View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9980_low_49 (Length: 220)

Name: NF9980_low_49
Description: NF9980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9980_low_49
NF9980_low_49
[»] chr6 (41 HSPs)
chr6 (1-220)||(27629928-27630147)
chr6 (1-220)||(27272802-27273021)
chr6 (68-186)||(28162485-28162603)
chr6 (39-199)||(4525085-4525245)
chr6 (47-191)||(20160508-20160652)
chr6 (47-191)||(22172179-22172323)
chr6 (68-186)||(13522323-13522441)
chr6 (104-174)||(29501267-29501337)
chr6 (68-186)||(33374506-33374624)
chr6 (104-157)||(27007573-27007626)
chr6 (38-198)||(22477514-22477674)
chr6 (104-199)||(27044251-27044346)
chr6 (68-186)||(8892560-8892678)
chr6 (104-157)||(4546066-4546119)
chr6 (104-157)||(4724425-4724478)
chr6 (104-157)||(17025123-17025176)
chr6 (104-157)||(26777909-26777962)
chr6 (104-157)||(28207303-28207356)
chr6 (104-156)||(16944310-16944362)
chr6 (104-156)||(27484978-27485030)
chr6 (39-199)||(29549274-29549434)
chr6 (104-156)||(29572874-29572926)
chr6 (104-144)||(34463656-34463696)
chr6 (47-157)||(4757565-4757675)
chr6 (68-186)||(8903795-8903913)
chr6 (98-200)||(22935116-22935218)
chr6 (98-200)||(23857561-23857663)
chr6 (107-157)||(30558298-30558348)
chr6 (104-157)||(4772858-4772911)
chr6 (47-200)||(24304857-24305010)
chr6 (104-157)||(26116701-26116754)
chr6 (47-200)||(26918184-26918337)
chr6 (104-157)||(27360292-27360345)
chr6 (104-157)||(27450635-27450688)
chr6 (104-144)||(3695924-3695964)
chr6 (104-144)||(16673988-16674028)
chr6 (104-200)||(26999934-27000030)
chr6 (98-200)||(13299190-13299292)
chr6 (98-200)||(15424556-15424658)
chr6 (104-200)||(16749715-16749811)
chr6 (104-200)||(26988862-26988958)
[»] chr4 (23 HSPs)
chr4 (47-187)||(15227695-15227835)
chr4 (47-186)||(1900082-1900221)
chr4 (49-199)||(24112489-24112639)
chr4 (49-199)||(34189254-34189404)
chr4 (68-186)||(24460912-24461030)
chr4 (47-200)||(14664840-14664993)
chr4 (47-195)||(15285226-15285374)
chr4 (104-200)||(21969580-21969676)
chr4 (104-156)||(40105978-40106030)
chr4 (104-199)||(14763601-14763696)
chr4 (104-199)||(36344809-36344904)
chr4 (104-199)||(54833269-54833364)
chr4 (107-157)||(14098423-14098473)
chr4 (98-200)||(17013873-17013975)
chr4 (39-157)||(19373075-19373193)
chr4 (107-157)||(31126857-31126907)
chr4 (104-200)||(5005749-5005845)
chr4 (104-200)||(6569732-6569828)
chr4 (104-200)||(27163613-27163709)
chr4 (104-144)||(39850502-39850542)
chr4 (104-157)||(18800961-18801014)
chr4 (47-200)||(24592607-24592760)
chr4 (104-144)||(33674162-33674202)
[»] scaffold2173 (1 HSPs)
scaffold2173 (161-220)||(1-60)
[»] chr2 (35 HSPs)
chr2 (47-220)||(21703426-21703599)
chr2 (68-186)||(31891624-31891742)
chr2 (68-186)||(3784481-3784599)
chr2 (68-186)||(34156838-34156956)
chr2 (68-185)||(34303600-34303717)
chr2 (104-200)||(27777067-27777163)
chr2 (104-200)||(27816834-27816930)
chr2 (104-200)||(37925353-37925449)
chr2 (68-186)||(16163426-16163544)
chr2 (68-186)||(27118515-27118633)
chr2 (47-200)||(27434729-27434882)
chr2 (104-157)||(39889922-39889975)
chr2 (104-200)||(261050-261146)
chr2 (104-144)||(9350335-9350375)
chr2 (104-144)||(12586661-12586701)
chr2 (104-156)||(19416828-19416880)
chr2 (104-156)||(22926357-22926409)
chr2 (104-144)||(27803552-27803592)
chr2 (104-156)||(31876141-31876193)
chr2 (104-156)||(34861540-34861592)
chr2 (104-156)||(37686238-37686290)
chr2 (104-156)||(37701503-37701555)
chr2 (107-157)||(16829666-16829716)
chr2 (107-157)||(16891765-16891815)
chr2 (104-200)||(11635474-11635570)
chr2 (104-200)||(11641663-11641759)
chr2 (104-200)||(32049658-32049754)
chr2 (104-200)||(34279309-34279405)
chr2 (104-144)||(39052169-39052209)
chr2 (104-144)||(40233359-40233399)
chr2 (98-200)||(23128851-23128953)
chr2 (104-174)||(37375021-37375091)
chr2 (104-157)||(12716933-12716986)
chr2 (104-200)||(13936829-13936925)
chr2 (104-200)||(28882074-28882170)
[»] scaffold0336 (1 HSPs)
scaffold0336 (104-199)||(8096-8191)
[»] scaffold0124 (2 HSPs)
scaffold0124 (47-186)||(20219-20358)
scaffold0124 (98-200)||(30311-30413)
[»] chr5 (46 HSPs)
chr5 (47-186)||(22888289-22888428)
chr5 (68-186)||(11325634-11325752)
chr5 (68-186)||(13184852-13184970)
chr5 (68-186)||(13440698-13440816)
chr5 (49-199)||(33292346-33292496)
chr5 (68-186)||(33877087-33877205)
chr5 (47-195)||(23892022-23892170)
chr5 (104-200)||(31431301-31431397)
chr5 (1-176)||(25198802-25198977)
chr5 (98-200)||(24969891-24969993)
chr5 (104-174)||(32599688-32599758)
chr5 (104-157)||(6874175-6874228)
chr5 (104-157)||(28960034-28960087)
chr5 (107-200)||(30168345-30168438)
chr5 (104-157)||(34616394-34616447)
chr5 (104-157)||(37358891-37358944)
chr5 (104-157)||(37671728-37671781)
chr5 (104-156)||(2510924-2510976)
chr5 (104-200)||(3789399-3789495)
chr5 (104-156)||(5637783-5637835)
chr5 (104-156)||(9317324-9317376)
chr5 (104-200)||(9548736-9548832)
chr5 (104-156)||(12132028-12132080)
chr5 (104-200)||(15658953-15659049)
chr5 (104-156)||(15759094-15759146)
chr5 (104-200)||(18500941-18501037)
chr5 (104-156)||(26480265-26480317)
chr5 (104-156)||(29967303-29967355)
chr5 (104-156)||(30029288-30029340)
chr5 (104-156)||(30151891-30151943)
chr5 (104-156)||(31826656-31826708)
chr5 (104-156)||(37754841-37754893)
chr5 (104-156)||(37771236-37771288)
chr5 (104-200)||(43078122-43078218)
chr5 (107-157)||(18375648-18375698)
chr5 (107-157)||(33516232-33516282)
chr5 (104-157)||(13325080-13325133)
chr5 (104-144)||(40473801-40473841)
chr5 (104-200)||(41674582-41674678)
chr5 (104-157)||(24681310-24681363)
chr5 (104-157)||(24723837-24723890)
chr5 (104-157)||(28649099-28649152)
chr5 (47-200)||(33777303-33777456)
chr5 (104-200)||(23718181-23718277)
chr5 (104-200)||(23752643-23752739)
chr5 (104-200)||(30934509-30934605)
[»] chr8 (17 HSPs)
chr8 (68-186)||(44562932-44563050)
chr8 (68-186)||(9354453-9354571)
chr8 (68-186)||(19659305-19659423)
chr8 (104-157)||(3329817-3329870)
chr8 (104-200)||(18710450-18710546)
chr8 (104-199)||(31354388-31354483)
chr8 (104-157)||(12093031-12093084)
chr8 (47-200)||(16283256-16283409)
chr8 (104-157)||(29829177-29829230)
chr8 (107-200)||(31490005-31490098)
chr8 (104-156)||(19208659-19208711)
chr8 (104-156)||(28362254-28362306)
chr8 (104-156)||(33258587-33258639)
chr8 (104-199)||(19286329-19286424)
chr8 (98-200)||(16277412-16277514)
chr8 (104-157)||(19518441-19518494)
chr8 (104-200)||(19674302-19674398)
[»] chr3 (47 HSPs)
chr3 (49-199)||(32438927-32439077)
chr3 (39-200)||(22871211-22871372)
chr3 (39-200)||(22886270-22886431)
chr3 (47-195)||(16626845-16626993)
chr3 (49-199)||(4892983-4893133)
chr3 (104-174)||(5596729-5596799)
chr3 (68-186)||(17994132-17994250)
chr3 (68-185)||(4625736-4625853)
chr3 (47-199)||(8211509-8211661)
chr3 (104-200)||(29149092-29149188)
chr3 (104-200)||(36997426-36997522)
chr3 (104-200)||(47023278-47023374)
chr3 (104-199)||(4347022-4347117)
chr3 (104-199)||(28021103-28021198)
chr3 (104-157)||(6542854-6542907)
chr3 (104-156)||(5013537-5013589)
chr3 (39-199)||(5466745-5466905)
chr3 (92-200)||(8301601-8301709)
chr3 (104-200)||(11110698-11110794)
chr3 (104-144)||(20577255-20577295)
chr3 (47-199)||(22387913-22388065)
chr3 (104-156)||(24327984-24328036)
chr3 (104-156)||(28339127-28339179)
chr3 (104-200)||(29665322-29665418)
chr3 (104-156)||(31964854-31964906)
chr3 (104-156)||(50134452-50134504)
chr3 (105-156)||(5609703-5609754)
chr3 (104-199)||(18277390-18277485)
chr3 (104-199)||(18292691-18292786)
chr3 (104-199)||(18307992-18308087)
chr3 (68-186)||(5652179-5652297)
chr3 (107-157)||(17985336-17985386)
chr3 (104-157)||(4416741-4416794)
chr3 (107-156)||(18225019-18225068)
chr3 (104-200)||(4796990-4797086)
chr3 (104-200)||(7073037-7073133)
chr3 (104-200)||(7996387-7996483)
chr3 (104-200)||(10642895-10642991)
chr3 (104-144)||(18242552-18242592)
chr3 (38-186)||(18530156-18530304)
chr3 (104-200)||(28116294-28116390)
chr3 (104-144)||(48465740-48465780)
chr3 (104-144)||(51781836-51781876)
chr3 (104-144)||(51796925-51796965)
chr3 (98-200)||(15893043-15893145)
chr3 (47-200)||(4721399-4721552)
chr3 (47-200)||(35880534-35880687)
[»] chr7 (30 HSPs)
chr7 (47-180)||(16041134-16041267)
chr7 (47-199)||(5159330-5159482)
chr7 (50-178)||(16450199-16450327)
chr7 (68-186)||(31088657-31088775)
chr7 (68-186)||(45733292-45733410)
chr7 (47-200)||(16503562-16503715)
chr7 (47-200)||(16518598-16518751)
chr7 (104-199)||(4145306-4145401)
chr7 (47-200)||(5127800-5127953)
chr7 (104-200)||(5147522-5147618)
chr7 (104-156)||(9618516-9618568)
chr7 (104-200)||(11441425-11441521)
chr7 (104-156)||(24592767-24592819)
chr7 (104-156)||(26275320-26275372)
chr7 (104-156)||(26320095-26320147)
chr7 (104-200)||(26435122-26435218)
chr7 (104-156)||(26670140-26670192)
chr7 (104-155)||(31124776-31124827)
chr7 (104-157)||(31564624-31564677)
chr7 (104-144)||(3445159-3445199)
chr7 (104-200)||(11424958-11425054)
chr7 (104-144)||(26485982-26486022)
chr7 (104-144)||(26538111-26538151)
chr7 (104-200)||(2154438-2154534)
chr7 (104-200)||(10917047-10917143)
chr7 (104-200)||(16736642-16736738)
chr7 (104-200)||(16751696-16751792)
chr7 (104-200)||(17523397-17523493)
chr7 (104-200)||(17529722-17529818)
chr7 (104-200)||(45387208-45387304)
[»] chr1 (5 HSPs)
chr1 (47-195)||(20460914-20461062)
chr1 (68-186)||(20340642-20340760)
chr1 (104-157)||(51638081-51638134)
chr1 (104-156)||(10962533-10962585)
chr1 (104-156)||(28584844-28584896)
[»] scaffold0260 (1 HSPs)
scaffold0260 (68-186)||(2965-3083)
[»] scaffold0089 (2 HSPs)
scaffold0089 (47-200)||(29570-29723)
scaffold0089 (98-200)||(40365-40467)
[»] scaffold0038 (1 HSPs)
scaffold0038 (104-157)||(7801-7854)
[»] scaffold0496 (1 HSPs)
scaffold0496 (104-156)||(73-125)
[»] scaffold0350 (1 HSPs)
scaffold0350 (104-156)||(7579-7631)
[»] scaffold0159 (2 HSPs)
scaffold0159 (104-156)||(9406-9458)
scaffold0159 (104-156)||(19879-19931)
[»] scaffold0237 (1 HSPs)
scaffold0237 (107-157)||(15269-15319)
[»] scaffold0029 (1 HSPs)
scaffold0029 (47-200)||(426-579)
[»] scaffold0144 (1 HSPs)
scaffold0144 (104-144)||(26554-26594)
[»] scaffold0415 (1 HSPs)
scaffold0415 (104-137)||(5853-5886)


Alignment Details
Target: chr6 (Bit Score: 176; Significance: 6e-95; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 27630147 - 27629928
Alignment:
Q  1 gaaggaaacagaggttggaatggtatcctctagagcaagtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctat 100  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| |    
T  27630147 gaaggaaacagaggttggaatggtatcctcgggagcaggtcagtctacggctactgtcgcccctgttaatgttgctcagctacctccaccatacccctgt 27630048  T
Q  101 gcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27630047 acaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgtgcaacaga 27629948  T
