View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9975_low_5 (Length: 220)

Name: NF9975_low_5
Description: NF9975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9975_low_5
NF9975_low_5
[»] chr4 (53 HSPs)
chr4 (24-87)||(38416062-38416125)
chr4 (20-81)||(31352113-31352174)
chr4 (12-65)||(11144680-11144733)
chr4 (32-81)||(42316823-42316872)
chr4 (25-81)||(21052556-21052612)
chr4 (24-87)||(25978323-25978385)
chr4 (13-76)||(46676502-46676565)
chr4 (24-74)||(56551598-56551648)
chr4 (24-65)||(6087752-6087793)
chr4 (13-74)||(7230274-7230335)
chr4 (13-74)||(11949769-11949830)
chr4 (12-77)||(12058312-12058377)
chr4 (32-77)||(19908705-19908750)
chr4 (13-82)||(49473639-49473708)
chr4 (17-65)||(12439662-12439710)
chr4 (13-77)||(24664994-24665058)
chr4 (13-77)||(36478985-36479049)
chr4 (13-65)||(48472955-48473007)
chr4 (25-81)||(53190301-53190357)
chr4 (13-80)||(36203230-36203297)
chr4 (20-79)||(42756107-42756166)
chr4 (22-65)||(43782320-43782363)
chr4 (24-87)||(50442741-50442803)
chr4 (13-80)||(51002281-51002348)
chr4 (24-78)||(470320-470374)
chr4 (13-87)||(7967618-7967692)
chr4 (25-63)||(8027414-8027452)
chr4 (13-63)||(8494981-8495031)
chr4 (12-74)||(16733525-16733587)
chr4 (12-74)||(41520947-41521009)
chr4 (20-62)||(46409499-46409541)
chr4 (23-65)||(49949338-49949380)
chr4 (32-77)||(6520084-6520129)
chr4 (14-63)||(16054554-16054603)
chr4 (13-74)||(20799400-20799461)
chr4 (24-65)||(21317353-21317394)
chr4 (18-63)||(22279537-22279582)
chr4 (14-83)||(23775513-23775582)
chr4 (24-81)||(43027297-43027354)
chr4 (13-62)||(53142600-53142649)
chr4 (24-81)||(56497607-56497664)
chr4 (45-77)||(1701635-1701667)
chr4 (13-65)||(2186348-2186400)
chr4 (24-76)||(6789430-6789482)
chr4 (34-78)||(10006355-10006399)
chr4 (13-65)||(11286796-11286848)
chr4 (13-65)||(13121538-13121590)
chr4 (13-65)||(16740393-16740445)
chr4 (25-81)||(18915045-18915101)
chr4 (25-65)||(34247446-34247486)
chr4 (25-65)||(48643276-48643316)
chr4 (13-65)||(50362154-50362206)
chr4 (13-65)||(52270045-52270097)
[»] chr8 (47 HSPs)
chr8 (14-83)||(9655994-9656063)
chr8 (24-80)||(19778070-19778126)
chr8 (13-63)||(23816784-23816834)
chr8 (20-74)||(42208475-42208529)
chr8 (42-87)||(7839111-7839156)
chr8 (25-77)||(11963406-11963459)
chr8 (13-74)||(13357447-13357508)
chr8 (13-90)||(27750894-27750971)
chr8 (12-81)||(34968548-34968616)
chr8 (20-77)||(44019550-44019607)
chr8 (33-65)||(1200360-1200392)
chr8 (17-65)||(9055420-9055468)
chr8 (24-76)||(13477905-13477957)
chr8 (13-77)||(32192888-32192952)
chr8 (13-65)||(33451364-33451416)
chr8 (13-65)||(37015851-37015903)
chr8 (25-81)||(37938501-37938557)
chr8 (21-77)||(38282842-38282898)
chr8 (32-79)||(7679915-7679962)
chr8 (25-80)||(10320502-10320557)
chr8 (14-65)||(17704008-17704059)
chr8 (24-87)||(30623298-30623361)
chr8 (20-58)||(3889891-3889929)
chr8 (13-83)||(8984491-8984561)
chr8 (13-63)||(13286125-13286175)
chr8 (13-79)||(26695306-26695372)
chr8 (20-65)||(1244720-1244765)
chr8 (32-81)||(4830021-4830070)
chr8 (32-65)||(9019579-9019612)
chr8 (32-81)||(9067095-9067144)
chr8 (24-77)||(9635056-9635109)
chr8 (13-74)||(11708980-11709041)
chr8 (13-74)||(27587215-27587276)
chr8 (20-65)||(31888027-31888072)
chr8 (13-74)||(33743569-33743630)
chr8 (24-65)||(36018545-36018586)
chr8 (16-65)||(37938745-37938794)
chr8 (13-66)||(37999434-37999487)
chr8 (33-74)||(42700519-42700560)
chr8 (45-78)||(44146749-44146782)
chr8 (13-65)||(11621169-11621221)
chr8 (42-74)||(18959172-18959204)
chr8 (45-81)||(21557459-21557495)
chr8 (13-81)||(23852905-23852973)
chr8 (32-80)||(29186515-29186563)
chr8 (13-65)||(39821878-39821930)
chr8 (17-81)||(45396563-45396626)
[»] chr5 (50 HSPs)
chr5 (24-81)||(27679503-27679560)
chr5 (9-81)||(35109390-35109462)
chr5 (25-81)||(11017182-11017238)
chr5 (13-81)||(28207126-28207194)
chr5 (34-77)||(22745904-22745947)
chr5 (20-65)||(11844453-11844498)
chr5 (24-77)||(18391605-18391658)
chr5 (13-74)||(30893927-30893988)
chr5 (12-65)||(36321509-36321562)
chr5 (13-65)||(1808608-1808660)
chr5 (14-74)||(5246162-5246222)
chr5 (20-80)||(11647198-11647258)
chr5 (25-65)||(18538614-18538654)
chr5 (13-77)||(37932324-37932388)
chr5 (10-77)||(20145573-20145640)
chr5 (43-77)||(5107248-5107282)
chr5 (32-62)||(6898034-6898064)
chr5 (12-58)||(13480249-13480295)
chr5 (32-82)||(16752500-16752550)
chr5 (25-79)||(28604419-28604473)
chr5 (24-78)||(31308645-31308699)
chr5 (24-74)||(37614433-37614483)
chr5 (13-65)||(596410-596463)
chr5 (32-81)||(1476109-1476158)
chr5 (34-87)||(3955561-3955614)
chr5 (13-62)||(5846023-5846072)
chr5 (12-65)||(15889404-15889457)
chr5 (24-65)||(16133080-16133121)
chr5 (24-77)||(16485966-16486019)
chr5 (32-81)||(17145347-17145396)
chr5 (24-65)||(19068454-19068495)
chr5 (13-62)||(19248473-19248522)
chr5 (20-77)||(26376967-26377024)
chr5 (13-62)||(31198703-31198752)
chr5 (32-77)||(31545884-31545929)
chr5 (45-82)||(31747119-31747156)
chr5 (32-65)||(34206240-34206273)
chr5 (13-74)||(34987157-34987218)
chr5 (33-77)||(3222745-3222789)
chr5 (13-65)||(6489001-6489053)
chr5 (13-77)||(6624770-6624834)
chr5 (25-65)||(13409434-13409474)
chr5 (25-77)||(13547453-13547505)
chr5 (26-86)||(17242674-17242734)
chr5 (25-65)||(18489091-18489131)
chr5 (32-80)||(19783635-19783683)
chr5 (13-65)||(20370145-20370197)
chr5 (13-65)||(24485693-24485745)
chr5 (45-81)||(32339761-32339797)
chr5 (32-80)||(34702503-34702551)
[»] chr3 (52 HSPs)
chr3 (13-81)||(48315023-48315091)
chr3 (13-81)||(48376829-48376897)
chr3 (32-78)||(10440697-10440743)
chr3 (13-73)||(2105705-2105765)
chr3 (24-87)||(13042793-13042856)
chr3 (24-87)||(13050870-13050933)
chr3 (22-81)||(35492796-35492855)
chr3 (13-87)||(21914064-21914138)
chr3 (13-87)||(45096020-45096094)
chr3 (24-81)||(8113561-8113618)
chr3 (24-77)||(52119381-52119434)
chr3 (13-78)||(53633619-53633684)
chr3 (32-65)||(54584046-54584079)
chr3 (13-65)||(1149084-1149136)
chr3 (1-65)||(2078222-2078286)
chr3 (25-65)||(2662098-2662138)
chr3 (13-65)||(4216414-4216466)
chr3 (13-65)||(16980369-16980421)
chr3 (13-65)||(29631180-29631232)
chr3 (33-81)||(51614223-51614271)
chr3 (24-87)||(35191810-35191873)
chr3 (18-77)||(38869521-38869580)
chr3 (32-79)||(39869808-39869855)
chr3 (24-83)||(47099032-47099091)
chr3 (24-74)||(10926474-10926524)
chr3 (32-78)||(11969652-11969698)
chr3 (43-81)||(14771355-14771393)
chr3 (13-67)||(19745354-19745408)
chr3 (13-79)||(21331418-21331484)
chr3 (24-82)||(21513293-21513351)
chr3 (49-87)||(41990577-41990615)
chr3 (32-74)||(48417873-48417915)
chr3 (19-65)||(50570204-50570250)
chr3 (24-77)||(5702181-5702233)
chr3 (32-77)||(7859495-7859540)
chr3 (32-81)||(15507270-15507319)
chr3 (20-65)||(25441515-25441560)
chr3 (24-77)||(30200831-30200884)
chr3 (20-65)||(31214635-31214680)
chr3 (13-70)||(33223862-33223919)
chr3 (24-81)||(46469282-46469338)
chr3 (24-81)||(53996304-53996361)
chr3 (14-78)||(8139710-8139774)
chr3 (13-65)||(10498710-10498762)
chr3 (14-81)||(12043095-12043163)
chr3 (13-65)||(16792989-16793041)
chr3 (13-65)||(18870740-18870792)
chr3 (32-80)||(19468464-19468512)
chr3 (17-65)||(25902778-25902826)
chr3 (21-65)||(28694003-28694047)
chr3 (13-77)||(44579630-44579694)
chr3 (25-65)||(54230114-54230154)
[»] scaffold0083 (1 HSPs)
scaffold0083 (20-90)||(45944-46014)
[»] chr2 (51 HSPs)
chr2 (13-79)||(40099385-40099450)
chr2 (24-73)||(13000690-13000739)
chr2 (13-74)||(21558812-21558873)
chr2 (32-77)||(37320520-37320565)
chr2 (13-73)||(7206119-7206179)
chr2 (20-63)||(10065474-10065517)
chr2 (25-87)||(12124551-12124613)
chr2 (24-90)||(19179040-19179106)
chr2 (24-74)||(22608532-22608582)
chr2 (20-62)||(38835258-38835300)
chr2 (24-81)||(20120720-20120777)
chr2 (24-77)||(24593381-24593434)
chr2 (13-74)||(30243244-30243305)
chr2 (13-65)||(18782555-18782607)
chr2 (13-81)||(20455885-20455953)
chr2 (13-81)||(22523011-22523079)
chr2 (13-65)||(24592861-24592913)
chr2 (13-65)||(26999104-26999156)
chr2 (45-81)||(41778943-41778979)
chr2 (24-87)||(12124689-12124752)
chr2 (11-81)||(16221345-16221415)
chr2 (13-79)||(22571866-22571932)
chr2 (32-82)||(27935069-27935119)
chr2 (13-83)||(31543006-31543076)
chr2 (24-78)||(36547237-36547291)
chr2 (20-62)||(39088817-39088859)
chr2 (45-87)||(43356535-43356577)
chr2 (24-81)||(10156022-10156079)
chr2 (24-65)||(15654884-15654925)
chr2 (24-65)||(18231488-18231529)
chr2 (24-77)||(24393250-24393303)
chr2 (24-61)||(24520658-24520695)
chr2 (17-74)||(24581023-24581080)
chr2 (20-65)||(25598577-25598622)
chr2 (32-81)||(29809339-29809388)
chr2 (13-74)||(30089043-30089104)
chr2 (13-74)||(30125647-30125708)
chr2 (42-79)||(33401577-33401614)
chr2 (25-74)||(43117196-43117245)
chr2 (13-65)||(9383224-9383276)
chr2 (13-65)||(9686451-9686503)
chr2 (13-65)||(11560492-11560544)
chr2 (33-65)||(12231891-12231923)
chr2 (19-59)||(16385413-16385453)
chr2 (25-65)||(21482534-21482574)
chr2 (13-65)||(26400745-26400797)
chr2 (25-77)||(28771588-28771640)
chr2 (13-65)||(34345370-34345422)
chr2 (13-77)||(34903511-34903575)
chr2 (25-65)||(35685076-35685116)
chr2 (18-78)||(42200686-42200746)
[»] chr1 (56 HSPs)
chr1 (11-81)||(38448865-38448935)
chr1 (13-77)||(30795695-30795759)
chr1 (17-65)||(50263378-50263426)
chr1 (24-79)||(34808564-34808619)
chr1 (16-87)||(51509640-51509711)
chr1 (12-74)||(8269374-8269436)
chr1 (13-79)||(28979277-28979343)
chr1 (20-65)||(10843336-10843381)
chr1 (13-62)||(13779572-13779621)
chr1 (24-77)||(47528450-47528503)
chr1 (32-81)||(47719106-47719155)
chr1 (24-81)||(50638915-50638972)
chr1 (26-82)||(9872103-9872159)
chr1 (29-77)||(17221523-17221571)
chr1 (25-81)||(24124829-24124885)
chr1 (32-80)||(24631852-24631900)
chr1 (13-65)||(27127218-27127270)
chr1 (13-65)||(31061918-31061970)
chr1 (13-81)||(34632163-34632231)
chr1 (13-65)||(52441526-52441578)
chr1 (32-63)||(40618923-40618954)
chr1 (13-80)||(44678017-44678084)
chr1 (19-58)||(52202319-52202358)
chr1 (45-87)||(31401646-31401688)
chr1 (13-74)||(2817379-2817440)
chr1 (20-65)||(3509956-3510001)
chr1 (13-62)||(3935802-3935851)
chr1 (20-65)||(10132459-10132504)
chr1 (42-87)||(10385311-10385356)
chr1 (24-77)||(13054878-13054931)
chr1 (26-87)||(13615605-13615666)
chr1 (24-65)||(13794523-13794564)
chr1 (24-65)||(17283956-17283997)
chr1 (20-65)||(22946565-22946610)
chr1 (25-78)||(23460483-23460535)
chr1 (13-62)||(26803469-26803518)
chr1 (16-77)||(29251751-29251812)
chr1 (24-65)||(35473957-35473998)
chr1 (22-59)||(35805318-35805355)
chr1 (24-65)||(39387806-39387847)
chr1 (13-74)||(41763161-41763222)
chr1 (25-82)||(47961287-47961344)
chr1 (19-83)||(12500924-12500987)
chr1 (13-65)||(21400038-21400090)
chr1 (13-81)||(23405357-23405425)
chr1 (13-65)||(26705594-26705646)
chr1 (32-84)||(28679695-28679747)
chr1 (17-65)||(30548106-30548154)
chr1 (25-65)||(30561729-30561769)
chr1 (13-65)||(31092655-31092707)
chr1 (32-76)||(32826709-32826753)
chr1 (13-65)||(36371055-36371107)
chr1 (35-79)||(40613039-40613083)
chr1 (13-65)||(42045387-42045439)
chr1 (33-65)||(45418078-45418110)
chr1 (13-65)||(47417777-47417829)
[»] chr7 (34 HSPs)
chr7 (20-81)||(2962725-2962786)
chr7 (20-65)||(7872763-7872808)
chr7 (24-77)||(21105608-21105661)
chr7 (24-81)||(41029277-41029334)
chr7 (32-81)||(45425466-45425515)
chr7 (24-77)||(46987091-46987144)
chr7 (17-77)||(3337272-3337332)
chr7 (32-79)||(2618692-2618739)
chr7 (13-80)||(5584641-5584708)
chr7 (13-80)||(5589601-5589668)
chr7 (22-65)||(34568348-34568391)
chr7 (34-81)||(38858171-38858218)
chr7 (14-88)||(3532576-3532650)
chr7 (32-70)||(3584217-3584255)
chr7 (24-70)||(8615028-8615074)
chr7 (13-63)||(8683064-8683114)
chr7 (24-74)||(18714453-18714503)
chr7 (20-74)||(39280824-39280878)
chr7 (20-86)||(41425223-41425289)
chr7 (13-79)||(42336064-42336130)
chr7 (32-81)||(1046569-1046618)
chr7 (13-74)||(10244721-10244782)
chr7 (24-65)||(21050237-21050278)
chr7 (24-77)||(23069860-23069913)
chr7 (24-77)||(24991786-24991839)
chr7 (13-65)||(3830062-3830114)
chr7 (20-76)||(10362308-10362364)
chr7 (13-65)||(22690051-22690103)
chr7 (13-77)||(24225984-24226048)
chr7 (13-65)||(30006107-30006159)
chr7 (25-65)||(30463964-30464004)
chr7 (13-73)||(34773225-34773285)
chr7 (14-70)||(41527555-41527611)
chr7 (13-65)||(47342671-47342723)
[»] chr6 (27 HSPs)
chr6 (13-81)||(21847188-21847256)
chr6 (25-81)||(32193858-32193914)
chr6 (24-79)||(4450267-4450322)
chr6 (22-65)||(19554156-19554199)
chr6 (12-87)||(23629830-23629905)
chr6 (14-65)||(32409193-32409244)
chr6 (25-87)||(35110060-35110122)
chr6 (32-77)||(1918461-1918506)
chr6 (13-66)||(30370164-30370217)
chr6 (13-73)||(4922415-4922475)
chr6 (13-65)||(8810634-8810686)
chr6 (32-87)||(404176-404231)
chr6 (24-87)||(17829301-17829364)
chr6 (13-83)||(8217377-8217447)
chr6 (25-79)||(30639427-30639481)
chr6 (32-74)||(31971542-31971584)
chr6 (24-65)||(334145-334186)
chr6 (24-77)||(655752-655805)
chr6 (13-74)||(32053782-32053843)
chr6 (13-65)||(331901-331953)
chr6 (13-65)||(788860-788912)
chr6 (13-77)||(2726420-2726484)
chr6 (13-65)||(7081669-7081721)
chr6 (13-65)||(12412271-12412323)
chr6 (13-77)||(15291693-15291757)
chr6 (13-65)||(17151230-17151282)
chr6 (13-65)||(18256877-18256929)
[»] scaffold0026 (1 HSPs)
scaffold0026 (27-81)||(75333-75387)
[»] scaffold0896 (1 HSPs)
scaffold0896 (13-65)||(3135-3187)
[»] scaffold0154 (1 HSPs)
scaffold0154 (24-81)||(37540-37597)
[»] scaffold0070 (1 HSPs)
scaffold0070 (43-87)||(42925-42969)
[»] scaffold0040 (2 HSPs)
scaffold0040 (25-81)||(53776-53832)
scaffold0040 (13-73)||(58847-58907)
[»] scaffold0007 (1 HSPs)
scaffold0007 (13-65)||(1565-1617)


Alignment Details
Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 38416062 - 38416125
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  38416062 cttagctcagttggtaaggataatgcataatatatgcaaggtatgaggttcgaatcccaaacac 38416125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 31352113 - 31352174
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||||||||||||||  || ||||||||| |||||||||||||||||||||||||||    
