View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9980_low_47 (Length: 223)

Name: NF9980_low_47
Description: NF9980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9980_low_47
NF9980_low_47
[»] chr6 (26 HSPs)
chr6 (1-216)||(27683565-27683780)
chr6 (1-216)||(27690886-27691101)
chr6 (1-216)||(17354951-17355166)
chr6 (1-216)||(13142656-13142872)
chr6 (1-105)||(22013550-22013654)
chr6 (1-105)||(27526820-27526924)
chr6 (1-105)||(9814393-9814497)
chr6 (1-105)||(25478773-25478877)
chr6 (1-105)||(33062602-33062706)
chr6 (7-105)||(28040279-28040377)
chr6 (1-105)||(27650627-27650734)
chr6 (1-54)||(9814566-9814619)
chr6 (1-54)||(17355235-17355288)
chr6 (1-54)||(33055270-33055323)
chr6 (1-54)||(22013723-22013775)
chr6 (1-54)||(27526993-27527045)
chr6 (1-54)||(27683849-27683901)
chr6 (1-54)||(27691168-27691220)
chr6 (1-54)||(13142535-13142588)
chr6 (1-54)||(15970764-15970817)
chr6 (1-54)||(28040453-28040505)
chr6 (9-54)||(30129978-30130023)
chr6 (1-54)||(33055392-33055444)
chr6 (1-54)||(33062775-33062827)
chr6 (1-54)||(25478648-25478704)
chr6 (1-54)||(6952031-6952084)
[»] chr2 (24 HSPs)
chr2 (1-216)||(31713414-31713627)
chr2 (1-103)||(39155168-39155270)
chr2 (1-105)||(44323658-44323762)
chr2 (1-105)||(809179-809283)
chr2 (1-105)||(4405483-4405587)
chr2 (1-105)||(10415426-10415530)
chr2 (1-105)||(45331580-45331684)
chr2 (1-106)||(2587734-2587839)
chr2 (1-107)||(9311812-9311918)
chr2 (1-98)||(4696212-4696309)
chr2 (12-74)||(15001247-15001309)
chr2 (1-54)||(10415599-10415652)
chr2 (1-54)||(9311425-9311479)
chr2 (1-54)||(809058-809110)
chr2 (1-54)||(2587908-2587960)
chr2 (1-50)||(4405660-4405709)
chr2 (1-54)||(31713696-31713748)
chr2 (1-54)||(39155047-39155099)
chr2 (1-54)||(44323831-44323883)
chr2 (1-54)||(9311558-9311612)
chr2 (1-54)||(4696377-4696430)
chr2 (4-50)||(26894820-26894866)
chr2 (4-50)||(26900259-26900305)
chr2 (1-54)||(45331753-45331805)
[»] chr5 (8 HSPs)
chr5 (1-105)||(42785069-42785173)
chr5 (1-105)||(5519982-5520086)
chr5 (1-105)||(27198818-27198922)
chr5 (1-105)||(15598168-15598272)
chr5 (1-51)||(15598344-15598394)
chr5 (1-54)||(27198698-27198751)
chr5 (1-54)||(5519861-5519913)
chr5 (1-54)||(42785242-42785294)
[»] chr7 (11 HSPs)
chr7 (1-105)||(44060538-44060642)
chr7 (1-105)||(28803140-28803244)
chr7 (1-105)||(36264898-36265002)
chr7 (4-107)||(22010813-22010914)
chr7 (1-54)||(44060416-44060469)
chr7 (1-54)||(28803313-28803365)
chr7 (1-54)||(36264619-36264672)
chr7 (1-57)||(36264777-36264832)
chr7 (1-107)||(30943790-30943894)
chr7 (87-207)||(6023045-6023164)
chr7 (142-199)||(36265369-36265425)
[»] chr1 (17 HSPs)
chr1 (1-105)||(17653904-17654008)
chr1 (1-105)||(14649854-14649958)
chr1 (1-105)||(14659644-14659748)
chr1 (1-105)||(29289537-29289641)
chr1 (1-106)||(47051025-47051130)
chr1 (1-105)||(16100324-16100428)
chr1 (1-105)||(17479268-17479372)
chr1 (3-105)||(10991686-10991788)
chr1 (1-54)||(17479107-17479160)
chr1 (1-54)||(14650026-14650078)
chr1 (1-54)||(14659817-14659869)
chr1 (1-54)||(16100497-16100549)
chr1 (1-54)||(17653783-17653835)
chr1 (1-54)||(47050904-47050956)
chr1 (1-54)||(29289417-29289468)
chr1 (1-53)||(10991562-10991614)
chr1 (1-72)||(34900469-34900540)
[»] chr4 (16 HSPs)
chr4 (1-103)||(27561667-27561769)
chr4 (1-105)||(4764005-4764109)
chr4 (1-105)||(51533243-51533345)
chr4 (1-105)||(18694677-18694779)
chr4 (1-105)||(11513268-11513372)
chr4 (1-107)||(27734231-27734335)
chr4 (20-104)||(54352366-54352450)
chr4 (1-54)||(5358992-5359045)
chr4 (1-54)||(27734109-27734162)
chr4 (1-57)||(4763884-4763939)
chr4 (1-54)||(27561546-27561598)
chr4 (1-54)||(18694557-18694609)
chr4 (1-54)||(54352236-54352288)
chr4 (1-54)||(11513145-11513198)
chr4 (1-50)||(51533417-51533465)
chr4 (1-54)||(27733948-27734001)
[»] chr3 (15 HSPs)
chr3 (1-106)||(19434585-19434690)
chr3 (1-105)||(6911842-6911946)
chr3 (1-105)||(28058961-28059065)
chr3 (1-105)||(28069386-28069490)
chr3 (1-105)||(28103395-28103499)
chr3 (1-216)||(9436688-9436902)
chr3 (1-105)||(5706049-5706151)
chr3 (1-105)||(11200272-11200376)
chr3 (1-54)||(19434759-19434811)
chr3 (1-54)||(28058840-28058892)
chr3 (1-54)||(28069265-28069317)
chr3 (1-54)||(6911721-6911773)
chr3 (1-54)||(5705929-5705981)
chr3 (1-54)||(28103568-28103620)
chr3 (10-54)||(17958738-17958782)
[»] chr8 (11 HSPs)
chr8 (1-105)||(4707160-4707264)
chr8 (1-105)||(18982000-18982104)
chr8 (1-105)||(26917798-26917902)
chr8 (1-105)||(15924517-15924621)
chr8 (1-105)||(26340987-26341091)
chr8 (1-54)||(4707039-4707091)
chr8 (1-54)||(18982173-18982225)
chr8 (1-54)||(15924690-15924742)
chr8 (1-54)||(26917676-26917729)
chr8 (12-54)||(26340875-26340917)
chr8 (1-98)||(15256924-15257020)
[»] scaffold0713 (2 HSPs)
scaffold0713 (1-105)||(368-472)
scaffold0713 (1-54)||(541-593)
[»] scaffold0406 (2 HSPs)
scaffold0406 (1-105)||(3234-3338)
scaffold0406 (1-54)||(3407-3459)
[»] scaffold0438 (4 HSPs)
scaffold0438 (1-105)||(8167-8271)
scaffold0438 (1-105)||(11148-11252)
scaffold0438 (1-54)||(8044-8097)
scaffold0438 (12-54)||(11036-11078)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-105)||(60063-60166)
scaffold0007 (1-54)||(60236-60289)
scaffold0007 (1-54)||(60399-60452)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-104)||(413410-413513)
scaffold0002 (1-105)||(424792-424896)
scaffold0002 (1-72)||(407360-407431)


Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 27683780 - 27683565
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27683780 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 27683681  T
Q  101 tcgtcataaacataatcatttttctcgaacacataggtttaaaaaccatgattttgtataacatcaaacttgtgtcaaacgtacacaatcaaattccaat 200  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  27683680 tcgtcataatgataatcatttttctcgaacacataggtttaaaaaccatgattttgtaaaacatcaaacttgtgtcaaacgtacacaatcaaatttcaat 27683581  T
Q  201 tggcaatcctatgctt 216  Q