Q  201 atccacaacaaccaccagtt 220  Q
    | ||||||||||||||||||    
T  27629947 agccacaacaaccaccagtt 27629928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 27273021 - 27272802
Alignment:
Q  1 gaaggaaacagaggttggaatggtatcctctagagcaagtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctat 100  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27273021 gaaggaaacagaggttggaatggtatcctctggagcaggtcagactacagctactgtcgcccctgttaatgctgctcagctacctccaccatactcctat 27272922  T
Q  101 gcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | |||||||||||| |||||||||| ||| || |||||| || | |||||||||||||||||||||||||| ||||| |||||||||||||| || ||||    
T  27272921 gtaccgtattctcaacatccattctacccgccattttactattagtatcctttgccatcaggaccacctcaagtacctgtgaatgctattgtgcagcaga 27272822  T
Q  201 atccacaacaaccaccagtt 220  Q
    | ||||||||||||||||||    
T  27272821 agccacaacaaccaccagtt 27272802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 28162485 - 28162603
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||| | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||    
T  28162485 aatgctgctcagctacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 28162584  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  28162585 ctcaggtacccgttaatgc 28162603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 4525085 - 4525245
Alignment:
Q  39 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttta 138  Q
    |||| |||||||||||||| || ||| | ||||| |||||  | |||||  ||||| | |||   ||||||||||||||||| |||||||||||||||||    
T  4525085 gtcaatctatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtttta 4525184  T
Q  139 ccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
     ||||| |||||||||||| |||| | ||||||||| || || ||||| || | |||||||    
T  4525185 tcatcagtatcctttgccaccaggccaacctcaggttcctgtcaatgccatcgctcaacag 4525245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 20160508 - 20160652
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| ||||||||||||||| ||||  ||||||||||||||   | |||||  || ||||| ||||| ||||  ||||| ||||||||||| |    
T  20160508 atggctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccattttaccatcagt 20160607  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattg 191  Q
    ||||| | ||| | || | ||||||||||||||| ||||| ||||    
T  20160608 atcctctaccaccgggtcaacctcaggtacccgttaatgccattg 20160652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 22172323 - 22172179
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| ||||||||||||||| ||||  ||||||||||||||   | |||||  || ||||| ||||| ||||  ||||| ||||||||||| |    
T  22172323 atggctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccattttaccatcagt 22172224  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattg 191  Q
    ||||| | ||| | || | ||||||||||||||| ||||| ||||    
T  22172223 atcctctaccaccgggtcaacctcaggtacccgttaatgccattg 22172179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 13522441 - 13522323
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  13522441 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13522342  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  13522341 ctcaggtacccgttaatgc 13522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 29501267 - 29501337
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 174  Q
    ||||||||||||||||||||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  29501267 ccgtattctcagcatccattcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 29501337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 33374624 - 33374506
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  33374624 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33374525  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  33374524 ctcaggtacccgttaatgc 33374506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 27007573 - 27007626
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  27007573 ccgtattctcagcatccattcttcccaccgttttatcatcagtaccctttgcca 27007626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 22477674 - 22477514
Alignment:
Q  38 agtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttt 137  Q
    ||||| || ||||||||||| |||||  |||||||||| ||  ||||||   | ||| | ||||| | ||| ||||||||||| ||||| ||||| || |    
T  22477674 agtcaatccatggctactgttgccccaattaatgctgcccaattacctctgtcgtacccgtatgcgcagtactctcagcatcccttctttccaccattct 22477575  T
Q  138 accatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaaca 198  Q
    | ||| | |||||||||||||| || | ||||||||||||||| ||||| |||| ||||||    
T  22477574 atcattagtatcctttgccatcgggtcaacctcaggtacccgttaatgcaattgctcaaca 22477514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 27044251 - 27044346
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  27044251 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 27044346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 8892678 - 8892560
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  8892678 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtattctttgccatcgggtcaac 8892579  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  8892578 ctcaggtacccgttaatgc 8892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 4546119 - 4546066
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  4546119 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 4546066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 4724478 - 4724425
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  4724478 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 4724425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 17025123 - 17025176
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  17025123 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 17025176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 26777962 - 26777909
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  26777962 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctttgcca 26777909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 28207303 - 28207356
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  28207303 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 28207356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 16944362 - 16944310
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  16944362 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 16944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 27484978 - 27485030
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  27484978 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 27485030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 29549274 - 29549434
Alignment:
Q  39 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttta 138  Q
    |||| ||||||||||| || || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||| ||||||||||| |||||||||||||||||    
T  29549274 gtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccaccgtttta 29549373  T
Q  139 ccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
     ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  29549374 tcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 29549434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 29572874 - 29572926
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  29572874 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29572926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 34463696 - 34463656
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  34463696 ccgtattctcagcatcctttcttcccaccgttttaccatca 34463656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 4757565 - 4757675
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    |||||||||||||| ||| | ||||| |||||  | |||||  ||||| | |||   ||||||||||| ||||| ||||||||||||||||| ||||| |    
T  4757565 atggctactgtcgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcaacatccgttcttcccaccgttttatcatcagt 4757664  T
Q  147 atcctttgcca 157  Q
    | |||||||||    
T  4757665 accctttgcca 4757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 8903913 - 8903795
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||  ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  8903913 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatctcttctttccaccattctatcatcagtattctttgccatcgggtcaac 8903814  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  8903813 ctcaggtacccgttaatgc 8903795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 22935218 - 22935116
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||| ||||| ||||| || || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| |||| |||||    
T  22935218 tatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaattgctcaac 22935119  T
Q  198 aga 200  Q
    |||    
T  22935118 aga 22935116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 23857663 - 23857561
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||| ||||| ||||| || || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| |||| |||||    
T  23857663 tatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaattgctcaac 23857564  T
Q  198 aga 200  Q
    |||    
T  23857563 aga 23857561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 30558348 - 30558298
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  30558348 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 30558298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 4772858 - 4772911
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  4772858 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 4772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 24305010 - 24304857
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    |||||||||||||| ||| | |||||||| ||  | |||||  ||||| | ||||  ||||||||||||||||| ||||| || || ||||| ||||| |    
T  24305010 atggctactgtcgctcctatcaatgctgcccaaatgcctccgtcatacccatatgtgccgtattctcagcatcccttctttccgccattttatcatcagt 24304911  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  24304910 accctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 24304857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 26116754 - 26116701
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||| | ||||||||||||||||| ||||| || |||||||||    
T  26116754 ccgtattctcagcattcgttcttcccaccgttttatcatcagtaccctttgcca 26116701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 26918184 - 26918337
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||||||||||||||| ||||| || || ||||| ||||| |    
T  26918184 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagt 26918283  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  26918284 accctctgccaccgggtcaacctcaagtacccgtcaatgcaattgctcaacaga 26918337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 27360345 - 27360292