T  31352113 tgaacttagctaagttggtatggacaatgcataaaatatgcaaggtacgaggttcgaatccc 31352174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 11144733 - 11144680
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||||||||| || ||||| |||||| |||||||||||||||||||||    
T  11144733 cgtcctcatgaacttacctcagttgataaagacaatgcataatatatgcaaggt 11144680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 42316872 - 42316823
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  42316872 agttggtaaagacagtgcataatatatgcaaggtccgaggttcgaatccc 42316823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 21052612 - 21052556
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||||||  |||||| |||||||||||||||||| ||||||||||||||    
T  21052612 ttagctcagttggtatggataatacataatatatgcaaggtatgaggttcgaatccc 21052556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 25978323 - 25978385
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||| ||| || ||||||||||||||||||||| |||||||||||||||| ||||    
T  25978323 cttagctcagttg-taaggacaatgcataatatatgcaaggtccgaggttcgaatcccagacac 25978385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 46676565 - 46676502
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcga 76  Q
    |||| ||||| ||||||| ||||||||| || ||||||||||||||||||||| || |||||||    
T  46676565 gtccccatgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcga 46676502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 56551648 - 56551598
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| ||||||||| || ||||||||||||||||||||| ||||||||    
T  56551648 cttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttc 56551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 6087752 - 6087793
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  6087752 cttagctcagttggtatagataatgcataatatatgcaaggt 6087793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 7230274 - 7230335
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| ||||||| ||||||||| || ||||||||||||||||||||| || |||||    
T  7230274 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttc 7230335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11949830 - 11949769
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||||||| ||||||| ||||||||  || ||||||||||||||||||||| || |||||    
T  11949830 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 11949769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 12058312 - 12058377
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||| |||||  |||||| ||| ||||| |||||||||||||||||||||||| | |||||||||    
T  12058312 cgtccccatgagtttagctcagtcggtaaggataatgcataatatatgcaaggttcaaggttcgaa 12058377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 19908705 - 19908750
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||    
T  19908705 agttggtaaggacaatgcataatatatgcaaggtccgaggttcgaa 19908750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 49473639 - 49473708
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccca 82  Q
    |||||| ||| ||||||  ||||||||| || ||||||||||||||||||||| || |||||||| ||||    
T  49473639 gtcctcgtgagcttagcccagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacccca 49473708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 12439662 - 12439710
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||||||| ||||| ||| || |||||||||||||||||||||    
T  12439662 tcatgaacttagctcagttgataaggacaatgcataatatatgcaaggt 12439710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 24665058 - 24664994
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||| ||||||| ||||||||  || ||||||||||||||||||||| || ||||||||    
T  24665058 gtcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaa 24664994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 36478985 - 36479049
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||||||| |||||||  |||||||  || ||||||||||||||| ||||| |||||||||||    
T  36478985 gtcctcatgagcttagctctgttggtatggacaatgcataatatatgtaaggttcgaggttcgaa 36479049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 48472955 - 48473007
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||||||| || ||||| ||||||||||||||||||| ||||||||    
T  48472955 gtcctcgtgaacttaactcagttgataaagataatgcataatatttgcaaggt 48473007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 53190301 - 53190357
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||||||  |||||||||||||||||||||||| |  ||||||||||||    
T  53190301 ttagctcagttggtatggataatgcataatatatgcaaggtccagggttcgaatccc 53190357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 36203230 - 36203297
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    |||||| ||| ||||||| ||||| ||| || ||||||||||||||||||||| |||| || ||||||    
T  36203230 gtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaaggtccgagatttgaatcc 36203297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 42756166 - 42756107
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    ||||||||||| ||||| ||| || ||||||||||||||||||||| || | ||||||||    
T  42756166 tgaacttagctcagttgataaggacaatgcataatatatgcaaggttcgggattcgaatc 42756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 43782363 - 43782320
Alignment:
Q  22 aacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||| ||||||||| || |||||||||||||||||||||    
T  43782363 aacttagctcagttggtaatgacaatgcataatatatgcaaggt 43782320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 50442803 - 50442741
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||||||  |||||||||||||||||||||||| |  ||||||||||||| ||||    
T  50442803 cttagctcagttggtagggataatgcataatatatgcaaggt-ctgggttcgaatcccagacac 50442741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 51002281 - 51002348
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    |||||| ||| |||| || |||||||| ||| ||||||||| |||||||||||  |||||||||||||    
T  51002281 gtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaaggtttgaggttcgaatcc 51002348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 470374 - 470320
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    ||||||| ||||| ||||||||||| |||||||||| || ||| |||||||||||    
T  470374 cttagctcagttgataaagataatgtataatatatgtaaagtatgaggttcgaat 470320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 7967692 - 7967618
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    |||||| ||| |||| || |||| |||||||||||||||||||||||||| ||  | | ||||||||||| ||||    
T  7967692 gtcctcgtgagcttaacttagttcgtaaagataatgcataatatatgcaaagtctgggattcgaatcccagacac 7967618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 8027452 - 8027414
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  8027452 ttagctcagttggtaaggataatgcataatatatgcaag 8027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 8494981 - 8495031
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    |||||| ||||||||||| ||||||||  || |||||||||||||||||||    
T  8494981 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaag 8495031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 16733587 - 16733525
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| ||| |||| || ||||| ||||||||||| |||||||||||||| | ||||||||    
T  16733587 cgtcctcgtgagcttaactcagttgataaagataatgtataatatatgcaagatccgaggttc 16733525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 41520947 - 41521009
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||||| | |||| || |||||||| ||| ||||||||||||||||||||| | ||||||    
T  41520947 cgtcctcataagcttaactcagttggtagagacaatgcataatatatgcaaggttcaaggttc 41521009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 46409541 - 46409499
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||||| || |||||||||||| ||||||||||||||||||    
T  46409541 tgaacttaactcagttggtaaagacaatgcataatatatgcaa 46409499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 49949338 - 49949380
Alignment:
Q  23 acttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||| ||||||||| || |||||||||||||||||||||    
T  49949338 acttagctcagttggtaaggacaatgcataatatatgcaaggt 49949380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 6520084 - 6520129
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||| ||||||| |||||||||||||||||||||  ||||||||||    
T  6520084 agttagtaaagacaatgcataatatatgcaaggtttgaggttcgaa 6520129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 16054603 - 16054554
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    ||||| ||| ||||||| ||||| || |||||||||||||||||||||||    
T  16054603 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 16054554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 20799461 - 20799400
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| ||||||| ||||||||  || ||||||||||||||||||||| || |||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttc 20799400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 21317394 - 21317353
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| |||||||| ||| |||||||||||||||||||||    
T  21317394 cttagctcagttggtagagacaatgcataatatatgcaaggt 21317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22279582 - 22279537
Alignment:
Q  18 catgaacttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    ||||| ||||||| ||||||||| || |||||||||||||||||||    
T  22279582 catgagcttagctcagttggtaaggacaatgcataatatatgcaag 22279537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 23775513 - 23775582
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaa 83  Q
    ||||||||| ||||||  ||||||||  || ||||||||||||||||||||| |  |||||||| |||||    
T  23775513 tcctcatgagcttagcacagttggtagggacaatgcataatatatgcaaggtccagggttcgaaccccaa 23775582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 43027297 - 43027354
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| | ||||||  |||||||||||||||||||||||| |  ||||||||||||    
T  43027297 cttagctcaattggtagtgataatgcataatatatgcaaggttcatggttcgaatccc 43027354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 53142600 - 53142649
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||||||| ||||| | ||||| || ||||||||||||||||||||||    
T  53142600 gtcctcatgagcttagttcagttgctatagataatgcataatatatgcaa 53142649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 56497664 - 56497607
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| | ||||||| || |||||||||||||||||||||  | ||||||||||||    
T  56497664 cttagctcaattggtaaggacaatgcataatatatgcaaggtctggggttcgaatccc 56497607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 1701635 - 1701667
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||||||||||||||| |||||||||||    
T  1701635 aatgcataatatatgcaaggtccgaggttcgaa 1701667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 2186400 - 2186348
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  2186400 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 2186348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 6789482 - 6789430
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcga 76  Q
    ||||||| ||||||||| || |||||||| |||||||||||| || |||||||    
T  6789482 cttagctcagttggtaaggacaatgcatagtatatgcaaggtccggggttcga 6789430  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 10006355 - 10006399
Alignment:
Q  34 ttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    |||||||||| |||||||||||||||||||||  | |||||||||    
T  10006355 ttggtaaagacaatgcataatatatgcaaggtctggggttcgaat 10006399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 11286848 - 11286796
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||| | |||||||| ||| |||||||||||||||||||||    
T  11286848 gtcctcctgagcttagttcagttggtagagacaatgcataatatatgcaaggt 11286796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 13121538 - 13121590
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  13121538 gtcctcgtgagcttagcttagttggtagggacaatgcataatatatgcaaggt 13121590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 16740393 - 16740445
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| |||||||  ||| ||||||||| |||||||||||    
T  16740393 gtcctcgtgaacttagcttagttggttgagacaatgcataaaatatgcaaggt 16740445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 18915101 - 18915045
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||||||| || |||||||||||||| || ||| || ||||||||||||    
T  18915101 ttagctcagttggtaaggacaatgcataatatattcatggtccggggttcgaatccc 18915045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 34247446 - 34247486
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||| || |||||||||||||||||||||    
T  34247446 ttagctcagttggtaaggacaatgcataatatatgcaaggt 34247486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 48643316 - 48643276
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||||||| ||||||||||||||||||| |||||    
T  48643316 ttagcttagttggtagagataatgcataatatatgtaaggt 48643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 50362206 - 50362154
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  50362206 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 50362154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 52270097 - 52270045
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  52270097 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 52270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 9656063 - 9655994
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaa 83  Q
    ||||||||| ||||||| ||||||||| || ||||||||| ||||||||||| ||||||||||| |||||    
T  9656063 tcctcatgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtccgaggttcgaaccccaa 9655994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 19778070 - 19778126
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    ||||||| ||||||||| || ||||||||||||||||||||| || |||||||||||    
T  19778070 cttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatcc 19778126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 23816784 - 23816834
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    |||||| ||| ||||||| ||||||||| ||||||||||||||||||||||    
