View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9981_low_13 (Length: 286)

Name: NF9981_low_13
Description: NF9981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9981_low_13
NF9981_low_13
[»] chr4 (80 HSPs)
chr4 (16-186)||(25323797-25323966)
chr4 (16-186)||(50543329-50543498)
chr4 (16-115)||(6666469-6666568)
chr4 (16-186)||(35788811-35788979)
chr4 (16-186)||(35796741-35796910)
chr4 (33-186)||(50870480-50870631)
chr4 (16-172)||(28245539-28245694)
chr4 (16-175)||(5398222-5398378)
chr4 (36-172)||(12005482-12005619)
chr4 (121-186)||(53828522-53828587)
chr4 (16-152)||(25324066-25324202)
chr4 (16-174)||(5398487-5398643)
chr4 (72-186)||(22827509-22827623)
chr4 (16-81)||(1215906-1215971)
chr4 (17-186)||(22231072-22231240)
chr4 (121-186)||(22231307-22231372)
chr4 (21-169)||(27634097-27634244)
chr4 (16-115)||(7572541-7572640)
chr4 (121-184)||(21498815-21498878)
chr4 (16-190)||(52559720-52559893)
chr4 (14-88)||(8902775-8902848)
chr4 (16-54)||(20726732-20726770)
chr4 (57-187)||(35609488-35609617)
chr4 (72-186)||(39902562-39902676)
chr4 (121-187)||(53828287-53828353)
chr4 (125-186)||(12869262-12869323)
chr4 (121-186)||(22845446-22845511)
chr4 (121-186)||(22863494-22863559)
chr4 (121-186)||(35788679-35788744)
chr4 (121-186)||(40717440-40717505)
chr4 (121-186)||(50543566-50543631)
chr4 (26-174)||(7926483-7926631)
chr4 (16-88)||(8903025-8903096)
chr4 (121-169)||(17222668-17222716)
chr4 (34-174)||(30529937-30530077)
chr4 (121-189)||(54054801-54054869)
chr4 (121-184)||(400566-400629)
chr4 (121-184)||(5846166-5846229)
chr4 (67-174)||(7926294-7926401)
chr4 (125-184)||(9685422-9685481)
chr4 (121-184)||(9685652-9685715)
chr4 (121-184)||(21498374-21498437)
chr4 (123-186)||(28073180-28073243)
chr4 (131-186)||(50828207-50828262)
chr4 (122-184)||(14783188-14783250)
chr4 (66-152)||(27464281-27464367)
chr4 (121-175)||(35819138-35819192)
chr4 (121-187)||(53559288-53559354)
chr4 (121-186)||(1518184-1518249)
chr4 (121-186)||(11036510-11036575)
chr4 (146-187)||(19190573-19190614)
chr4 (126-187)||(21685023-21685084)
chr4 (121-186)||(22445472-22445537)
chr4 (121-186)||(22822370-22822435)
chr4 (72-169)||(27634532-27634629)
chr4 (121-186)||(37836100-37836165)
chr4 (121-186)||(40726741-40726806)
chr4 (121-174)||(52559587-52559640)
chr4 (121-184)||(2463826-2463889)
chr4 (121-184)||(20821993-20822056)
chr4 (121-184)||(25052872-25052935)
chr4 (121-184)||(53814930-53814993)
chr4 (121-171)||(2220982-2221032)
chr4 (16-62)||(3055723-3055769)
chr4 (15-93)||(22822501-22822579)
chr4 (20-62)||(25669898-25669940)
chr4 (121-175)||(35645696-35645750)
chr4 (67-165)||(44118879-44118977)
chr4 (126-184)||(53814675-53814733)
chr4 (145-187)||(55100301-55100343)
chr4 (121-186)||(11036745-11036810)
chr4 (121-186)||(17111583-17111648)
chr4 (121-186)||(34358029-34358094)
chr4 (101-174)||(35609722-35609795)
chr4 (19-88)||(43743138-43743207)
chr4 (121-173)||(9279247-9279299)
chr4 (121-157)||(13555495-13555531)
chr4 (126-186)||(21041376-21041436)
chr4 (143-187)||(25324311-25324355)
chr4 (16-56)||(29395837-29395877)
[»] chr1 (73 HSPs)
chr1 (20-186)||(11524917-11525082)
chr1 (20-185)||(11525132-11525296)
chr1 (19-163)||(52676295-52676439)
chr1 (16-195)||(2859382-2859560)
chr1 (16-186)||(35772180-35772349)
chr1 (17-85)||(12325396-12325464)
chr1 (17-85)||(12376537-12376605)
chr1 (71-187)||(31181511-31181627)
chr1 (16-187)||(40188983-40189153)
chr1 (122-184)||(25137304-25137366)
chr1 (16-186)||(25713309-25713478)
chr1 (16-186)||(26177059-26177228)
chr1 (16-84)||(17208705-17208773)
chr1 (75-186)||(4113005-4113116)
chr1 (16-187)||(38733298-38733468)
chr1 (16-186)||(7653392-7653561)
chr1 (16-186)||(25145484-25145653)
chr1 (121-186)||(40079172-40079237)
chr1 (20-76)||(8223420-8223476)
chr1 (67-186)||(11234182-11234301)
chr1 (121-184)||(17452680-17452743)
chr1 (16-186)||(4112539-4112708)
chr1 (16-90)||(4112866-4112939)
chr1 (122-184)||(51589013-51589075)
chr1 (121-186)||(31432229-31432294)
chr1 (16-187)||(39348117-39348285)
chr1 (121-186)||(52650770-52650835)
chr1 (100-180)||(31004442-31004522)
chr1 (122-186)||(35772050-35772114)
chr1 (121-177)||(38080624-38080680)
chr1 (121-189)||(42586435-42586503)
chr1 (121-184)||(3169786-3169849)
chr1 (125-184)||(40316051-40316110)
chr1 (72-186)||(17452827-17452941)
chr1 (16-86)||(27413498-27413567)
chr1 (122-184)||(51589247-51589309)
chr1 (122-184)||(51589827-51589889)
chr1 (65-175)||(52907348-52907458)
chr1 (121-174)||(2859638-2859691)
chr1 (16-89)||(8870785-8870857)
chr1 (121-186)||(8870909-8870974)
chr1 (20-169)||(9146570-9146718)
chr1 (121-174)||(25145731-25145784)
chr1 (125-186)||(25255335-25255396)
chr1 (121-186)||(26865357-26865422)
chr1 (125-186)||(27413371-27413432)
chr1 (122-187)||(29898933-29898998)
chr1 (121-186)||(33156753-33156818)
chr1 (22-186)||(49142873-49143038)
chr1 (17-89)||(16163085-16163155)
chr1 (67-187)||(21626337-21626457)
chr1 (122-186)||(26176929-26176993)
chr1 (29-65)||(36332267-36332303)
chr1 (67-171)||(43480339-43480443)
chr1 (121-172)||(12244975-12245026)
chr1 (72-187)||(20208526-20208639)
chr1 (121-172)||(39348365-39348416)
chr1 (123-169)||(2997262-2997308)
chr1 (72-186)||(15986332-15986446)
chr1 (19-85)||(17412486-17412551)
chr1 (120-186)||(30369854-30369920)
chr1 (121-186)||(4098162-4098227)
chr1 (121-186)||(29265973-29266038)
chr1 (121-186)||(41035826-41035891)
chr1 (16-89)||(51459926-51459997)
chr1 (16-72)||(369783-369839)
chr1 (108-172)||(855988-856052)
chr1 (16-88)||(7307872-7307943)
chr1 (16-72)||(34264598-34264654)
chr1 (50-86)||(44254248-44254284)
chr1 (126-186)||(50695833-50695893)
chr1 (124-184)||(51590061-51590121)
chr1 (122-174)||(52961603-52961655)
[»] chr7 (66 HSPs)
chr7 (16-188)||(30727115-30727287)
chr7 (16-178)||(47849707-47849867)
chr7 (16-186)||(1596744-1596913)
chr7 (16-184)||(29469756-29469923)
chr7 (16-144)||(33996120-33996247)
chr7 (16-186)||(21861445-21861614)
chr7 (23-175)||(48243071-48243220)
chr7 (16-189)||(31892303-31892475)
chr7 (122-184)||(40746286-40746348)
chr7 (121-186)||(21054952-21055017)
chr7 (121-186)||(25620156-25620221)
chr7 (121-184)||(34027413-34027476)
chr7 (16-186)||(40746032-40746200)
chr7 (121-187)||(32474520-32474586)
chr7 (16-89)||(3519821-3519893)
chr7 (121-186)||(4886349-4886414)
chr7 (125-186)||(6991779-6991840)
chr7 (16-85)||(25620287-25620355)
chr7 (121-186)||(31485658-31485723)
chr7 (16-57)||(32292670-32292711)
chr7 (16-89)||(33834342-33834414)
chr7 (121-186)||(47710463-47710528)
chr7 (121-186)||(47722119-47722184)
chr7 (67-186)||(32292484-32292603)
chr7 (121-184)||(29469625-29469688)
chr7 (67-178)||(47849537-47849648)
chr7 (121-184)||(48661556-48661619)
chr7 (121-175)||(2544457-2544511)
chr7 (121-175)||(11211689-11211743)
chr7 (121-183)||(23839079-23839141)
chr7 (125-175)||(32278895-32278945)
chr7 (121-187)||(34027647-34027713)
chr7 (16-186)||(49117168-49117338)
chr7 (21-186)||(2404173-2404336)
chr7 (121-174)||(3038095-3038148)
chr7 (16-89)||(6001531-6001603)
chr7 (121-174)||(6634875-6634928)
chr7 (20-89)||(14540837-14540905)
chr7 (121-174)||(14540963-14541016)
chr7 (16-89)||(22574752-22574824)
chr7 (121-186)||(26239915-26239980)
chr7 (121-186)||(32879613-32879678)
chr7 (16-85)||(36277091-36277159)
chr7 (17-85)||(1936212-1936280)
chr7 (16-72)||(2315138-2315194)
chr7 (122-186)||(21861315-21861379)
chr7 (122-186)||(22574856-22574920)
chr7 (16-84)||(31485525-31485592)
chr7 (125-184)||(22339604-22339663)
chr7 (16-55)||(44056639-44056678)
chr7 (121-175)||(17202199-17202253)
chr7 (16-86)||(18826352-18826421)
chr7 (124-174)||(26028972-26029022)
chr7 (121-186)||(1596614-1596678)
chr7 (123-184)||(6782883-6782944)
chr7 (121-186)||(33996310-33996375)
chr7 (121-186)||(36277225-36277290)
chr7 (121-174)||(40746518-40746571)
chr7 (72-189)||(43688156-43688272)
chr7 (16-53)||(48661451-48661488)
chr7 (15-55)||(6787271-6787311)
chr7 (121-157)||(9689118-9689154)
chr7 (16-88)||(22339464-22339536)
chr7 (16-72)||(40898827-40898883)
chr7 (124-188)||(41191037-41191101)
chr7 (141-189)||(48420738-48420786)
[»] chr8 (79 HSPs)
chr8 (16-187)||(38476194-38476363)
chr8 (16-138)||(8466535-8466656)
chr8 (16-186)||(11232193-11232362)
chr8 (16-184)||(26208013-26208181)
chr8 (75-186)||(38475721-38475832)
chr8 (16-186)||(39960108-39960277)
chr8 (57-169)||(7729897-7730009)
chr8 (16-152)||(37867865-37868001)
chr8 (16-152)||(37868105-37868241)
chr8 (121-188)||(27204984-27205051)
chr8 (121-188)||(27205082-27205149)
chr8 (121-186)||(27205180-27205245)
chr8 (16-89)||(39052790-39052862)
chr8 (121-184)||(5590369-5590432)
chr8 (51-150)||(29907761-29907860)
chr8 (16-187)||(35682779-35682949)
chr8 (121-183)||(4828313-4828375)
chr8 (69-187)||(22638177-22638295)
chr8 (16-85)||(39052637-39052705)
chr8 (121-189)||(6541935-6542003)
chr8 (121-185)||(8929037-8929101)
chr8 (29-89)||(10615035-10615095)
chr8 (16-152)||(37868381-37868516)
chr8 (122-186)||(42846604-42846668)
chr8 (71-163)||(44931204-44931296)
chr8 (16-186)||(8084278-8084447)
chr8 (121-184)||(19256587-19256650)
chr8 (121-184)||(24075307-24075370)
chr8 (121-183)||(26800514-26800576)
chr8 (121-187)||(35385809-35385875)
chr8 (69-175)||(37001194-37001300)
chr8 (64-186)||(37001427-37001549)
chr8 (16-89)||(3157105-3157177)
chr8 (121-186)||(10884085-10884149)
chr8 (121-186)||(11232428-11232493)
chr8 (121-174)||(18004107-18004160)
chr8 (121-186)||(18939296-18939361)
chr8 (121-186)||(20301281-20301346)
chr8 (121-186)||(21087913-21087978)
chr8 (19-144)||(31079603-31079728)
chr8 (121-186)||(39052928-39052993)
chr8 (125-186)||(41790683-41790743)
chr8 (121-189)||(5931945-5932013)
chr8 (122-186)||(10450021-10450085)
chr8 (121-173)||(45031373-45031425)
chr8 (121-184)||(17469838-17469901)
chr8 (121-184)||(17477085-17477148)
chr8 (121-184)||(19256821-19256884)
chr8 (67-170)||(38447442-38447545)
chr8 (16-55)||(38475885-38475924)
chr8 (121-184)||(39743549-39743612)
chr8 (140-195)||(44694699-44694754)
chr8 (125-175)||(4828092-4828142)
chr8 (20-86)||(10615549-10615615)
chr8 (16-86)||(20094659-20094728)
chr8 (72-174)||(24532432-24532534)
chr8 (131-184)||(4963384-4963437)
chr8 (121-186)||(6559448-6559513)
chr8 (125-186)||(10454450-10454511)
chr8 (67-185)||(12022386-12022506)
chr8 (121-186)||(12317066-12317131)
chr8 (121-186)||(12547118-12547183)
chr8 (16-89)||(12688223-12688295)
chr8 (16-89)||(20301412-20301484)
chr8 (16-89)||(21088044-21088116)
chr8 (121-186)||(42049686-42049751)
chr8 (18-78)||(8849335-8849395)
chr8 (121-165)||(20702817-20702861)
chr8 (121-184)||(7267466-7267529)
chr8 (67-186)||(8466723-8466842)
chr8 (123-174)||(8716136-8716187)
chr8 (121-184)||(34842698-34842761)
chr8 (16-55)||(38475988-38476027)
chr8 (124-186)||(422452-422514)
chr8 (121-175)||(3157569-3157623)
chr8 (121-175)||(5932194-5932248)
chr8 (121-186)||(3157326-3157390)
chr8 (16-89)||(3157420-3157492)
chr8 (121-186)||(15042885-15042950)
[»] chr2 (52 HSPs)
chr2 (16-188)||(5711436-5711607)
chr2 (20-185)||(21383284-21383454)
chr2 (16-186)||(16419418-16419587)
chr2 (16-186)||(40379208-40379377)
chr2 (16-186)||(2029920-2030089)
chr2 (16-152)||(33606087-33606222)
chr2 (16-187)||(13210678-13210841)
chr2 (67-186)||(13210492-13210611)
chr2 (121-186)||(17719420-17719485)
chr2 (121-186)||(40379443-40379508)
chr2 (17-93)||(31001839-31001915)
chr2 (121-175)||(2324260-2324314)
chr2 (72-186)||(8227320-8227434)
chr2 (16-188)||(15124545-15124716)
chr2 (121-186)||(28407792-28407857)
chr2 (16-88)||(14466272-14466343)
chr2 (66-186)||(19570973-19571093)
chr2 (123-186)||(2029791-2029854)
chr2 (125-184)||(19191611-19191670)
chr2 (122-185)||(29718349-29718412)
chr2 (121-172)||(32884127-32884178)
chr2 (16-55)||(44529733-44529772)
chr2 (121-175)||(2324494-2324548)
chr2 (124-186)||(14466409-14466471)
chr2 (121-175)||(37769953-37770007)
chr2 (121-186)||(5711674-5711739)
chr2 (16-165)||(16533463-16533611)
chr2 (121-186)||(17719586-17719651)
chr2 (121-186)||(27897605-27897670)
chr2 (131-183)||(5450492-5450544)
chr2 (16-88)||(17525196-17525267)
chr2 (121-185)||(21591802-21591866)
chr2 (16-89)||(24396014-24396088)
chr2 (21-89)||(37812364-37812431)
chr2 (121-168)||(93737-93784)
chr2 (16-79)||(2464784-2464847)
chr2 (123-186)||(37840359-37840422)
chr2 (29-71)||(93791-93833)
chr2 (128-186)||(16419294-16419352)
chr2 (122-184)||(17854930-17854992)
chr2 (123-169)||(40010031-40010077)
chr2 (19-85)||(41069261-41069327)
chr2 (16-49)||(878042-878075)
chr2 (121-174)||(5509099-5509152)
chr2 (121-186)||(14927122-14927187)
chr2 (20-89)||(21383529-21383598)
chr2 (127-184)||(27897504-27897561)
chr2 (123-184)||(33456018-33456078)
chr2 (121-186)||(36352158-36352223)
chr2 (121-169)||(93463-93511)
chr2 (57-89)||(10523209-10523241)
chr2 (134-174)||(27036426-27036466)
[»] chr6 (49 HSPs)
chr6 (16-187)||(4868575-4868745)
chr6 (16-175)||(12329954-12330112)
chr6 (16-186)||(17147659-17147828)
chr6 (34-186)||(9705188-9705339)
chr6 (121-186)||(11721925-11721990)
chr6 (120-192)||(25065087-25065159)
chr6 (18-184)||(30256730-30256895)
chr6 (121-186)||(4868812-4868877)
chr6 (121-186)||(8001549-8001614)
chr6 (121-186)||(33494559-33494624)
chr6 (121-189)||(8026624-8026692)
chr6 (16-88)||(13353352-13353423)
chr6 (16-88)||(33796477-33796548)
chr6 (121-184)||(8026409-8026472)
chr6 (121-184)||(12330180-12330243)
chr6 (121-184)||(12330292-12330355)
chr6 (121-184)||(27656478-27656541)
chr6 (17-62)||(12268943-12268988)
chr6 (121-186)||(13353221-13353286)
chr6 (121-186)||(33796346-33796411)
chr6 (123-186)||(3713364-3713427)
chr6 (16-175)||(6400630-6400788)
chr6 (19-86)||(34345551-34345617)
chr6 (72-186)||(9704991-9705105)
chr6 (124-186)||(13740939-13741001)
chr6 (124-186)||(13746439-13746501)
chr6 (121-187)||(19712972-19713038)
chr6 (16-89)||(3680163-3680234)
chr6 (125-186)||(5648671-5648732)
chr6 (16-89)||(6542804-6542876)
chr6 (121-186)||(6623409-6623474)
chr6 (121-170)||(28867972-28868021)
chr6 (121-186)||(19712734-19712801)
chr6 (16-60)||(20864402-20864446)
chr6 (121-185)||(30256598-30256662)
chr6 (72-175)||(6542953-6543056)
chr6 (125-184)||(8566960-8567019)
chr6 (16-67)||(9496443-9496494)
chr6 (121-184)||(21690742-21690805)
chr6 (121-184)||(27772734-27772797)
chr6 (17-84)||(27993506-27993573)
chr6 (121-175)||(5572394-5572448)
chr6 (121-174)||(2753278-2753331)
chr6 (121-186)||(3680032-3680097)
chr6 (121-186)||(6054423-6054488)
chr6 (121-190)||(6065995-6066064)
chr6 (125-186)||(19639112-19639173)
chr6 (20-68)||(832895-832943)
chr6 (21-89)||(30505658-30505725)
[»] chr5 (58 HSPs)
chr5 (16-186)||(41666756-41666925)
chr5 (16-188)||(18333462-18333632)
chr5 (67-181)||(7369690-7369804)
chr5 (16-186)||(24346500-24346669)
chr5 (16-174)||(8081124-8081282)
chr5 (16-186)||(24269870-24270038)
chr5 (16-191)||(95260-95434)
chr5 (15-152)||(6919227-6919363)
chr5 (125-186)||(15480583-15480644)
chr5 (121-186)||(25258093-25258158)
chr5 (121-186)||(25321883-25321948)
chr5 (16-89)||(33337334-33337406)
chr5 (121-186)||(41666992-41667057)
chr5 (123-187)||(28510113-28510177)
chr5 (17-61)||(30494666-30494710)
chr5 (17-61)||(30535009-30535053)
chr5 (16-170)||(31974356-31974505)
chr5 (121-184)||(8287821-8287884)
chr5 (16-187)||(9368746-9368916)
chr5 (123-185)||(9368617-9368679)
chr5 (72-186)||(19705874-19705988)
chr5 (122-184)||(27132994-27133056)
chr5 (16-89)||(17015972-17016043)
chr5 (121-186)||(18333698-18333763)
chr5 (121-174)||(24528560-24528613)
chr5 (16-169)||(30770065-30770217)
chr5 (121-173)||(170563-170615)
chr5 (138-186)||(30588855-30588903)
chr5 (121-169)||(30758315-30758363)
chr5 (121-184)||(8098337-8098400)
chr5 (121-184)||(24487646-24487709)
chr5 (72-187)||(37405060-37405175)
chr5 (100-186)||(60086-60172)
chr5 (140-186)||(9682315-9682361)
chr5 (129-186)||(12151910-12151967)
chr5 (121-186)||(13296693-13296757)
chr5 (121-186)||(15480342-15480407)
chr5 (121-186)||(17352434-17352499)
chr5 (121-186)||(24531619-24531684)
chr5 (123-184)||(29909722-29909783)
chr5 (121-173)||(7092169-7092221)
chr5 (18-186)||(20510641-20510808)
chr5 (124-184)||(42295602-42295662)
chr5 (16-75)||(6415823-6415882)
chr5 (121-188)||(12034710-12034777)
chr5 (15-86)||(15590088-15590158)
chr5 (100-171)||(17899474-17899545)
chr5 (17-59)||(7051969-7052011)
chr5 (121-186)||(2063733-2063797)
