View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9980_low_32 (Length: 267)

Name: NF9980_low_32
Description: NF9980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9980_low_32
NF9980_low_32
[»] chr4 (4 HSPs)
chr4 (18-261)||(23596537-23596780)
chr4 (18-261)||(23587685-23587928)
chr4 (18-255)||(54396396-54396633)
chr4 (192-241)||(35132595-35132644)
[»] chr7 (8 HSPs)
chr7 (18-261)||(8102640-8102883)
chr7 (18-229)||(8017397-8017608)
chr7 (18-235)||(39985619-39985836)
chr7 (27-238)||(8382851-8383062)
chr7 (24-150)||(8581679-8581805)
chr7 (21-136)||(7877810-7877925)
chr7 (204-238)||(8602133-8602167)
chr7 (18-82)||(8609890-8609954)
[»] chr2 (7 HSPs)
chr2 (18-235)||(17716665-17716882)
chr2 (18-235)||(17717926-17718146)
chr2 (28-148)||(17622010-17622130)
chr2 (28-148)||(17648106-17648226)
chr2 (18-202)||(17666694-17666878)
chr2 (28-148)||(17705803-17705923)
chr2 (28-148)||(17704120-17704240)
[»] chr6 (1 HSPs)
chr6 (24-124)||(11209371-11209471)
[»] chr1 (1 HSPs)
chr1 (36-100)||(34466906-34466970)


Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 23596780 - 23596537
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23596780 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 23596681  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23596680 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 23596581  T
Q  218 aaaagttccaccaccaagatcgaaaataagaacgttcttctcac 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23596580 aaaagttccaccaccaagatcgaaaataagaacgttcttctcac 23596537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 23587928 - 23587685
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23587928 ctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggt 23587829  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  23587828 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttgacctcaaagataccttcctcaatagtaagtagggaaacatc 23587729  T
Q  218 aaaagttccaccaccaagatcgaaaataagaacgttcttctcac 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23587728 aaaagttccaccaccaagatcgaaaataagaacgttcttctcac 23587685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 54396396 - 54396633
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    |||||||||||||||||||| ||||| || || || | ||| |||| ||| ||||||||||| |||||||| |||||| | || ||   ||||||||| |    
T  54396396 ctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgat 54396495  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 217  Q
    ||||||| |||||||||||||||||||| || | ||| ||||||||||| ||||||||||| || ||||| ||||| |||||||||||||| ||||||||    
T  54396496 tcaccattctgttatcaaaatcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatc 54396595  T
Q  218 aaaagttccaccaccaagatcgaaaataagaacgttct 255  Q
     ||||||||||| || |  || |||||||| |||||||    
T  54396596 gaaagttccacctcccaagtcaaaaataagcacgttct 54396633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 35132595 - 35132644
Alignment:
Q  192 tcctcaatagtaagaagtgaaacatcaaaagttccaccaccaagatcgaa 241  Q
    |||| ||||||||| | ||||||||||||||| |||||||||||||||||    
T  35132595 tccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaa 35132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 8102640 - 8102883
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    ||||| ||||||||||| || |||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || |||||||||||||||     
T  8102640 ctcttcgctctctcacatgcggttctcaatctcctaagtgccctagggtttccgctaatatccttcttgttcttcctcttaaactcttgaacaaaatggg 8102739  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 217  Q
    | ||||| |||||||||||||||||||| || | ||| |||||||| || ||||| || || ||||| ||||| || ||||||||||||||||| |||||    
T  8102740 taaccattctgttatcaaaatcttcaccaccaagatgggtatcacctgcagtagccttaacttcaaatataccctcttcaatagtaagaagtgacacatc 8102839  T
Q  218 aaaagttccaccaccaagatcgaaaataagaacgttcttctcac 261  Q
    |||||| |||||||| | ||| || || |  |||||||||||||    
T  8102840 aaaagtaccaccacccaaatcaaagatcaacacgttcttctcac 8102883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 229
Target Start/End: Complemental strand, 8017608 - 8017397
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    ||||| |||||||||||||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || || ||||||||||| |    