    | |||||||| |||||    
T  27683580 ttgcaatcctttgctt 27683565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 27691101 - 27690886
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27691101 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 27691002  T
Q  101 tcgtcataaacataatcatttttctcgaacacataggtttaaaaaccatgattttgtataacatcaaacttgtgtcaaacgtacacaatcaaattccaat 200  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  27691001 tcgtcataatgataatcatttttctcgaacacataggtttaaaaaccatgattttgtaaaacatcaaacttgtgtcaaacgtacacaatcaaatttcaat 27690902  T
Q  201 tggcaatcctatgctt 216  Q
    | |||||||| |||||    
T  27690901 ttgcaatcctttgctt 27690886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 17355166 - 17354951
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  17355166 ttgatagccctctcctcctaatggtggcctttccattggggcggctccatctaacggagtaactctgcctaattgaaaacacatactaggtgcacctagg 17355067  T
Q  101 tcgtcataaacataatcatttttctcgaacacataggtttaaaaaccatgattttgtataacatcaaacttgtgtcaaacgtacacaatcaaattccaat 200  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||    
T  17355066 tcgtcataatgataatcgtttttctcgaacacataggtttaaaaaccatgattctgtaaaatatcaaacttgtgtcaaacgtacacaatcaaattccaat 17354967  T
Q  201 tggcaatcctatgctt 216  Q
    | |||||||| |||||    
T  17354966 ttgcaatcctttgctt 17354951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13142656 - 13142872
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||  |||||||||||||||||||||    
T  13142656 ttgatagtcgtctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactatccctacttgaattcacatactaggtgcacctagg 13142755  T
Q  101 tcgtcataaacataatcatttttctcgaacacataggttt-aaaaaccatgattttgtataacatcaaacttgtgtcaaacgtacacaatcaaattccaa 199  Q
    |||||| ||  |||||| ||||||||||||||| |||||| |||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||||    
T  13142756 tcgtcacaatgataatcgtttttctcgaacacagaggtttaaaaaaccatgattttgtaaaatatcaaacttgtgtcatacgtacacaatcaaatcccaa 13142855  T
Q  200 ttggcaatcctatgctt 216  Q
    || |||| ||| |||||    
T  13142856 tttgcaaacctttgctt 13142872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22013654 - 22013550
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22013654 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaatcacatactaggtgcacctagg 22013555  T
Q  101 tcgtc 105  Q
    |||||    
T  22013554 tcgtc 22013550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27526924 - 27526820
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  27526924 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcatctagg 27526825  T
Q  101 tcgtc 105  Q
    |||||    
T  27526824 tcgtc 27526820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9814497 - 9814393
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||  |||| |||||||||||||||||||||    
T  9814497 ttgatagccctctcctcctaatggtggcctttccataggggcggctccatctaatggggtaattctacctaaccgaaatcacatactaggtgcacctagg 9814398  T
Q  101 tcgtc 105  Q
    |||||    
T  9814397 tcgtc 9814393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 25478773 - 25478877
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  25478773 ttgatagccatctcctcctaatgaaggcctttccataggggcggctccatctaacggggtaaatctacctaattgaaatcacatactaggtgcacctagg 25478872  T
Q  101 tcgtc 105  Q
    |||||    
T  25478873 tcgtc 25478877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33062706 - 33062602
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  33062706 ttgatagccttctcctcctaatgacggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcaactagg 33062607  T
Q  101 tcgtc 105  Q
    |||||    
T  33062606 tcgtc 33062602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 28040377 - 28040279
Alignment:
Q  7 gccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctaggtcgtc 105  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  28040377 gccctcccctcctaatggcggcctttccataggggcggctccatctatcggggtaattctacctaattgaaatcacatactaggtgcacctagatcgtc 28040279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27650734 - 27650627
Alignment:
Q  1 ttgatagccctctcctcctaatggc---ggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacct 97  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  27650734 ttgatagccctctcctcctaatggtactggcctttccataggggcggctccgtctaatggagtaactctacctaaccgaaatcacatactaggtgcacct 27650635  T
Q  98 aggtcgtc 105  Q
    ||||||||    
T  27650634 aggtcgtc 27650627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9814619 - 9814566
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9814619 ttgatagccctctcctcctaatggtggcctttccataggggcggctccatctaa 9814566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17355288 - 17355235
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  17355288 ttgatagcccgctcctcctaatggtggcctttccataggggcggctccatctaa 17355235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33055323 - 33055270
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  33055323 ttgatagccctttcctcctaatggcggcccttccataggggcggctccatctaa 33055270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22013775 - 22013723
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  22013775 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 22013723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27527045 - 27526993
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  27527045 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 27526993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27683901 - 27683849
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  27683901 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 27683849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27691220 - 27691168
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  27691220 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 27691168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13142535 - 13142588