chr5 (121-170)||(6413441-6413490)
chr5 (121-186)||(21306907-21306972)
chr5 (121-186)||(21314745-21314810)
chr5 (19-72)||(24531753-24531806)
chr5 (125-186)||(38731837-38731898)
chr5 (123-186)||(14314637-14314698)
chr5 (122-174)||(17015890-17015942)
chr5 (123-175)||(24647718-24647770)
chr5 (121-169)||(30770281-30770329)
[»] scaffold0519 (2 HSPs)
scaffold0519 (16-187)||(2067-2237)
scaffold0519 (121-186)||(1936-2001)
[»] chr3 (57 HSPs)
chr3 (16-188)||(35038191-35038362)
chr3 (16-175)||(20327624-20327782)
chr3 (16-175)||(13574694-13574853)
chr3 (16-174)||(22775409-22775567)
chr3 (121-186)||(22729120-22729185)
chr3 (121-186)||(45828039-45828104)
chr3 (124-186)||(8018991-8019053)
chr3 (121-186)||(1723075-1723140)
chr3 (121-186)||(4155344-4155409)
chr3 (16-89)||(34992757-34992829)
chr3 (57-174)||(45828202-45828319)
chr3 (18-184)||(50052540-50052704)
chr3 (16-187)||(4155475-4155645)
chr3 (121-184)||(11589805-11589868)
chr3 (16-179)||(21888556-21888719)
chr3 (123-186)||(24866219-24866282)
chr3 (66-184)||(13574922-13575040)
chr3 (15-69)||(31150994-31151048)
chr3 (121-174)||(20327860-20327913)
chr3 (121-186)||(34610581-34610646)
chr3 (121-186)||(54567912-54567977)
chr3 (121-175)||(27670402-27670456)
chr3 (16-62)||(49637338-49637384)
chr3 (121-186)||(1800235-1800300)
chr3 (121-186)||(7697397-7697462)
chr3 (121-186)||(16239611-16239676)
chr3 (121-186)||(17638254-17638319)
chr3 (121-186)||(23708223-23708288)
chr3 (121-186)||(23726679-23726744)
chr3 (121-186)||(23745135-23745200)
chr3 (121-186)||(24063660-24063725)
chr3 (121-186)||(31317248-31317313)
chr3 (100-189)||(33205464-33205553)
chr3 (121-186)||(35038427-35038492)
chr3 (16-89)||(39683364-39683436)
chr3 (121-186)||(45138970-45139035)
chr3 (121-186)||(54368536-54368601)
chr3 (67-186)||(41915137-41915255)
chr3 (123-186)||(8142407-8142469)
chr3 (121-184)||(9272981-9273044)
chr3 (16-67)||(40302178-40302229)
chr3 (123-186)||(43781605-43781668)
chr3 (121-175)||(472070-472124)
chr3 (123-169)||(21832200-21832246)
chr3 (125-186)||(12930127-12930188)
chr3 (121-186)||(20479028-20479092)
chr3 (125-186)||(21888451-21888512)
chr3 (121-186)||(23691423-23691488)
chr3 (121-186)||(35018495-35018560)
chr3 (15-48)||(44146881-44146914)
chr3 (121-173)||(14611196-14611248)
chr3 (121-161)||(23691216-23691256)
chr3 (121-161)||(23708016-23708056)
chr3 (121-161)||(23726472-23726512)
chr3 (121-161)||(23744928-23744968)
chr3 (16-60)||(23897700-23897744)
chr3 (121-161)||(24063453-24063493)
[»] scaffold0692 (3 HSPs)
scaffold0692 (72-186)||(5753-5867)
scaffold0692 (121-186)||(5543-5608)
scaffold0692 (16-70)||(5633-5687)
[»] scaffold0766 (1 HSPs)
scaffold0766 (72-175)||(6245-6348)
[»] scaffold0400 (1 HSPs)
scaffold0400 (121-184)||(3865-3928)
[»] scaffold0365 (1 HSPs)
scaffold0365 (121-184)||(4509-4572)
[»] scaffold0005 (1 HSPs)
scaffold0005 (122-184)||(56480-56542)
[»] scaffold0334 (1 HSPs)
scaffold0334 (121-174)||(4440-4493)
[»] scaffold0048 (1 HSPs)
scaffold0048 (16-85)||(81992-82060)
[»] scaffold0047 (1 HSPs)
scaffold0047 (121-186)||(12667-12732)
[»] scaffold0181 (1 HSPs)
scaffold0181 (126-186)||(20964-21024)
[»] scaffold0129 (1 HSPs)
scaffold0129 (125-175)||(14327-14377)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-67)||(28164-28214)
[»] scaffold0041 (1 HSPs)
scaffold0041 (16-72)||(67401-67457)


Alignment Details
Target: chr4 (Bit Score: 87; Significance: 9e-42; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 25323966 - 25323797
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||| ||||| ||   ||||||||||||||||    
T  25323966 caccatttatatccacgcaccaagcccaatggtgttgggcatgaggggg-gtgttaaagagccccacatcggttgagagatgacctgaacaagtgtttat 25323868  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
     ||  |||||||||||||||||  | |||||||||||  || |||||||| |||||| |||||||||||||    
T  25323867 acgtgggggcaatcctcacctcgcaggccggttttgtggggttgtgttagtcccaactacaaattctaaga 25323797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 50543498 - 50543329
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||| ||||||| ||||| ||||||||||||  |  || | ||||  | |||| |||    
T  50543498 caccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgtt-aagagccccacatcggataggtgatggtctgacaatgtgtgtat 50543400  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  ||||||||||||||| || |||||||||||||  || |||||||||||||||||| | ||||||||    
T  50543399 aagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 50543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 6666568 - 6666469
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||| ||| || || || || | ||||| ||||||||||    
T  6666568 caccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtcccgcattggttgggagatggcctgaagaagtgtttat 6666469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 35788811 - 35788979
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaa-atagactgaacaagtgttta 114  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| | ||||||| |||||||||||||||| |||| || | ||||  | |||||||    
T  35788811 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg-gtgttaa-gagtcccacatcggat-agaacatggcctgacaatgtgttta 35788907  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |  |  ||||||||||||| |||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  35788908 taagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 35796910 - 35796741
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||||| |||| ||||||||||   || || |  |||  | ||||||||    
T  35796910 caccatttatctccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa-gagttccacatcggacaggacatggcatgacaatgtgtttat 35796812  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||||| ||||||||||||| ||| ||||||| | |||||||| | ||||||||    
T  35796811 aagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgttaagtccaaccaccatttctaaga 35796741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 50870631 - 50870480
Alignment:
Q  33 caccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctc 132  Q
    |||||||||  |||||| |||||||||||| |||||||||||||| |||||| ||  |||| || | ||||||||||||||||  |  |||||| |||||    
T  50870631 caccaagccggatagtgctgggcatgagggggtgtgttaaagagt-ccacattggtcgagagatggcctgaacaagtgtttataagtgggggcagtcctc 50870533  T
Q  133 acctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||| | ||||| ||||||  || ||||||||| |||||||||| ||||||||    
T  50870532 acctc-ttagccgattttgtggggttgtgttaggtccaaccacaatttctaaga 50870480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 28245694 - 28245539
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | ||| || ||||||||| ||||| ||||||||||  |  || | ||||  | ||||||||    
T  28245694 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgatggggtgtgttaa-gagtctcacatcggataggtgatggcctgacaatgtgtttat 28245596  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaac 172  Q
      |  |||||||||||||||||| |||||||||||||  || |||||||||||||||    
T  28245595 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 28245539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 5398378 - 5398222
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| ||||||||||||| |||||| | |||||| ||||||||| ||||||||||| |||  ||  || | ||||  | ||||||||    
T  5398378 caccatttatgtccacgaaccaagcccaataatgttggtcgtgaggg-gtgtgttaa-gagtcccacattggacaagtcatggtctgacaatgtgtttat 5398281  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
      | |||||||||||||| |||| |||||||||||||  || ||||||||||||||||||    
T  5398280 aag-aggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccac 5398222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 12005619 - 12005482
Alignment:
Q  36 caagcccaatagtgttgggcatgaggg-tgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcac 134  Q
    |||||||||||||| ||| | |||||| ||||||||||||||||||||||||||  | | || |  ||||||  |||| ||  |  ||||||||||||||    
T  12005619 caagcccaatagtgctggtcgtgaggggtgtgtgttaaagagtcccacatcggacaaaatatggcatgaacatttgttaataagtgggggcaatcctcac 12005520  T
Q  135 ctcataagccggttttgttaggctgtgttaggcccaac 172  Q
    |||| ||||||||||||| ||| |||||||| ||||||    
T  12005519 ctcacaagccggttttgtgaggttgtgttagacccaac 12005482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 53828587 - 53828522
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||||||||||| ||||||  || |||||||||||||||||||| ||||||||    
T  53828587 ggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaaga 53828522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 25324202 - 25324066
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||| ||||||||||||||||||| |||||  |||||| |||||||||||||||| |  | |||| ||| || | | ||||||||||||||    
T  25324202 caccatttatatctacgcaccaagcccaatagtattgggtgtgagggggtgtgttaaagagtccaatgtgggataagagatggccagaacaagtgtttat 25324103  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgt 152  Q
      |  ||||||||  |||||||| ||| || ||||||    
T  25324102 aagtgggggcaattatcacctcacaagtcgattttgt 25324066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 5398643 - 5398487
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgttta 114  Q
    |||||||||| |||||| |||||||| ||||||| ||| | |||||| ||||||||| |||||||||||||||  ||  || | || ||||| |||||||    
T  5398643 caccatttatgtccacgaaccaagccaaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggacaagtcatggcct-aacaatgtgttta 5398546  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |   | |||||||||||||||||| |||||||||||||  || ||||||||| |||||||    
T  5398545 t-aactggggcaatcctcacctcacaagccggttttgtggggttgtgttaggtccaacca 5398487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 22827509 - 22827623
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||||||||||||||  || || | ||||  | ||||||||  |  |||||||||||||||||| |||||||||||||  || ||||||||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaa 22827608  T
Q  172 ccacaaattctaaga 186  Q
    |||| | ||||||||    
T  22827609 ccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 1215906 - 1215971
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtccca 81  Q
    |||||||||| |||||| |||||| ||||||||||||| ||| |||| ||||||||||||||||||    
T  1215906 caccatttatgtccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 1215971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 22231240 - 22231072
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatg 116  Q
    ||||||||| |||||| |||||||||||||||| |   ||||||||  |||||||| |||||| |||||||||  || || | ||||  | ||||||||     
T  22231240 accatttatgtccacgaaccaagcccaatagtgctcatcatgaggggatgtgttaa-gagtcctacatcggataggatatggcctgacaatgtgtttata 22231142  T
Q  117 cgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
     |  ||| |||||||||||||| |||||||||||||  || ||| ||||| |||||||| | ||||||||    
T  22231141 agtggggacaatcctcacctcacaagccggttttgtggggttgtattaggtccaaccacgatttctaaga 22231072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 22231372 - 22231307
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  22231372 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22231307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 27634244 - 27634097
Alignment:
Q  21 tttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgca 120  Q
    ||||| |||||| |||||||||||||||| ||| | |||||| | ||||| ||||||||||||||||||  || || | ||||  | ||||||||  |      
T  27634244 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgtt-aagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 27634146  T
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    |||||||||||||||||| || ||| |||||| ||| || |||||||||    
T  27634145 ggggcaatcctcacctcacaaaccgattttgtaaggatgagttaggccc 27634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 7572640 - 7572541
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||| ||||||||||   ||  ||||||| |||||| |||||||||||||||| ||||  | ||||| || | ||||||||||||||||    
T  7572640 caccatttatatccatgcaccaagccttttaccgttgggcgtgagggggtgtgttaaagagtcctacattagttgagagatggcctgaacaagtgtttat 7572541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 21498815 - 21498878
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  21498815 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 52559720 - 52559893
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgttta 114  Q
    |||||||||| |||||| |||||||||||||||| |||   |||||| |||||||||| | |||||||||||||  || || ||||  |||| |||||||    
T  52559720 caccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgttaaa-aatcccacatcggataggacat-gacttgacaatgtgttta 52559817  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaataa 190  Q
    |  |  || ||||| ||||||||| |||||||||||||  |  ||| |||||||||||||  | ||||||||||||    
T  52559818 taagtgggagcaattctcacctcacaagccggttttgtaggattgtattaggcccaaccatgatttctaagaataa 52559893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 8902775 - 8902848
Alignment:
Q  14 atcaccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    ||||||||||||||||| |||||||||  |||||||||| || |||||| ||||||||||||||| || ||||||    
T  8902775 atcaccatttatatccatgcaccaagct-aatagtgttgagcgtgagggggtgtgttaaagagtctcatatcgga 8902848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 20726770 - 20726732
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttggg 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20726770 caccatttatatccacgcaccaagcccaatagtgttggg 20726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 187
Target Start/End: Complemental strand, 35609617 - 35609488
Alignment:
Q  57 tgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttagg 156  Q
    |||||| ||||||||| ||||||||||| ||||| || || | || |||||||||||||  |  |||||||||||||||||| ||| |||||||||  ||    
T  35609617 tgagggggtgtgttaa-gagtcccacattggatgggagatggcctaaacaagtgtttataagtgggggcaatcctcacctcacaagtcggttttgtgggg 35609519  T
Q  157 ctgtgttaggcccaaccacaaattctaagaa 187  Q
     ||||| |  ||||||||| | |||||||||    
T  35609518 ttgtgtaacacccaaccacgatttctaagaa 35609488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 39902676 - 39902562
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||||||||||||||  || || | ||||  | ||||||||  |  |||||||||||||||||| |||| ||||||||  || ||||||||||||||    
T  39902676 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaa 39902577  T
Q  172 ccacaaattctaaga 186  Q
    |||| | ||||||||    
T  39902576 ccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 53828353 - 53828287
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    ||||||||||||||||||||| ||| ||||||  || |||||||||||||| ||||| |||||||||    
T  53828353 ggggcaatcctcacctcataaaccgattttgtggggttgtgttaggcccaatcacaatttctaagaa 53828287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 12869323 - 12869262
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||  || |||||||||||||||||| | ||||||||    
T  12869323 caatcctcacctcataagacggttttgtggggttgtgttaggcccaaccacgatttctaaga 12869262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 22845511 - 22845446
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| ||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  22845511 ggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 22863494 - 22863559
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||| || |||||||||||||  || |||||||||||||||||| | ||||||||    
T  22863494 ggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 35788679 - 35788744
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||| |  || |||||||||||||||||| | ||||||||    
T  35788679 ggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaaga 35788744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 40717505 - 40717440
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||| |||||||||  || |||||||||||||||||| | ||||||||    
T  40717505 ggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaaga 40717440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 50543631 - 50543566
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||   | |||||||||||||||||| | ||||||||    
T  50543631 ggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaaga 50543566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 7926483 - 7926631
Alignment:
Q  26 atccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggc 125  Q
    ||||||| ||||||||||||| || | | | |||||| |||||||||||||||||||||||||  | | || | ||||||| |||||| |  |  |||||    