T  23816784 gtcctcgtgagcttagctcagttggtaaggataatgcataatatatgcaag 23816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 42208529 - 42208475
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||| |||||| ||||||||| || ||||||||||||||||||||| ||||||||    
T  42208529 tgaatttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttc 42208475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 7839156 - 7839111
Alignment:
Q  42 gataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||    
T  7839156 gataatgcataatatatgcaaggtatggggttcgaatcccgaacac 7839111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 11963459 - 11963406
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtac-gaggttcgaa 77  Q
    ||||||||||||||||||| |||||||| |||||||||||| | ||||||||||    
T  11963459 ttagctaagttggtaaagacaatgcatagtatatgcaaggttctgaggttcgaa 11963406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13357508 - 13357447
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| |||| || ||||||||  || ||||||||||||||||||||||||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggttc 13357447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 27750971 - 27750894
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacactac 90  Q
    |||||| ||| ||||||| ||||||||| || | ||||||||||||||||||| || |||||||| | | ||||||||    
T  27750971 gtcctcgtgagcttagctcagttggtaaggacagtgcataatatatgcaaggtccggggttcgaacctcgaacactac 27750894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 34968548 - 34968616
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||| ||||| ||||||||  ||||||||||||||||||||| || || ||||||||||||    
T  34968548 cgtcctcgtgaacctagctcagttggtatggataatgcataatatatgcaaagt-cggggttcgaatccc 34968616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 44019550 - 44019607
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||| ||| |||||||    
T  44019550 tgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccgaagttcgaa 44019607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 1200392 - 1200360
Alignment:
Q  33 gttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||||||||||||||||||||||||||    
T  1200392 gttggtaaagataatgcataatatatgcaaggt 1200360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 9055468 - 9055420
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||||||| ||||| |||| |||||| ||||||||||||||||    
T  9055468 tcatgaacttagctcagttgataaaaataatgtataatatatgcaaggt 9055420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 13477905 - 13477957
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcga 76  Q
    ||||||| ||||||||| || |||||||||||||||||| || ||||||||||    
T  13477905 cttagctgagttggtaaggacaatgcataatatatgcaatgttcgaggttcga 13477957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 32192888 - 32192952
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| || |||||||| ||||||||  || ||||||||||||||||||||| || ||||||||    
T  32192888 gtcctcgtggacttagcttagttggtatggacaatgcataatatatgcaaggttcggggttcgaa 32192952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 33451416 - 33451364
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  ||||||||||||||||||||||||    
T  33451416 gtcctcgtgagcttagctcagttggtatggataatgcataatatatgcaaggt 33451364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 37015903 - 37015851
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| |||||||| ||| |||||||||||||||||||||    
T  37015903 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggt 37015851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 37938501 - 37938557
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||||||  ||||||||||||||||||||| || |||||||| ||||||    
T  37938501 ttagctcagttggtatggataatgcataatatatgcaaagtccgaggttcaaatccc 37938557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 38282898 - 38282842
Alignment:
Q  21 gaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||||||| ||||||||| || |||||||| ||||| |||||| |||||||||||    
T  38282898 gaacttagctcagttggtaaggacaatgcatagtatatacaaggtccgaggttcgaa 38282842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 7679915 - 7679962
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| ||||| ||||||||||||||||||||| || ||||||||||    
T  7679915 agttggcaaagacaatgcataatatatgcaaggttcggggttcgaatc 7679962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 10320502 - 10320557
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    |||||| ||||| |||  ||||||||||||||||| |||||| |||||||||||||    
T  10320502 ttagctcagttgataagaataatgcataatatatgtaaggtatgaggttcgaatcc 10320557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 17704008 - 17704059
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||| ||| ||||||| ||||||||| || |||||||||||||||||||||    
T  17704008 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 17704059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 30623298 - 30623361
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||||||| || |||||||||||||||||||||  | |||||||| ||| |||||    
T  30623298 cttagctcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccccgaacac 30623361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 3889891 - 3889929
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatat 58  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  3889891 tgaacttagcttagttggtaaagacaatgcataatatat 3889929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 8984561 - 8984491
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaa 83  Q
    |||| ||||| |||| || ||||||||  ||||||| ||||||||||||||||  || |||||||||||||    
T  8984561 gtccccatgagcttaactcagttggtatggataatgtataatatatgcaaggtttgatgttcgaatcccaa 8984491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 13286125 - 13286175
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    |||||| ||| ||||||| |||||||| ||| |||||||||||||||||||    
T  13286125 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 13286175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 26695372 - 26695306
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||| ||||||||||||| | ||| ||| |||||| ||||||||||||||||| ||| |||| ||||    
T  26695372 gtccccatgaacttagctcaattgttaaggataatacataatatatgcaaggttcgaagttctaatc 26695306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 1244765 - 1244720
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||||||| || |||||||||||||| ||||||    
T  1244765 tgaacttagctcagttggtaaggacaatgcataatatatacaaggt 1244720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 4830021 - 4830070
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||  || ||||||||||||||||||||| || ||||||||||||    
T  4830021 agttggtatggacaatgcataatatatgcaaggttcggggttcgaatccc 4830070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 9019612 - 9019579
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||||| |||||||||||||||||||||    
T  9019612 agttggtaaagacaatgcataatatatgcaaggt 9019579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 9067095 - 9067144
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||| ||||||||||||| |||||||| |  ||||||||||||||    
T  9067095 agttggtaaggataatgcataatttatgcaagatctgaggttcgaatccc 9067144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 9635109 - 9635056
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| |||| |||| |||||||||||||| ||||||||| || ||||||||    
T  9635109 cttagctcagtttgtaaggataatgcataatacatgcaaggttcggggttcgaa 9635056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 11708980 - 11709041
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| ||||||| ||||||||  || ||||||||||||||||||||| ||| ||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttc 11709041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27587215 - 27587276
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| ||||||| ||||||||| || ||||||| ||||||||||||| || |||||    
T  27587215 gtcctcgtgagcttagctcagttggtaaggacaatgcatgatatatgcaaggtccggggttc 27587276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 31888027 - 31888072
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||||||| || |||| ||||||||||||||||    
T  31888027 tgaacttagctcagttggtaaggacaatggataatatatgcaaggt 31888072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 33743569 - 33743630
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||||| ||||| ||||||| | || ||||||||| ||||||||||| ||||||||    
T  33743569 gtcctcgtgaacatagctcagttggtgaggacaatgcataaaatatgcaaggtccgaggttc 33743630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 36018586 - 36018545
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| |||||||| ||| |||||||||||||||||||||    
T  36018586 cttagcttagttggtagagacaatgcataatatatgcaaggt 36018545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 37938794 - 37938745
Alignment:
Q  16 ctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||||| || |||||  ||||||||||||||||||||||||    
T  37938794 ctcatgagcttagctcagctggtatggataatgcataatatatgcaaggt 37938745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 37999487 - 37999434
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggta 66  Q
    |||||| ||| |||| || ||||||||  |||||||||||||||||||||||||    
T  37999487 gtcctcgtgagcttaactcagttggtatggataatgcataatatatgcaaggta 37999434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 42700519 - 42700560
Alignment:
Q  33 gttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| ||| |||||||||||||||||||||| |||||||    
T  42700519 gttggtagagacaatgcataatatatgcaaggtatgaggttc 42700560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 44146749 - 44146782
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaat 78  Q
    ||||||||||||||||||||| ||||||||||||    
T  44146749 aatgcataatatatgcaaggttcgaggttcgaat 44146782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 11621169 - 11621221
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||| |||||||||| ||| ||| |||||||||||||||||    
T  11621169 gtcctcgtgagcttagttaagttggtagagaaaatacataatatatgcaaggt 11621221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 18959172 - 18959204
Alignment:
Q  42 gataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||||||||||||||||||||| ||||||||    
T  18959172 gataatgcataatatatgcaaggttcgaggttc 18959204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 21557459 - 21557495
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21557459 aatgcataatatatgtaaggtccgaggttcgaatccc 21557495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 23852905 - 23852973
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| ||| ||||  || ||||||||||||||||||||| || |||| |||||||    
T  23852905 gtcctcgtgagcttagctcagtcggtatggacaatgcataatatatgcaaggtccgtggtttgaatccc 23852973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 29186515 - 29186563
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    ||||||||| || ||||| |||||||||||||||| ||||||| |||||    
T  29186515 agttggtaaggacaatgcgtaatatatgcaaggtatgaggttcaaatcc 29186563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 39821878 - 39821930
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  39821878 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 39821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 45396563 - 45396626
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||| ||||||||||  || |||||||||||||||||||||  || |||||||||||    
T  45396563 tcatgagcttagttaagttggtag-gacaatgcataatatatgcaaggtctgaagttcgaatccc 45396626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 27679503 - 27679560
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  27679503 cttagctcagttggtaaagataatgcataatatatgcaaggttcggggttcaaatccc 27679560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 35109390 - 35109462
Alignment:
Q  9 gaacgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||||| | ||| |||| || |||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  35109390 gaacgtccacgtgagcttaactcagttggtaaagacaatacataatatatgcaaggtccgaggttcgaatccc 35109462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 11017182 - 11017238
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||||||  ||||||||||||||||||||||||  ||||||||||||||    
T  11017182 ttagctcagttggtagggataatgcataatatatgcaaggtctgaggttcgaatccc 11017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 28207126 - 28207194
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| ||||||||  || ||||||||| ||||||||||| |||||||||||||||    
T  28207126 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccgaggttcgaatccc 28207194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 22745904 - 22745947
Alignment:
Q  34 ttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  22745904 ttggtaaggataatgcataatatatgtaaggtacgaggttcgaa 22745947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 11844498 - 11844453
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||    
T  11844498 tgaacttagctcagttggtaaggacaatgcataatatatgcaaggt 11844453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 18391605 - 18391658
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||| || ||||||||| ||||||||||| |||||||||||    
T  18391605 cttagctcagttggtaaggacaatgcataaaatatgcaaggtccgaggttcgaa 18391658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 30893927 - 30893988
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| |||| || |||| ||||||| |||||||||||||||||||||| |||||||    
T  30893927 gtcctcgtgagcttaactcagtttgtaaagacaatgcataatatatgcaaggtatgaggttc 30893988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 36321562 - 36321509
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||| ||||||| ||||||||| || |||||||||||||||||||||    
T  36321562 cgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 36321509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 1808660 - 1808608
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| ||||||||  |||||||||||| |||||||||||    
T  1808660 gtcctcgtgaacttagctcagttggtatggataatgcataaaatatgcaaggt 1808608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 5246222 - 5246162