T  8017608 ctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccactaatatccttcttgttcttcctcttaaactcctgaacaaaatgat 8017509  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 217  Q
    | ||||| ||||| |||||||||||||| || | ||| ||||||||||| ||||| || || ||||| ||||| || |||||||||||||| || |||||    
T  8017508 taaccattctgttgtcaaaatcttcaccaccaagatgggtatcaccagcagtagccttaacttcaaaaataccctcttcaatagtaagaagagacacatc 8017409  T
Q  218 aaaagttccacc 229  Q
    |||||| |||||    
T  8017408 aaaagtaccacc 8017397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 39985619 - 39985836
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    ||||| ||||| ||||||||||| |||||||| |||||||| || || || ||||| || || ||||| ||||| |||||||| ||||||||||| ||||    
T  39985619 ctcttcgctctttcacaagcagtcctcaacctcctaagagctctggggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggt 39985718  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 217  Q
    ||||||| ||||| |||||||| |||||||| | ||| || || || ||||| |||||||||||||||||||| || |||||||| || |  || |||||    
T  39985719 tcaccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagcaaagagacatc 39985818  T
Q  218 aaaagttccaccaccaag 235  Q
    |||||| |||||||||||    
T  39985819 aaaagtaccaccaccaag 39985836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 8383062 - 8382851
Alignment:
Q  27 ctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcc 126  Q
    ||||| ||||| ||||| ||||||||||||||| |||| || |||||||| || || |||| |||||||||||| || | |||||| |  ||||| || |    
T  8383062 ctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaacaaagtacttcacgattc 8382963  T
Q  127 tgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttcc 226  Q
    ||||||| || ||||||||||| | ||| || || || || || || |||||  |||||| |   | || ||| || || || || ||||||||||||||    
T  8382962 tgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgaggagagacacatcaaaagttcc 8382863  T
Q  227 accaccaagatc 238  Q
    ||||||||||||    
T  8382862 accaccaagatc 8382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 8581679 - 8581805
Alignment:
Q  24 gctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcacca 123  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||||||| |||| || |  ||||  || |||||||| ||    ||||| || |||||||    
T  8581679 gctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgacacaaagtgattcacca 8581778  T
Q  124 tcctgttatcaaaatcttcacctccca 150  Q
    | ||||||||||||||||| |||||||    
T  8581779 ttctgttatcaaaatcttcccctccca 8581805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 7877925 - 7877810
Alignment:
Q  21 ttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttca 120  Q
    ||||| |||||||| |||||||||||||| ||||| ||||| || ||||||| ||| ||    |||||||||||||| || ||    || ||||||||||    
T  7877925 ttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaatggttca 7877826  T
Q  121 ccatcctgttatcaaa 136  Q
     ||| |||||||||||    
T  7877825 acattctgttatcaaa 7877810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 8602133 - 8602167
Alignment:
Q  204 agaagtgaaacatcaaaagttccaccaccaagatc 238  Q
    ||||| |||||||||||||||||||||||||||||    
T  8602133 agaagagaaacatcaaaagttccaccaccaagatc 8602167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 8609890 - 8609954
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatcttt 82  Q
    ||||| || |||||||||||||| |||||||| ||||||||||| |  || ||||| ||||||||    
T  8609890 ctctttgccctctcacaagcagtcctcaacctcctaagagccctcgagttcccactgatatcttt 8609954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 17716882 - 17716665
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    ||||| || |||||||||||||| ||||||||  ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||| ||||||| ||||    
T  17716882 ctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaacaaagtggt 17716783  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatc 217  Q
    ||||||| ||||||| |||||| |||||||| | ||| |  || || ||||||||||| |||| |||| |||  || |||||||| || |  || |||||    
T  17716782 tcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagttagcaaagagacatc 17716683  T
Q  218 aaaagttccaccaccaag 235  Q
    |||||| |||||||||||    
T  17716682 aaaagtaccaccaccaag 17716665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 17718146 - 17717926
