View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9979_high_16 (Length: 203)
Name: NF9979_high_16
Description: NF9979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9979_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 45792723 - 45792553
Alignment:
| Q |
14 |
cataggaataaacagtttactatgagtcacaaaacagtataactatagcacagtgcatgtagcatgtgtacaagtataactaacataatattttttcatg |
113 |
Q |
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| T |
45792723 |
cataggaataaacagtttactatgagtcacaaaacagtataactatagcacagtgcatgtagcatgtgtacaagtataactaacatgatattttttcatg |
45792624 |
T |
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| Q |
114 |
agtatatagattttaaagaagtaaactaatacaatgctaaaatcattgttattaataatttaagtatatcc |
184 |
Q |
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| T |
45792623 |
agtatatagattttaaagaagtaaactaatacaatgctaaaatcattgttattaataatttaagtatatcc |
45792553 |
T |
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