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| || |||||||  |||||||||||||||||    
T  13142535 ttgatagccctctcctcctaatggtggtctttccaatggggcggctccatctaa 13142588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15970764 - 15970817
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  15970764 ttgatagccctctcctcctaatggtggtctttccatagggctggctccatctaa 15970817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28040505 - 28040453
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  28040505 ttgatagccctttcctcctaatggtggcctttccat-ggggcggctccatctaa 28040453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 30130023 - 30129978
Alignment:
Q  9 cctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  30130023 cctctcctcctaatggtggcctttccataggggtggctccatctaa 30129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33055444 - 33055392
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  33055444 ttgatagccctctcctcccaatggtggcctttccat-ggggcggctccatctaa 33055392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33062827 - 33062775
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  33062827 ttgatagccctctcctcccaatggtggcctttccat-ggggcggctccatctaa 33062775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25478648 - 25478704
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccata---ggggcggctccatctaa 54  Q
    ||||||||||||||| |||||||| ||||||||| ||   |||||||||||||||||    
T  25478648 ttgatagccctctccacctaatggtggcctttccgtacatggggcggctccatctaa 25478704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6952084 - 6952031
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||||||||||| |||||  ||||||||||||| |||| ||||| ||||    
T  6952084 ttgatagccctctcctcataatgatggcctttccatagaggcgactccagctaa 6952031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 31713627 - 31713414
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31713627 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 31713528  T
Q  101 tcgtcataaacataatcatttttctcgaacacataggtttaaaaaccatgattttgtataacatcaaacttgtgtcaaacgtacacaatcaaattccaat 200  Q
    |||||||||  |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31713527 tcgtcataatgataatcatttttctcgaacac--aggtttaaaaaccatgattttgtaaaacatcaaacttgtgtcaaacgtacacaatcaaattccaat 31713430  T
Q  201 tggcaatcctatgctt 216  Q
    | |||||||| |||||    
T  31713429 ttgcaatcctttgctt 31713414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39155168 - 39155270
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39155168 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 39155267  T
Q  101 tcg 103  Q
    |||    
T  39155268 tcg 39155270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 44323762 - 44323658
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44323762 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaatcacatactaggtgcacctagg 44323663  T
Q  101 tcgtc 105  Q
    |||||    
T  44323662 tcgtc 44323658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 809179 - 809283
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  809179 ttgatagccctctcctcctaatggcagcctttccataggggcggctccatctaatggggtaactctacctaattgaaatcacatactaggtgcacctagg 809278  T
Q  101 tcgtc 105  Q
    |||||    
T  809279 tcgtc 809283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4405587 - 4405483
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  4405587 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaactctacctaattgaaatcacatactaggtgcacctagg 4405488  T
Q  101 tcgtc 105  Q
    |||||    
T  4405487 tcgtc 4405483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 10415530 - 10415426
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  10415530 ttgatagccctctcctcctaatggcggcctttccataggggtggctccatctaacggagtaactctacctaattgaaatcacatactaggtgcacctagg 10415431  T
Q  101 tcgtc 105  Q
    |||||    
T  10415430 tcgtc 10415426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 45331684 - 45331580
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  45331684 ttgatagccctctcctcctaatggaggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 45331585  T
Q  101 tcgtc 105  Q
    |||||    
T  45331584 tcgtc 45331580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2587839 - 2587734
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||    
T  2587839 ttgatagccctctccttctaatggcggcctttccataggggcggctccatctaacagggtaattctacctaattgaaatcacatactaggtgcacctagg 2587740  T
Q  101 tcgtca 106  Q
    ||||||    
T  2587739 tcgtca 2587734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9311812 - 9311918
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||| |||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  9311812 ttgatagctctctcctcctaatggatgcctttccattggggcggctccatctaatggagtaactctacctaatcgaaatcacatactaggtgcacctagg 9311911  T
Q  101 tcgtcat 107  Q
    |||||||    
T  9311912 tcgtcat 9311918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4696309 - 4696212
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcaccta 98  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||||||||    
T  4696309 ttgatagccctctcctcctaatgacggcctttccataggggcggctccatctaacggggtaactatacctaattgaattcacatactaggtgcaccta 4696212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 15001247 - 15001309
Alignment:
Q  12 ctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaatt 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  15001247 ctcctcctaatggcggcctttccataggggcggctccatctaacggagtaactctacctaatt 15001309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10415652 - 10415599
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  10415652 ttgatagccctcttctcctaatggtggcctttccataggggcggctccatctaa 10415599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9311425 - 9311479
