Q |
| |
|
|| |||||||| || |||| ||||| |||| ||||||||||| ||||| ||||||||||||||| | || ||| | | |||||||||| ||||||| |
|
|
| T |
11149061 |
gttaatgaatcattcatggttggtagaaaggatgacaaagagataataacgaacatgttgctatcaaagagcagcactagcaataacaatatcggtgttg |
11148962 |
T |
|
| Q |
221 |
ttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggc |
320 |
Q |
| |
|
|||||||||| || ||||||||| | |||||||| ||||| || ||| ||| |||||||||||||||||||||| |||| |||||| | || |||||||| |
|
|
| T |
11148961 |
ttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactttgatctcaaagcatgggc |
11148862 |
T |
|
| Q |
321 |
ttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgat |
411 |
Q |
| |
|
|||||| || ||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| | ||||| | ||||||||||||| |
|
|
| T |
11148861 |
ttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttcaagggcttgggaaaacaataatcttgat |
11148771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 19 - 407
Target Start/End: Original strand, 10889066 - 10889454
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||||| || || ||||||||||||||| ||||| ||||||| |
|
|
| T |
10889066 |
atcatgtgtaatagcttgcaactttttgcacaacataaagatatccttggtttgcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcag |
10889165 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|| |||||||||||| |||| ||||| || | ||| ||||||||||||||||||||||||||||| | || ||| | |||||||||| ||||| |
|
|
| T |
10889166 |
tagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgctatcagagagcagcactaggaataacaatatcggtgt |
10889265 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||| || ||||||||| | || ||||| || || || |||||||||||||||||||||||||||||| | || |||||| | || |||||| |
|
|
| T |
10889266 |
tgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatctcaaagcatgg |
10889365 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatct |
407 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||| || |||| |||||||| || ||||||||| | ||||| | ||||||||| |
|
|
| T |
10889366 |
gcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtgacttcaagagcttgggaaaacaataatct |
10889454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 19 - 411
Target Start/End: Complemental strand, 11160326 - 11159934
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| ||||| || || ||||||||||||||| ||||| ||||||| |
|
|
| T |
11160326 |
atcatgtgtgatagcttgcaacttttcgcacaacataaagatatccttggtttgcaaagtaaaattggtaaagtttctcgtagaaccccttcaagttcag |
11160227 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|| |||| ||||||| |||| ||||| || | ||| ||||||||||||||||||||||||||||| | || ||| | ||||||||||||| || |
|
|
| T |
11160226 |
tagttaatgcatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgctatcagagagtagcactggcaataacaatataggcgt |
11160127 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||| || ||||||||| | || ||||| || || || ||||||||||||||| |||||||||||||| | ||||||||||| || |||||| |
|
|
| T |
11160126 |
tgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaataatgaaaaagttcaagatcattttgatttcaaagcatgg |
11160027 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgat |
411 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| || |||| |||||||| |||||||||||| | ||||| | ||||||||||||| |
|
|
| T |
11160026 |
gcttgtgtatctgaggattttgatattttatctgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaccaataatcttgat |
11159934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 19 - 411
Target Start/End: Original strand, 8861046 - 8861438
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||| || || ||||||||||||||| ||||| ||||||| |
|
|
| T |
8861046 |
atcatgtgtgatagcttgcaaattttcgcacaacataaagatatccttggtttgcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcag |
8861145 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgt |
218 |
Q |
| |
|
|| |||||||||||| |||| ||||| || | ||| ||||||||| ||||||||||||||||||| | || ||| | |||||||||| ||||| |
|
|
| T |
8861146 |
tagttaatgaatctgtcatggttggtagaaatgatgataaagagacagtaatgaacatgttgctatcagagagcagcactaggaataacaatatcggtgt |
8861245 |
T |
|
| Q |
219 |
tgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgg |
318 |
Q |
| |
|
|||||||||||| || ||||||||| | || ||||| || || || |||||||||||||||||||||||||||||| | || |||||| | || |||||| |
|
|
| T |
8861246 |
tgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatctcaaagcatgg |
8861345 |
T |
|
| Q |
319 |
gcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgat |
411 |
Q |
| |
|
|||||||| || |||||||||||||||| | ||||| || |||| |||||||| |||||||||||| | ||||| | ||||||||||||| |
|
|
| T |
8861346 |
gcttgtgtatcagaggattttgatatttcaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatcttgat |
8861438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 203 - 374
Target Start/End: Original strand, 10527281 - 10527452
Alignment:
| Q |
203 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattt |
302 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||| ||||||||| | || ||||| ||||| || ||||||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
10527281 |
ataataatttaggtgttgttgcaatcttgggtatgggaggtgtcggtaaaacaacccttgcacaacttgtttacaatgatgaaaaggttgaacaccattt |
10527380 |
T |
|
| Q |
303 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
374 |
Q |
| |
|
|||| | ||||| |||| || ||| || |||||||| ||| || |||||||||||||||||||| ||||||| |
|
|
| T |
10527381 |
tgatctcaaggcctgggtttatgtatcagaggatttcgatgttgtgagagtaaccaagtctctcattgaatc |
10527452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 81 - 374
Target Start/End: Original strand, 10500375 - 10500671
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
180 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| | ||| ||||| | | | | || |||||| |
|
|
| T |
10500375 |
aagtggtagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaatgatgataaagatagactcgtcaatatgttg |
10500474 |
T |
|
| Q |
181 |
ctatctcaaagagacacaaccc---ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttaca |
277 |
Q |
| |
|
|||| | | | ||| | |||| ||| |||||||||||||||||||||| |||||||| | || ||||| || || || ||||||||||||| |
|
|
| T |
10500475 |
gtatcagatattggaacaggcagaaataataatttaggtgttgttgcaattttgggtatgggaggcgtcggtaaaacaacacttgctcaacttgtttaca |
10500574 |
T |
|
| Q |
278 |
atgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
374 |
Q |
| |
|
| || || ||| || || ||||||||||| ||||||||||| |||||| | |||||||| ||| || ||||| ||||||| |||||||||||||| |
|
|
| T |
10500575 |
acgacgataaaattgaagaacattttgatctgaaggcatggatttgtgtaccggaggatttcgatgttgtgagaataaccaaatctctccttgaatc |
10500671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 374
Target Start/End: Original strand, 10517408 - 10517579
Alignment:
| Q |
203 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattt |
302 |
Q |
| |
|
|||| ||| ||||||||| ||||||| |||| |||||||| | || ||||| ||||| || || ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
10517408 |
ataataatttaggtgttgctgcaattgtgggtatgggaggcgtcggtaaaacgacccttgcacagtttgtttacaatgatgcaaaagttgaacaacattt |
10517507 |
T |
|
| Q |
303 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
374 |
Q |
| |
|
|||||| || || |||| |||||| ||||||||||||||| || | |||| |||||||||| |||||||||| |
|
|
| T |
10517508 |
tgatttcaaagcctgggtttgtgtatctgaggattttgatgttattagagcaaccaagtctatccttgaatc |
10517579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 356
Target Start/End: Original strand, 13332680 - 13333001
Alignment:
| Q |
35 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
134 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || || |||||||||| |||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
13332680 |
tgcaactttttgcacaacagagagatattcttggcttgcaaactgtgagcgcgagagtttctcttagaacgccttcaagttcaatggtaaatgaatctgt |
13332779 |
T |
|
| Q |
135 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
234 |
Q |
| |
|
|||| |||||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | | | ||||| |||||||||||||| |
|
|
| T |
13332780 |
tatggttggtaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtgttggtgtggttgcaattttgggt |
13332879 |
T |
|
| Q |
235 |
atgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgagg |
334 |
Q |
| |
|
||||| ||| | || ||||| || || ||||||||| |||| |||||| || |||||||| | ||||||||| |||| | |||| |||||| || |||| |