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| |||||| || | |||||| ||| ||||||||||||||||||||| ||||||||    
T  5246222 tcctcataaacttaactcaattggtatagacaatgcataatatatgcaaggttcgaggttc 5246162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 11647198 - 11647258
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    |||||||| || ||||||||| || |||||||||||||||||||||  | |||||||||||    
T  11647198 tgaacttaactcagttggtaaggacaatgcataatatatgcaaggtttggggttcgaatcc 11647258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 18538614 - 18538654
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  18538614 ttagctaagttggtagagacaatgcataatatatgcaaggt 18538654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 37932324 - 37932388
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||| ||||||| ||||||||  || ||||||||||||||||||||| || ||||||||    
T  37932324 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaa 37932388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 20145640 - 20145573
Alignment:
Q  10 aacgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||||||| ||||||||  |||| |||||||| |||||||||  || ||||||||    
T  20145640 aacgtccccatgaacttagcttagttggtagggatattgcataatttatgcaagggccggggttcgaa 20145573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 5107282 - 5107248
Alignment:
Q  43 ataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||||||||||||||||| |||||||||||    
T  5107282 ataatgcataatatatgcaaggtccgaggttcgaa 5107248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 6898034 - 6898064
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaa 62  Q
    |||||||||||||||||||||||||||||||    
T  6898034 agttggtaaagataatgcataatatatgcaa 6898064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 13480249 - 13480295
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatat 58  Q
    ||||| ||||||||||||| ||||||||| |||| ||||||||||||    
T  13480249 cgtccccatgaacttagctcagttggtaaggatattgcataatatat 13480295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 16752550 - 16752500
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccca 82  Q
    ||||||||| || ||||||||||||||||||| | || |||||||||||||    
T  16752550 agttggtaaggacaatgcataatatatgcaagattcggggttcgaatccca 16752500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 28604473 - 28604419
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| |||||||||||| ||||||||||| ||| ||||| || ||||||||||    
T  28604473 ttagctcagttggtaaagacaatgcataataaatgtaaggtccggggttcgaatc 28604419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 31308699 - 31308645
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    ||||||| |||||||||||| |||  ||||||||||||||||  |||||||||||    
T  31308699 cttagctcagttggtaaagacaatatataatatatgcaaggttagaggttcgaat 31308645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 37614483 - 37614433
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| |||||||| ||| || |||||||||||||||||| ||||||||    
T  37614483 cttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttc 37614433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 596410 - 596463
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaag-ataatgcataatatatgcaaggt 65  Q
    |||||| |||||||||||  |||||||||| | |||||||||||||||||||||    
T  596410 gtcctcgtgaacttagctcggttggtaaagcacaatgcataatatatgcaaggt 596463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 1476158 - 1476109
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||||||| ||||| ||||||||||||||||| |  ||||||||||||    
T  1476158 agttggtaaaaataattcataatatatgcaaggttcagggttcgaatccc 1476109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 3955561 - 3955614
Alignment:
Q  34 ttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    |||||||||| ||||||||||||||| || || || ||||||||||||| ||||    
T  3955561 ttggtaaagacaatgcataatatatgtaatgttcggggttcgaatcccagacac 3955614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 5846023 - 5846072
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    ||||| || ||||||||| ||||||||| || ||||||||||||||||||    
T  5846023 gtccttataaacttagctcagttggtaaggacaatgcataatatatgcaa 5846072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 15889404 - 15889457
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  15889404 cgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 15889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 16133121 - 16133080
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||||||| || |||||||||||||||||||||    
T  16133121 cttagctcagttggtaaggacaatgcataatatatgcaaggt 16133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 16486019 - 16485966
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||| |||||| |||||||| ||| ||||||||||||||||| | |||||||||    
T  16486019 cttaactaagtcggtaaagacaatacataatatatgcaaggtccaaggttcgaa 16485966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 17145396 - 17145347
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||||||||| |||| |||||||||||||| |  ||||||||||||||    
T  17145396 agttggtaaagacaatgtataatatatgcaagatctgaggttcgaatccc 17145347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 19068495 - 19068454
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||||||  ||||||||||||||||||||||||    
T  19068495 cttagctcagttggtatggataatgcataatatatgcaaggt 19068454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 19248473 - 19248522
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||| ||| ||||||| |||||||| ||| ||||||||||||||||||    
T  19248473 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaa 19248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 26376967 - 26377024
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||||| ||||||||| || |||||||| ||||||||| || || ||||||||    
T  26376967 tgaacttagctcagttggtaaggacaatgcatattatatgcaacgtccggggttcgaa 26377024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 31198703 - 31198752
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||| ||| |||| || ||||||||| |||||||||||||||||||||    
T  31198703 gtcctcgtgatcttaactcagttggtaaggataatgcataatatatgcaa 31198752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 31545884 - 31545929
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| | |||||||||||||||||||||||| | |||||||||    
T  31545884 agttggttaggataatgcataatatatgcaaggttcaaggttcgaa 31545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 31747156 - 31747119
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaatccca 82  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  31747156 aatgcataatatatgaaaggtacgaggttcaaatccca 31747119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 34206240 - 34206273
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||||| |||||||||||||||||||||    
T  34206240 agttggtaaagacaatgcataatatatgcaaggt 34206273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 34987218 - 34987157
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||||||||||| |||||||   ||||||||||||||||| |||||| || |||||    
T  34987218 gtcctcgtgaacttagctcagttggtgtggataatgcataatatatccaaggttcggggttc 34987157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 3222745 - 3222789
Alignment:
Q  33 gttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||    
T  3222745 gttggtaaagacaatacataatatatgcaaggtctgaggttcgaa 3222789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 6489001 - 6489053
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 6489053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 6624770 - 6624834
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||| ||||||| |||||| |  || ||||||||||||||||||||| || ||||||||    
T  6624770 gtcctcgtgagcttagctcagttggcatggacaatgcataatatatgcaaggtccggggttcgaa 6624834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 13409434 - 13409474
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  13409434 ttagctcagttagtaaagacaatgcataatatatgcaaggt 13409474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 13547453 - 13547505
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| | ||||||| ||||||||||||| |||| ||||| |||||||||||    
T  13547453 ttagctcaattggtaaggataatgcataatgtatgtaaggttcgaggttcgaa 13547505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 17242734 - 17242674
Alignment:
Q  26 tagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaaca 86  Q
    ||||| |||||| || ||||||||||| |||||||||||| || |||||||| ||| ||||    
T  17242734 tagctcagttggcaaggataatgcatagtatatgcaaggtccgcggttcgaaccccgaaca 17242674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 18489131 - 18489091
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||||||| ||| |||||||||||||||||||||    
T  18489131 ttagctcagttggtatagacaatgcataatatatgcaaggt 18489091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 19783683 - 19783635
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    ||||| |||||| ||| ||||||||||||||||| ||| ||||||||||    
T  19783683 agttgataaagacaatacataatatatgcaaggtccgatgttcgaatcc 19783635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 20370197 - 20370145
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  ||||||||||||||||| ||||||    
T  20370197 gtcctcgtgagcttagctcagttggtagggataatgcataatatatacaaggt 20370145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 24485693 - 24485745
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  24485693 gtcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaaggt 24485745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 32339761 - 32339797
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||||||||||||||| || ||||||||||||    
T  32339761 aatgcataatatatgcaaggtccggggttcgaatccc 32339797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 34702503 - 34702551
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    ||||||||| || ||||||||||||||| ||||| || |||||||||||    
T  34702503 agttggtaaggacaatgcataatatatgaaaggtccggggttcgaatcc 34702551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 48315091 - 48315023
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| ||||||||| |||||||||||||||||||||||| || ||||| ||||||    
T  48315091 gtcctcgtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttcaaatccc 48315023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 48376829 - 48376897
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||| |||||  | ||||||||||||    
T  48376829 gtcctcgtgagcttagctcagttggtaaagataatgcataatatatgtaaggtttggggttcgaatccc 48376897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 10440697 - 10440743
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  10440697 agttggtagagacaatgcataatatatgcaaggtacgaggttcgaat 10440743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 2105765 - 2105705
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggtt 73  Q
    |||||| |||||||| || |||||||||| |||||| |||||||||||||||| |||||||    
T  2105765 gtcctcgtgaacttaactcagttggtaaaaataatgtataatatatgcaaggtccgaggtt 2105705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 13042856 - 13042793
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| |||||||||||| |||  |||||||||||||||| || |||||||| |||||||||    
T  13042856 cttagctcagttggtaaagacaatttataatatatgcaaggtccggggttcgaaccccaaacac 13042793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 13050933 - 13050870
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| |||||||||||| |||  |||||||||||||||| || |||||||| |||||||||    
T  13050933 cttagctcagttggtaaagacaatttataatatatgcaaggtccggggttcgaaccccaaacac 13050870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 35492796 - 35492855
Alignment:
Q  22 aacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||| |||||||||  | |||||||||||||||||| || |||||||||||||||    
T  35492796 aacttagctcagttggtaagaacaatgcataatatatgcaaagttcgaggttcgaatccc 35492855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 21914138 - 21914064
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    |||| ||||| |||| || ||||||||| || |||||||||||||||||||||| | |||||||| ||| |||||    
T  21914138 gtccccatgagcttaactcagttggtaaggacaatgcataatatatgcaaggtatggggttcgaacccctaacac 21914064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 45096020 - 45096094
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    |||| ||||||||||||| ||||| ||| || |||||||||||||||||||||  | |||||||| |||| ||||    
T  45096020 gtccccatgaacttagctcagttgataaggacaatgcataatatatgcaaggtctgtggttcgaaccccagacac 45096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 8113618 - 8113561
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||||||| || ||||||||||||||||||| | || ||||||||||||    
T  8113618 cttagctcagttggtaaggacaatgcataatatatgcaagatccgcggttcgaatccc 8113561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 52119381 - 52119434
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||| || ||||||||||||||||||||| || ||||||||    
T  52119381 cttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcgaa 52119434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 53633684 - 53633619
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    |||||| ||| |||| || ||||||||| |||||||||||||||||| ||||| || |||||||||    
T  53633684 gtcctcgtgagcttaactcagttggtaaggataatgcataatatatgtaaggtccggggttcgaat 53633619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 54584046 - 54584079
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||||||||||||||||||||||||||    
T  54584046 agttggtaaagataatgcataatatatgcaaggt 54584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 1149136 - 1149084
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||| || |||||||||||||||||||||    
T  1149136 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 1149084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2078222 - 2078286
Alignment:
Q  1 aaccatttgaacgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||| |||||| || ||| |||||||| || |||||||| ||| |||||||||||||||||||||    