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  27360345 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27360292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 27450688 - 27450635
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  27450688 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27450635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 3695924 - 3695964
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  3695924 ccgtattctcagcatcctttcttcccaccgttttatcatca 3695964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 16673988 - 16674028
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  16673988 ccgtactctcagcatccgttcttcccaccgttttaccatca 16674028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 26999934 - 27000030
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  26999934 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacaga 27000030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 13299292 - 13299190
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | |||||    
T  13299292 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 13299193  T
Q  198 aga 200  Q
    |||    
T  13299192 aga 13299190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 15424658 - 15424556
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | |||||    
T  15424658 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 15424559  T
Q  198 aga 200  Q
    |||    
T  15424558 aga 15424556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 16749715 - 16749811
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  16749715 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 16749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 26988862 - 26988958
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  26988862 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 26988958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 15227695 - 15227835
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || |||||||    
T  15227695 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcaat 15227794  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgct 187  Q
    ||||||||||||| || | ||||||||||||||| ||||||    
T  15227795 atcctttgccatcgggtcaacctcaggtacccgttaatgct 15227835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 1900082 - 1900221
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || || ||||||||||| ||||| ||||| || || ||||| |    
T  1900082 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 1900181  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgc 186  Q
    ||||||||||||| || | ||||||||||||||| |||||    
T  1900182 atcctttgccatcgggtcaacctcaggtacccgttaatgc 1900221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 24112489 - 24112639
Alignment:
Q  49 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatat 148  Q
    ||||||||| || ||||| |||||||||||| | || ||  | ||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||     
T  24112489 ggctactgttgctcctgtcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 24112588  T
Q  149 cctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  24112589 cctttgccaccgggccaacctcaggtccctgtcaatgccatcgctcaacag 24112639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 199
Target Start/End: Complemental strand, 34189404 - 34189254
Alignment:
Q  49 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatat 148  Q
    |||||||||||| ||| | |||||||||||| | || ||  | ||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||     
T  34189404 ggctactgtcgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 34189305  T
Q  149 cctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  34189304 cctttgccaccgggccaacctcaggtccctgtcaatgccatcgctcaacag 34189254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 24461030 - 24460912
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  24461030 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 24460931  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  24460930 ctcaggtacccgttaatgc 24460912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 14664840 - 14664993
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | |||||||| ||  | |||||  ||||| | ||||||||||||||||||||||| ||||| || || ||||| ||||| |    
T  14664840 atggctactgttgctcctatcaatgctgcccaaatgcctccgtcatacccatatgcaccgtattctcagcatcctttctttccgccattttatcatcagt 14664939  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  14664940 accctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 14664993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 15285374 - 15285226
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| |||||||||| ||| ||||||||   ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |    
T  15285374 atggctactgttgcccctattaatgctgcccagttacctccattgtacccatatgcgcaatactctcagcatcctttctttccaccattctatcatcagt 15285275  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttca 195  Q
    ||||| | ||||| || | ||||||||| ||||| ||||| || |||||    
T  15285274 atcctctaccatcgggtcaacctcaggtgcccgttaatgccatcgttca 15285226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 21969580 - 21969676
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| |||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  21969580 ccgtattctcagcatcctttcttcccgccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 21969676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 40106030 - 40105978
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  40106030 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 40105978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 14763696 - 14763601
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  14763696 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 14763601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 36344904 - 36344809
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||| |||||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  36344904 ccgtactctcagcatccgttcttcctaccgttttatcatcagtatcctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 36344809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 54833269 - 54833364
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||| ||| | || | ||||||||| || || ||||| |||| |||||||    
T  54833269 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttaccaccgggccaacctcaggttcctgtcaatgccattgctcaacag 54833364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 14098423 - 14098473
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  14098423 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 14098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 17013873 - 17013975
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| |||| |||||    
T  17013873 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaac 17013972  T
Q  198 aga 200  Q
    |||    
T  17013973 aga 17013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 19373075 - 19373193
Alignment:
Q  39 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttta 138  Q
    |||| ||||||||||| || || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||| ||||||||||| |||||||||||||||||    
T  19373075 gtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccaccgtttta 19373174  T
Q  139 ccatcaatatcctttgcca 157  Q
     ||||| || |||||||||    
T  19373175 tcatcagtaccctttgcca 19373193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 31126907 - 31126857
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  31126907 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 31126857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 5005749 - 5005845
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  5005749 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacaga 5005845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 6569732 - 6569828
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  6569732 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgcccaacaga 6569828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 27163709 - 27163613
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  27163709 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 27163613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 39850502 - 39850542
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  39850502 ccgtactctcagcatccgttcttcccaccgttttaccatca 39850542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 18801014 - 18800961
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || |||||||||    
T  18801014 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 18800961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 24592760 - 24592607
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||||||||||||||| ||||| || || ||||| ||||| |    
T  24592760 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagt 24592661  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  24592660 accctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 24592607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 33674202 - 33674162
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| ||||||||||| |||||||||||    
T  33674202 ccgtactctcagcatccgttcttcccaccattttaccatca 33674162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2173 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold2173
Description:

Target: scaffold2173; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 1 - 60
Alignment:
Q  161 ggaccacctcaggtacccgtgaatgctattgttcaacagaatccacaacaaccaccagtt 220  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  1 ggaccacctcaggtacccgtgaatgctattgtgcaacagaagccacaacaaccaccagtt 60  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 220
Target Start/End: Complemental strand, 21703599 - 21703426
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| ||||||||||  || |||||||  | ||| | ||||| || || ||||||||||| ||||| ||||| || || ||||| |    
T  21703599 atggctactgttgcccctattaatgctgcctagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 21703500  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacagaatccacaacaaccaccagtt 220  Q
    ||||||||||||| || | ||||||||||||||| |||||  | |||||||| |  | |||||| |||||||||    
T  21703499 atcctttgccatcgggtcaacctcaggtacccgttaatgccgtcgttcaacaaatgcaacaacagccaccagtt 21703426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 31891742 - 31891624
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||    
T  31891742 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 31891643  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  31891642 ctcaggtacccgttaatgc 31891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 3784481 - 3784599