T  7926483 atccacgaaccaagcccaataatggtagtcgtgagggggtgtgttaaagagtcccacatcggacaaaagatggcctgaacatgtgtttgtaagtgggggc 7926582  T
Q  126 aatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||||||  |   |||| ||||||  || |||||||||||||||||    
T  7926583 aatcctcaccctacgtgccgattttgtggggttgtgttaggcccaacca 7926631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 8903025 - 8903096
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    ||||||||||||||| |||||||||  |||||||||| || |||||| ||||||||||||||| || ||||||    
T  8903025 caccatttatatccatgcaccaagct-aatagtgttgagcgtgagggggtgtgttaaagagtctcatatcgga 8903096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 17222716 - 17222668
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  17222716 ggggcaatcctcacctcacaagccggttttgtaaggatgtgttaggccc 17222668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 30530077 - 30529937
Alignment:
Q  34 accaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctca 133  Q
    ||||||| |||||||| |||   |||||||||||||||||||||  ||||||||   | |||| || |||||| ||||||||  |  |||| ||| ||||    
T  30530077 accaagctcaatagtgatggttgtgagggtgtgtgttaaagagtttcacatcgggcaaaaaatggattgaacatgtgtttataagttggggtaattctca 30529978  T
Q  134 cctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||| ||||||||||| | ||  |||||||||| ||||||    
T  30529977 cctcacaagccggttttatgagattgtgttaggctcaacca 30529937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 54054869 - 54054801
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    |||||||| |||||||||||||||| ||||||  || |||||||||||||||||| | |||||| ||||    
T  54054869 ggggcaattctcacctcataagccgtttttgtggggttgtgttaggcccaaccacgatttctaataata 54054801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 400629 - 400566
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||| ||||||||||||| ||||||||||||| ||| ||||||| || ||||||||| ||||||    
T  400629 ggggaaatcctcacctcacaagccggttttgtgaggttgtgttaagctcaaccacaatttctaa 400566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 5846166 - 5846229
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||||||||||||||||||||  || || ||||||| ||||||| | ||||||    
T  5846166 ggggcaatcctcacctcataagccggttttgtggggttgcgttaggctcaaccacgatttctaa 5846229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 7926294 - 7926401
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    ||||||||||| ||||||||||  | | || | ||||||| ||||||||  |  |||||| |||||||  || |||||||||||||  ||||||||||||    
T  7926294 tgttaaagagttccacatcggacaaaagatggcctgaacatgtgtttataagtgggggcattcctcacaacacaagccggttttgtggggctgtgttagg 7926393  T
Q  167 cccaacca 174  Q
    ||||||||    
T  7926394 cccaacca 7926401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 9685422 - 9685481
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||| ||| ||||||||| ||| |||||||||||||||||| | ||||||    
T  9685422 caatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaa 9685481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 9685652 - 9685715
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| ||||||||||| |  || |||||||||||||||||| | ||||||    
T  9685652 ggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 21498374 - 21498437
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || | |||||||||||||||| | ||||||    
T  21498374 ggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaa 21498437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 28073243 - 28073180
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||| |||||||||| |||| ||||||||  || |||||||||||||||||||| ||||||||    
T  28073243 ggcaaccctcacctcacaagctggttttgtggggttgtgttaggcccaaccacaatttctaaga 28073180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 50828262 - 50828207
Alignment:
Q  131 tcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||| | |||||||||||  ||||||||||||||||| ||||||||||||||    
T  50828262 tcacctcacaggccggttttgtggggctgtgttaggcccaaacacaaattctaaga 50828207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 14783250 - 14783188
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||| |||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  14783250 gggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 14783188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 27464367 - 27464281
Alignment:
Q  66 gtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgt 152  Q
    |||||||||||||||||||||||| ||| ||   ||||  ||||||||||  |  | |||||||||||||||| |||||||||||||    
T  27464367 gtgttaaagagtcccacatcggataagagatttcctgacaaagtgtttataagtggaggcaatcctcacctcacaagccggttttgt 27464281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 35819192 - 35819138
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||| ||||| ||||| ||||||| ||| ||||||||||||||||||    
T  35819192 ggggcaatcctcgcctcacaagccagttttgtgaggttgtgttaggcccaaccac 35819138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 53559354 - 53559288
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    |||||||||||||||| | |||||| ||||||  || |||||||||||||||||| | |||||||||    
T  53559354 ggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccacgatttctaagaa 53559288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 1518184 - 1518249
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| |||| |||||||||||||  || ||||||||||| |||||| | ||||||||    
T  1518184 ggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaaga 1518249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 11036575 - 11036510
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||| ||||||||||||   || |||||||| ||||||||||| ||||||||    
T  11036575 ggggcaatcatcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaaga 11036510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 19190614 - 19190573
Alignment:
Q  146 gttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  19190614 gttttgtagggctgtgttaggcccaaccacaaattctaagaa 19190573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 21685023 - 21685084
Alignment:
Q  126 aatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    ||||||||||||| |||||| ||||||  || ||||||| |||||||||||| |||||||||    
T  21685023 aatcctcacctcacaagccgattttgtggggttgtgttaagcccaaccacaatttctaagaa 21685084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 22445472 - 22445537
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||  | ||| |||||||||  || |||||||| ||||||||||||||||||||    
T  22445472 ggggcaatcctcaccctacaagtcggttttgtggggttgtgttagacccaaccacaaattctaaga 22445537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 22822370 - 22822435
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| |||||||||| || |||||||||||||  || ||| ||||| |||||||||||||||||||    
T  22822370 ggggaaatcctcaccacacaagccggttttgtgcggttgtattaggtccaaccacaaattctaaga 22822435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 27634629 - 27634532
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    ||||||||||||||||||  || || | ||||  | ||||||||| |  |||||||||||||||||| ||||||||||||| | | || |||||||||    
T  27634629 aagagtcccacatcggataggacatggcctgacaatgtgtttatgagtgggggcaatcctcacctcacaagccggttttgtaacgatgagttaggccc 27634532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 37836100 - 37836165
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||| ||| | |||||||||||||  || ||||||||||| |||||||| ||||||||    
T  37836100 ggggcaatcctctccttacaagccggttttgtggggttgtgttaggcctaaccacaatttctaaga 37836165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 40726741 - 40726806
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| ||||||||||||| |||||||||||||  |  |||||||||||||||||| | ||||||||    
T  40726741 ggggaaatcctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaaga 40726806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 52559587 - 52559640
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||||| |||||||| |||||||||||||  || |||||||||||||||||    
T  52559587 ggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaacca 52559640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 2463826 - 2463889
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||| |||||| |||||||||||||  || ||||||||||||| |||| | ||||||    
T  2463826 ggggcaatccttacctcacaagccggttttgtggggttgtgttaggcccagccaccatttctaa 2463889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 20821993 - 20822056
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||| ||||||||| |||||||||||||  |  |||||||||||||||||| | ||||||    
T  20821993 ggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 20822056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 25052872 - 25052935
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||| ||||| ||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  25052872 ggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 53814993 - 53814930
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| ||| |||||||||  || ||||||| |||||||||| | ||||||    
T  53814993 ggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaa 53814930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 2221032 - 2220982
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||||||||||||||| ||||||||||||| |||  | |||||||||||    
T  2221032 ggggcaatcctcacctcacaagccggttttgtaaggacgagttaggcccaa 2220982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 3055723 - 3055769
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgaggg 62  Q
    |||| ||||||| |||||||||||| |||||||| ||||||||||||    
T  3055723 caccgtttatatacacgcaccaagctcaatagtgctgggcatgaggg 3055769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 22822501 - 22822579
Alignment:
Q  15 tcaccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgaga 93  Q
    ||||||| || |||||||||||||| ||||||||||| ||  ||| || |||| |||||||||| ||||| || |||||    
T  22822501 tcaccatatacatccacgcaccaagtccaatagtgtttggtgtgacggggtgttttaaagagtctcacattggttgaga 22822579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 25669898 - 25669940
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgaggg 62  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||    
T  25669898 atttatatacacgcaccaagcccaatagtgctgggcgtgaggg 25669940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 35645750 - 35645696
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    ||||||||| |||||||| ||||||||||| | ||| ||||||| ||||||||||    
T  35645750 ggggcaatcatcacctcagaagccggttttatgaggttgtgttaagcccaaccac 35645696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 44118977 - 44118879
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttag 165  Q
    ||||||||||||||||||||||| ||| || | ||||  | ||||||||  |  |||| ||||||||||||| ||||| |||||||  || ||||||||    
T  44118977 tgttaaagagtcccacatcggataagagatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagcccgttttgtggggttgtgttag 44118879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 53814733 - 53814675
Alignment:
Q  126 aatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||| |||||||||||||  |  |||||||||||||||||| | ||||||    
T  53814733 aatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 53814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 55100301 - 55100343
Alignment:
Q  145 ggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    |||||||| | | ||||||||||||||||||||||||||||||    
T  55100301 ggttttgtgaagttgtgttaggcccaaccacaaattctaagaa 55100343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 11036810 - 11036745
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||| || |||  || ||||||||||| |||||||| || |||||    
T  11036810 ggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaaga 11036745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 17111583 - 17111648
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | || | ||||||||  || |||||||||||||||||| | ||||||||    
T  17111583 ggggcaatcctcaccttaaaaactggttttgtggggttgtgttaggcccaaccacgatttctaaga 17111648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 34358094 - 34358029
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| ||| |||||||||||||  || |||||||||| ||| ||| | ||||||||    
T  34358094 ggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaaga 34358029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 35609795 - 35609722
Alignment:
Q  101 tgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||  |  ||| |||||||||||||| |||||||||||||  || ||||| || ||||||||    
T  35609795 tgaacaagtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaacca 35609722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 43743138 - 43743207
Alignment:
Q  19 catttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    ||||||| |||||| ||||| ||||||| || |||   |||||| ||||||||||||||| |||||||||    
T  43743138 catttatgtccacgaaccaaacccaataatgctggttgtgagggagtgtgttaaagagtctcacatcgga 43743207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 9279247 - 9279299
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacc 173  Q
    ||||||||| ||||||||  ||||||||||||  || ||||||||||||||||    
T  9279247 ggggcaatcatcacctcactagccggttttgtggggttgtgttaggcccaacc 9279299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 13555531 - 13555495
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggc 157  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  13555531 ggggaaatcctcacctcacaagccggttttgttaggc 13555495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 21041376 - 21041436
Alignment:
Q  126 aatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| || |||||||||  | | | |||||||| ||||||||||||||||||    
T  21041376 aatcctcacctcacaaaccggttttgcgaagttatgttaggcacaaccacaaattctaaga 21041436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 25324311 - 25324355
Alignment:
Q  143 ccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    |||||||||| |||||||||||||| ||||||| | |||||||||    
T  25324311 ccggttttgtgaggctgtgttaggcgcaaccacgatttctaagaa 25324355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 29395877 - 29395837
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggca 56  Q
    |||||||||||  |||||| |||||||||||||||||||||    
T  29395877 caccatttatacacacgcatcaagcccaatagtgttgggca 29395837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 11524917 - 11525082
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgc 119  Q
    |||||||||||||||||||| | ||||||||||||||||| || | |||||||||||||||||||||| ||||| || |  |||| ||||||||||  ||    
T  11524917 atttatatccacgcaccaagtctaatagtgttgggcatgatgggg-gtgttaaagagtcccacatcggttgagagatggtttgaataagtgtttataagc 11525015  T
Q  120 aggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||| || || |||||||||| ||| ||||||||||||| |||||| ||||||||    
T  11525016 aggggcaatgctcaccccacaatccggttttgtgaggttgtgttaggcccatccacaatttctaaga 11525082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 11525132 - 11525296
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgc 119  Q
    |||||||||||||||||||| | ||||||||||||||||| || | |||||||||||||||||||||| ||||| || |  |||| ||||||||||  ||    
T  11525132 atttatatccacgcaccaagtctaatagtgttgggcatgatgggg-gtgttaaagagtcccacatcggttgagagatggtttgaataagtgtttataagc 11525230  T
Q  120 aggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaag 185  Q
    ||||||||| |||||| || || |||||||||| ||| ||||||||||||| | |||| |||||||    
T  11525231 aggggcaatgctcaccccacaatccggttttgtgaggttgtgttaggcccatcaacaatttctaag 11525296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 52676439 - 52676295
Alignment:
Q  19 catttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcg 118  Q
    |||||||||||||||||||| |||||||||| || ||||||||| | ||||||||||||||||||| |||| ||| || |  |||||||||||||||  |    
T  52676439 catttatatccacgcaccaaacccaatagtgatgagcatgagggggggtgttaaagagtcccacattggataagagatggtatgaacaagtgtttataag 52676340  T
Q  119 caggggcaatcctcacctcataagccggttttgttaggctgtgtt 163  Q
      |||| |||| | |||||| || |||||||||| ||| ||||||    
T  52676339 tgggggtaatcatgacctcaaaaaccggttttgtgaggttgtgtt 52676295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 2859560 - 2859382
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| | ||| ||| ||||||||||||||||  |  || | ||||  | ||||||||    
T  2859560 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgataa-gagtcccacatcggataggtgatggcctgacaatgtgtttat 2859462  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaataatattt 195  Q
