View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9973_low_4 (Length: 253)
Name: NF9973_low_4
Description: NF9973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9973_low_4 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 8717148 - 8717003
Alignment:
| Q |
1 |
taaatcccaaaagtaaaatatttgtacgtttcaccaaatttttgttcaatttctcttatgggtgtctacttattaatgtacaaggttatgcgaatcccaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8717148 |
taaatcccaaaagtaaaatatttgtacgtttcaccaaatttttgttcaatttctcttatgggtgtctacttatttatgtacaaggttatgcgaatcccaa |
8717049 |
T |
 |
| Q |
101 |
tgttgatagtgaggttttttaccatgcaaactctatatcattttac |
146 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
8717048 |
tgttgatagtgaggttgtttaccatgcaaaatctatatcattttac |
8717003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 9069035 - 9068890
Alignment:
| Q |
1 |
taaatcccaaaagtaaaatatttgtacgtttcaccaaatttttgttcaatttctcttatgggtgtctacttattaatgtacaaggttatgcgaatcccaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
9069035 |
taaatcccaaaagtaaaatatttgtacgtttcaccaaatttttgttcaatttctcttatgggtgtctacttatttatgtacaaggttatgcgaatcccaa |
9068936 |
T |
 |
| Q |
101 |
tgttgatagtgaggttttttaccatgcaaactctatatcattttac |
146 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
9068935 |
tgttgatagtgaggttgtttaccatgcaaaatctatatcattttac |
9068890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 26847825 - 26847736
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| | |||| ||||||||| |
|
|
| T |
26847825 |
gaatgatatgtgaacaatcaaattgtacaaccaacaacttatttgctatttttaatgatattttgcatgattttgttttccgtgctcctc |
26847736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 2043735 - 2043823
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcct |
238 |
Q |
| |
|
|||||||||| || ||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
2043735 |
gaatgatatgtaaataactaaattgtacaaccaacaacttatttgctatctttaatgatattttgattgatttcgatttatgtgctcct |
2043823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 8723473 - 8723350
Alignment:
| Q |
25 |
tacgtttcaccaaatttttgttcaatttctcttatgggtgtctacttattaatgtac----------aaggttatgcgaatcccaatgttgatagtgagg |
114 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||| |||||| ||| || ||||||||| |||||||||||||||| ||||| |
|
|
| T |
8723473 |
tacgtttcaccaaatttttgttcaactgctcttatgggtgtctgcttatttatgaacaaggttgaataaggttatgtgaatcccaatgttgatcgtgaga |
8723374 |
T |
 |
| Q |
115 |
ttttttaccatgcaaactctatat |
138 |
Q |
| |
|
|| ||||||||||||||||||||| |
|
|
| T |
8723373 |
ttctttaccatgcaaactctatat |
8723350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 9075360 - 9075237
Alignment:
| Q |
25 |
tacgtttcaccaaatttttgttcaatttctcttatgggtgtctacttattaatgtac----------aaggttatgcgaatcccaatgttgatagtgagg |
114 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||| |||||| ||| || ||||||||| |||||||||||||||| ||||| |
|
|
| T |
9075360 |
tacgtttcaccaaatttttgttcaactgctcttatgggtgtctgcttatttatgaacaaggttgaataaggttatgtgaatcccaatgttgatcgtgaga |
9075261 |
T |
 |
| Q |
115 |
ttttttaccatgcaaactctatat |
138 |
Q |
| |
|
|| ||||||||||||||||||||| |
|
|
| T |
9075260 |
ttctttaccatgcaaactctatat |
9075237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 40034732 - 40034820
Alignment:
| Q |
151 |
aatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| ||||||||| |||||||||| ||||||| | |||||| ||||| ||||||||| |
|
|
| T |
40034732 |
aatgatatgtgaacattcaaattgtacaaccaacaacttatttattatttttaataatattttacatgattttaatttccgtgctcctc |
40034820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 15434416 - 15434505
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15434416 |
gaatgatatgtgaacaaccaaattgtacaaccaacaacttatttgctacttttaatgatattttgcttgattttgatttctgtgctcctc |
15434505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 900889 - 900978
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| | |||| |||||||| |
|
|
| T |
900889 |
gaatgatatgtgaacaaccaaattgtacaaccaacaacttatttgctatttttaatgatattttgcatgattttgttttccatgctcctc |
900978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 2250330 - 2250419
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| ||| || |||||||||||| ||| || |||||| |||||||||||||||||||| |||||| |||||| || |||||| |
|
|
| T |
2250330 |
gaatgatatgtgaagaatcaaattgtacaatcaacaatttatttattatttttaatgatattttgcatgattttgatttccgtactcctc |
2250419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 30839962 - 30840003
Alignment:
| Q |
198 |
tttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
30839962 |
tttttaataatattttgcttgatttcgatttctgtactcctc |
30840003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 30839723 - 30839778
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaat |
205 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||| || ||| |||||||||||||| |
|
|
| T |
30839723 |
gaatgatatgtgaacaactaaattgtacgaccaacaatttacttgctatttttaat |
30839778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 38174624 - 38174713
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
38174624 |
gaatgatacgtgaacaaccaaattgtacaaccaataacttacttgatatttttaataatattttgcttgatttcgatttctgtgctcctc |
38174713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 6494747 - 6494833
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctc |
236 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||| |||||| |
|
|
| T |
6494747 |
gaatgatatgtgaacaacaaaattgtacaatcaataacttatttgctatttttaatgatattttgcatgattttgttttccgtgctc |
6494833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 45849577 - 45849487
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttga-tttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||| |||||||||| |
|
|
| T |
45849577 |
gaatgatacgtgaacaaccaaattgtacaaccaataatttatttgctatttttaataatattttgcttgattttcaatttatgtgctcctc |
45849487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 44732536 - 44732493
Alignment:
| Q |
161 |