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    ||||| || |||||||||||||| |||||| |  ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||||||||||| ||||    
T  17718146 ctcttcgccctctcacaagcagtcctcaacttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaacaaagtggt 17718047  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagta---agaagtgaaac 214  Q
    ||||||| ||||||| |||||| |||||||| | ||| |  || || ||||||||||| |||| |||| |||  || |||||||||   || |  || ||    
T  17718046 tcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagtagttagcaaagagac 17717947  T
Q  215 atcaaaagttccaccaccaag 235  Q
    ||||||||| |||||||||||    
T  17717946 atcaaaagtaccaccaccaag 17717926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 17622130 - 17622010
Alignment:
Q  28 tctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcct 127  Q
    ||||||||||||| ||||||||  ||||||| ||||| || ||||| || || ||||| ||||| |||||||| ||||||||||| ||||||||||| ||    
T  17622130 tctcacaagcagtcctcaacctcataagagctcttgggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggttcaccattct 17622031  T
Q  128 gttatcaaaatcttcacctcc 148  Q
    ||||| |||||| ||||||||    
T  17622030 gttattaaaatcctcacctcc 17622010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 17648226 - 17648106
Alignment:
Q  28 tctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcct 127  Q
    ||||||||||||| ||||||||  ||||||| ||||| || |||||||| || ||||| ||||| ||||||||  |||||||||| || |||||||| ||    
T  17648226 tctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaacacttgaacaaagtgattcaccattct 17648127  T
Q  128 gttatcaaaatcttcacctcc 148  Q
    ||||| |||||| ||||||||    
T  17648126 gttattaaaatcctcacctcc 17648106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 17666878 - 17666694
Alignment:
Q  18 ctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggt 117  Q
    ||||| || |||||||||||||| | ||||||  ||||||| ||||| || ||||| || || || || ||||| || ||||| ||||||||||| || |    
T  17666878 ctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaacaaagtgat 17666779  T
Q  118 tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagt 202  Q
    ||||||| ||||||| |||||| |||||||| | ||| |  || || | ||||||||| ||| ||| |||||| || ||||||||    
T  17666778 tcaccattctgttattaaaatcctcacctccaagatgggggtctccggttgtagctttaaccccaatgataccctcttcaatagt 17666694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 17705923 - 17705803
Alignment:
Q  28 tctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcct 127  Q
    ||||||||||||| ||| |||   ||||||| | ||| || |||||||| || ||||| ||||| |||||||| |||| |||||| ||||||||||| ||    
T  17705923 tctcacaagcagtcctcgaccacataagagctcatgggttgccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattct 17705824  T
Q  128 gttatcaaaatcttcacctcc 148  Q
    ||||| |||||| ||||||||    
T  17705823 gttattaaaatcctcacctcc 17705803  T

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Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 17704240 - 17704120
Alignment:
Q  28 tctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcct 127  Q
    ||||||||||||| ||||||||  ||||||| ||| | |  ||||| || || ||| | ||||| |||||||| ||||||||||| | ||||||||| ||    
T  17704240 tctcacaagcagtcctcaacctcataagagctctttggtcgccactgatgtccttcctgttctttctcttgaactcttgaacaaagtagttcaccattct 17704141  T
Q  128 gttatcaaaatcttcacctcc 148  Q
    ||||| |||||| ||||||||    
T  17704140 gttattaaaatcctcacctcc 17704120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 11209371 - 11209471
Alignment:
Q  24 gctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcacca 123  Q
    |||||||| ||||||||  ||| ||| ||||| || ||||||||||||||||| ||  | || | |||||||  ||| ||||  ||||||||||||||||    
T  11209371 gctctctcgcaagcagtcttcagcctcctaagggctcttggatttccactaatgtccattttttccttcctcaagaactctttcacaaaatggttcacca 11209470  T
Q  124 t 124  Q
    |    
T  11209471 t 11209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 34466970 - 34466906
Alignment:
Q  36 gcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaa 100  Q
    |||||||||||||| || | ||| || || |||||||||||||| || |||| ||||||||||||    
T  34466970 gcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaa 34466906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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