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcc-tttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  9311425 ttgatagccctctcctcctaatggtggccttttccataggggcggctccatctaa 9311479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 809058 - 809110
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  809058 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 809110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2587960 - 2587908
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  2587960 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 2587908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4405709 - 4405660
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccat 50  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  4405709 ttgatagccctctcctcctaatggtggccttcccataggggcggctccat 4405660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31713748 - 31713696
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  31713748 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 31713696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39155047 - 39155099
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  39155047 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 39155099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44323883 - 44323831
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  44323883 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 44323831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9311558 - 9311612
Alignment:
Q  1 ttgatagccctctcctcctaatggcggccttt-ccataggggcggctccatctaa 54  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  9311558 ttgatagccctttcctcctaatggtggccttttccataggggcggctccatctaa 9311612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4696430 - 4696377
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||||| |||||||||||| | |||||||||| ||||||||||||||||    
T  4696430 ttgatagccctatcctcctaatggtgtcctttccatatgggcggctccatctaa 4696377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 26894820 - 26894866
Alignment:
Q  4 atagccctctcctcctaatggcggcctttccataggggcggctccat 50  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||    
T  26894820 atagccctctcctcctaatggtggcctttccaatggggcggctccat 26894866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 26900259 - 26900305
Alignment:
Q  4 atagccctctcctcctaatggcggcctttccataggggcggctccat 50  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||    
T  26900259 atagccctctcctcctaatggtggcctttccaatggggcggctccat 26900305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45331805 - 45331753
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||    
T  45331805 ttgatagccctctcctcctaatggtggcatttccat-ggggcgactccatctaa 45331753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 42785173 - 42785069
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42785173 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaatcacatactaggtgcacctagg 42785074  T
Q  101 tcgtc 105  Q
    |||||    
T  42785073 tcgtc 42785069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5519982 - 5520086
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  5519982 ttgatagccctctcctcctaatggtggcctttccataggggcggctccatctaatggagtaactctacctaatcgaaatcacatactaggtgcacctagg 5520081  T
Q  101 tcgtc 105  Q
    |||||    
T  5520082 tcgtc 5520086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27198818 - 27198922
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  27198818 ttgatagccctctcctcctaatgacggtctttccataggggcggcttcatctaacggggtaactatacctaattgaaatcacatactaggtgcacctagg 27198917  T
Q  101 tcgtc 105  Q
    |||||    
T  27198918 tcgtc 27198922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15598272 - 15598168
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| ||||||| || |||||||| |||| |||||| ||| |||||||||||||||||    
T  15598272 ttgatagccctctcctcctaatggcagtctttccattggggcggctacatctaacggagtaactcttcctatttgaaatcacgtactaggtgcacctagg 15598173  T
Q  101 tcgtc 105  Q
    |||||    
T  15598172 tcgtc 15598168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15598394 - 15598344
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatc 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15598394 ttgatagccctctcctcctaatggtggcctttccataggggcggctccatc 15598344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27198698 - 27198751
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  27198698 ttgatagccctctcctcctaatggtgccctttccataggggcggctccatctaa 27198751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5519861 - 5519913
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  5519861 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 5519913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42785294 - 42785242
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  42785294 ttgatagtcctctcctcctaatggtggcctttccat-ggggcggctccatctaa 42785242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44060538 - 44060642
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  44060538 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaagtctacctaattgaaatcacatactaggtgcacctagg 44060637  T
Q  101 tcgtc 105  Q
    |||||    
T  44060638 tcgtc 44060642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 28803244 - 28803140
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  28803244 ttgatagccctctcctcctaatggcggcttttccataggggcggctccatctaacggggtaactctacctaattgaaatcacatactaggtgcacctagg 28803145  T
Q  101 tcgtc 105  Q
    |||||    
T  28803144 tcgtc 28803140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36264898 - 36265002
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  36264898 ttgatagcactctcctcctaatggcggcctttccataggggcggctctatctaacggggtaactctacctaattgaaatcacatactaggtgaacctagg 36264997  T
Q  101 tcgtc 105  Q
    |||||    
T  36264998 tcgtc 36265002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 22010914 - 22010813
Alignment:
Q  4 atagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctaggtcg 103  Q