|
|
| T |
13332880 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
13332979 |
T |
|
| Q |
335 |
attttgatattttgagagtaac |
356 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
13332980 |
atttcgatattctgagagtaac |
13333001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 203 - 374
Target Start/End: Complemental strand, 11782128 - 11781957
Alignment:
| Q |
203 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattt |
302 |
Q |
| |
|
|||| ||| |||||||||| ||||||||||| |||||||| | || ||||| ||||| || || |||||||||||||||| |||||| |||||||||| |
|
|
| T |
11782128 |
ataataatttaggtgttgtcgcaattttgggtatgggaggcgtcggtaaaacgacccttgcacagcttgtttacaatgatgtgaaagttgaacaacattt |
11782029 |
T |
|
| Q |
303 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
374 |
Q |
| |
|
|||||| || | |||| |||||| || |||||||| ||| || | ||| |||||||||||||||||||||| |
|
|
| T |
11782028 |
tgatttcaaagtctgggtttgtgtatcggaggatttcgatgttgttagaataaccaagtctctccttgaatc |
11781957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 353
Target Start/End: Original strand, 13343918 - 13344183
Alignment:
| Q |
88 |
agagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctc |
187 |
Q |
| |
|
|||||||||| ||||||||||| |||||| ||||||||||||||| |||| |||||||||| ||| ||||||| | | || | |||||| ||||| |
|
|
| T |
13343918 |
agagtttctctaagaacaccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctg |
13344017 |
T |
|
| Q |
188 |
aaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaa |
287 |
Q |
| |
|
| || | ||| ||| ||| | ||| ||||| |||||||||||||| ||||| ||| | || ||||| || || ||||||||| |||| |||||| || | |
|
|
| T |
13344018 |
acagtggcactaccaatagtagtattggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13344117 |
T |
|
| Q |
288 |
agttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagt |
353 |
Q |
| |
|
||||||| | ||||||||| |||| | |||| |||||| || |||||||| |||||| ||||||| |
|
|
| T |
13344118 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagt |
13344183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 88 - 356
Target Start/End: Original strand, 13289494 - 13289762
Alignment:
| Q |
88 |
agagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctc |
187 |
Q |
| |
|
|||||||||| |||||| ||||| |||||| ||||||| ||||||| |||| |||||||||| ||| ||||||| | | || | |||||| ||||| |
|
|
| T |
13289494 |
agagtttctcttagaacgccttcaagttcaatggtaaataaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctg |
13289593 |
T |
|
| Q |
188 |
aaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaa |
287 |
Q |
| |
|
| || | ||| ||| ||| | ||| ||||| || ||||||||||| ||||| ||| | || ||||| || || ||||||||| |||| |||||| || | |
|
|
| T |
13289594 |
acagtggcactaccaatagtagtattggtgtggtcgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13289693 |
T |
|
| Q |
288 |
agttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaac |
356 |
Q |
| |
|
||||||| | ||||||||| |||| | |||| |||||| || |||||||| ||||||||||||||||| |
|
|
| T |
13289694 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattttgagagtaac |
13289762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 356
Target Start/End: Original strand, 13160756 - 13161077
Alignment:
| Q |
35 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
134 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || || |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
13160756 |
tgcaactttttgcacaacaaagagatatccttggcttgcaaactgtgagcgcgagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
13160855 |
T |
|
| Q |
135 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
234 |
Q |
| |
|
|||| |||||||||| ||| || |||| | | | | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
13160856 |
tatggttggtaggaaggatgataaggagagactcgttagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
13160955 |
T |
|
| Q |
235 |
atgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgagg |
334 |
Q |
| |
|
||||| ||| | || ||||| || || ||||||||| |||| |||||| || |||||||| | ||||||||| |||| | |||| |||||| || |||| |
|
|
| T |
13160956 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