      |  ||||||||||| |||||| ||||||||| ||| ||| |||||||||||||||||| | |||||||| ||| ||||    
T  2859461 aagtgggggcaatccttacctcacaagccggttctgtgaggttgtgttaggcccaaccaccatttctaagagtaacattt 2859382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 35772180 - 35772349
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| ||||||||||||||||  ||   |||| | ||||||||| ||||||||||||||||  || || | ||||  | ||||||||    
T  35772180 caccatttatgtccacgaaccaagcccaatagtgccggttgtgagcgggtgtgttaa-gagtcccacatcggataggagatggcctgacaatgtgtttat 35772278  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  ||||||||||| |||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  35772279 aagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35772349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 12325464 - 12325396
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    ||||||||| |||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  12325464 accatttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtctcacatc 12325396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 12376605 - 12376537
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    ||||||||| |||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  12376605 accatttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtctcacatc 12376537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 31181627 - 31181511
Alignment:
Q  71 aaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggccca 170  Q
    ||||||| |||||| |||| ||| || | ||||||| ||||||||  |  |||||||||||||||||| |||| |||||| |  || |||||||||||||    
T  31181627 aaagagttccacattggataagagatggcctgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttatggggttgtgttaggccca 31181528  T
Q  171 accacaaattctaagaa 187  Q
    |||||||||||||||||    
T  31181527 accacaaattctaagaa 31181511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 40189153 - 40188983
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||  ||||| |||||| | |||| | ||   |  || |  |||||||    
T  40189153 caccatttatatccacgcaccaagcccaatagtgttggatgtgagggtgtgtgtt-gagagttccacattgcatgaaagatgtccgaaagatatgtttat 40189055  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      | ||||| | |||||| |||| ||| |||||||||  || ||||| ||||||||||||||||||||||||    
T  40189054 aagtaggggaagtcctcaactcacaagtcggttttgtggggttgtgtcaggcccaaccacaaattctaagaa 40188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 25137366 - 25137304
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||    
T  25137366 gggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacaatttctaa 25137304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 25713309 - 25713478
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||| | ||||| ||||||||||||||||||  |  || | ||||  | ||||||||    
T  25713309 caccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggggtgtt-aagagtcccacatcggataggtgatggtctgacaatgtgtttat 25713407  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  ||||||||| |||||||| ||||| |||||||   | ||||||||||| |||||| | ||||||||    
T  25713408 aagtgggggcaatcgtcacctcacaagccagttttgtggagttgtgttaggcctaaccaccatttctaaga 25713478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 26177059 - 26177228
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||||| |||||| ||||||||| ||| | ||| || ||||||| |||||||||||||||||   || ||   ||||  | ||||||||    
T  26177059 caccatttatatccacgaaccaagtccaatagtgctggtcgtgacggggtgtgtt-aagagtcccacatcggacaggacatgacctgacaacgtgtttat 26177157  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||||| || || |||||||  || |||||||||||||||||| | ||||||||    
T  26177158 aagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgttaggcccaaccacgatttctaaga 26177228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 17208705 - 17208773
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacat 84  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||| || |||||    
T  17208705 caccatttatatccacccaccaagcccaatagtgttgggcgtgagggggtgtgtgaaagaatctcacat 17208773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 186
Target Start/End: Complemental strand, 4113116 - 4113005
Alignment:
Q  75 agtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||| || || | ||||  | ||||||||  |  |||||||||||||||||| |||||||||||||  || |||||||||||||||||    
T  4113116 agtcccacatcggatgggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 4113017  T
Q  175 caaattctaaga 186  Q
    | | ||||||||    
T  4113016 cgatttctaaga 4113005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 38733298 - 38733468
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||| ||| || ||||||||||||| ||| | ||| |  ||||||||| ||||||||||||||||  |  || | ||||  |  |||||||    
T  38733298 caccatttatatctacgaactaagcccaatagtgctggtcgtgaagaggtgtgttaa-gagtcccacatcggatatgtgatggtctgacaatatgtttat 38733396  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |   ||||||||||||||||||| ||||||||||| ||| ||||||||||||||| || | |||||||||    
T  38733397 aagtgagggcaatcctcacctcataggccggttttgtgaggttgtgttaggcccaacaacgatttctaagaa 38733468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 7653392 - 7653561
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| | |||| ||||| | |||||||||||| | |||||| ||||||||| | ||||||||||| || ||| |||| || |  |  |||||||    
T  7653392 caccatttatgtacacgaaccaaacgcaatagtgttggtcgtgagggagtgtgttaa-gcgtcccacatcgaataagagatagcctcacgatttgtttat 7653490  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
     ||  ||||||||||| |||||| |||| | ||||||  |  |||||||||||||||||||| ||||||||    
T  7653491 acgtgggggcaatccttacctcagaagctgattttgtgggattgtgttaggcccaaccacaatttctaaga 7653561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 25145653 - 25145484
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||| || |||||| | ||||| |||||||| ||| | |||||| ||||||||| ||||| ||||||||||  |  || | ||||  | ||||||||    
T  25145653 caccattaatgtccacgaatcaagctcaatagtgctggtcgtgagggggtgtgttaa-gagtctcacatcggataggtgatggtctgacaatgtgtttat 25145555  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||||| ||| ||||||||| ||| |||||||| ||||||||| | ||||||||    
T  25145554 tagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaaga 25145484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 40079172 - 40079237
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  40079172 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 8223476 - 8223420
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagag 76  Q
    ||||||||||| |||||||||||||||||||||||  |||||| |||||||||||||    
T  8223476 atttatatccatgcaccaagcccaatagtgttgggtgtgagggcgtgtgttaaagag 8223420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 11234182 - 11234301
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    ||||||||||||||| ||  | || || || | ||||||||||||||||  |  ||| || | |||||||||||||||||||||||  || ||| |||||    
T  11234182 tgttaaagagtcccatattagttgggagatggcctgaacaagtgtttataagtggggacagttctcacctcataagccggttttgtggggttgtattagg 11234281  T
Q  167 cccaaccacaaattctaaga 186  Q
    |||||||||||||| |||||    
T  11234282 cccaaccacaaattataaga 11234301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 17452743 - 17452680
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  17452743 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 4112708 - 4112539
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| || ||| |||||||||||||||||||| | |||||| | ||||| |||||||||||||||||   || || |  |||  | ||||||||    
T  4112708 caccatttatgtcaacgaaccaagcccaatagtgttggtcgtgagggggggtgtt-aagagtcccacatcggacaggacatggcatgacaatgtgtttat 4112610  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      | |||||||||| |||||||| |||||| |||| |  |  |||||||||| ||||||| | ||||||||    
T  4112609 aagtaggggcaatcatcacctcacaagccgattttatgggattgtgttaggcacaaccacgatttctaaga 4112539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 4112939 - 4112866
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatg 90  Q
    |||||||||| |||||| ||||||| |||||||| ||| | |||||| ||||||||| |||||||||||||||||    
T  4112939 caccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggatg 4112866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 51589013 - 51589075
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  51589013 gggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 51589075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 31432294 - 31432229
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||| ||||||||||||| | ||||||||    
T  31432294 ggggcaatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaaga 31432229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 39348285 - 39348117
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | ||| || |||||   ||||||||||||||||||  || |||| ||||  | ||||||||    
T  39348285 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgacggggtgtg---aagagtcccacatcggataggagatagcctgacaatgtgtttat 39348189  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |  | ||||||||||| || |  |||||||| |||  || |||||||| ||||||||| | |||||||||    
T  39348188 aagtggaggcaatcctcaacttaccagccggttctgtggggttgtgttagacccaaccacgatttctaagaa 39348117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 52650835 - 52650770
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||| ||||||||  || ||||||||||||||||| || ||||||||    
T  52650835 ggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaaga 52650770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 31004522 - 31004442
Alignment:
Q  100 ctgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaatt 180  Q
    ||||||| ||||||||  |  |||||||||||||||||| |||| ||||||||| || || ||||| ||||||||||||||    
T  31004522 ctgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttgttgggttgcgttagacccaaccacaaatt 31004442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 35772050 - 35772114
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||  |||||||||||||  || |||||||||||||||||| | ||||||||    
T  35772050 gggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35772114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 38080624 - 38080680
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaa 177  Q
    |||||||||||||||||| ||||| |||||||  || ||||||||||||||||||||    
T  38080624 ggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaa 38080680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 42586503 - 42586435
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    |||||||||||||||||| |||||  ||||||  || |||||||||||||||||| | |||||||||||    
T  42586503 ggggcaatcctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaagaata 42586435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 3169786 - 3169849
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||| |||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  3169786 ggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 3169849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 40316110 - 40316051
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||||||||||||| ||| ||||||||  |||||||| | ||||||    
T  40316110 caatcctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaa 40316051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 17452941 - 17452827
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||||||||||||||| ||| || | ||||  | || |||||  |  ||||||||| |||||||| |||||||||||||  || ||||||||||| ||    
T  17452941 aagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaa 17452842  T
Q  172 ccacaaattctaaga 186  Q
    |||| | ||||||||    
T  17452841 ccacgatttctaaga 17452827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 27413498 - 27413567
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcg 86  Q
    |||||||||| |||||| | |||||||||||||||||| | |||| | |||||||||| ||||||||||||    
T  27413498 caccatttatgtccacgaatcaagcccaatagtgttggtcgtgagagggtgtgttaaa-agtcccacatcg 27413567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 51589247 - 51589309
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||||| |||||||||||||  || ||||||||||| |||||| | ||||||    
T  51589247 gggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaa 51589309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 51589827 - 51589889
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||||| |||||| ||||||  || |||||||||||||||||| | ||||||    
T  51589827 gggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 51589889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 52907348 - 52907458
Alignment:
Q  65 tgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgtta 164  Q
    ||||||||| ||||||||||||||| | | || |  |||||| ||||||||  |  |||||||||||||||||| |||| ||||||||  || ||||| |    
T  52907348 tgtgttaaatagtcccacatcggataaaatatggtttgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtaa 52907447  T
Q  165 ggcccaaccac 175  Q
    | |||||||||    
T  52907448 gacccaaccac 52907458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 2859691 - 2859638
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||| ||||||||||||| ||||||||||||| ||| |||||||| ||||||||    
T  2859691 ggggtaatcctcacctcacaagccggttttgtgaggttgtgttagccccaacca 2859638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 8870857 - 8870785
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| ||||| |||||| ||| ||| | |||||| ||||||||| ||||||||||||||||    
T  8870857 caccatttatgtccacgaaccaaacccaattgtgctggtcgtgagggggtgtgttaa-gagtcccacatcggat 8870785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 8870974 - 8870909
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||| |||||||||||||||| ||||||  || ||||||||| |||||||| | ||||||||    
T  8870974 ggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaaga 8870909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 9146718 - 9146570
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgc 119  Q
    |||||| |||||| ||||||| |||||||| | | | |||||| ||||||| | |||||||||||||||  | | || | ||||||| |||| |||        
T  9146718 atttatgtccacgaaccaagctcaatagtgctagtcgtgaggg-gtgtgttcacgagtcccacatcggacaaaagatggtctgaacatgtgtatataact 9146620  T
Q  120 aggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
     |||||||||||||||||| ||  |||||||||| || ||||||||||||    
T  9146619 gggggcaatcctcacctcacaaaacggttttgttgggttgtgttaggccc 9146570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 25145784 - 25145731
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||||| ||||||| |||||  || |||||||||||||||||    
T  25145784 ggggcaatcctcacctcacaagccggatttgtggggttgtgttaggcccaacca 25145731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 25255335 - 25255396
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| ||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  25255335 caattctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 25255396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 26865422 - 26865357
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||| ||||||| |||||||||||||  || ||| |||||| ||||||||| ||||||||    
T  26865422 ggggcaatccccacctcacaagccggttttgtggggttgtattaggctcaaccacaatttctaaga 26865357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 27413371 - 27413432
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| |||||| |||||| ||| ||||||||| |||||||| | ||||||||    
T  27413371 caatcctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaaga 27413432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 29898933 - 29898998
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    ||||||| |||||| || ||||||||||||| ||| |||| ||||||||||||| | |||||||||    
T  29898933 gggcaattctcaccacacaagccggttttgtgaggttgtgctaggcccaaccacgatttctaagaa 29898998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 33156753 - 33156818
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| |||| || ||||||||||  || |||||||||||||||||| | ||||||||    
T  33156753 ggggcaatcctcatctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaga 33156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 49142873 - 49143038
Alignment:
Q  22 ttatatccacgcaccaagcccaatagtgttgggcatgaggg-tgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgca 120  Q
