View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9979_high_15 (Length: 226)
Name: NF9979_high_15
Description: NF9979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9979_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 6321822 - 6322016
Alignment:
| Q |
19 |
acaaagtacctgaagtgatatttaaagattacaaactccgccctgatattttaccaccatgttttgataagcttctagctggcttgttattgcgtccctc |
118 |
Q |
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| T |
6321822 |
acaaagtacctgaagtgatatttaaagattacaaactccgccctgatattttaccaccatgttttgataagcttctagctggcttgttattgcgtccctc |
6321921 |
T |
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| Q |
119 |
taagcgcccttggaagtccgatatgaatttgtacagttatagcaataatgctgctgccccagcagcatttgatcagctcagaaaatatcctatgc |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6321922 |
taagcgcccttggaagtccgatatgaatttgtacagttatagcaataatgctgctgccccagcagcatttgatcagctcagaaaatatcctatgc |
6322016 |
T |
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