13161055 |
T |
|
| Q |
335 |
attttgatattttgagagtaac |
356 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
13161056 |
atttcgatattctgagagtaac |
13161077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 356
Target Start/End: Original strand, 13170807 - 13171128
Alignment:
| Q |
35 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
134 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || | |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
13170807 |
tgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
13170906 |
T |
|
| Q |
135 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
234 |
Q |
| |
|
|||| || ||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
13170907 |
tatggttggaaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
13171006 |
T |
|
| Q |
235 |
atgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgagg |
334 |
Q |
| |
|
||||| ||| | || ||||| || || ||||||||| |||| |||||| || |||||||| | ||||||||| |||| | |||| |||||| || |||| |
|
|
| T |
13171007 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
13171106 |
T |
|
| Q |
335 |
attttgatattttgagagtaac |
356 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
13171107 |
atttcgatattctgagagtaac |
13171128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 10527157 - 10527225
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaa |
149 |
Q |
| |
|
||||| |||| ||||||||||||| ||||| ||||||| |||||||||||||||| | ||||||||||| |
|
|
| T |
10527157 |
aagtgatagattttctcgtagaaccccttcaagttcagtggtaaatgaatctgtcattgtgggtaggaa |
10527225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 11782245 - 11782173
Alignment:
| Q |
89 |
gagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaaga |
161 |
Q |
| |
|
|||||||| |||||| ||||| ||||||| | ||||| |||||| ||||||||||||||| | ||| ||||| |
|
|
| T |
11782245 |
gagtttcttctagaaccccttcaagttcagtgctaaatcaatctgacgtggtgggtaggaatgatgataaaga |
11782173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 22 - 415
Target Start/End: Original strand, 26906660 - 26907053
Alignment:
| Q |
22 |
atgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcagggg |
121 |
Q |
| |
|
|||||||| ||| ||||| | | |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
26906660 |
atgtgtgaaagcctgcaattgtttgcacaacataaagatatccttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttcaagttcagtgg |
26906759 |
T |
|
| Q |
122 |
taaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgt |
221 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||||||||||| |
|
|
| T |
26906760 |
taaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaatatgttgctatcagagagagacacaacccataataatataggtgttgt |
26906859 |
T |
|
| Q |
222 |
tgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggct |
321 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||| | |
|
|
| T |
26906860 |
tgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttctttacaatgataaagaagttcaacggcattttgatttgaaggcatgggtt |
26906959 |
T |
|
| Q |
322 |
tgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaataatcttgatgtcc |
415 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
26906960 |
tgtgtgtctgaggattttgatattatgagagtaaccaaatctctccttgaatcggtcacttccagaacttgggataccaataatcttgatgtcc |
26907053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 374
Target Start/End: Complemental strand, 17853069 - 17852898
Alignment:
| Q |
203 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattt |
302 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| ||||||||| | || ||||| ||||| || || |||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
17853069 |
ataacaatttaggtgttgttgcaatattggggatgggaggtgtcggtaaaacgacccttgcacagcttgtttacaatgatgaaaaggttgaacatcattt |
17852970 |
T |
|
| Q |
303 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
374 |
Q |
| |
|
|||| | || || |||| |||||| || || ||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
17852969 |
tgatctcaaagcctgggtttgtgtatcagaagattttgatgttgtgagagtaaccaagtctctccttgaatc |
17852898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 17853194 - 17853126
Alignment:
| Q |
81 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaa |
149 |
Q |
| |
|
||||| |||||||||||||||||| ||||| ||||| | |||||||||||||||| |||| || ||||| |
|
|
| T |
17853194 |
aagtggtagagtttctcgtagaaccccttcaagttccgtggtaaatgaatctgtcatggtaggaaggaa |
17853126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 7129038 - 7128961
Alignment:
| Q |
265 |
caacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgat |
342 |
Q |
| |
|
|||||||| |||||||| || |||| |||||||||||||| ||||| ||||| |||||| ||||| ||||||||| |
|
|
| T |
7129038 |
caacttgtatacaatgacaaagaagtgcaacaacattttgagttgaaaaaatgggtttgtgtttctgatgattttgat |
7128961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 44958002 - 44957888
Alignment:
| Q |
35 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
134 |
Q |
| |
|
||||||||| ||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| | |
|
|
| T |
44958002 |
tgcaactttttgcacagcataaagatataattggtttggaaactaaaagtgctagagtttctcatagaacaccttcaagttcaggggttaatgaatctat |
44957903 |
T |
|
| Q |
135 |
cgtggtgggtaggaa |
149 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
44957902 |
tatggtgggcaggaa |
44957888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 203 - 374
Target Start/End: Original strand, 11484961 - 11485132
Alignment:
| Q |
203 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattt |
302 |
Q |
| |
|
|||| ||| ||||||||||||||||||||| |||||||| | || ||||| ||||| || |||||||||||||| |||||||||||| |||| ||||| |
|
|
| T |
11484961 |
ataataatttaggtgttgttgcaattttggttatgggaggcgtcggtaaaacgacccttgcacaacttgtttacaacgatgaaaaagttgaacagcattt |
11485060 |
T |
|
| Q |
303 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
374 |
Q |
| |
|
|||| | || ||||||| |||||| || |||||||| ||| | |||| |||||||||| ||||||||||| |
|
|
| T |
11485061 |
tgatctcaaagcatgggtttgtgtatcggaggatttcgatgtcgtgaggataaccaagtccctccttgaatc |
11485132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 373
Target Start/End: Complemental strand, 44957834 - 44957664
Alignment:
| Q |
203 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattt |
302 |
Q |
| |
|
|||| ||| ||||||||||||| | || || ||||||||| | || ||||| || ||||| |||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
44957834 |
ataataatttaggtgttgttgccaccttaggtatgggaggtgtcggtaaaacgactctcgcacaacttgtttacaatgatataaaagttgaacaacattt |
44957735 |
T |
|
| Q |
303 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaat |
373 |
Q |
| |
|
||| | || |||||| ||||| || |||||||| || || | ||| |||| |||||||| ||||||| |
|
|
| T |
44957734 |
cgatctcaaagcatggatatgtgtatcagaggatttcaatgttgttagaataacaaagtctcttcttgaat |
44957664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 11484842 - 11484904
Alignment:
| Q |
87 |
tagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaa |
149 |
Q |
| |
|
||||||||||||||||||||| || ||||||| ||| ||||||||||| ||||||| ||||| |
|
|
| T |
11484842 |
tagagtttctcgtagaacaccatcaagttcagtggtgaatgaatctgttatggtgggaaggaa |
11484904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 50117 - 49985
Alignment:
| Q |
19 |
atcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcag |
118 |
Q |
| |
|
||||||||||| ||| ||||||||| || | | | |||||||||||| |||||||||||||||| | || ||||| |||||||||||||| ||||||| |
|
|
| T |
50117 |
atcatgtgtgaaagcctgcaactttttgaaaaaagaaaagatatacttcgtttgcaaactaaaagcacaagggtttcacgtagaacaccttcaagttcag |
50018 |
T |
|
| Q |
119 |
gggtaaatgaatctgtcgtggtgggtaggaagg |
151 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |
|
|
| T |
50017 |
tggtaaatgaatctgtcatggtgggtaggaagg |
49985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 356
Target Start/End: Complemental strand, 146232 - 145911
Alignment:
| Q |
35 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
134 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || | |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
146232 |
tgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
146133 |
T |
|
| Q |
135 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
234 |
Q |
| |
|
|||| |||||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