    |||| |||||||||| | ||| |||||||||||||||||||||||||||||| | |||||||| |||||| |||| ||||||||||||||||||||||||    
T  22010914 ataggcctctcctccaactggtggcctttccataggggcggctccatctaat-gagtaactct-cctaatcgaaatcacatactaggtgcacctaggtcg 22010817  T
Q  104 tcat 107  Q
    ||||    
T  22010816 tcat 22010813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44060416 - 44060469
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44060416 ttgatagccctctcctcctaatggtggcctttccataggggcggctccatctaa 44060469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28803365 - 28803313
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  28803365 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 28803313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36264619 - 36264672
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  36264619 ttgatagccctctcctcctaatggtgacctttccataggagcggctccatctaa 36264672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36264777 - 36264832
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatgg 57  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||    
T  36264777 ttgatagccctctcctcctaatggtgacctt-ccataggggcggctccatctaatgg 36264832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30943894 - 30943790
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||| || ||||||| ||||||||| ||||||||| |||||||| ||| |||  ||||||||||| |||||||  | |||||||||| |||| ||| |    
T  30943894 ttgataaccatctcctcttaatggcggtctttccata-gggcggcttcatttaa-cgggtaactctatctaattgtgatcacatactagatgcaactaag 30943797  T
Q  101 tcgtcat 107  Q
    || ||||    
T  30943796 tcatcat 30943790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 6023045 - 6023164
Alignment:
Q  87 taggtgcacctaggtcgtcataaacataatcatttttctcgaa-cacataggtttaaaaaccatgattttgtataacatcaaacttgtgtcaaacgtaca 185  Q
    ||||||||||||||| |||| ||  |||||| | |||||| || ||||||  ||||||| |||| |||  ||| || ||||||||||| ||||| | |||    
T  6023045 taggtgcacctaggtagtcacaattataatcgtatttctcaaaacacatatctttaaaa-ccataattc-gtaaaatatcaaacttgtatcaaatgcaca 6023142  T
Q  186 caatcaaattccaattggcaat 207  Q
    |||||||||||||||| |||||    
T  6023143 caatcaaattccaatttgcaat 6023164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 36265369 - 36265425
Alignment:
Q  142 aaaaccatgattttgtataacatcaaacttgtgtcaaacgtacacaatcaaattccaa 199  Q
    ||||||||||||| ||| || ||||||||||||||||| | |||||||||||| ||||    
T  36265369 aaaaccatgattt-gtaaaatatcaaacttgtgtcaaatgcacacaatcaaatcccaa 36265425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17653904 - 17654008
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  17653904 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaattctacctaattgaaatcacatactaggtgcacctagg 17654003  T
Q  101 tcgtc 105  Q
    |||||    
T  17654004 tcgtc 17654008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 14649958 - 14649854
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  14649958 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 14649859  T
Q  101 tcgtc 105  Q
    |||||    
T  14649858 tcgtc 14649854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 14659748 - 14659644
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  14659748 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 14659649  T
Q  101 tcgtc 105  Q
    |||||    
T  14659648 tcgtc 14659644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 29289537 - 29289641
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  29289537 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 29289636  T
Q  101 tcgtc 105  Q
    |||||    
T  29289637 tcgtc 29289641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47051025 - 47051130
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||    
T  47051025 ttgatagccctctcctcctaatggaggcctttccataggggcggctccatctaacggggtaattctacctaattaaaatcacatactaggtgcacctagg 47051124  T
Q  101 tcgtca 106  Q
    ||||||    
T  47051125 tcgtca 47051130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 16100428 - 16100324
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||| ||||||| |||||||||||||||||||||    
T  16100428 ttgatagccctctcctcctaatggcagcctttccataggggcggctccatccaacggggtaattctacctgattgaaatcacatactaggtgcacctagg 16100329  T
Q  101 tcgtc 105  Q
    |||||    
T  16100328 tcgtc 16100324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17479268 - 17479372
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  17479268 ttgatagccctctcctcctaatggtggcttttccattggggcggctccatctaacggggtaactatacctaattgaaatcacatactaggtgcacctagg 17479367  T
Q  101 tcgtc 105  Q
    |||||    
T  17479368 tcgtc 17479372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 10991686 - 10991788
Alignment:
Q  3 gatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctaggtc 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||| ||| | |||||||||||||||| ||||||    
T  10991686 gatagccctctcctcctaatggtggcctttccataggggcggctccacctaacggagtaactctacctaactgatatcacatactaggtgcacttaggtc 10991785  T
Q  103 gtc 105  Q
    |||    
T  10991786 gtc 10991788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17479107 - 17479160
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  17479107 ttgatagccctctcctcctaatggtggtctttccataggggcggctccatctaa 17479160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14650078 - 14650026
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  14650078 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 14650026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14659869 - 14659817
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  14659869 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 14659817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16100549 - 16100497
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  16100549 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 16100497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17653783 - 17653835