    |||| |||||| ||||| ||||||||  |||| |||||||| ||||| ||||||||||||||||| ||  | | || |  |||||| ||||||||  |      
T  49142873 ttatgtccacgaaccaaacccaataggtttggtcatgaggggtgtgtattaaagagtcccacatcagacaaaatatggcatgaacatgtgtttataagtg 49142972  T
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| |||| |||||  ||||||  |  ||||||| |||||||||| | ||||||||    
T  49142973 ggggcaatcctcagctcacaagccaattttgtgggattgtgttatgcccaaccaccatttctaaga 49143038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 16163085 - 16163155
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    ||||||||| ||||||  ||||||||| ||||| ||| | |||||||||||||||| ||||||||||||||||    
T  16163085 accatttatgtccacgagccaagccca-tagtgctggtcgtgagggtgtgtgttaa-gagtcccacatcggat 16163155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 21626457 - 21626337
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    ||||||||||||||||||| ||| ||| || | ||||  |  |||||||  |  ||||| |||||||| ||| || ||||||||||  |||||| |||||    
T  21626457 tgttaaagagtcccacatcagataagagatggcctgacaatatgtttataagtgggggccatcctcacttcaaaatccggttttgtggggctgttttagg 21626358  T
Q  167 cccaaccacaaattctaagaa 187  Q
    ||||||||||  |||||||||    
T  21626357 cccaaccacagtttctaagaa 21626337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 26176929 - 26176993
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||| || ||||||||||  || |||||||||||||||| | | ||||||||    
T  26176929 gggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaaga 26176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 36332267 - 36332303
Alignment:
Q  29 cacgcaccaagcccaatagtgttgggcatgagggtgt 65  Q
    ||||||||||||||||||||||||||||| |||||||    
T  36332267 cacgcaccaagcccaatagtgttgggcataagggtgt 36332303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 43480339 - 43480443
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    ||||||||||||||| || |||||||| || | |||||||||||||||   |  |||| | ||||||||||| ||||||||||| | ||| || |||||     
T  43480339 tgttaaagagtcccatattggatgagagatggcctgaacaagtgtttacaagtgggggtagtcctcacctcacaagccggttttttaaggatgagttaga 43480438  T
Q  167 cccaa 171  Q
    |||||    
T  43480439 cccaa 43480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 12245026 - 12244975
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaac 172  Q
    |||||||||||||||||| |||||||||||||  || ||||||||| |||||    
T  12245026 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggtccaac 12244975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 20208639 - 20208526
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||||||||||||||  || || | ||||  | ||||||||  |  |||||||||||||||||||| |||||||| ||  || ||||||||||||||    
T  20208639 aagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcata-gccggttt-gtggggttgtgttaggcccaa 20208542  T
Q  172 ccacaaattctaagaa 187  Q
    |||| | |||||||||    
T  20208541 ccacgatttctaagaa 20208526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 39348416 - 39348365
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaac 172  Q
    |||||||||||||||||| || ||||||||||  || |||||||||||||||    
T  39348416 ggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaac 39348365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 2997308 - 2997262
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    |||||||||||||||||||||||||||||| | | || |||||||||    
T  2997308 ggcaatcctcacctcataagccggttttgtaaagatgagttaggccc 2997262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 15986446 - 15986332
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||||| |||||||||  || |||| ||||  | ||||||||  |  |||||||||||||||||| |||| ||| ||||  || ||||||||| ||||    
T  15986446 aagagtcctacatcggataggagatagcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggtattgtggggttgtgttaggtccaa 15986347  T
Q  172 ccacaaattctaaga 186  Q
    |||| | ||||||||    
T  15986346 ccaccatttctaaga 15986332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 17412486 - 17412551
Alignment:
Q  19 catttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    ||||||| |||||| | |||||||||||||||||| | ||| || |||||||||| |||||||||||    
T  17412486 catttatgtccacgaatcaagcccaatagtgttggtcgtgatggggtgtgttaaa-agtcccacatc 17412551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 30369854 - 30369920
Alignment:
Q  120 aggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||||| |||   |||||||  || |||||||||||||||||| | ||||||||    
T  30369854 aggggcaatcctcacctcacaagatagttttgtggggttgtgttaggcccaaccacgatttctaaga 30369920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 4098227 - 4098162
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||| | ||| || ||||||||||  |  |||||||||||||||||||| ||||||||    
T  4098227 ggggcaatcctctcttcacaaaccggttttgtgtgattgtgttaggcccaaccacaatttctaaga 4098162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 29265973 - 29266038
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||| ||||||| | |||| ||||||||  || |||||||||||||||||| | ||||||||    
T  29265973 ggggcaatactcaccttacaagctggttttgtggggttgtgttaggcccaaccacgatttctaaga 29266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 41035891 - 41035826
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  |  ||||||||| ||||| || | ||||||||    
T  41035891 ggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 51459997 - 51459926
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| || || |||||| ||| ||| | |||||||||||||||| ||||||||||||||||    
T  51459997 caccatttatgtccacgaacaaa-cccaattgtgctggtcgtgagggtgtgtgttaa-gagtcccacatcggat 51459926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 369783 - 369839
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaa 72  Q
    |||||||||| |||||| |||||||||||||||| ||| | ||||||  ||||||||    
T  369783 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggatgtgttaa 369839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 855988 - 856052
Alignment:
Q  108 gtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaac 172  Q
    |||||||| ||  ||| |||||||||||||| |||| |||||||| ||  |||||||||||||||    
T  855988 gtgtttatacgtggggacaatcctcacctcacaagctggttttgtgagattgtgttaggcccaac 856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 7307872 - 7307943
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    |||||||||| |||||| |||||  ||||||||||||| | |||||| |||| || ||||||| |||||||||    
T  7307872 caccatttatgtccacgaaccaaatccaatagtgttggtcgtgagggggtgtatt-aagagtctcacatcgga 7307943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 34264654 - 34264598
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaa 72  Q
    ||||||||||||| ||| ||||||| |||||||| ||| | |||||| |||||||||    
T  34264654 caccatttatatcgacgaaccaagcacaatagtgctggtcgtgagggggtgtgttaa 34264598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 44254248 - 44254284
Alignment:
Q  50 ttgggcatgagggtgtgtgttaaagagtcccacatcg 86  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  44254248 ttgggcgtgatggtgtgtgttaaagagtcccacatcg 44254284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 50695893 - 50695833
Alignment:
Q  126 aatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||| |||| |||||||||||||  || || |||||||| || ||||||||||||||    
T  50695893 aatcctcagctcacaagccggttttgtggggttgagttaggcctaagcacaaattctaaga 50695833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 51590061 - 51590121
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||| |||||||||||||  |  |||||||||||||| ||| | ||||||    
T  51590061 gcaatcctcacctcacaagccggttttgtgggattgtgttaggcccaagcacgatttctaa 51590121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 52961603 - 52961655
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||||||||||||| ||||||||||| |  || ||||||||| |||||||    
T  52961603 gggcaatcctcacctcaaaagccggttttatggggttgtgttaggtccaacca 52961655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 9e-36; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 30727287 - 30727115
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||||  || ||||||||||||||||||| |||||| ||||||||||||||  |||||||| |||||||| | | ||| ||||||||||    
T  30727287 caccatttatatccacaaactaagcccaatagtgttgggcgtgagggggtgtgttaaagagtgacacatcggttgagaaatggccagaataagtgtttat 30727188  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
      |  |||||||||||||||||| |||| ||||||||  || |  ||||||||||||||||| ||||||||||    
T  30727187 aagtgggggcaatcctcacctcacaagctggttttgtacggttaagttaggcccaaccacaatttctaagaat 30727115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 47849707 - 47849867
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagac-tgaacaagtgttta 114  Q
    |||||||||||||||||||| |||| ||||||| |||||| ||| ||||||||||||||||||||||||||||| | | || ||| |||||  |||||||    
T  47849707 caccatttatatccacgcactaagctcaatagtattgggcgtgaaggtgtgtgttaaagagtcccacatcggataaaagat-gacatgaac--gtgttta 47849803  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaa 178  Q
    |  |  |||||||| ||||||||| ||||| |||||||  || |||| ||||||||||||||||    
T  47849804 taagttggggcaatactcacctcacaagccagttttgtggggttgtgctaggcccaaccacaaa 47849867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 1596744 - 1596913
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgttta 114  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||| ||||||||| |||||||||||||||||   || || | || ||||| || ||||    
T  1596744 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagagtgtgtgtt-aagagtcccacatcggacaggacatggcct-aacaatgttttta 1596841  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |  |  |||||||||||||||| | |||||||||||||  || |||||||||||||||||||| | ||||||    
T  1596842 taagtgggggcaatcctcaccttacaagccggttttgtagggttgtgttaggcccaaccacaattactaaga 1596913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 29469756 - 29469923
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| | |||||||||||||| ||| | |||||| ||||||| |||||||||||||||||   || || | ||||  | ||||||||    
T  29469756 caccatttatgtccacgaatcaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggacaggacatggcctgacaatgtgtttat 29469854  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
      |  |||||||||||||||| | |||||||||||||   | |||||||||||||||||| | ||||||    
T  29469855 aagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaa 29469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 33996247 - 33996120
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||||||  | |||||||||| ||| |||||||||||||||||| ||| || | ||||  | ||||||||    
T  33996247 caccatttatgtccacgaaccaagcccaatagtgttgatcgtgagggtgtgagtt-aagagtcccacatcggataagacattgtctgacaatgtgtttat 33996149  T
Q  116 gcgcaggggcaatcctcacctcataagcc 144  Q
     ||  ||| |||||||||||||| |||||    
T  33996148 acgtggggacaatcctcacctcacaagcc 33996120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 21861445 - 21861614
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||| ||||||| ||| | |||||| ||||||||| |||| ||||||||||   || || | ||||  | ||||||||    
T  21861445 caccatttatgtccacgaaccaagcctaatagtgctggtcgtgagggggtgtgttaa-gagttccacatcggacaggacatggcctgacaatgtgtttat 21861543  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||| | |||||| ||||||  || |||||||||||||||||| | ||||||||    
T  21861544 aagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccaccatttctaaga 21861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 48243220 - 48243071
Alignment:
Q  23 tatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcagg 122  Q
    |||||||||| ||||||| |||||||| ||| | |||||| ||||||||| |||||||||||| |||  ||  | | ||||  | ||||||||  |  ||    
T  48243220 tatatccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcagatatga--tggtctgacaatgtgtttataagtggg 48243124  T
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  48243123 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 48243071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 31892303 - 31892475
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgttta 114  Q
    |||||||||| |||||| ||||||||||||| || ||| | |||||| ||||||||| ||||| |||||||||||  | || |||   |||| || ||||    
T  31892303 caccatttatgtccacgaaccaagcccaataatgatggtcgtgagggggtgtgttaa-gagtctcacatcggatggaacat-gacatgacaatgtattta 31892400  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    |  |  ||| ||||| |||||||| |||||||||||||  || |||||||||||||||||| | |||||||||||    
T  31892401 taagtggggacaatcttcacctcacaagccggttttgtggggatgtgttaggcccaaccacgatttctaagaata 31892475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 40746286 - 40746348
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||||||||| ||||||  || |||||||||||||||||||| ||||||    
T  40746286 gggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaa 40746348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 21055017 - 21054952
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  21055017 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 21054952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 25620156 - 25620221
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  25620156 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 25620221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 34027413 - 34027476
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  34027413 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 34027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 40746200 - 40746032
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgttta 114  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| ||||||||||||||||||  || || | ||  |||| |||||||    
T  40746200 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggg-gtgtgtt-aagagtcccacatcggataggacat-ggctagacaatgtgttta 40746104  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |  | |||| ||||| |||||||| || ||| ||||||  |  |||||||| ||||||||||| ||||||||    
T  40746103 taagaagggacaatcttcacctcacaaaccgattttgtgggattgtgttagacccaaccacaatttctaaga 40746032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 32474520 - 32474586
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    |||||||||||||||||| |||||||||||||  |  || ||||||||||||||||| |||||||||    
T  32474520 ggggcaatcctcacctcacaagccggttttgtgggtttgcgttaggcccaaccacaatttctaagaa 32474586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3519893 - 3519821
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| ||||||||||||| || ||| | |||||| ||||||| ||||||||||||||||||    
T  3519893 caccatttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgtt-aagagtcccacatcggat 3519821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 4886349 - 4886414
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||| |  ||| |||||||||||||||||| | ||||||||    
T  4886349 ggggcaatcctcacctcacaagccggtttggcgaggttgtgttaggcccaaccacgatttctaaga 4886414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 6991779 - 6991840
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| |||||| ||||| | ||| |||||||||||||||||||| ||||||||    
T  6991779 caatcctcacctcttaagccagttttatgaggttgtgttaggcccaaccacaatttctaaga 6991840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 25620287 - 25620355
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    |||||||||| |||||| |||||||||||||||||||| | ||| |||||||||| |||||||| |||||    
T  25620287 caccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggtgtgtgtt-aagagtcctacatc 25620355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 31485723 - 31485658
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | ||||||||||||| | | ||||||||||| |||||||| ||||||||    
T  31485723 ggggcaatcctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaatttctaaga 31485658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 32292670 - 32292711
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcat 57  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  32292670 caccatatatatccacgcaccaagcccaatagtgttgggcat 32292711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 33834342 - 33834414
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||||||||||||||||| | ||| || ||| ||| ||||||||||||||||||    
T  33834342 caccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggggtgggtt-aagagtcccacatcggat 33834414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 47710463 - 47710528