146132 |
tatggttggtaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
146033 |
T |
|
| Q |
235 |
atgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgagg |
334 |
Q |
| |
|
||||| ||| | || ||||| || || ||||||||| |||| |||||| || |||||||| | ||||||||| |||| | |||| |||||| || |||| |
|
|
| T |
146032 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
145933 |
T |
|
| Q |
335 |
attttgatattttgagagtaac |
356 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
145932 |
atttcgatattctgagagtaac |
145911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 356
Target Start/End: Complemental strand, 136181 - 135860
Alignment:
| Q |
35 |
tgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgt |
134 |
Q |
| |
|
||||||||| |||||| | | |||||| ||||| ||||||||| || | |||||||||| ||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
136181 |
tgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttcaatggtaaatgaatctgt |
136082 |
T |
|
| Q |
135 |
cgtggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggc |
234 |
Q |
| |
|
|||| || ||||||| ||| ||||||| | | || | |||||| ||||| | || | ||| ||| ||| | ||| ||||| |||||||||||||| |
|
|
| T |
136081 |
tatggttggaaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaatagtagtattggtgtggttgcaattttgggt |
135982 |
T |
|
| Q |
235 |
atgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgagg |
334 |
Q |
| |
|
||||| ||| | || ||||| || || ||||||||| |||| |||||| || |||||||| | ||||||||| |||| | |||| |||||| || |||| |
|
|
| T |
135981 |
atgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaagtctgggtttgtgtatcggagg |
135882 |
T |
|
| Q |
335 |
attttgatattttgagagtaac |
356 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
135881 |
atttcgatattctgagagtaac |
135860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 411
Target Start/End: Original strand, 29836587 - 29836795
Alignment:
| Q |
203 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattt |
302 |
Q |
| |
|
|||| ||||||||||| || |||||| |||||||||||| | || ||||| |||||||| | |||| | ||||| | ||| ||||| || | ||||| |
|
|
| T |
29836587 |
ataataatataggtgtagtcgcaattacaggcatgggaggtatcggtaaaacgaccctcgctcgacttatatacaaccaggaagaagttaaaaatcattt |
29836686 |
T |
|
| Q |
303 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaat |
402 |
Q |
| |
|
|||| | | | |||| |||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||| ||| |||| |
|
|
| T |
29836687 |
tgatgtacaagtctgggtttgtgtgtctgaagattttgatatgttgagagtaaccaaatctctccttgaagttgtcacttcaagagaatggaataccaat |
29836786 |
T |
|
| Q |
403 |
aatcttgat |
411 |
Q |
| |
|
|| |||||| |
|
|
| T |
29836787 |
aaccttgat |
29836795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 358
Target Start/End: Complemental strand, 31679845 - 31679703
Alignment:
| Q |
216 |
tgttgttgcaattttgggcatgggaggtttaggaaaaactaccctcgcccaacttgtttacaatgatgaaaaagttcaacaacattttgatttgaaggca |
315 |
Q |
| |
|
||||||| ||||||| |||||||||||| | || ||||| |||| || |||||| ||||||||||| || | |||||| ||| ||||||| | || || |
|
|
| T |
31679845 |
tgttgtttcaattttcggcatgggaggtgtcggtaaaacagccctagctcaacttctttacaatgataaagatgttcaagaacgttttgatgtaaaagct |
31679746 |
T |
|
| Q |
316 |
tgggcttgtgtgtctgaggattttgatattttgagagtaacca |
358 |
Q |
| |
|
|||| |||| |||| || || |||||| ||||||| ||||||| |
|
|
| T |
31679745 |
tgggtttgtctgtccgaagagtttgatgttttgagggtaacca |
31679703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 31680024 - 31679876
Alignment:
| Q |
37 |
caactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcg |
136 |
Q |
| |
|
||||||| |||||| | |||||||| ||||| ||||||||| ||||| ||| |||| || |||||||||||| |||||| ||| || ||||| || |
|
|
| T |
31680024 |
caactttttgcacaacaaaaagatatccttgggttgcaaactgtaagtggtagggtttttcttagaacaccttcaagttcactagtagatcaatctttca |
31679925 |
T |
|
| Q |
137 |
tggtgggtaggaagggtgacaaagagacaataatgaacatgttgctatc |
185 |
Q |
| |
|
|||| ||||||||| |||| ||||||| | ||| || ||||||||||| |
|
|
| T |
31679924 |
tggttggtaggaagagtgataaagagaaactaactaatatgttgctatc |
31679876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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