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  17653783 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 17653835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47050904 - 47050956
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  47050904 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 47050956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29289417 - 29289468
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  29289417 ttgatagccctctcct-ctaatggtggcctttccat-ggggcggctccatctaa 29289468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10991562 - 10991614
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatcta 53  Q
    ||||||| | |||||||||||||  |||||||||||||||||||||| |||||    
T  10991562 ttgatagtcttctcctcctaatgatggcctttccataggggcggctcaatcta 10991614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 34900540 - 34900469
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaa 72  Q
    ||||||||| |||||||||| ||||||||||| ||||  || |||| ||||||| || ||||| ||||||||    
T  34900540 ttgatagccttctcctcctattggcggccttttcataacggtggcttcatctaacggagtaacgctacctaa 34900469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27561667 - 27561769
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27561667 ttgatagccccctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaatcacatactaggtgcacctagg 27561766  T
Q  101 tcg 103  Q
    |||    
T  27561767 tcg 27561769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4764005 - 4764109
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| |||||||    
T  4764005 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgtacctagg 4764104  T
Q  101 tcgtc 105  Q
    |||||    
T  4764105 tcgtc 4764109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 51533345 - 51533243
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||| |||| |||||||||||||||||||||    
T  51533345 ttgatagccctctcctcctaatggcggcctttccattggggcggctccatctaatggagtaa--ctacctaatcgaaatcacatactaggtgcacctagg 51533248  T
Q  101 tcgtc 105  Q
    |||||    
T  51533247 tcgtc 51533243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18694677 - 18694779
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||  ||||||||| |||| |||||||||||||||||||||    
T  18694677 ttgatagccctctcctcctaatggcggcctttccattggggtggctccatctaatggagtaa--ctacctaatcgaaatcacatactaggtgcacctagg 18694774  T
Q  101 tcgtc 105  Q
    |||||    
T  18694775 tcgtc 18694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 11513268 - 11513372
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||| ||||| || |||||||||||||| ||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||    
T  11513268 ttgatagccctctccttctaatagcagcctttccatagggtcggctccatctaacggaataactctacctaattgaaatcacatactaggtgcacctagg 11513367  T
Q  101 tcgtc 105  Q
    |||||    
T  11513368 tcgtc 11513372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27734231 - 27734335
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||| || ||||  ||| |||||||||| |||||||||| ||||||| ||    
T  27734231 ttgatagccctctcctcctaatggcaacctttccataggggcggctccatctaacggagtaa--ctatctaattgaaatcacatactagatgcacctggg 27734328  T
Q  101 tcgtcat 107  Q
    |||||||    
T  27734329 tcgtcat 27734335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 54352366 - 54352450
Alignment:
Q  20 aatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctaggtcgt 104  Q
    |||||| |||||||||| ||||| ||| |||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||    
T  54352366 aatggcagcctttccattggggcagcttcatctaatggagtaactctacctaatcgaaatcacatactatgtgcacctaggtcgt 54352450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5358992 - 5359045
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  5358992 ttgatagtcctctcctcctaatggtggcctttccataggggcggctccatctaa 5359045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27734109 - 27734162
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  27734109 ttgatagccctctcctcctaatggtggcctttccataggggcagctccatctaa 27734162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4763884 - 4763939
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatgg 57  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4763884 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaatgg 4763939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27561546 - 27561598
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  27561546 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 27561598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18694557 - 18694609
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  18694557 ttgatagccctctcctcctaatggtggccttcccat-ggggcggctccatctaa 18694609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54352236 - 54352288
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  54352236 ttgatagccctctcctcctaatggtggccttcccat-ggggcggctccatctaa 54352288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11513145 - 11513198
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||| ||||||| |  ||||||||||    
T  11513145 ttgatagccctctcctcctaatggtggccttttcatagggacaactccatctaa 11513198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51533465 - 51533417
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccat 50  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  51533465 ttgatagccctctcctcctaatggtggccttcccat-ggggcggctccat 51533417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27733948 - 27734001
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||| |||||||||||||| ||| ||||||||||||  ||| |||||||    
T  27733948 ttgatagccgtctcctcctaatggtggcttttccataggggaagcttcatctaa 27734001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19434690 - 19434585
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||     