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||| |||||||  || |||||||||||||||||| | ||||||||    
T  47710463 ggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaaga 47710528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 47722119 - 47722184
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||| |||||||  || |||||||||||||||||| | ||||||||    
T  47722119 ggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaaga 47722184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 32292484 - 32292603
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaa-atagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttag 165  Q
    |||||||||||| |||||||||| |||  || | ||||||||||||||||  |  |||||  ||||||||||| ||||||| |||||  || ||||| ||    
T  32292484 tgttaaagagtctcacatcggataagagtatggcctgaacaagtgtttataagtgggggcggtcctcacctcacaagccggatttgtggggttgtgt-ag 32292582  T
Q  166 gcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||||||    
T  32292583 gcccaaccaaaaattctaaga 32292603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 29469625 - 29469688
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||    
T  29469625 ggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 29469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 47849537 - 47849648
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    ||||||||||| ||||||||||| | | || |  |||||| ||||||||  |  |||||||||||||||||| || ||||||||||  |  |||||||||    
T  47849537 tgttaaagagtgccacatcggataaaagatggcatgaacatgtgtttataagttggggcaatcctcacctcacaacccggttttgtgggcttgtgttagg 47849636  T
Q  167 cccaaccacaaa 178  Q
    | ||||||||||    
T  47849637 ctcaaccacaaa 47849648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 48661619 - 48661556
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| ||||||||||||| ||  |||||||| ||||||||| | ||||||    
T  48661619 ggggcaatcctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaa 48661556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 2544511 - 2544457
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||||| ||| |||||||||  || ||||||||||||||||||    
T  2544511 ggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccac 2544457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 11211743 - 11211689
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||||| |||||||||||||  || |||||| |||||||||||    
T  11211743 ggggcaatcctcacctcacaagccggttttgtggggttgtgttgggcccaaccac 11211689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 23839141 - 23839079
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattcta 183  Q
    |||| ||||||||||||| ||||||||||||| ||| ||||||||||||| | |||| |||||    
T  23839141 ggggaaatcctcacctcacaagccggttttgtgaggttgtgttaggcccatcgacaatttcta 23839079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 32278945 - 32278895
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    ||||| |||||||||||||||||||||| ||| |||||||||| |||||||    
T  32278945 caatcgtcacctcataagccggttttgtgaggttgtgttaggctcaaccac 32278895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 34027647 - 34027713
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    |||||||||||||| ||| |||||||||||||  || |||||||||||||| ||| | |||||||||    
T  34027647 ggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaagaa 34027713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 49117168 - 49117338
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||| |||||||  |||||||||||||||| ||||  |||| | ||||| | ||||||||||||| |||| ||  || | ||| | |  |||||||    
T  49117168 caccatttttatccacagaccaagcccaatagtgatgggattgagcgggtgtggtgaagagtcccacattggataagtgatggcctggatagatgtttat 49117267  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |   ||||| ||||||||||| |||||| |||| |  |||| |||||||| |||||||||| |||||||    
T  49117268 aagtgagggcagtcctcacctcacaagccgcttttctggggctatgttaggctcaaccacaaactctaaga 49117338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 2404336 - 2404173
Alignment:
Q  21 tttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgca 120  Q
    ||||| |||||| ||||||| |||||||| ||| | |||| | ||||||||| |||||||||||||| |  || || ||||||  | ||||||||  |      
T  2404336 tttatgtccacgaaccaagcgcaatagtgctggtcgtgagag-gtgtgttaa-gagtcccacatcggttaggagatggactgacaatgtgtttataagtg 2404239  T
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| ||| || ||| |||||||    || |||||||||||||||||||| ||||||||    
T  2404238 ggggcaatcctaaccccacaagtcggtttttaagggttgtgttaggcccaaccacaatttctaaga 2404173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 3038148 - 3038095
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||| ||| |||||||||||||  || |||||||||||||||||    
T  3038148 ggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaacca 3038095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 6001603 - 6001531
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||||| |||| || ||| | |||||| ||||||||| ||||||||||||||||    
T  6001603 caccatttatttccacgaaccaagcctaataatgctggtcgtgagggagtgtgttaa-gagtcccacatcggat 6001531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 6634875 - 6634928
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||||||||||  |||||||  || |||||||||||||||||    
T  6634875 ggggcaatcctcacctcataagctagttttgtggggttgtgttaggcccaacca 6634928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 14540905 - 14540837
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||| |||||  |||||||||||||||| ||| |||||||||||||||| |||| || ||||||||||    
T  14540905 atttatgtccacaaaccaagcccaatagtgctggtcatgagggtgtgtgtt-aagaatcacacatcggat 14540837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 14541016 - 14540963
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||| ||||||||||| |||||||||  || |||||||||||||||||    
T  14541016 ggggcaatccacacctcataagtcggttttgtggggttgtgttaggcccaacca 14540963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 22574752 - 22574824
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| || ||| |||||||||||||||||||| | |||||  ||||||| ||||||| ||||||||||    
T  22574752 caccatttatgtctacgaaccaagcccaatagtgttggtcgtgaggtggtgtgtt-aagagtctcacatcggat 22574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 26239980 - 26239915
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||| |||| ||||  || |||||||| ||||||||||| ||||||||    
T  26239980 ggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaaga 26239915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 32879678 - 32879613
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||||   || ||||||||||||||| || | ||||||||    
T  32879678 ggggcaatcctcacctcacaagccggttttgcggggttgtgttaggcccaacgacgacttctaaga 32879613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 36277159 - 36277091
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| ||||||| ||||||    
T  36277159 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtctcacatc 36277091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 1936280 - 1936212
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    ||||||||| || ||| |||| ||||||||||||||| ||||| |  ||||||||||||||| ||||||    
T  1936280 accatttatgtcaacgaaccatgcccaatagtgttggtcatgaagaggtgtgttaaagagtcacacatc 1936212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 2315194 - 2315138
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaa 72  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||| |||| ||||    
T  2315194 caccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtattaa 2315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 21861315 - 21861379
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||| | |||||||||||||  |  |||||||||||||||||| | ||||||||    
T  21861315 gggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaaga 21861379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 22574856 - 22574920
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||| ||||||  ||||| ||  |||||||||||||||||| | ||||||||    
T  22574856 gggcaatcctcacctcacaagccgtatttgtgagtttgtgttaggcccaaccacgatttctaaga 22574920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 31485592 - 31485525
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacat 84  Q
    ||||||||||||||||| | ||| |||||||||||||  | |||||| ||||||| |||||||||||||    
T  31485592 caccatttatatccacgaatcaaacccaatagtgttgttcgtgagggggtgtgtt-aagagtcccacat 31485525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 22339663 - 22339604
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||| |||||| ||||||||||  ||||| ||||||||||||||| |||| ||||||    
T  22339663 caatcctaacctcacaagccggtttatttaggttgtgttaggcccaacgacaatttctaa 22339604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 44056639 - 44056678
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggc 55  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  44056639 caccatttatatccacgcatcaatcccaatagtgttgggc 44056678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 17202199 - 17202253
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||| |||| |||| |||||||||||||  || ||||||||||||||||||    
T  17202199 ggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaaccac 17202253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 18826421 - 18826352
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcg 86  Q
    ||||||||||  ||||| |||||||||||| ||||||| ||||||||  |||||| ||||||| |||||||    
T  18826421 caccatttatgaccacgaaccaagcccaattgtgttggtcatgaggggatgtgtt-aagagtctcacatcg 18826352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 26029022 - 26028972
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||||||||||| |||||| |||||| ||| |||||||| ||||||||    
T  26029022 gcaatcctcacctcacaagccgattttgtgaggttgtgttagacccaacca 26028972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 1596614 - 1596678
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | ||||||| |||||  || ||||||||||| |||||||| ||||||||    
T  1596614 ggggcaatcctcaccttacaagccgg-tttgtggggttgtgttaggcctaaccacaatttctaaga 1596678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 6782883 - 6782944
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||| | |||||||||||||  || |||||||||| ||||||| | ||||||    
T  6782883 ggcaatcctcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 6782944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 33996375 - 33996310
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||| ||| |||||||||   | |||||||||||||||||| | ||||||||    
T  33996375 ggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaaga 33996310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 36277290 - 36277225
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||| || ||||||  || |||||||| ||||||||| | ||||||||    
T  36277290 ggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaaga 36277225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 40746518 - 40746571
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||| ||||| ||||||| ||||| ||||||| ||| |||||||||||||||||    
T  40746518 ggggaaatccacacctcacaagccagttttgtgaggttgtgttaggcccaacca 40746571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 43688272 - 43688156
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||||||||||||||  || || | ||||  | ||||||||  |  ||||||||||| |||||  |||||||||| ||  || ||||||||||||||    
T  43688272 aagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatccttacctctcaagccggttt-gtggggttgtgttaggcccaa 43688174  T
Q  172 ccacaaattctaagaata 189  Q
    |||| | |||||||||||    
T  43688173 ccacgatttctaagaata 43688156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 48661488 - 48661451
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgg 53  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  48661488 caccatttatgtccacgaaccaagcccaatagtgttgg 48661451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 6787311 - 6787271
Alignment:
Q  15 tcaccatttatatccacgcaccaagcccaatagtgttgggc 55  Q
    |||| |||||||| |||||||||||| ||||||||||||||    
T  6787311 tcactatttatattcacgcaccaagctcaatagtgttgggc 6787271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 9689154 - 9689118
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggc 157  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  9689154 ggggaaatcctcacctcacaagccggttttgttaggc 9689118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 22339536 - 22339464
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    ||||||| || |||||| || ||||||||||||||||  | ||| || ||||||||||||||  |||||||||    
T  22339536 caccattaatgtccacgaacaaagcccaatagtgttgatcgtgaaggagtgtgttaaagagtttcacatcgga 22339464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 40898883 - 40898827
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaa 72  Q
    |||||||||| |||||| ||||||| ||||||||||||   ||| ||||||||||||    
T  40898883 caccatttatgtccacgaaccaagctcaatagtgttggctgtgacggtgtgtgttaa 40898827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 41191037 - 41191101
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
    ||||||||||| ||| ||||||||||||| ||  ||||||||| |||| ||||  ||||||||||    
T  41191037 gcaatcctcacatcacaagccggttttgtgagattgtgttaggtccaatcacagtttctaagaat 41191101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 48420786 - 48420738
Alignment:
Q  141 agccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    ||||||||||||  || |||| ||||||||||||| |||||||||||||    
T  48420786 agccggttttgtggggttgtgctaggcccaaccacgaattctaagaata 48420738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 38476194 - 38476363
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||||   | |||||||||||||| | ||||| || | ||||| ||||||||||    
T  38476194 caccatttatatccacgcacctagcccaatggttttgggcatgagggtgtgg--tgaagagtcccacatcagttgagagatggcctgaataagtgtttat 38476291  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |  |||| ||||||||||||| |||||| ||||||  || ||||||||| | ||||||||||||||||||    
T  38476292 aagtgggggaaatcctcacctcacaagccgattttgtggggttgtgttaggactaaccacaaattctaagaa 38476363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 8466656 - 8466535
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| || |||| ||||||| ||||||||||||| ||| || | ||||||||||||||||    
T  8466656 caccatttatatgcacgcaccaagcccaatagtgatgggcatgaaggggtgt-ttaaagaatcccacatcggataagagatggtctgaacaagtgtttat 8466558  T
Q  116 gcgcaggggcaatcctcacctca 138  Q
      |  |||| |||||||||||||    
T  8466557 aagtgggggaaatcctcacctca 8466535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 11232362 - 11232193
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| |||||||||||||||||   || || | ||||  | ||||||||    
T  11232362 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggacaggacatggcctgacaatgtgtttat 11232264  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||||    
T  11232263 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 11232193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 26208181 - 26208013
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||||| || |  ||||| | |||||||||| || ||||||||||||||||||| |||||||| |||||| |  |||  ||| |||||| ||||    
T  26208181 caccatttatattcatgtgccaagtctaatagtgttgtgcgtgagggtgtgtgttaaagattcccacattggatgatagttagtatgagcaagtgcttat 26208082  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
      || | |||| || ||||||||||||||||||||||  || | |||||||||||||||||| ||||||    
T  26208081 aggcggaggcattcatcacctcataagccggttttgtggggttatgttaggcccaaccacaatttctaa 26208013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 38475721 - 38475832
Alignment:
Q  75 agtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||||||||| ||| | || |  |||||||||||||||  |  |||||||||||||||||| |||||||||||||  || |||||||||||||||||    
T  38475721 agtcccacatcggttgaaagatggcttgaacaagtgtttataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaacca 38475820  T
Q  175 caaattctaaga 186  Q
    ||||||||||||    
T  38475821 caaattctaaga 38475832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 39960108 - 39960277
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| | ||||||| ||||||||||||||||  || || | ||||| |  |||||||    
T  39960108 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg-gtgttaa-gagtcccacatcggataggagatggcctgaaaatttgtttat 39960205  T