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  3784481 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 3784580  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  3784581 ctcaggtacccgttaatgc 3784599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 34156838 - 34156956
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  34156838 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34156937  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  34156938 ctcaggtacccgttaatgc 34156956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 34303717 - 34303600
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  34303717 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34303618  T
Q  168 ctcaggtacccgtgaatg 185  Q
    ||||||||||||| ||||    
T  34303617 ctcaggtacccgttaatg 34303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 27777067 - 27777163
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||  ||||| |||| | |||||| || ||||| ||||| ||||  |||||||    
T  27777067 ccgtattctcagcatcctttcttcccaccgttttaccatcagtaccccctgccaccaggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 27777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 27816834 - 27816930
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||  ||||| |||| | |||||| || ||||| ||||| ||||  |||||||    
T  27816834 ccgtattctcagcatcctttcttcccaccgttttaccatcagtaccccctgccaccaggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 27816930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 37925353 - 37925449
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  37925353 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattgcccaacaga 37925449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 16163426 - 16163544
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  16163426 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 16163525  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  16163526 ctcaggtacccgttaatgc 16163544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 27118515 - 27118633
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| |  |||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  27118515 aatgctgctcagctacctccgtcgtacccgcatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 27118614  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  27118615 ctcaggtacccgttaatgc 27118633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 27434882 - 27434729
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  | ||| | ||||| ||||| ||||||||||| ||||| ||||| || || ||||| |    
T  27434882 atggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttccaccattctatcatcagt 27434783  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||||||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  27434782 accctttgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacaga 27434729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 39889922 - 39889975
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  39889922 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 39889975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 261146 - 261050
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  261146 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 261050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 9350375 - 9350335
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  9350375 ccgtattctcagcatcctttcttcccaccgttttaccatca 9350335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 12586661 - 12586701
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  12586661 ccgtattctcagcatcctttcttcccaccgttttaccatca 12586701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19416880 - 19416828
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19416880 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19416828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22926409 - 22926357
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  22926409 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 22926357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 27803552 - 27803592
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27803552 ccgtattctcagcatcctttcttcccaccgttttaccatca 27803592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 31876141 - 31876193
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31876141 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31876193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 34861540 - 34861592
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  34861540 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 34861592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 37686290 - 37686238
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37686290 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37686238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 37701555 - 37701503
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37701555 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37701503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 16829716 - 16829666
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  16829716 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 16829666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 16891765 - 16891815
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  16891765 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 16891815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 11635570 - 11635474
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  11635570 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacaga 11635474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 11641759 - 11641663
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  11641759 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacaga 11641663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 32049658 - 32049754
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  32049658 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 32049754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 34279309 - 34279405
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  34279309 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 34279405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 39052209 - 39052169
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  39052209 ccgtactctcagcatccgttcttcccaccgttttaccatca 39052169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 40233359 - 40233399
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  40233359 ccgtactctcagcatccgttcttcccaccgttttaccatca 40233399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 23128953 - 23128851
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | |||||    
T  23128953 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 23128854  T
Q  198 aga 200  Q
    |||    
T  23128853 aga 23128851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 37375021 - 37375091
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 174  Q
    ||||| ||||||||||| |||||||| |||||||| ||||| || ||||||||| | || | |||||||||    
T  37375021 ccgtactctcagcatccgttcttcccgccgttttatcatcagtaccctttgccaccgggccaacctcaggt 37375091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 12716986 - 12716933
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || |||||||||    
T  12716986 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 12716933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 13936925 - 13936829
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  13936925 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 13936829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 28882074 - 28882170
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  28882074 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 28882170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 8096 - 8191
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| | ||||||||| || || ||||| || | |||||||    
T  8096 ccgtattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggttcctgtcaatgccatcgctcaacag 8191  T

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Target: scaffold0124 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 20219 - 20358
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || || ||||||||||| ||||| ||| | || || ||||| |    
T  20219 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccatcattctatcatcagt 20318  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgc 186  Q
    ||||||||||||| || | ||||||||||||||| |||||    
T  20319 atcctttgccatcgggtcaacctcaggtacccgttaatgc 20358  T

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Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 30311 - 30413
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | |||||    
T  30311 tatgcgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 30410  T
Q  198 aga 200  Q
    |||    
T  30411 aga 30413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 22888289 - 22888428
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || || ||||||||||| ||||| ||||| || || ||||| |    
T  22888289 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 22888388  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgc 186  Q
    ||||||||||||| || | |||||||||| |||| |||||    
T  22888389 atcctttgccatcgggtcaacctcaggtaaccgttaatgc 22888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 11325634 - 11325752
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||  |||| ||    
T  11325634 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccattgggacaac 11325733  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  11325734 ctcaggtacccgttaatgc 11325752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 13184970 - 13184852
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  13184970 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13184871  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  13184870 ctcaggtacccgttaatgc 13184852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 13440816 - 13440698
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  13440816 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13440717  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  13440716 ctcaggtacccgttaatgc 13440698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 33292346 - 33292496
Alignment:
Q  49 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatat 148  Q
    ||||||||| || ||| | |||||||||||| | || ||  | ||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||     