T  2078222 aaccgtttgaaagttctcgtgaacttaactcagttggtagagacaatgcataatatatgcaaggt 2078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 2662098 - 2662138
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  2662098 ttagctcagttggtaaagacaatgcataatatatgcaaggt 2662138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 4216466 - 4216414
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| ||||| ||| || |||||||||||||||||||||    
T  4216466 gtcctcgtgaacttagctcagttgataaggacaatgcataatatatgcaaggt 4216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 16980421 - 16980369
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||| || |||||||||||||||||||||    
T  16980421 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 16980369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 29631180 - 29631232
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||| ||||||| ||||||||  || |||||||||||||||||||||    
T  29631180 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggt 29631232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 51614223 - 51614271
Alignment:
Q  33 gttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||  |||||||| |||||||||||||| |||||||||||||||    
T  51614223 gttggtaagaataatgcaaaatatatgcaaggtccgaggttcgaatccc 51614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 35191873 - 35191810
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||||||| || |||||||||||||||||||||  | |||||||| |||| ||||    
T  35191873 cttagctcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccccagacac 35191810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 38869580 - 38869521
Alignment:
Q  18 catgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||||||| |||||||||  | |||||||||||||| |||| | |||||||||||    
T  38869580 catgaacttagctcagttggtaagaacaatgcataatatatacaagatccgaggttcgaa 38869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 39869855 - 39869808
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    ||||||||| || |||||||||||||| |||||| |||||||||||||    
T  39869855 agttggtaaggacaatgcataatatatacaaggtccgaggttcgaatc 39869808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 47099091 - 47099032
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaa 83  Q
    ||||||| ||||| |||  ||||||||||||||||||||||| || ||||| ||||||||    
T  47099091 cttagctcagttgataagaataatgcataatatatgcaaggttcggggttcaaatcccaa 47099032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 10926474 - 10926524
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| ||||||||| || ||||||||||||||||||||| || |||||    
T  10926474 cttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttc 10926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 11969698 - 11969652
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    ||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  11969698 agttggtaaggaaaatgcataatacatgcaaggtccgaggttcgaat 11969652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 14771355 - 14771393
Alignment:
Q  43 ataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  14771355 ataatgcataatatatgcaaggtctgaggttcgaatccc 14771393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 19745354 - 19745408
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtac 67  Q
    |||||| ||| ||||||| |||| ||||||| ||||||||| |||||||||||||    
T  19745354 gtcctcttgagcttagctgagttagtaaagagaatgcataaaatatgcaaggtac 19745408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 21331484 - 21331418
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| ||| ||||||| ||||| ||  || ||||||||||||||||||||| || ||||||||||    
T  21331484 gtcctcgtgagcttagctcagttgttatggacaatgcataatatatgcaaggttcggggttcgaatc 21331418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 21513293 - 21513351
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccca 82  Q
    ||||||| ||||||||| || |||||||||| ||||||||||  | |||||||||||||    
T  21513293 cttagctcagttggtaaggacaatgcataatttatgcaaggtctggggttcgaatccca 21513351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 41990615 - 41990577
Alignment:
Q  49 cataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  41990615 cataatatatgcaaggtccgaggttcgaaccccaaacac 41990577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 48417915 - 48417873
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||    
T  48417915 agttggtaaatataatgcataatatatgcaaggttcgaagttc 48417873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 50570250 - 50570204
Alignment:
Q  19 atgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||| ||||||| |||||||| ||| |||||||||||||||||||||    
T  50570250 atgagcttagctcagttggtatagacaatgcataatatatgcaaggt 50570204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 5702233 - 5702181
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||| || |||||||||||||||||||||  ||||||||||    
T  5702233 cttagctcagttggtaa-gacaatgcataatatatgcaaggtttgaggttcgaa 5702181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 7859540 - 7859495
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||||| ||||||||||||||||||| ||||| || ||||||||    
T  7859540 agttggtatagataatgcataatatatgtaaggttcggggttcgaa 7859495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 15507319 - 15507270
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||| |||||| |||||||||||||||| |||||  ||||||||||||||    
T  15507319 agttagtaaaggtaatgcataatatatgtaaggtctgaggttcgaatccc 15507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25441560 - 25441515
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||||||  || |||||||||||||||||||||    
T  25441560 tgaacttagctcagttggtatggacaatgcataatatatgcaaggt 25441515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 30200831 - 30200884
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||| ||| || |||||||||||||||||||||  ||||||||||    
T  30200831 cttagctcagttgctaaggacaatgcataatatatgcaaggtttgaggttcgaa 30200884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 31214635 - 31214680
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||| |||||||||| | ||||||||||||||||| |||||    
T  31214635 tgaacttagttaagttggtagaaataatgcataatatatgtaaggt 31214680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 33223862 - 33223919
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgag 70  Q
    |||||| ||| ||||||| |||||||| | | ||||||||||||||||||||| ||||    
T  33223862 gtcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaaggttcgag 33223919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 46469282 - 46469338
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||||||| || |||||||||||||| |||||| || ||||||||||||    
T  46469282 cttagctcagttggtaaggacaatgcataatatattcaaggt-cggggttcgaatccc 46469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 53996304 - 53996361
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||||||  || |||||||||||||||||||||  | ||||||||||||    
T  53996304 cttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcgaatccc 53996361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 8139710 - 8139774
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    ||||| ||| ||||| | ||||||||  || |||||||||||||||||||||  |||||||||||    
T  8139710 tcctcgtgagcttagtttagttggtatggacaatgcataatatatgcaaggtctgaggttcgaat 8139774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 10498762 - 10498710
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  10498762 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 10498710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 12043163 - 12043095
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcat-aatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||| ||| |||| || ||||||||| || ||||||| |||||||||||||| |||||||| ||||||    
T  12043163 tcctcgtgagcttaactcagttggtaaggacaatgcattaatatatgcaaggttcgaggttcaaatccc 12043095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 16793041 - 16792989
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||  |||||||| ||| |||||||||||||||||||||    
T  16793041 gtcctcgtgagcttagcacagttggtatagacaatgcataatatatgcaaggt 16792989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 18870792 - 18870740
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 18870740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 19468464 - 19468512
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    ||||||||  || ||||||||||||||||||||| || |||||||||||    
T  19468464 agttggtatggacaatgcataatatatgcaaggtccgtggttcgaatcc 19468512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 25902778 - 25902826
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||||||  |||||||| ||||||| ||||||||||||||||    
T  25902778 tcatgagcttagcttggttggtaaggataatgtataatatatgcaaggt 25902826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 28694047 - 28694003
Alignment:
Q  21 gaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||| ||||||||||  |||||||||||||||||||||    
T  28694047 gaacttaactatgttggtaaaggcaatgcataatatatgcaaggt 28694003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 44579630 - 44579694
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||| ||||||| ||||||||  || ||||||||| ||||||||||| || ||||||||    
T  44579630 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaa 44579694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 54230154 - 54230114
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||| || |||||||||||||||||||||    
T  54230154 ttagctcagttggtaaggacaatgcataatatatgcaaggt 54230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 45944 - 46014
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacactac 90  Q
    ||||||||||| |||||||||  |||||| |||||||||||||| | ||||||||||| ||| ||||||||    
T  45944 tgaacttagctcagttggtaagaataatgtataatatatgcaagatccgaggttcgaaccccgaacactac 46014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 40099450 - 40099385
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||| ||||| ||||||| ||||||||| || ||||||||||||||||||||| |||||||||||||    
T  40099450 gtccccatgagcttagctcagttggtaaggacaatgcataatatatgcaaggt-cgaggttcgaatc 40099385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 13000690 - 13000739
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggtt 73  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  13000690 cttagctcagttggtaaagataatgcataatatatgtaaggtccgaggtt 13000739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 21558873 - 21558812
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||||||||||| || |||||| || ||||||||||||||||||||| ||||||||    
T  21558873 gtcctcgtgaacttagctcagctggtaaggacaatgcataatatatgcaaggtccgaggttc 21558812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 37320565 - 37320520
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||    
T  37320565 agttggtaaagacaatgcataatatatgcaaggttcgaggttcgaa 37320520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 7206119 - 7206179
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggtt 73  Q
    |||||| ||| ||||||| |||||||| ||| ||||||||||||||||||||| |||||||    
T  7206119 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtccgaggtt 7206179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 10065474 - 10065517
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  10065474 tgaacttagctaagttggtaaggacaatgcataatatatgcaag 10065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 12124551 - 12124613
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    |||||| ||||||||| || ||||||||||||||||||||| || |||||||| | |||||||    
T  12124551 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacctcaaacac 12124613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 19179106 - 19179040
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacactac 90  Q
    ||||||| ||||||||| || |||||||||||||||||||||  | | |||||||||| ||||||||    
T  19179106 cttagctcagttggtaaggacaatgcataatatatgcaaggtctgcgcttcgaatcccgaacactac 19179040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 22608532 - 22608582
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| |||||||| ||| |||||||||||||||||||||| |||||||    
T  22608532 cttagctcagttggtagagacaatgcataatatatgcaaggtatgaggttc 22608582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 38835300 - 38835258
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  38835300 tgaacttagctaagttggtaaggacaatgcataatatatgcaa 38835258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 20120777 - 20120720
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||||||| || ||||||||||||||||||||| || ||||| ||||||    
T  20120777 cttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcaaatccc 20120720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 24593381 - 24593434
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||| || ||||||||||||||||||||| || ||||||||    
T  24593381 cttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaa 24593434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 30243244 - 30243305
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||||||||||| |||||||| ||| |||||||||||||| |||||| || |||||    
T  30243244 gtcctcgtgaacttagctcagttggtagagacaatgcataatatatacaaggttcggggttc 30243305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 18782607 - 18782555
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||  ||||||||||||||| | | |||||||||||||||||||||    
T  18782607 gtcctcatgagtttagctaagttggtagaaacaatgcataatatatgcaaggt 18782555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 20455885 - 20455953
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| | ||||||  || ||||||||||||||||||||| || ||||||||||||    
T  20455885 gtcctcgtgagcttagctcaattggtatggacaatgcataatatatgcaaggtccggggttcgaatccc 20455953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 22523079 - 22523011
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| ||||||||  || ||| ||||||||||||||||| |||||||| ||||||    
T  22523079 gtcctcgtgagcttagctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaatccc 22523011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 24592913 - 24592861