Q  116 gcgcagggg-caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||| |||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  39960206 aagtggggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 7729897 - 7730009
Alignment:
Q  57 tgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttagg 156  Q
    ||||||||||||||||||||||||||||| |||  || || | |||| || ||||||||  |  |||||||||||||||||| ||||||||||||| |||    
T  7729897 tgagggtgtgtgttaaagagtcccacatcagatatgagatggcctgaccatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtaagg 7729996  T
Q  157 ctgtgttaggccc 169  Q
     || |||||||||    
T  7729997 atgagttaggccc 7730009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 37868001 - 37867865
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||| ||||||||||||| | ||||||||||||||||||||||  ||||||||  |   ||   ||||||| ||||||||    
T  37868001 caccatttatgtccacgaaccaaggccaatagtgttggtcgtgagggtgtgtgttaaagagtctaacatcggacaaatgatgacctgaacacgtgtttat 37867902  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgt 152  Q
      |  |||||||| ||||||||| |||||||||||||    
T  37867901 tagtgggggcaattctcacctcacaagccggttttgt 37867865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 37868241 - 37868105
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| ||||||  ||||||||||||||||||| | ||||||||||||||||||||||  ||||| ||  |   || | ||||||| ||||||||    
T  37868241 caccatttatgtccacgagccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtctaacatcagacaaatgatggcctgaacacgtgtttat 37868142  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgt 152  Q
      |  ||||||||||||||| || |||||||||||||    
T  37868141 tagtgggggcaatcctcaccacacaagccggttttgt 37868105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 27204984 - 27205051
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| | ||||||||||    
T  27204984 ggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagaat 27205051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 27205082 - 27205149
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| | ||||||||||    
T  27205082 ggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagaat 27205149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 27205180 - 27205245
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| | ||||||||    
T  27205180 ggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 39052862 - 39052790
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||| ||||||| ||||||||||||||||||    
T  39052862 caccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcggat 39052790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 5590432 - 5590369
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  5590432 ggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaa 5590369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 29907860 - 29907761
Alignment:
Q  51 tgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggtttt 150  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||| ||||  | ||||||||  |  ||| |||||||||||||| ||| |||||||    
T  29907860 tgggtatgagggtgtgtgttaaagagtcccacatcggataagagatagtctgacaatgtgtttataagtggggtcaatcctcacctcacaagtcggtttt 29907761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 35682949 - 35682779
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| ||||||| |||||||| ||| | ||||||   ||||||| |||| ||||||||||   || || | ||||  | ||||||||    
T  35682949 caccatttatgtccacgaaccaagctcaatagtgctggtcgtgaggggtggtgttaa-gagttccacatcggacaggacatggcctgacaatgtgtttat 35682851  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |  |||||||||||||||||  |||||||||||||  || |||||||||||||||||| | |||||||||    
T  35682850 aagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagaa 35682779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 4828313 - 4828375
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattcta 183  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||||| |||||    
T  4828313 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 4828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 22638295 - 22638177
Alignment:
Q  69 ttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcc 168  Q
    |||||||||| |||||||||| ||| || | |||   ||||||||||  | |||||||||||||||| || |||||||||||||  || ||||||| |||    
T  22638295 ttaaagagtctcacatcggataagagatggcctgtcaaagtgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgttaagcc 22638196  T
Q  169 caaccacaaattctaagaa 187  Q
    ||||||| | |||||||||    
T  22638195 caaccacgatttctaagaa 22638177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 39052705 - 39052637
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||| ||||||| ||||||||||||||    
T  39052705 caccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatc 39052637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 6541935 - 6542003
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    |||| ||||||||||||| |||||||||||||  |  |||||||||||||||| |||||||||||||||    
T  6541935 ggggtaatcctcacctcacaagccggttttgtgggtttgtgttaggcccaaccgcaaattctaagaata 6542003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 8929037 - 8929101
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaag 185  Q
    |||||||||| ||||||| |||||||||||||  || |||||||||||||||||| |||||||||    
T  8929037 ggggcaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaag 8929101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 10615095 - 10615035
Alignment:
Q  29 cacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||| |||||| |||||||||||||   |||||||||||||||||||||||||||||||||    
T  10615095 cacgaaccaagtccaatagtgttggttgtgagggtgtgtgttaaagagtcccacatcggat 10615035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 37868516 - 37868381
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| | |||| ||||||||||||| || ||| | |||||| | |||||||||||||  ||||||||| |   || | ||||||| ||||||||    
T  37868516 caccatttatgtacacgaaccaagcccaatattgctggtcgtgaggggg-gtgttaaagagtcgaacatcggataaatgatggcctgaacacgtgtttat 37868418  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgt 152  Q
      |  |||||||||||||||||| |||||||||||||    
T  37868417 tagtgggggcaatcctcacctcacaagccggttttgt 37868381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 42846668 - 42846604
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  42846668 gggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 44931296 - 44931204
Alignment:
Q  71 aaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgtt 163  Q
    ||||||||||||||||| ||||| || | ||||| ||||||||||  |  |||||||||||| ||||| ||||||||||||| ||| ||||||    
T  44931296 aaagagtcccacatcggttgagagatggcctgaataagtgtttataagtgggggcaatcctcgcctcacaagccggttttgtaaggatgtgtt 44931204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 8084278 - 8084447
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgttta 114  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| ||||||||||||||| |  ||| || | || ||||| || ||||    
T  8084278 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcgaacaagacatggcct-aacaatgtattta 8084375  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |  |  |||| || |||||||||| || || ||||||| ||| ||||||||| |||||||| | ||||||||    
T  8084376 taagtgggggtaaacctcacctcacaaaccagttttgtgaggttgtgttaggtccaaccacgatttctaaga 8084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 19256650 - 19256587
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  19256650 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 24075370 - 24075307
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  24075370 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 26800576 - 26800514
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattcta 183  Q
    ||||||||||||||| || |||||||||||||  || |||||||||||||||||||| |||||    
T  26800576 ggggcaatcctcaccacacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 26800514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 35385875 - 35385809
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    ||||||||||||||||||||||||||||||||  || ||||||| || ||||||| | |||||||||    
T  35385875 ggggcaatcctcacctcataagccggttttgtggggttgtgttaagctcaaccaccatttctaagaa 35385809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 37001194 - 37001300
Alignment:
Q  69 ttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcc 168  Q
    |||||||||||||||||| | |||| || | || |  ||||||||||  |  |||||||||||||||||| |||||||||||||   | |||||||||||    
T  37001194 ttaaagagtcccacatcgaacgagagatggcctcacaaagtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcc 37001293  T
Q  169 caaccac 175  Q
    |||||||    
T  37001294 caaccac 37001300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 37001427 - 37001549
Alignment:
Q  64 gtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgtt 163  Q
    |||| |||||||||| |||||||||   ||||| | ||||  ||||||||||  |  ||| |||||||||| ||| |||||||||||||  || ||||||    
T  37001427 gtgttttaaagagtctcacatcggacaggaaatggcctgacaaagtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgtt 37001526  T
Q  164 aggcccaaccacaaattctaaga 186  Q
    |||||||||||| | ||||||||    
T  37001527 aggcccaaccacgatttctaaga 37001549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3157177 - 3157105
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| ||||||| ||||||||||    
T  3157177 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtctcacatcggat 3157105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 10884085 - 10884149
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||| | || |||||||||||||||||| | ||||||||    
T  10884085 ggggcaatcctcacctcacaagccggttttg-tgggttgtgttaggcccaaccacgatttctaaga 10884149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 11232493 - 11232428
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||||    
T  11232493 ggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 11232428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 18004160 - 18004107
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||    
T  18004160 ggggcaatcctcaccccataagtcggttttgtgaggttgtgttaggcccaacca 18004107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 18939361 - 18939296
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||| | |||||| ||| |||||||||||||||||| | ||||||||    
T  18939361 ggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccaccatttctaaga 18939296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 20301281 - 20301346
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| |||||| ||||| ||||||| ||| |||||||||||||||||| | ||||||||    
T  20301281 ggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaaga 20301346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 21087913 - 21087978
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| |||||| ||||| ||||||| ||| |||||||||||||||||| | ||||||||    
T  21087913 ggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaaga 21087978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 31079728 - 31079603
Alignment:
Q  19 catttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcg 118  Q
    ||||||| |||||| |||||||||||||| | ||| | |||||  |||||||||||||||||||||||| | | | || |  |||||| ||||||||  |    
T  31079728 catttatgtccacgaaccaagcccaatagggatggtcgtgaggaggtgtgttaaagagtcccacatcgggtaaaatatggcttgaacatgtgtttataag 31079629  T
Q  119 caggggcaatcctcacctcataagcc 144  Q
      | |||||||||||||||| |||||    
T  31079628 tggaggcaatcctcacctcacaagcc 31079603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 39052993 - 39052928
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || ||||||||||||||| || | ||||||||    
T  39052993 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaaga 39052928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 41790683 - 41790743
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||||||||||||| | || |||||||||||||||||| | ||||||||    
T  41790683 caatcctcacctcataagccggttttg-tgggttgtgttaggcccaaccacgatttctaaga 41790743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 5932013 - 5931945
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    |||||||||||||||||| |||||||||||||  || | |||||||||||||||| | || ||||||||    
T  5932013 ggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccaccatttttaagaata 5931945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 10450021 - 10450085
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||| |||||||||||||  || |||||||||| ||||||| | ||||||||    
T  10450021 gggcaatcctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaaga 10450085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 45031425 - 45031373
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacc 173  Q
    |||||||||||||||| | ||||||||||||| ||| ||||||||||||||||    
T  45031425 ggggcaatcctcaccttacaagccggttttgtaaggttgtgttaggcccaacc 45031373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 17469838 - 17469901
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||| ||||||| | ||||||    
T  17469838 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 17477085 - 17477148
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||| ||||||| | ||||||    
T  17477085 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 19256884 - 19256821
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||| ||||||||  || |||||||||||||||||| | ||||||    
T  19256884 ggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaa 19256821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 38447545 - 38447442
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    ||||||||| ||||||| ||||| ||| || | ||||  | ||||||||  |  |||||||||||||||||| |||||||||||||  || |||||||||    
T  38447545 tgttaaagaatcccacaacggataagagatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 38447446  T
Q  167 ccca 170  Q
    ||||    
T  38447445 ccca 38447442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 38475885 - 38475924
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggc 55  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  38475885 caccatttatatccacgcaccaagtccaatagtgttgggc 38475924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 39743549 - 39743612
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||| ||||||  || |||||||||||||||||| | ||||||    
T  39743549 ggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 44694754 - 44694699
Alignment:
Q  140 aagccggttttgttaggctgtgttaggcccaaccacaaattctaagaataatattt 195  Q
    ||||| |||||||  || |||||||||||||||||||||||||||||| |||||||    
T  44694754 aagccagttttgtggggttgtgttaggcccaaccacaaattctaagaagaatattt 44694699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 4828092 - 4828142
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  4828092 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 4828142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 10615549 - 10615615
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcg 86  Q
    |||||| |||||| |||||| ||||||||| | | | ||||||||||||||||||||||| ||||||    
T  10615549 atttatctccacgaaccaagtccaatagtgctagtcgtgagggtgtgtgttaaagagtcctacatcg 10615615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 20094728 - 20094659
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcg 86  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| | ||||| |||||||||||||||    
T  20094728 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggcgtgtt-aagagtcccacatcg 20094659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 24532534 - 24532432
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||||||||||||||  || || | ||||  | ||||||||  |  ||||||||| |||||||| |||||||||||||  || ||||||||||||||    
T  24532534 aagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaa 24532435  T
Q  172 cca 174  Q
    |||    
T  24532434 cca 24532432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 4963384 - 4963437
Alignment:
Q  131 tcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||| |||||||||||||  || |||||||||||||||||||| ||||||    
T  4963384 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 4963437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 6559513 - 6559448
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | ||||||||||||| ||| | |||| | |||||||||||||| |||||    
T  6559513 ggggcaatcctcaccttacaagccggttttgtgaggttatgttcgtcccaaccacaaattttaaga 6559448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 10454450 - 10454511