T  33292346 ggctactgttgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 33292445  T
Q  149 cctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  33292446 cctttgccaccgggccaacctcaggtccctgtcaatgccatcgctcaacag 33292496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 33877087 - 33877205
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  33877087 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33877186  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  33877187 ctcaggtacccgttaatgc 33877205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 23892022 - 23892170
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  | ||| | ||||| ||||| ||||||||||| ||||| ||| | || || ||||| |    
T  23892022 atggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttccaacattctatcatcagt 23892121  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttca 195  Q
    ||||||||||||| || | ||||||||||||||| ||||| || |||||    
T  23892122 atcctttgccatcgggtcaacctcaggtacccgtcaatgccatcgttca 23892170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 31431301 - 31431397
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  31431301 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacaga 31431397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25198802 - 25198977
Alignment:
Q  1 gaaggaaacagaggttggaatggtatcctctagagcaagtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctat 100  Q
    |||||||||||| || || ||||||||| |  ||||  |||| || ||||||||||| || ||| |||||||| | ||  | |||||  | ||| | |||    
T  25198802 gaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaattgcctccgtcgtacccatat 25198901  T
Q  101 gcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtac 176  Q
    || ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | |||||||||||    
T  25198902 gcgccgtactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtac 25198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 24969891 - 24969993
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| || || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| |||| |||||    
T  24969891 tatgcgccgtattctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgttaatgcaattgctcaac 24969990  T
Q  198 aga 200  Q
    |||    
T  24969991 aga 24969993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 32599758 - 32599688
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 174  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  32599758 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 32599688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 6874175 - 6874228
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  6874175 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 6874228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 28960087 - 28960034
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  28960087 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 28960034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 200
Target Start/End: Original strand, 30168345 - 30168438
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  30168345 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 30168438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 34616394 - 34616447
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  34616394 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 34616447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 37358944 - 37358891
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  37358944 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 37358891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 37671781 - 37671728
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  37671781 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 37671728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2510924 - 2510976
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  2510924 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 2510976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 3789399 - 3789495
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || |  |||||||| ||||| ||||| ||||  |||||||    
T  3789399 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccagcctcaggtgcccgtcaatgcaattgcccaacaga 3789495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5637783 - 5637835
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5637783 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 9317324 - 9317376
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9317324 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9317376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 9548832 - 9548736
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  9548832 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgctcaacaga 9548736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12132028 - 12132080
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  12132028 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 12132080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 15659049 - 15658953
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || |||||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  15659049 ccgtattctcagcatcctttctttccgccgttttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 15658953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15759146 - 15759094
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  15759146 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 15759094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 18501037 - 18500941
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  18501037 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 18500941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 26480265 - 26480317
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26480265 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26480317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 29967355 - 29967303
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  29967355 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 30029288 - 30029340
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  30029288 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 30029340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 30151891 - 30151943
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  30151891 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 30151943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 31826708 - 31826656
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31826708 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31826656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 37754841 - 37754893
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37754841 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37754893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 37771288 - 37771236
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37771288 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37771236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 43078122 - 43078218
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  43078122 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 43078218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 18375698 - 18375648
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  18375698 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 18375648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 33516232 - 33516282
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  33516232 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 33516282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 13325133 - 13325080
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  13325133 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 13325080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 40473841 - 40473801
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  40473841 ccgtactctcagcatccgttcttcccaccgttttaccatca 40473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 41674582 - 41674678
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    |||||| |||||||||| ||||| || || ||||||||||| || ||| ||||| | || |||||||| |||||||| ||||| ||||  |||||||    
T  41674582 ccgtatgctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtccacctcaagtacccgtcaatgcaattgcccaacaga 41674678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 24681310 - 24681363
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || |||||||||    
T  24681310 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 24681363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 24723837 - 24723890
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || |||||||||    
T  24723837 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 24723890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 28649099 - 28649152
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || |||||||||    
T  28649099 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 28649152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 33777303 - 33777456
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||||||||||||||| ||||| || || ||||| ||||| |    
T  33777303 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagt 33777402  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  33777403 accctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 33777456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 23718277 - 23718181
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  23718277 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 23718181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 23752739 - 23752643
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  23752739 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 23752643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 30934509 - 30934605
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  30934509 ccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 30934605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 44562932 - 44563050
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||    
T  44562932 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 44563031  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  44563032 ctcaggtacccgttaatgc 44563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 9354453 - 9354571
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  9354453 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 9354552  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  9354553 ctcaggtacccgttaatgc 9354571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 19659423 - 19659305