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| ||||||||  || |||||||||||||||||||||    
T  24592913 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaaggt 24592861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 26999104 - 26999156
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||| | |||||||| ||| |||||||||||||||||||||    
T  26999104 gtcctcgtgaacttagttcagttggtagagacaatgcataatatatgcaaggt 26999156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 41778979 - 41778943
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||||||||||||||| |||||||||||||||    
T  41778979 aatgcataatatatgcaaggtccgaggttcgaatccc 41778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 12124689 - 12124752
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||||||| || ||||||||||||||||||||| ||  ||||||| | |||||||    
T  12124689 cttagctcagttggtaaggacaatgcataatatatgcaaggtccggagttcgaacctcaaacac 12124752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 16221415 - 16221345
Alignment:
Q  11 acgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||||||  |||||| ||||||||   | ||||||||| ||||||||||| || ||||||||||||    
T  16221415 acgtcctcatgagtttagctcagttggtatgaacaatgcataaaatatgcaaggttcggggttcgaatccc 16221345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 22571932 - 22571866
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| ||||||||||| ||||| || ||| |||||||||||||||||| || || ||||| ||||    
T  22571932 gtcctcgtgaacttagctcagttgatatagacaatgcataatatatgcaatgtccggggttcaaatc 22571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 27935069 - 27935119
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccca 82  Q
    ||||||||  || |||||| |||||||||||||||||||||||||| ||||    
T  27935069 agttggtagggacaatgcagaatatatgcaaggtacgaggttcgaacccca 27935119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31543006 - 31543076
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaa 83  Q
    |||||| ||| ||||||| || |||||  |||||||||||||||||||||||| || ||||| || |||||    
T  31543006 gtcctcgtgagcttagctcagatggtatggataatgcataatatatgcaaggtccggggttcaaaccccaa 31543076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 36547291 - 36547237
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    ||||||| ||||||||| ||||||| ||||||||||||| ||  |||||||||||    
T  36547291 cttagctcagttggtaaggataatgtataatatatgcaaagtttgaggttcgaat 36547237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 39088859 - 39088817
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||||| || |||||||||||| ||||||||||||||||||    
T  39088859 tgaacttaactcagttggtaaagacaatgcataatatatgcaa 39088817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 43356577 - 43356535
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||||||||||||||||| ||||||||||| || ||||||    
T  43356577 aatgcataatatatgcaaggtccgaggttcgaaccctaaacac 43356535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 10156022 - 10156079
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||||||| || ||| ||||||||||||||||| ||  |||||||||||    
T  10156022 cttagctcagttggtaaggacaatacataatatatgcaaggttcggtgttcgaatccc 10156079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 15654925 - 15654884
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||||||| |||||||||||| |||||||||||    
T  15654925 cttagctcagttggtaaggataatgcataaaatatgcaaggt 15654884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 18231529 - 18231488
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||||||| || |||||||||||||||||||||    
T  18231529 cttagctcagttggtaaggacaatgcataatatatgcaaggt 18231488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 24393250 - 24393303
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||| ||| || |||||||||||||||||||||  ||||||||||    
T  24393250 cttagctcagttgttaaggacaatgcataatatatgcaaggtctgaggttcgaa 24393303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 24520695 - 24520658
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgca 61  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  24520695 cttagcttagttggtaaagacaatgcataatatatgca 24520658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 24581080 - 24581023
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| |||||| ||||  |||| | ||||||||||||||||||||| ||||||||    
T  24581080 tcatgaagttagctcagttcataaaaacaatgcataatatatgcaaggttcgaggttc 24581023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25598622 - 25598577
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||||||  || |||||||||||||||||||||    
T  25598622 tgaacttagctcagttggtatggacaatgcataatatatgcaaggt 25598577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 29809339 - 29809388
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||  || ||||||||||||||| |||||||| ||||||||||||    
T  29809339 agttggtagggacaatgcataatatatgaaaggtacggggttcgaatccc 29809388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 30089043 - 30089104
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||||||||||| ||||||||  || |||||||||||||| |||||| || |||||    
T  30089043 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttc 30089104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 30125647 - 30125708
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||||||||||| ||||||||  || |||||||||||||| |||||| || |||||    
T  30125647 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttc 30125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 33401614 - 33401577
Alignment:
Q  42 gataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  33401614 gataatgcatgatatatgcaaggtacgaggttcaaatc 33401577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 43117245 - 43117196
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||||||||| || |||||||||||||||||||||  |||||||    
T  43117245 ttagctcagttggtaaggacaatgcataatatatgcaaggtctgaggttc 43117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 9383276 - 9383224
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  9383276 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 9383224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 9686451 - 9686503
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||| |||||| |||||||| ||| ||| |||||||||||||||||    
T  9686451 gtcctcgtgaatttagctcagttggtatagacaatacataatatatgcaaggt 9686503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 11560492 - 11560544
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||| ||||||| | ||||||  || |||||||||||||||||||||    
T  11560492 gtcctcatgagcttagctcaattggtagggacaatgcataatatatgcaaggt 11560544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 12231891 - 12231923
Alignment:
Q  33 gttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||| ||||||||||||||||||||||||    
T  12231891 gttggtaaggataatgcataatatatgcaaggt 12231923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 16385413 - 16385453
Alignment:
Q  19 atgaacttagctaagttggtaaagataatgcataatatatg 59  Q
    ||||| |||| |||||||||||||| |||||||||||||||    
T  16385413 atgaatttagttaagttggtaaagacaatgcataatatatg 16385453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 21482574 - 21482534
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  21482574 ttagctcagttggtaaggataatgtataatatatgcaaggt 21482534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 26400745 - 26400797
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||| |||  || ||||||||| || |||||||||||||||||||||    
T  26400745 gtcctcatgagctttactcagttggtaaggacaatgcataatatatgcaaggt 26400797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 28771588 - 28771640
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||||||||| || ||||||||||||||||||| | || ||||||||    
T  28771588 ttagctcagttggtaaggacaatgcataatatatgcaagatccgcggttcgaa 28771640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 34345422 - 34345370
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||||||| || ||||| || ||||||| ||||||||||| |||||    
T  34345422 gtcctcatgaacttatctcagttgatatagataatacataatatatgtaaggt 34345370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 34903511 - 34903575
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||| ||||| ||||| | ||||||||| || | |||||||||||||||||||  ||||||||||    
T  34903511 gtccccatgagcttagttcagttggtaaggacagtgcataatatatgcaaggtctgaggttcgaa 34903575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 35685116 - 35685076
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||| || |||||||||||||||||||||    
T  35685116 ttagctcagttggtaaggacaatgcataatatatgcaaggt 35685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 42200686 - 42200746
Alignment:
Q  18 catgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    |||||| ||| || |||||||||||| ||| |||||||||||||||||  || ||||||||    
T  42200686 catgaagttaactcagttggtaaagacaatacataatatatgcaaggtctgatgttcgaat 42200746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 38448935 - 38448865
Alignment:
Q  11 acgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| | ||| ||||||| ||||||||| || ||||||||||||||||||||| || ||||||||||||    
T  38448935 acgtccccgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatccc 38448865  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 30795695 - 30795759
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||||||||||| |||||||||  | ||||||||||||||||||||| | |||||||||    
T  30795695 gtcctcgtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccaaggttcgaa 30795759  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 50263378 - 50263426
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  50263378 tcatgagcttagctcagttggtaacgataatgcataatatatgcaaggt 50263426  T

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Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 34808619 - 34808564
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    ||||||| ||||| ||| || ||||||||||||||||||||| |||||||||||||    
T  34808619 cttagctcagttgttaaggacaatgcataatatatgcaaggttcgaggttcgaatc 34808564  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 51509640 - 51509711
Alignment:
Q  16 ctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||| ||||||||| ||||||||| ||| |||||||||||| ||||||| ||| ||||||| ||| |||||    
T  51509640 ctcatcaacttagctcagttggtaacgattatgcataatatacgcaaggtccgatgttcgaaccccgaacac 51509711  T

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Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 8269436 - 8269374
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| ||||||||||| ||||||||| || ||| ||||||||||||||||| || |||||    
T  8269436 cgtcctcgtgaacttagctcagttggtaaggacaatacataatatatgcaaggtccggggttc 8269374  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 28979343 - 28979277
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| ||||||||||| | ||| || ||||||||||||||||||||||| | |||||||| ||||    
T  28979343 gtcctcctgaacttagctcatttgatagagataatgcataatatatgcaagattcgaggttcaaatc 28979277  T

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Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 10843381 - 10843336
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  10843381 tgaacttagctcagttgataaggataatgcataatatatgcaaggt 10843336  T

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Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 13779572 - 13779621
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||||||||||||||| ||||| || ||| ||||||||||||||||||    
T  13779572 gtcctcatgaacttagctcagttgatatagacaatgcataatatatgcaa 13779621  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 47528503 - 47528450
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||| || ||||||||||||| ||||||| |||||||||||    
T  47528503 cttagctcagttggtaaggacaatgcataatatacgcaaggtccgaggttcgaa 47528450  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 47719155 - 47719106
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||| |||||||||||||||||||||||| ||  |||||||||||    
T  47719155 agttggtaaggataatgcataatatatgcaaggttcggagttcgaatccc 47719106  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 50638972 - 50638915
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||||||| || ||||||||||||||||||||| |  ||||||||||||    
T  50638972 cttagctcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaatccc 50638915  T

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Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 9872159 - 9872103
Alignment:
Q  26 tagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccca 82  Q
    ||||| ||||||||| ||||||||||||||||||||||||  | |||||||| ||||    
T  9872159 tagctcagttggtaaggataatgcataatatatgcaaggtttgcggttcgaacccca 9872103  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 17221571 - 17221523
Alignment:
Q  29 ctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||||||||  | ||||||||||||||||||||| |||||||||||    
T  17221571 ctaagttggtaagaacaatgcataatatatgcaaggtccgaggttcgaa 17221523  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 24124885 - 24124829
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||| ||| || ||||||||||||||||||||| ||||||| |||||||    
T  24124885 ttagctcagttgttaaggacaatgcataatatatgcaaggttcgaggtttgaatccc 24124829  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 24631852 - 24631900
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    ||||||||| |||||||||||||||||||||| | | ||||||||||||    
T  24631852 agttggtaaggataatgcataatatatgcaagatccaaggttcgaatcc 24631900  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 27127218 - 27127270
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||| ||||||| |||| |||| ||||||||||||||||| ||||||    
T  27127218 gtcctcatgagcttagctcagttagtaaggataatgcataatatatacaaggt 27127270  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 31061970 - 31061918
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||||||| || ||||||||| || |||||||| ||||||||||||    
T  31061970 gtcctcatgaacttaactcagttggtaaggacaatgcatattatatgcaaggt 31061918  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 34632163 - 34632231
