View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9974_low_1 (Length: 390)
Name: NF9974_low_1
Description: NF9974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9974_low_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 6 - 390
Target Start/End: Original strand, 35271946 - 35272332
Alignment:
| Q |
6 |
agagaataggttgatcatccaagacatgcaatttgttaaaagttggtcatttgctggaaaagggccacttgtcagagatggcagagtgatatgagggcag |
105 |
Q |
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| T |
35271946 |
agagaataggctgatcatccaagacatgcaatttgttaaaagttggtcatttgctggaaaagggccacttgtcagagatggcagagtgatatgagggcag |
35272045 |
T |
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| Q |
106 |
ctgaatagggttattaaagatcctcattcttcatgcttgttatgcaaagttatgatcattaagaacactcattatggaaagaaatgaaatctctggtctt |
205 |
Q |
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| T |
35272046 |
ctgaatagggttattaaagaccctcattcttcatgcttgttatgcaaagttatgatcattaagaacactcattatggaaagaaatgaaatctctggtctt |
35272145 |
T |
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| Q |
206 |
ttattgtatcttttcatttcttacaatctgaaatcttattaccttttcatttcttaggcgattgact--tatgactactacaaaggccagatggaagctt |
303 |
Q |
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| T |
35272146 |
ttattgtatcttttcatttcttacaatctgaaatcttattaccttttcatttcttaggcgattgacttctatgactactacaaaggccagatggaagctt |
35272245 |
T |
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| Q |
304 |
gggatggacctgccttgcttttattcaggtataaagataaaaacaaatccataggaacacacctgccttgttggtatatcactttat |
390 |
Q |
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| T |
35272246 |
gggatggacctgccttgcttttattcaggtataaagataaaaacaaatccataggaacacacctgccttgttggtatatcactttat |
35272332 |
T |
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