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  19659423 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 19659324  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  19659323 ctcaggtacccgttaatgc 19659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 3329870 - 3329817
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  3329870 ccgtattctcagcatccattcttcccaccgttttatcatcagtaccctttgcca 3329817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 18710450 - 18710546
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| ||||| |||||  ||| ||||||||    
T  18710450 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcccgtcaatgcagttgctcaacaga 18710546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 31354388 - 31354483
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  31354388 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 31354483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 12093084 - 12093031
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  12093084 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 12093031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 16283256 - 16283409
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  | ||| | ||||| ||||| ||||||||||| ||||| || || || || ||| | |    
T  16283256 atggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttccgccattctatcattagt 16283355  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||| |||| | ||||||||||||| | ||||| |||| ||||||||    
T  16283356 atcctttgccaccaggtcaacctcaggtacccattaatgcaattgctcaacaga 16283409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 29829177 - 29829230
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  29829177 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 29829230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 31490098 - 31490005
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  31490098 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattgcccaacaga 31490005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19208711 - 19208659
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19208711 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19208659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 28362306 - 28362254
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28362306 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28362254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 33258587 - 33258639
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  33258587 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 33258639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 19286329 - 19286424
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||| ||| | || | ||||||||| || || ||||| |||| |||||||    
T  19286329 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttaccaccgggccaacctcaggttcctgtcaatgccattgctcaacag 19286424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 16277412 - 16277514
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| || | |||||    
T  16277412 tatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaac 16277511  T
Q  198 aga 200  Q
    |||    
T  16277512 aga 16277514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 19518494 - 19518441
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || |||||||||    
T  19518494 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctttgcca 19518441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 19674302 - 19674398
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  19674302 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 19674398  T

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Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 32438927 - 32439077
Alignment:
Q  49 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatat 148  Q
    ||||||||| || ||||| |||||||||||| | || ||  | ||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||     
T  32438927 ggctactgttgctcctgtcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 32439026  T
Q  149 cctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  32439027 cctttgccaccgggccaacctcaggtccctgtcaatgccatcgctcaacag 32439077  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 22871372 - 22871211
Alignment:
Q  39 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttta 138  Q
    |||| |||||||||||||| || ||| | ||||| |||||| | |||||  ||||| | |||   ||||||||||||||||| |||||||||||||||||    
T  22871372 gtcaatctatggctactgttgcacctatcaatgcagctcagatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtttta 22871273  T
Q  139 ccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
     ||||| || ||||||||| |||| |  ||||| || ||||| ||||| ||||  |||||||    
T  22871272 tcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaatgcaattgcccaacaga 22871211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 22886431 - 22886270
Alignment:
Q  39 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttta 138  Q
    |||| |||||||||||||| || ||| | ||||| |||||| | |||||  ||||| | |||   ||||||||||||||||| |||||||||||||||||    
T  22886431 gtcaatctatggctactgttgcacctatcaatgcagctcagatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtttta 22886332  T
Q  139 ccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
     ||||| || ||||||||| |||| |  ||||| || ||||| ||||| ||||  |||||||    
T  22886331 tcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaatgcaattgcccaacaga 22886270  T

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Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 16626993 - 16626845
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | |||||||  || ||||||||||| ||||| |||||||| || ||||| |    
T  16626993 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcacaatactctcagcatcccttctttccaccgttctatcatcagt 16626894  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttca 195  Q
    ||||| | ||||| || | ||||| ||||||||| ||||| || |||||    
T  16626893 atcctctaccatcgggtcaacctccggtacccgttaatgccatcgttca 16626845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 4892983 - 4893133
Alignment:
Q  49 ggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatat 148  Q
    ||||||||| || ||| | |||||||||||| | || ||  | ||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||     
T  4892983 ggctactgttgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtac 4893082  T
Q  149 cctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  4893083 cctttgccaccgggccaacctcaggtccctgtcaatgccatcgctcaacag 4893133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 5596799 - 5596729
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 174  Q
    ||||||||||||||||||||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  5596799 ccgtattctcagcatccattcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 5596729  T

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Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 17994250 - 17994132
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  17994250 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 17994151  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  17994150 ctcaggtacccgttaatgc 17994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 4625736 - 4625853
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  4625736 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtatcctttgccatcgggtcaac 4625835  T
Q  168 ctcaggtacccgtgaatg 185  Q
    ||||||||||||| ||||    
T  4625836 ctcaggtacccgttaatg 4625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 8211509 - 8211661
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||| ||||| ||||||||||| ||||||||||||||||| ||||| |    
T  8211509 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgcgccgtactctcagcatccgttcttcccaccgttttatcatcagt 8211608  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    | ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  8211609 accctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 8211661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 29149188 - 29149092
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| || | ||||||||    
T  29149188 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgttaatgcaatcgctcaacaga 29149092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 36997522 - 36997426
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | ||||||||| ||||| ||||| ||||  |||||||    
T  36997522 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccacccggccaacctcaggtgcccgtcaatgcaattgcccaacaga 36997426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 47023278 - 47023374
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | ||||||||| ||||| ||||| ||||  |||||||    
T  47023278 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaggtgcccgtcaatgcaattgcccaacaga 47023374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 4347117 - 4347022
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  4347117 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggttcctgtcaatgccatcgctcaacag 4347022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 28021103 - 28021198
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  28021103 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggttcctgtcaatgccatcgctcaacag 28021198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 6542907 - 6542854
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  6542907 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 6542854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5013537 - 5013589
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5013537 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 5466745 - 5466905
Alignment:
Q  39 gtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttta 138  Q
    |||| |||||||||||||| || ||| | ||||| |||||  | |||||  ||||| | |||   ||||||||||||||||| ||||||||||| |||||    
T  5466745 gtcaatctatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccatttta 5466844  T
Q  139 ccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
     ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  5466845 tcatcagtaccctttgccacccggccaacctcaggttcctgtcaatgccatcgctcaacag 5466905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 8301709 - 8301601
Alignment:
Q  92 tactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 191  Q
    ||||| ||||| ||||||||||||||||| ||||| || || || || ||||| || ||||||||| | || | |||||| |||||||| ||||| ||||    
T  8301709 tactcatatgcgccgtattctcagcatcctttctttccgccattctatcatcagtaccctttgccaccgggtcaacctcaagtacccgttaatgcaattg 8301610  T
Q  192 ttcaacaga 200  Q
     ||||||||    