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| |||||||| ||| |||| |||||||||||||| | |||||||| ||||||    
T  34632163 gtcctcgtgagcttagctcagttggtatagacaatgtataatatatgcaagatccgaggttcaaatccc 34632231  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 52441578 - 52441526
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| |||||||| ||| |||||||||||||||||||||    
T  52441578 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaggt 52441526  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 63
Target Start/End: Original strand, 40618923 - 40618954
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaag 63  Q
    ||||||||||||||||||||||||||||||||    
T  40618923 agttggtaaagataatgcataatatatgcaag 40618954  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 44678084 - 44678017
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    |||||||| | ||||||| |||| ||| ||| ||||||||||||||||||||| || ||||| |||||    
T  44678084 gtcctcataagcttagctcagtttgtatagacaatgcataatatatgcaaggttcggggttcaaatcc 44678017  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 52202358 - 52202319
Alignment:
Q  19 atgaacttagctaagttggtaaagataatgcataatatat 58  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  52202358 atgaacttagctcagttggtagagataatgcataatatat 52202319  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 31401688 - 31401646
Alignment:
Q  45 aatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||    
T  31401688 aatgcataatatatgcaaggtccgagattcgaatcccagacac 31401646  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 2817440 - 2817379
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||| |||||| |||||| ||||||||| || ||||||||||||||| ||||| ||| ||||    
T  2817440 gtccccatgaatttagctcagttggtaaggacaatgcataatatatgtaaggtccgaagttc 2817379  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 3510001 - 3509956
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||||||  || |||||||||||||||||||||    
T  3510001 tgaacttagctcagttggtatggacaatgcataatatatgcaaggt 3509956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 3935851 - 3935802
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||| ||| |||| |||||||| || ||||||||||||||||||||||    
T  3935851 gtcctcgtgagcttaactaagttgttatagataatgcataatatatgcaa 3935802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 10132504 - 10132459
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||| | ||||||||| || |||||||||||||||||||||    
T  10132504 tgaacttagatcagttggtaaggacaatgcataatatatgcaaggt 10132459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 10385311 - 10385356
Alignment:
Q  42 gataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    |||||||||||||||||||||||| ||  ||| |||||||||||||    
T  10385311 gataatgcataatatatgcaaggttcggagtttgaatcccaaacac 10385356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 13054878 - 13054931
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||  || |||||||||||||||||||||  ||||||||||    
T  13054878 cttagcttagttggtagggacaatgcataatatatgcaaggtcggaggttcgaa 13054931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 13615666 - 13615605
Alignment:
Q  26 tagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||| ||||||||| || ||||||||||| ||||||||| | ||||||||| ||| |||||    
T  13615666 tagctcagttggtaaggacaatgcataatacatgcaaggtccaaggttcgaaccccgaacac 13615605  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 13794564 - 13794523
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||| ||| ||||||||||||||||||||||||    
T  13794564 cttagctcagttgataaggataatgcataatatatgcaaggt 13794523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 17283956 - 17283997
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||||||| || |||||||||||||||||||||    
T  17283956 cttagctcagttggtaaggacaatgcataatatatgcaaggt 17283997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 22946610 - 22946565
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| |||||||||  | |||||||||||||||||||||    
T  22946610 tgaacttagcttagttggtaagaacaatgcataatatatgcaaggt 22946565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 23460483 - 23460535
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaat 78  Q
    ||||||||||||||| | ||||||||||| |||||||||||  |||||||||||    
T  23460483 ttagctaagttggtaga-ataatgcataaaatatgcaaggtttgaggttcgaat 23460535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 26803518 - 26803469
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaa 62  Q
    |||||| ||||||||||| ||||||||  || ||||||||||||||||||    
T  26803518 gtcctcgtgaacttagctcagttggtatggacaatgcataatatatgcaa 26803469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 29251751 - 29251812
Alignment:
Q  16 ctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||||||||||||  ||| |||  || |||||||||||||||||||||  ||||||||||    
T  29251751 ctcatgaacttagctctgtttgtatcgacaatgcataatatatgcaaggtctgaggttcgaa 29251812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 35473957 - 35473998
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| | ||||||| ||||||||||||||||||||||||    
T  35473957 cttagctcaattggtaaggataatgcataatatatgcaaggt 35473998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 35805355 - 35805318
Alignment:
Q  22 aacttagctaagttggtaaagataatgcataatatatg 59  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  35805355 aacttagctcagttggtagagataatgcataatatatg 35805318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 39387847 - 39387806
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  39387847 cttagctaagttggtatggataatgcataaaatatgcaaggt 39387806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 41763222 - 41763161
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| ||||||| ||||||||  |||||||||||| ||||||||||| || |||||    
T  41763222 gtcctcgtgagcttagctcagttggtagggataatgcataaaatatgcaaggtccggggttc 41763161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 47961344 - 47961287
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccca 82  Q
    |||||| |||||| | ||| ||||||||||||||||||||| ||||||| ||| ||||    
T  47961344 ttagctcagttggcagagacaatgcataatatatgcaaggtccgaggtttgaaaccca 47961287  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 12500924 - 12500987
Alignment:
Q  19 atgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaa 83  Q
    ||||||||||| | |||||||| || |||||||||||||||||| || || ||||||||| ||||    
T  12500924 atgaacttagcca-gttggtaaggacaatgcataatatatgcaaagttcggggttcgaataccaa 12500987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 21400090 - 21400038
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 21400038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 23405425 - 23405357
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||| ||||| |||| || ||||| ||| || ||||||||||||||||||||| |  ||||||||||||    
T  23405425 gtccccatgagcttaacttagttgttaaggacaatgcataatatatgcaaggtccagggttcgaatccc 23405357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 26705594 - 26705646
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| |||||||||  | ||| |||||||||||||||||    
T  26705594 gtcctcgtgaacttagcttagttggtaagaacaatacataatatatgcaaggt 26705646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 28679695 - 28679747
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaa 84  Q
    |||||||||||| |||||||||||| |||||||| ||  |||||| |||||||    
T  28679695 agttggtaaagacaatgcataatatctgcaaggtccgctgttcgattcccaaa 28679747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 30548154 - 30548106
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||| || ||||||||| || |||||||||||||||||||||    
T  30548154 tcatgagcttaacttagttggtaaggacaatgcataatatatgcaaggt 30548106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 30561729 - 30561769
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  30561729 ttagctaagttggtaagaacaatgcataatatatgcaaggt 30561769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 31092655 - 31092707
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||| |||||||||| || | ||||||| |||||||||||||||||| |||||    
T  31092655 gtccccatgaacttaactcatttggtaaggataatgcataatatatgtaaggt 31092707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 32826753 - 32826709
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcga 76  Q
    |||||||||| ||||||||||||||||| ||||| | ||||||||    
T  32826753 agttggtaaaaataatgcataatatatgtaaggttcaaggttcga 32826709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 36371107 - 36371055
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| |||||||| ||| ||||||||||||||| |||||    
T  36371107 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggt 36371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 40613039 - 40613083
Alignment:
Q  35 tggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| || ||||||||||||||||||||| || ||||||||||    
T  40613039 tggtaaggacaatgcataatatatgcaaggtccggggttcgaatc 40613083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 42045439 - 42045387
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||||||  || |||||||||||||||||||||    
T  42045439 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggt 42045387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 45418110 - 45418078
Alignment:
Q  33 gttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||| ||||||||||||||||||||||||    
T  45418110 gttggtaaggataatgcataatatatgcaaggt 45418078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 47417777 - 47417829
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||||||| || | ||||| | || |||||||||||||||||||||    
T  47417777 gtcctcatgaacttaactcaattggttaggacaatgcataatatatgcaaggt 47417829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 2962786 - 2962725
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||| | | |||||||||||||||||||||||||||||||| || |||| |||||||    
T  2962786 tgaacttagttcaattggtaaagataatgcataatatatgcaaggttcggggtttgaatccc 2962725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 7872808 - 7872763
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||    
T  7872808 tgaacttagctcagttggtaaggacaatgcataatatatgcaaggt 7872763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 21105608 - 21105661
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||  || ||||||||||||||||||||| |||||||||||    
T  21105608 cttagctcagttggtatggaaaatgcataatatatgcaaggttcgaggttcgaa 21105661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 41029277 - 41029334
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||| ||||||||| || |||| |||||||||||||||| || ||||||||||||    
T  41029277 cttagctcagttggtaaggacaatgtataatatatgcaaggtccggggttcgaatccc 41029334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 45425466 - 45425515
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||| |||||| ||||||||||||||||||||| || ||||||||||||    
T  45425466 agttgataaagacaatgcataatatatgcaaggttcggggttcgaatccc 45425515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 46987091 - 46987144
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||| || ||||||||||||||||||||| || ||||||||    
T  46987091 cttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaa 46987144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 3337332 - 3337272
Alignment:
Q  17 tcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||||||||||| |||||||| ||| ||||||||||| ||| ||||| | |||||||||    
T  3337332 tcatgaacttagcttagttggtagagacaatgcataataaatgtaaggttcaaggttcgaa 3337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 2618692 - 2618739
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    ||||||||| || ||||||||||||||||||||| || ||||||||||    
T  2618692 agttggtaaggacaatgcataatatatgcaaggtccggggttcgaatc 2618739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 5584641 - 5584708
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    |||||| ||| ||||||| | |||||||||||||| |||||||||||||| || || | |||||||||    
T  5584641 gtcctcgtgagcttagctcaattggtaaagataatacataatatatgcaaagttcgggattcgaatcc 5584708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 5589601 - 5589668
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcc 80  Q
    |||||| ||| ||||||| | |||||||||||||| |||||||||||||| || || | |||||||||    
T  5589601 gtcctcgtgagcttagctcaattggtaaagataatacataatatatgcaaagttcgggattcgaatcc 5589668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 34568391 - 34568348
Alignment:
Q  22 aacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||    
T  34568391 aacttagctcagttgataaggataatgcataatatatgcaaggt 34568348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 38858218 - 38858171
Alignment:
Q  34 ttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||||||| | ||||||||||||| ||||| |||||||||||||||    
T  38858218 ttggtaaagacagtgcataatatatgtaaggtccgaggttcgaatccc 38858171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 3532576 - 3532650
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacact 88  Q
    ||||| ||| ||||| | ||||||||  |||| ||||||||||||||| ||  ||||||||||| ||||||||||    
T  3532576 tcctcgtgatcttagttcagttggtagggatattgcataatatatgcaggggccgaggttcgaaccccaaacact 3532650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 3584217 - 3584255
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgag 70  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  3584217 agttggtaaggacaatgcataatatatgcaaggtacgag 3584255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 8615028 - 8615074
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgag 70  Q
    ||||||| ||||||||| || ||||||||||||||||||||| ||||    
T  8615028 cttagctcagttggtaaggacaatgcataatatatgcaaggtccgag 8615074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 8683064 - 8683114
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaag 63  Q
    |||||| ||| ||||||| |||||||| ||| |||||||||||||||||||    
T  8683064 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 8683114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 18714453 - 18714503