T  19434690 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaattctacctaattgaaatcacatactaggtgcacctaga 19434591  T
Q  101 tcgtca 106  Q
    ||||||    
T  19434590 tcgtca 19434585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 6911842 - 6911946
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  6911842 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 6911941  T
Q  101 tcgtc 105  Q
    |||||    
T  6911942 tcgtc 6911946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28058961 - 28059065
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  28058961 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaatcagatactaggtgctcctagg 28059060  T
Q  101 tcgtc 105  Q
    |||||    
T  28059061 tcgtc 28059065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28069386 - 28069490
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  28069386 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaatcagatactaggtgctcctagg 28069485  T
Q  101 tcgtc 105  Q
    |||||    
T  28069486 tcgtc 28069490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 28103499 - 28103395
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  28103499 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 28103400  T
Q  101 tcgtc 105  Q
    |||||    
T  28103399 tcgtc 28103395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 9436688 - 9436902
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||| |||||  ||||| ||||||||||  |||||||||| || ||||||||||||||  |||| |||||||||||||||||||||    
T  9436688 ttgatagccctctcctcccaatggtagccttcccataggggcaactccatctaacggagtaactctacctaaccgaaatcacatactaggtgcacctagg 9436787  T
Q  101 tcgtcataaacataatcatttttctc-gaacacataggtttaaaaaccatgattttgtataacatcaaacttgtgtcaaacgtacacaatcaaattccaa 199  Q
    |||||| ||  |||||| | ||||||  ||||||||| ||| ||||||||||  | ||| || ||||||||||||||||| | |||||||||||| ||||    
T  9436788 tcgtcacaattataatcgtatttctcaaaacacatagcttt-aaaaccatga-ctcgtaaaatatcaaacttgtgtcaaatgcacacaatcaaatcccaa 9436885  T
Q  200 ttggcaatcctatgctt 216  Q
    || ||||| || |||||    
T  9436886 tttgcaattctttgctt 9436902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5706049 - 5706151
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||| |||  |||||||||||||||||||||    
T  5706049 ttgatagccctctcctcctaatggcggcctttccattggggcggctccatctaatggagtaa--ctacctaatcgaagtcacatactaggtgcacctagg 5706146  T
Q  101 tcgtc 105  Q
    |||||    
T  5706147 tcgtc 5706151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11200376 - 11200272
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||| |||||||||||||||||| | |||||||||||||||   | |||||||||  |||||||||||||| ||||| ||||||||||||||||||||     
T  11200376 ttgatggccctctcctcctaatggtgacctttccataggggcattttcatctaatgcagtaactctacctaactgaaatcacatactaggtgcacctagt 11200277  T
Q  101 tcgtc 105  Q
    |||||    
T  11200276 tcgtc 11200272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19434811 - 19434759
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  19434811 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 19434759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28058840 - 28058892
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  28058840 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 28058892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28069265 - 28069317
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  28069265 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 28069317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6911721 - 6911773
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  6911721 ttgatagccatctcctcctaatggtggcctttccat-ggggcggctccatctaa 6911773  T

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Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5705929 - 5705981
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| |||||| | || |||||||||||||||||    
T  5705929 ttgatagccctctcctcctaatggtggccttcctat-ggggcggctccatctaa 5705981  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28103620 - 28103568
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||    
T  28103620 ttgatagccctctcctcctaatggtggcatttccat-ggggcgactccatctaa 28103568  T

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Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 17958738 - 17958782
Alignment:
Q  10 ctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||    
T  17958738 ctctcctcctaatggtggcctttccataggagcgactccatctaa 17958782  T

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Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4707160 - 4707264
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  4707160 ttgatagccctctcctcctaatggcggcctttccataggggtggctccatctaatggggtaactctacctaattgaaatcacatactaggtacacctagg 4707259  T
Q  101 tcgtc 105  Q
    |||||    
T  4707260 tcgtc 4707264  T

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Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18982104 - 18982000
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  18982104 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 18982005  T
Q  101 tcgtc 105  Q
    |||||    
T  18982004 tcgtc 18982000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26917798 - 26917902
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  26917798 ttgatagccctctcctcctaatggtggcctttccatcggggcggctccatccaacggggtaactctacctaattgaaatcacatactaggtgcacctagg 26917897  T
Q  101 tcgtc 105  Q
    |||||    
T  26917898 tcgtc 26917902  T

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Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15924621 - 15924517
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||  |||| |||||||||||||||||||||    
T  15924621 ttgatagccctctcctcctaatggtggcctttccatagtggcggctccatctaatggggtaattctacctaaccgaaatcacatactaggtgcacctagg 15924522  T
Q  101 tcgtc 105  Q
    |||||    