T  8301609 ctcaacaga 8301601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 11110794 - 11110698
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  11110794 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 11110698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 20577295 - 20577255
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  20577295 ccgtattctcagcatcctttcttcccaccgttttaccatca 20577255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 22388065 - 22387913
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | |||||||||||| | || ||  | ||| | |||||||| || ||||||||||| ||||||||| ||||||| ||||| |    
T  22388065 atggctactgttgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccatactctcagcatccgttcttcccatcgttttatcatcagt 22387966  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    | ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  22387965 accctttgccaccgggccaacctcaggtccctgtcaatgccatcgctcaacag 22387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24327984 - 24328036
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  24327984 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 24328036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 28339127 - 28339179
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28339127 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28339179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 29665418 - 29665322
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  29665418 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 29665322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 31964906 - 31964854
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31964906 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31964854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 50134504 - 50134452
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  50134504 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 50134452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 5609754 - 5609703
Alignment:
Q  105 cgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    |||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5609754 cgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5609703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 18277485 - 18277390
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  18277485 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 18277390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 18292786 - 18292691
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  18292786 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 18292691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 18308087 - 18307992
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  18308087 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 18307992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 5652179 - 5652297
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||| ||||| ||| || | ||    
T  5652179 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcgtttgcaatcgggtcaac 5652278  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  5652279 ctcaggtacccgttaatgc 5652297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 17985386 - 17985336
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  17985386 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 17985336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 4416741 - 4416794
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| |||||  | |||||||||    
T  4416741 ccgtattctcagcatccgttcttcccaccgttttatcatcagcaccctttgcca 4416794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 18225019 - 18225068
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  18225019 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 18225068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 4797086 - 4796990
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  4797086 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacaga 4796990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 7073037 - 7073133
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  7073037 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 7073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 7996387 - 7996483
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  7996387 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 7996483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 10642895 - 10642991
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| |||| ||||||||    
T  10642895 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgctcaacaga 10642991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 18242552 - 18242592
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  18242552 ccgtattctcagcatccgttcttcccaccgttttatcatca 18242592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 18530156 - 18530304
Alignment:
Q  38 agtcagtctatggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgtttt 137  Q
    ||||| || |||||||||||  ||||| |||||||||| ||| |||||||| | ||| | ||||| |  || ||||||||||| ||||| ||||| || |    
T  18530156 agtcaatccatggctactgttacccctattaatgctgcccagttacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattct 18530255  T
Q  138 accatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 186  Q
    | ||||| |||||| | ||||| || | |||||| || ||||| |||||    
T  18530256 atcatcagtatcctctaccatcgggtcaacctcaagtgcccgttaatgc 18530304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 28116390 - 28116294
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  28116390 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacaga 28116294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 48465740 - 48465780
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  48465740 ccgtactctcagcatccgttcttcccaccgttttaccatca 48465780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 51781836 - 51781876
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  51781836 ccgtactctcagcatccgttcttcccaccgttttaccatca 51781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 51796925 - 51796965
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  51796925 ccgtactctcagcatccgttcttcccaccgttttaccatca 51796965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 15893145 - 15893043
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||| ||||||||||| ||||| || || || || ||||| || ||||||||| | || | |||||| |||||||| ||||| |||| |||||    
T  15893145 tatgcgccgtactctcagcatcctttctttccgcccttctatcatcagtaccctttgccaccgggtcaacctcaagtacccgttaatgcaattgctcaac 15893046  T
Q  198 aga 200  Q
    |||    
T  15893045 aga 15893043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 4721399 - 4721552
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||||||||||||||  ||||| || || ||||| ||||| |    
T  4721399 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcttttctttccgccattttatcatcagt 4721498  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  4721499 accctctgccaccgggtcaacctcaagtacccgtcaatgcaattgctcaacaga 4721552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 35880534 - 35880687
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||||||||||||||| ||||| || || ||||| ||||| |    
T  35880534 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagt 35880633  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  35880634 accctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 35880687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 16041134 - 16041267
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  | ||| | ||||| || || ||||||||||| ||||| ||||| || || ||||| |    
T  16041134 atggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagt 16041233  T
Q  147 atcctttgccatcaggaccacctcaggtacccgt 180  Q
    |||||||| |||| || | |||||||||||||||    
T  16041234 atcctttgtcatcgggtcaacctcaggtacccgt 16041267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 5159330 - 5159482
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | |||||||||||| | || ||  | ||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| |    
T  5159330 atggctactgttgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagt 5159429  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    | ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  5159430 accctttgccaccgggccaacctcaggtccctgtcaatgccatcgctcaacag 5159482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 16450327 - 16450199
Alignment:
Q  50 gctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatc 149  Q
    |||||||| |||||| |||||||||| ||| |||||||  | ||| | || || | ||| ||||||||||| ||||| ||||| ||||| ||||| ||||    
T  16450327 gctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtacgcgcagtactctcagcatcccttctttccaccattttatcatcagtatc 16450228  T
Q  150 ctttgccatcaggaccacctcaggtaccc 178  Q
    |||||||||| || | |||||||||||||    
T  16450227 ctttgccatcgggtcaacctcaggtaccc 16450199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 31088775 - 31088657
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  31088775 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 31088676  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  31088675 ctcaggtacccgttaatgc 31088657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 45733292 - 45733410
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | ||||| |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  45733292 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 45733391  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  45733392 ctcaggtacccgttaatgc 45733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 16503715 - 16503562
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  ||||| | ||||| ||||| ||||||||||| ||||| || || || || ||||| |    
T  16503715 atggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagt 16503616  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    |||| |||||| | || | ||||||||||||||| ||||| |||| ||||||||    
T  16503615 atcccttgccaccgggtcaacctcaggtacccgttaatgcaattgctcaacaga 16503562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 16518751 - 16518598
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| |||||||||| ||  | |||||  ||||| | ||||| ||||| ||||||||||| ||||| || || || || ||||| |    
T  16518751 atggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagt 16518652  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    |||| |||||| | || | ||||||||||||||| ||||| |||| ||||||||    
T  16518651 atcccttgccaccgggtcaacctcaggtacccgttaatgcaattgctcaacaga 16518598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 4145401 - 4145306