gaacaaccaaattgtacaaccaataacttatttgctatttttaa |
204 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
44732536 |
gaacaatcaatttgtacaaccaataacttatttgttatttttaa |
44732493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 29396448 - 29396537
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
29396448 |
gaatgatatgtgaacagccaaattgtacaaccaacaacttatttgctatttttaatgatattttgattgatttcgatttttgtgctcctc |
29396537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 22956984 - 22957072
Alignment:
| Q |
151 |
aatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
||||||||| || ||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||||| |||||||||| |
|
|
| T |
22956984 |
aatgatatgtaaataaccaaattgtacaaccaacaacttacttgctatttttaataatattttacttgatttcgatttatgtgctcctc |
22957072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 23831408 - 23831320
Alignment:
| Q |
151 |
aatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
||||||||| || ||||||||||||||||||| |||||| |||||||||||||| ||||||| |||||||||||||| |||||||||| |
|
|
| T |
23831408 |
aatgatatgtaaataaccaaattgtacaaccaacaacttacttgctatttttaataatattttacttgatttcgatttatgtgctcctc |
23831320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 18141386 - 18141475
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||| ||| |||||| |
|
|
| T |
18141386 |
gaatgatatgtgaacaaccaaatcgtacaaccagcaacttattttctatttttaataatattttacttgatttcgatttatgtactcctc |
18141475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 22995981 - 22996065
Alignment:
| Q |
153 |
tgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
||||||| |||||||||||||||| |||||| ||||| |||||||||||||| ||||||||| |||||||||||| |||||||||| |
|
|
| T |
22995981 |
tgatatgtgaacaaccaaattgtataaccaacaactt--ttgctatttttaataatattttgcctgatttcgatttatgtgctcctc |
22996065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 23792419 - 23792335
Alignment:
| Q |
153 |
tgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
||||||| |||||||||||||||| |||||| ||||| |||||||||||||| ||||||||| |||||||||||| |||||||||| |
|
|
| T |
23792419 |
tgatatgtgaacaaccaaattgtataaccaacaactt--ttgctatttttaataatattttgcctgatttcgatttatgtgctcctc |
23792335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 21203381 - 21203302
Alignment:
| Q |
151 |
aatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttct |
230 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||| |||||| ||| |||||||||| || ||||||||||||| ||||||| |
|
|
| T |
21203381 |
aatgatatgtgaacaaccaaattgtacaatcaacaacttacttgatatttttaataatgttttgcttgattttgatttct |
21203302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 9961272 - 9961216
Alignment:
| Q |
172 |
ttgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgattt |
228 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | || ||||| ||||||||||||| |
|
|
| T |
9961272 |
ttgtacaaccaacaacttatttgctattttttaatattttttgattgatttcgattt |
9961216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 9388564 - 9388653
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
9388564 |
gaatgatatgtgaacaattaaattgtacaaccaacaacttatttactatttttaatgatattttgtctgatttcgatttatgtgctcctc |
9388653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 10366569 - 10366658
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||| | |||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
10366569 |
gaatgatacgtgaacaatcaaattgtacaaccaacaacttatttgttatttttaatgatattttatttgatttcgatttatgtgctcctc |
10366658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 33538179 - 33538268
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||| ||| || |||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||| || |||||| |
|
|
| T |
33538179 |
gaatgatatgtgaaaaatcaaattgtacaaccaacaacttatttactatttttaatgatattttgcatgattttgatttccgtactcctc |
33538268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 33152575 - 33152512
Alignment:
| Q |
176 |
acaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |
|
|
| T |
33152575 |
acaaccaacaacttatttgctatttttaatgatattttgcatgattttgatttccgtgctcctc |
33152512 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 3684735 - 3684824
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||| ||||| ||||||| |||||||| |||||| || ||||||||||||||||| |||||||| |||||||||||| |||||||||| |
|
|
| T |
3684735 |
gaataatatgtgaacaactaaattgtaaaaccaacaatatatttgctatttttaataatattttgtctgatttcgatttttgtgctcctc |
3684824 |
T |
 |
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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 2728259 - 2728314
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaat |
205 |
Q |
| |
|
|||||||||| ||||||| ||||| ||||||||| |||||| |||||||||||||| |
|
|
| T |
2728259 |
gaatgatatgtgaacaactaaattatacaaccaacaacttacttgctatttttaat |
2728314 |
T |
 |
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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 2728602 - 2728634
Alignment:
| Q |
207 |
atattttgcttgatttcgatttctgtgctcctc |
239 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
2728602 |
atattttgcttgatttcgatttatgtgctcctc |
2728634 |
T |
 |
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Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 37819956 - 37819877
Alignment:
| Q |
151 |
aatgatatgcgaacaaccaaattgtacaaccaataacttatttgctatttttaatgatattttgcttgatttcgatttct |
230 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| || ||||||||||| |||||| ||||||| |||||||||||||| |
|
|
| T |
37819956 |
aatgatatttgaacaactaaattgtacaaccaacaatttatttgctatgtttaataatattttatctgatttcgatttct |
37819877 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 24511979 - 24512022
Alignment:
| Q |
150 |
gaatgatatgcgaacaaccaaattgtacaaccaataacttattt |
193 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
24511979 |
gaatgatatctgaacaaccaaattgtacaaccaacaacttattt |
24512022 |
T |
 |
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