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||| ||||||||| || ||||||||||||||||||||| || |||||    
T  18714453 cttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttc 18714503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 39280878 - 39280824
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||| || |||||    
T  39280878 tgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccggggttc 39280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 41425223 - 41425289
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaaca 86  Q
    ||||| ||||| ||||  || |||||||||||||||||||||| ||| ||||||| |||| ||||||    
T  41425223 tgaacatagctcagttaatagagataatgcataatatatgcaatgtatgaggttcaaatctcaaaca 41425289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 42336064 - 42336130
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| |||| |||||| ||||| ||| || ||||||||||| ||||||||| || ||||||||||    
T  42336064 gtcctcgtgaatttagctcagttgataaggacaatgcataatacatgcaaggtccggggttcgaatc 42336130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 1046569 - 1046618
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||| ||||||||||||||||||||||| |||||  | ||||||||||||    
T  1046569 agttagtaaagataatgcataatatatgtaaggtctggggttcgaatccc 1046618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 10244721 - 10244782
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| ||||||| ||||||||  || ||||||||||||||||||||| || |||||    
T  10244721 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 10244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 21050278 - 21050237
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||||||| || |||||||||||||||||||||    
T  21050278 cttagctcagttggtaaggacaatgcataatatatgcaaggt 21050237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 23069913 - 23069860
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| |||||||||||| ||  |||||||||||||||||| | ||||||||    
T  23069913 cttagctcagttggtaaagacaacacataatatatgcaaggtatggggttcgaa 23069860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 24991786 - 24991839
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||| || ||||||||||||||||||| |||| | ||||||    
T  24991786 cttagctcagttggtaaggacaatgcataatatatgcaagatacgggattcgaa 24991839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 3830062 - 3830114
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| |||| |||  || |||||||||||||||||||||    
T  3830062 gtcctcgtgaacttagctcagtttgtagggacaatgcataatatatgcaaggt 3830114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 10362364 - 10362308
Alignment:
Q  20 tgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcga 76  Q
    |||||||| || ||||| ||| || ||||||||||||||||||||| |||| |||||    
T  10362364 tgaacttaactcagttgataaggagaatgcataatatatgcaaggttcgagattcga 10362308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 22690103 - 22690051
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||| |||  |||||||||||||||||||||||    
T  22690103 gtcctcgtgagcttagctcagttgctaagaataatgcataatatatgcaaggt 22690051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 24226048 - 24225984
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||||||||||| |||| |||  || ||||||||| ||||| ||||| |||||||||||    
T  24226048 gtcctcgtgaacttagctcagttcgtatggacaatgcataaaatatgtaaggtccgaggttcgaa 24225984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 30006159 - 30006107
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| ||||||||   |||||||||||| ||||||||||    
T  30006159 gtcctcgtgaacttagctcagttggtatgaataatgcataatgtatgcaaggt 30006107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 30464004 - 30463964
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| |||| ||| |||||||||||||||||||||||||    
T  30464004 ttagctcagttagtatagataatgcataatatatgcaaggt 30463964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 34773225 - 34773285
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggtt 73  Q
    ||||||||||  |||| | ||||||||  || |||||||||||||||||||||| ||||||    
T  34773225 gtcctcatgactttagttcagttggtagggacaatgcataatatatgcaaggtatgaggtt 34773285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 41527555 - 41527611
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgag 70  Q
    ||||| ||| ||||||| ||||||||  || ||||||||||||||||||||| ||||    
T  41527555 tcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaaggtccgag 41527611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 47342671 - 47342723
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||||||||||| ||||||||  || ||||||||| |||||||||||    
T  47342671 gtcctcgtgaacttagctcagttggtatggacaatgcataaaatatgcaaggt 47342723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 21847188 - 21847256
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||| ||||||| ||||||||  || ||| |||||||||||||||||||| ||||||||||||    
T  21847188 gtcctcttgagcttagctcagttggtagggacaatacataatatatgcaaggtacggggttcgaatccc 21847256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 32193914 - 32193858
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||||| ||||||    
T  32193914 ttagctcagttggtaagaacaatgcataatatatgcaaggtacgaggttcaaatccc 32193858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 4450267 - 4450322
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    ||||||| ||||| |||||| ||||||||||||||||||||| || ||||||||||    
T  4450267 cttagctcagttgataaagacaatgcataatatatgcaaggtccggggttcgaatc 4450322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 19554156 - 19554199
Alignment:
Q  22 aacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  19554156 aacttagcttagttggtaaagacaatgcataatatatgcaaggt 19554199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 23629905 - 23629830
Alignment:
Q  12 cgtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||||||||| | ||||||| || |||||||||||||||||||||| || |||| || ||| |||||    
T  23629905 cgtcctcgtgaacttagctcaattggtaatgacaatgcataatatatgcaaggtatgaagttcaaaccccgaacac 23629830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 32409244 - 32409193
Alignment:
Q  14 tcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||||||||||| || |||||||||||| ||||||||||||||| |||||    
T  32409244 tcctcatgaacttaactgagttggtaaagacaatgcataatatatgtaaggt 32409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 35110060 - 35110122
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    |||||| | ||||| |||||||||||||||||||| |||||  |||||||||| |||||||||    
T  35110060 ttagctcaattggtcaagataatgcataatatatgtaaggtttgaggttcgaaccccaaacac 35110122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 1918506 - 1918461
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||    
T  1918506 agttggtatagacaatgcataatatatgcaaggtccgaggttcgaa 1918461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 30370217 - 30370164
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggta 66  Q
    |||||| ||| ||||| | |||||||||||||||||||||||||||| ||||||    
T  30370217 gtcctcgtgagcttagttcagttggtaaagataatgcataatatatgtaaggta 30370164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 4922475 - 4922415
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggtt 73  Q
    ||||||||||||||| || ||||||||  ||||||| ||||||||||||| ||| ||||||    
T  4922475 gtcctcatgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtt 4922415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 8810634 - 8810686
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| |||||||||||| ||| |||||||||||||||||    
T  8810634 gtcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaaggt 8810686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 404176 - 404231
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||||| || |||||||||||||||||| || ||||||||||| |||| ||||    
T  404176 agttggtaaggacaatgcataatatatgcaatgtccgaggttcgaaccccagacac 404231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 17829364 - 17829301
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||| ||||||||| ||  ||||||||||||||||| || ||||||||||| ||| |||||    
T  17829364 cttagctcagttggtaaggactatgcataatatatgcaaagtccgaggttcgaaccccgaacac 17829301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 8217377 - 8217447
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatcccaa 83  Q
    |||||| ||| ||||||| || ||||| | | ||| ||||||||||||||||| |||||||| ||||||||    
T  8217377 gtcctcgtgagcttagctcagctggtagacacaatacataatatatgcaaggttcgaggttcaaatcccaa 8217447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 30639481 - 30639427
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatc 79  Q
    |||||| ||||||||   |||||||||||||||||||||||  ||||||||||||    
T  30639481 ttagctcagttggtaggaataatgcataatatatgcaaggtctgaggttcgaatc 30639427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 31971542 - 31971584
Alignment:
Q  32 agttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    ||||||||| || ||||||||||||||||||||| ||||||||    
T  31971542 agttggtaaggacaatgcataatatatgcaaggtccgaggttc 31971584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 334145 - 334186
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    ||||||| ||||| |||||| |||||||||||||||||||||    
T  334145 cttagctcagttgataaagacaatgcataatatatgcaaggt 334186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 655805 - 655752
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    ||||||| ||||||||  || ||||||||||||||||||||| || ||||||||    
T  655805 cttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcgaa 655752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 32053782 - 32053843
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttc 74  Q
    |||||| ||| ||||||| ||||||||  || ||||||||||||||||||||| || |||||    
T  32053782 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttc 32053843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 331953 - 331901
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| |||| || |||||||| ||| |||||||||||||||||||||    
T  331953 gtcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaaggt 331901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 788860 - 788912
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| |||| || ||||||||| || |||||||||||||||||||||    
T  788860 gtcctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggt 788912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 2726484 - 2726420
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| | |||||| || ||||||||  || ||||||||||||||||||||| || ||||||||    
T  2726484 gtcctcgtaaacttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcgaa 2726420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 7081721 - 7081669
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||| |||||| ||| |||||||||||||||||    
T  7081721 gtcctcgtgagcttagctcagttgataaagacaatacataatatatgcaaggt 7081669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 12412271 - 12412323
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| |||| || |||||||| ||| |||||||||||||||||||||    
T  12412271 gtcctcgtgagcttaacttagttggtagagacaatgcataatatatgcaaggt 12412323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 15291757 - 15291693
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaa 77  Q
    |||||| ||| |||| || ||||||||| || |||| ||||||||||||||||  ||||||||||    
T  15291757 gtcctcgtgagcttaacttagttggtaaggacaatgaataatatatgcaaggtttgaggttcgaa 15291693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 17151230 - 17151282
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||||||||||||  || ||| |||||||||||||||||    
T  17151230 gtcctcgtgagcttagctaagttggtagtgacaatacataatatatgcaaggt 17151282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 18256877 - 18256929
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| ||||| ||| || |||||||||||||||||||||    
T  18256877 gtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaaggt 18256929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 75333 - 75387
Alignment:
Q  27 agctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||| ||||||||| || ||||||||||||||||||||| || ||||||||||||    
T  75333 agctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatccc 75387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 3135 - 3187
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| ||||||| |||||||||||| ||| |||||||||||||||||    
T  3135 gtcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaaggt 3187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 37540 - 37597
Alignment:
Q  24 cttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    ||||||||||||||||   | ||||||||| ||||||||||| || ||||||||||||    
T  37540 cttagctaagttggtatgaacaatgcataaaatatgcaaggtccggggttcgaatccc 37597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 42969 - 42925
Alignment:
Q  43 ataatgcataatatatgcaaggtacgaggttcgaatcccaaacac 87  Q
    ||||||||||||||||||||||| || | ||||||||||| ||||    
T  42969 ataatgcataatatatgcaaggttcgggattcgaatcccagacac 42925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 53832 - 53776
Alignment:
Q  25 ttagctaagttggtaaagataatgcataatatatgcaaggtacgaggttcgaatccc 81  Q
    |||||| ||||||||| || | ||||||||| ||||||||| || ||||||||||||    
T  53832 ttagctcagttggtaaggacagtgcataatacatgcaaggtccggggttcgaatccc 53776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 58847 - 58907
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggtacgaggtt 73  Q
    |||||| ||| ||||||| ||||||||  ||||||||||||| ||| |||||| |||||||    
T  58847 gtcctcgtgagcttagctcagttggtatggataatgcataatgtatacaaggtccgaggtt 58907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 1565 - 1617
Alignment:
Q  13 gtcctcatgaacttagctaagttggtaaagataatgcataatatatgcaaggt 65  Q
    |||||| ||| |||| || ||||||||| |||| |||||||||||||||||||    
T  1565 gtcctcgtgagcttaactcagttggtaacgatagtgcataatatatgcaaggt 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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