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacag 199  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| || || ||||| || | |||||||    
T  4145401 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcctgtcaatgccatcgctcaacag 4145306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 5127800 - 5127953
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||||||||||||||| ||||| || || ||||| ||||| |    
T  5127800 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagt 5127899  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||| ||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  5127900 atcctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacaga 5127953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 5147618 - 5147522
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  5147618 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacaga 5147522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 9618516 - 9618568
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9618516 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9618568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 11441425 - 11441521
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  11441425 ccgtattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 11441521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 24592819 - 24592767
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  24592819 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 24592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26275372 - 26275320
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26275372 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26275320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26320147 - 26320095
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26320147 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26320095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 26435122 - 26435218
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||  |||||||    
T  26435122 ccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattgcccaacaga 26435218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26670192 - 26670140
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26670192 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 31124776 - 31124827
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgc 155  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||    
T  31124776 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgc 31124827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 31564677 - 31564624
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  31564677 ccgtattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 31564624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 3445159 - 3445199
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  3445159 ccgtactctcagcatccgttcttcccaccgttttaccatca 3445199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 11425054 - 11424958
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  11425054 ccgtattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaatcgctcaacaga 11424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 26486022 - 26485982
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  26486022 ccgtactctcagcatccgttcttcccaccgttttaccatca 26485982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 26538151 - 26538111
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  26538151 ccgtactctcagcatccgttcttcccaccgttttaccatca 26538111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 2154438 - 2154534
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| ||| |||| ||||| |||| ||||||||    
T  2154438 ccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtatccgttaatgcaattgctcaacaga 2154534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 10917143 - 10917047
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| ||||| |||||| ||||| | || | |||||| ||||| || ||||| || | ||||||||    
T  10917143 ccgtattctcagcatcccttctttccgccattttatcatcagtatcctctgccaccgggtcaacctcaagtacctgttaatgcaatcgctcaacaga 10917047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 16736738 - 16736642
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  16736738 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 16736642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 16751792 - 16751696
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  16751792 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 16751696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 17523397 - 17523493
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  17523397 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 17523493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 17529818 - 17529722
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| ||||| || || ||||| |||||||| ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  17529818 ccgtattctcagcatcctttctttccgccattttatcatcaataccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 17529722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 45387208 - 45387304
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    ||||||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||  |||||||    
T  45387208 ccgtattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattgcccaacaga 45387304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 8e-17; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 20460914 - 20461062
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||| | |||||| |||||||||| ||| ||||||| || ||| | ||||| |  || ||||||||||| ||||| ||||| || || |||||||    
T  20460914 atggctactattgcccctattaatgctgcccagttacctccgccgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcaat 20461013  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttca 195  Q
    ||||| | ||||| || | ||||||||||||||| ||||| || |||||    
T  20461014 atcctctaccatcgggtcaacctcaggtacccgttaatgccatcgttca 20461062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 20340760 - 20340642
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | || || |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  20340760 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 20340661  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  20340660 ctcaggtacccgtcaatgc 20340642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 51638081 - 51638134
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  51638081 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 51638134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 10962533 - 10962585
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  10962533 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 10962585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 28584844 - 28584896
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28584844 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28584896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 3083 - 2965
Alignment:
Q  68 aatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 167  Q
    ||||||||||||||||||||  | ||| | || || |  || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  3083 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 2984  T
Q  168 ctcaggtacccgtgaatgc 186  Q
    ||||||||||||| |||||    
T  2983 ctcaggtacccgtcaatgc 2965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 29570 - 29723
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| |||||||||| ||  | |||||| | ||| | ||||| ||||||||||||||||| ||||| || || || || ||||| |    
T  29570 atggctactgttgctcctattaatgctgcccaaatgcctccatcgtacccgtatgcgccgtattctcagcatcctttctttccgccattctatcatcagt 29669  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||||||||| | || | |||||| |||||||| ||||| || | ||||||||    
T  29670 accctttgccaccgggtcaacctcaagtacccgttaatgcaatagctcaacaga 29723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 40467 - 40365
Alignment:
Q  98 tatgcaccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaac 197  Q
    ||||| ||||||||||||||||| ||||| |  || || || ||||| || ||||||||| | || | ||||||||||||||| ||||| |||| |||||    
T  40467 tatgcgccgtattctcagcatcctttctttctgccattctatcatcagtaccctttgccaccgggtcaacctcaggtacccgtaaatgcaattgctcaac 40368  T
Q  198 aga 200  Q
    |||    
T  40367 aga 40365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 7801 - 7854
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  7801 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 7854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 125 - 73
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  125 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7631 - 7579
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  7631 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 7579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9458 - 9406
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9458 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19879 - 19931
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19879 ccgtattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 15319 - 15269
Alignment:
Q  107 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  15319 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 15269  T

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Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 579 - 426
Alignment:
Q  47 atggctactgtcgcccctgttaatgctgctcagctacctccaccatactcctatgcaccgtattctcagcatccattcttcccaccgttttaccatcaat 146  Q
    ||||||||||| || ||| | ||||| |||||  | |||||  ||||| | ||||  ||||||||||||||||| ||||| || || ||||| ||||| |    
T  579 atggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagt 480  T
Q  147 atcctttgccatcaggaccacctcaggtacccgtgaatgctattgttcaacaga 200  Q
    | ||| ||||| | || | |||||| |||||||| ||||| |||| ||||||||    
T  479 accctctgccaccgggtcaacctcaagtacccgttaatgcaattgctcaacaga 426  T

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Target: scaffold0144 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 26594 - 26554
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgttttaccatca 144  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  26594 ccgtattctcagcatccgttcttcccaccgttttatcatca 26554  T

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Target: scaffold0415 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 5853 - 5886
Alignment:
Q  104 ccgtattctcagcatccattcttcccaccgtttt 137  Q
    ||||||||||||||||| ||||||||||||||||    
T  5853 ccgtattctcagcatcctttcttcccaccgtttt 5886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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