View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9980_low_45 (Length: 236)
Name: NF9980_low_45
Description: NF9980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9980_low_45 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 12833590 - 12833368
Alignment:
| Q |
1 |
tattcaatgggaaaaagaattagtttattacgttaatttgacaaagatgaatatctgaatagaaggtttcgattgttcaaaatttcagagaaaacacgta |
100 |
Q |
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| T |
12833590 |
tattcaatgggaaaaagaattagtttattactttaatttgacaaagatgaatatctgaatagaaggtttcgattgttcaaaatttcagagaaaacacata |
12833491 |
T |
|
| Q |
101 |
cttttaaggtgatgtgagttttatatccaaaatgattcaaatgagtttttgaatataattgccaacacaatgttcttgatttatggatttggtgcgattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12833490 |
cttttaaggtgatgtgagttttatatccaaaatgactcaaatgagtttttgaatataattgccaacacaatgttcttgatttatggatttggtgcgattt |
12833391 |
T |
|
| Q |
201 |
tatatgaaagtgaaccatcaacc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
12833390 |
tatatgaaagtgaaccatcaacc |
12833368 |
T |
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