T  15924521 tcgtc 15924517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26340987 - 26341091
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||   ||| ||||||||||||||||  |||    
T  26340987 ttgatagccctttcctcctaatggcggcctttccataggggcggctccatttaacggagtaactctacctaaccaaaatcacatactaggtgcacacagg 26341086  T
Q  101 tcgtc 105  Q
    |||||    
T  26341087 tcgtc 26341091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4707039 - 4707091
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  4707039 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 4707091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18982225 - 18982173
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  18982225 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 18982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15924742 - 15924690
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  15924742 ttgatagccctctcctcctaatggtggcctttccat-ggggtggctccatctaa 15924690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26917676 - 26917729
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||    
T  26917676 ttgatagcactctcttcctaatggtggcctttccataggggcgactccatctaa 26917729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 26340875 - 26340917
Alignment:
Q  12 ctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  26340875 ctcctccaaatggtggcctttccataggggcggctccatctaa 26340917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 15257020 - 15256924
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcaccta 98  Q
    |||||| |||| |||||||||||||||||||| | |||||| || ||||||||||  ||||||||| ||| || | ||  ||||||||||| ||||||    
T  15257020 ttgatatccctttcctcctaatggcggccttttcttaggggtggatccatctaat-aggtaactctccctgatcgtaatgacatactaggtacaccta 15256924  T

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Target: scaffold0713 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 472 - 368
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| |||||||    
T  472 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaattctgcctaattgaaatcacatactaggtgtacctagg 373  T
Q  101 tcgtc 105  Q
    |||||    
T  372 tcgtc 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 593 - 541
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  593 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3338 - 3234
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  3338 ttgatagccctctcctcctaatggtggcctttccataggggcggctccatctaacggggtaattctacctaattgaaatcacatactaggtgcacctagg 3239  T
Q  101 tcgtc 105  Q
    |||||    
T  3238 tcgtc 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3459 - 3407
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3459 ttgatagccctctcctcctaatggtggcctttccat-ggggcggctccatctaa 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 77; Significance: 7e-36; HSPs: 4)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8167 - 8271
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||   ||| |||||||||||||||||||||    
T  8167 ttgatagccctctcctcctaatggcggcctttccataggggcggctccgtctaacggagtaactctacctaaccaaaatcacatactaggtgcacctagg 8266  T
Q  101 tcgtc 105  Q
    |||||    
T  8267 tcgtc 8271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 11148 - 11252
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||   ||| ||||||||||||||||  |||    
T  11148 ttgatagccctttcctcctaatggcggcctttccataggggcggctccatttaacggagtaactctacctaaccaaaatcacatactaggtgcacacagg 11247  T
Q  101 tcgtc 105  Q
    |||||    
T  11248 tcgtc 11252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8044 - 8097
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  8044 ttgatagccctctcctccaaatggtggcctttccataggggcggctccatctaa 8097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 11036 - 11078
Alignment:
Q  12 ctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  11036 ctcctccaaatggtggcctttccataggggcggctccatctaa 11078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 60166 - 60063
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||||||    
T  60166 ttgatagccctctcctcctaatggtggccttcccataggggcggctccatctaat-gggtaactctccctaatcgaaatcacatactaggtgcacctagg 60068  T
Q  101 tcgtc 105  Q
    |||||    
T  60067 tcgtc 60063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 60289 - 60236
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  60289 ttgatagccctctcctcctaatggtggcctttccataggggcggctccatctaa 60236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 60452 - 60399
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaa 54  Q
    ||||||||||||||||||||| || |||||| ||||| ||||||||||||||||    
T  60452 ttgatagccctctcctcctaaaggtggccttcccataagggcggctccatctaa 60399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 413410 - 413513
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||   ||| || ||||||||||  ||||||    
T  413410 ttgatagccctctcctcctaatggcggtctttccataggggcggctccatctaacggaataactctacctaaccaaaatcaaatactaggtgtgcctagg 413509  T
Q  101 tcgt 104  Q
    ||||    
T  413510 tcgt 413513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 424792 - 424896
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaattgaaaacacatactaggtgcacctagg 100  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||  ||  |||||||||||||  |||| || ||||||| ||  ||||||    
T  424792 ttgatagctctctccacctaatggcggcctttccataggggcggctccatctatcggaataactctacctaaccgaaatcaaatactagatgtgcctagg 424891  T
Q  101 tcgtc 105  Q
    |||||    
T  424892 tcgtc 424896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 407360 - 407431
Alignment:
Q  1 ttgatagccctctcctcctaatggcggcctttccataggggcggctccatctaatggggtaactctacctaa 72  Q
    |||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||  |||||||||||||    
T  407360 ttgatagctctctccacctaatggcggcctttccataggggcggtttcatctattggaataactctacctaa 407431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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