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| |||||||||||||  || |||||||||| ||||||| | ||||||||    
T  10454450 caatcctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaaga 10454511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 12022506 - 12022386
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    |||||||||||||||||| |||| |||  | | || |||||||||||||  | || || ||||||||||| | ||||| ||||||   || |||||||||    
T  12022506 tgttaaagagtcccacattggataagaggtggcctcaacaagtgtttataagtagcggaaatcctcaccttacaagccagttttgcggggatgtgttagg 12022407  T
Q  167 cccaa--ccacaaattctaag 185  Q
    |||||  ||||||||||||||    
T  12022406 cccaagtccacaaattctaag 12022386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 12317066 - 12317131
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||||||||| | ||||||  |  |||||||||||||||||| | ||||||||    
T  12317066 ggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaaga 12317131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 12547118 - 12547183
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||| |||||||||||||  || ||||||||||||||| || | ||||||||    
T  12547118 ggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 12547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 12688223 - 12688295
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| || ||||||||||||| ||| |||||||| ||||| | ||||||||||||| ||||    
T  12688223 caccatttatgtccacgaactaagcccaatagtgatggtcatgagggggtgtgat-aagagtcccacattggat 12688295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 20301412 - 20301484
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| || ||| |||||||||||||||| ||| | |||||| ||||||| |||||| |||||||||||    
T  20301412 caccatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtaccacatcggat 20301484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 21088044 - 21088116
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| || ||| |||||||||||||||| ||| | |||||| ||||||| |||||| |||||||||||    
T  21088044 caccatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtaccacatcggat 21088116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 42049751 - 42049686
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||| || ||||||||||||| ||| |||| |||||| |||||| | ||||||||    
T  42049751 ggggcaatcctcaccccacaagccggttttgtgaggttgtggtaggcctaaccacgatttctaaga 42049686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 8849335 - 8849395
Alignment:
Q  18 ccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtc 78  Q
    ||||||||||| | | ||||| |||||||||||||| | |||||| |||||||||||||||    
T  8849335 ccatttatatctatgaaccaaacccaatagtgttggtcgtgagggggtgtgttaaagagtc 8849395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 20702817 - 20702861
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttag 165  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||    
T  20702817 ggggcaatcctcatctcataagccggttttgtgaggttgtgttag 20702861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 7267529 - 7267466
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||| |||||||| |||||||||||||  || |||||||| ||||||||| | ||||||    
T  7267529 ggggcaatcatcacctcacaagccggttttgtagggttgtgttagacccaaccaccatttctaa 7267466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 8466842 - 8466723
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    |||||||||||| |||||||||| ||| || |  ||||| |||||||||  |  ||| |||||||||||||| |||| |||||| |  || |||||  |     
T  8466842 tgttaaagagtctcacatcggataagagatggcatgaacgagtgtttataagtggggacaatcctcacctcacaagctggttttatggggttgtgtacga 8466743  T
Q  167 cccaaccacaaattctaaga 186  Q
    ||||||||||| ||||||||    
T  8466742 cccaaccacaatttctaaga 8466723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 8716136 - 8716187
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||||||||||||||||||| ||||||  || |||||||| ||||||||    
T  8716136 ggcaatcctcacctcataagccgattttgtggggttgtgttagacccaacca 8716187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 34842698 - 34842761
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||||| | |||||||||  || |||||||||| ||||||| | ||||||    
T  34842698 ggggcaatcctcacctcataggtcggttttgtggggttgtgttaggctcaaccacgatttctaa 34842761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 38475988 - 38476027
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggc 55  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  38475988 caccatttatatccatgcaccaagtccaatagtgttgggc 38476027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 422514 - 422452
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||| ||| ||||||||||| ||||||  || |||||| ||||||||||||| ||||||||    
T  422514 gcaatcatcagctcataagccgattttgtggggttgtgtttggcccaaccacaatttctaaga 422452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 3157623 - 3157569
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||||| ||||| |||||||  || |||||||||| |||||||    
T  3157623 ggggcaatcctcacctcacaagccagttttgtggggttgtgttaggctcaaccac 3157569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 5932248 - 5932194
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    ||||||| |||||||||| ||||| |||||||  || ||||||||||||||||||    
T  5932248 ggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccac 5932194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 3157390 - 3157326
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||| | ||||||  || |||||||||||||||||| | ||||||||    
T  3157390 ggggcaatcctcacctcacaagctg-ttttgtggggttgtgttaggcccaaccaccatttctaaga 3157326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3157492 - 3157420
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||| | ||||||| ||||||| ||||| ||||    
T  3157492 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagtgggtgtgtt-aagagtctcacatgggat 3157420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 15042950 - 15042885
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| ||||| ||| ||||||||||  || ||||||||||| |||||| | ||||||||    
T  15042950 ggggcaatccttacctcgtaaaccggttttgtggggttgtgttaggcctaaccacgatttctaaga 15042885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 5711607 - 5711436
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| |||||||||||||||||   ||||| | ||||  | ||||||||    
T  5711607 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggaaaggaaatggcctgacaatgtgtttat 5711509  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
      |  |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||||||    
T  5711508 aagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagaat 5711436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 21383454 - 21383284
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat---- 115  Q
    ||||||||||||||||||||| |||||||| ||||  |||||| ||||||||||||||||| |||||||| | | |||| ||||||| ||||||||        
T  21383454 atttatatccacgcaccaagcacaatagtggtgggtgtgagggggtgtgttaaagagtcccgcatcggataaaagatagtctgaacacgtgtttatataa 21383355  T
Q  116 gcgcaggggcaatcctcacctcataagccgg--ttttgttaggctgtgttaggcccaaccacaaattctaag 185  Q
    | |  |||||||||||||||||| |||||||  ||||||  || |||||||||||||||||||| |||||||    
T  21383354 gtg-gggggcaatcctcacctcacaagccggttttttgtggggttgtgttaggcccaaccacaatttctaag 21383284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 16419418 - 16419587
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| ||||||| |||||||| ||| | |||||| ||||||||| ||||||||||||||||  || || | ||||  | ||||||||    
T  16419418 caccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggataggacatggtctgacaatgtgtttat 16419516  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  16419517 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 40379377 - 40379208
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||||| ||||||||||| |||| ||| | |||||  ||||||||| ||||||||||||||||  |  || | ||||    ||||||||    
T  40379377 caccatttatatccacgaaccaagcccaaaagtgctggtcgtgaggaggtgtgttaa-gagtcccacatcggataggtgatggcctgacagtgtgtttat 40379279  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  40379278 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 2029920 - 2030089
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| |||||||||||||||||   || ||   ||||  | ||||||||    
T  2029920 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggacatgacatgacctgacaatgtgtttat 2030018  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  | |||||||||||||||| |||||||||||||  || ||| |||||||||||||| | ||||||||    
T  2030019 aagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaaga 2030089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 33606222 - 33606087
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||| ||||||| ||| | |||||  ||||||||| ||||||||||||||||  || || | ||||| | ||||||||    
T  33606222 caccatttatgtccacgaaccaagcctaatagtgatggtcgtgaggtggtgtgttaa-gagtcccacatcggataggagatggcctgaaaatgtgtttat 33606124  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgt 152  Q
      | ||||||||||||||||||| || ||||||||||    
T  33606123 aagtaggggcaatcctcacctcacaaaccggttttgt 33606087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 13210678 - 13210841
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||| | |||| |||||||| |||||||||||| | |||||| ||||||||||||||||||||| |||||||| ||   | |||||||   | ||    
T  13210678 caccatttacacccacacaccaagctcaatagtgttgg-cgtgagggggtgtgttaaagagtcccacattggatgagagatgacccgaacaagaagtgat 13210776  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
           || ||||||||||||||| ||| ||||| |  | |||||||||||||||||||||||||||||||    
T  13210777 -------ggaaatcctcacctcatatgccagttttttgggactgtgttaggcccaaccacaaattctaagaa 13210841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 13210492 - 13210611
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    |||||||||||||||||| | |||||| || | |||||| | |||||||  |   ||||||||||||||||| | | |||||||||  ||  ||||||||    
T  13210492 tgttaaagagtcccacattgaatgagagatggcctgaacgaatgtttataagagagggcaatcctcacctcacaggtcggttttgtggggtcgtgttagg 13210591  T
Q  167 cccaaccacaaattctaaga 186  Q
    ||||||||||||||||||||    
T  13210592 cccaaccacaaattctaaga 13210611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 17719420 - 17719485
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||| ||||||||||||| ||||||||    
T  17719420 ggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaaga 17719485  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 40379508 - 40379443
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  40379508 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379443  T

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Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 31001915 - 31001839
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgaga 93  Q
    |||||||||||||||| |||||||||||||||| |||||||||  | |||||||| ||| || |||||||| |||||    
T  31001915 accatttatatccacgaaccaagcccaatagtgatgggcatgaatgggtgtgttagagaatctcacatcggttgaga 31001839  T

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Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 2324260 - 2324314
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  2324260 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 2324314  T

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Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 8227320 - 8227434
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||| ||||| |||||||| || |  |||||||||||||||  |  |||||||||||||||| |  || |||||||||  || | |||||| |||||    
T  8227320 aagagtcacacattggatgagagatggcatgaacaagtgtttataagtgggggcaatcctcaccttacgaggcggttttgtagggttatgttagtcccaa 8227419  T
Q  172 ccacaaattctaaga 186  Q
    |||||||||||||||    
T  8227420 ccacaaattctaaga 8227434  T

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Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 15124716 - 15124545
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaa-atagactgaacaagtgttta 114  Q
    |||||||||| |||||| |||||| ||||||||| |||   ||||||  |||||||| |||||||||||||||| |||| || | ||||  |  ||||||    
T  15124716 caccatttatgtccacgaaccaagtccaatagtgctggttgtgaggggatgtgttaa-gagtcccacatcggat-agaacatggtctgacaatatgttta 15124619  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
    |  |  |||||||||| |||||||||||||| ||||||  || |||||||| ||||||||| | || |||||||    
T  15124618 taagtgggggcaatccccacctcataagccgattttgtggggttgtgttagacccaaccacgatttttaagaat 15124545  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 28407857 - 28407792
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||   | |||||||||||||||||| | ||||||||    
T  28407857 ggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaaga 28407792  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 14466343 - 14466272
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| |||||| ||||||||||    
T  14466343 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagttccacatcgga 14466272  T

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Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 19571093 - 19570973
Alignment:
Q  66 gtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttag 165  Q
    ||||||||||||| |||||||||  |  |||  |||||||| ||||||||  |  |||||||||||||||||||||| || ||||||     ||||||||    
T  19571093 gtgttaaagagtctcacatcggacaaataatgaactgaacatgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttag 19570994  T
Q  166 gcccaaccacaaattctaaga 186  Q
    |||||||||| | ||||||||    
T  19570993 gcccaaccacgatttctaaga 19570973  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 2029791 - 2029854
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| |||||||||||||  || ||| |||||||||||||| | ||||||||    
T  2029791 ggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaaga 2029854  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 19191670 - 19191611
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  19191670 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19191611  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 29718349 - 29718412
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaag 185  Q
    ||||||||||||||||| |||||||||||||  || ||||||||||| |||||| | |||||||    
T  29718349 gggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaag 29718412  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 32884127 - 32884178
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaac 172  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||    
T  32884127 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 32884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 44529772 - 44529733
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggc 55  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  44529772 caccatttatattcacgcaccaagcccaatagtgttgggc 44529733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 2324494 - 2324548
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||||| |||||||||||||  || |||||||||| |||||||    
T  2324494 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccac 2324548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 14466471 - 14466409
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||||    
T  14466471 gcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 14466409  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 37770007 - 37769953
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    ||||||||| ||||||||||||||||||||||  || |||||||| |||||||||    
T  37770007 ggggcaatcttcacctcataagccggttttgtggggttgtgttagacccaaccac 37769953  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 5711739 - 5711674
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||| | |||||||||||||  || |||||||||||||||||| | ||||||||    
T  5711739 ggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 5711674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 16533463 - 16533611
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||| ||||||||| ||| | |||| | ||||||||| |||||| ||| |||||  |  || | ||||  | ||||||||    
T  16533463 caccatttatgtccacgaaccaaggccaatagtgctggtcgtgagagggtgtgttaa-gagtcctacaccggataggtgatggcctgacaatgtgtttat 16533561  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttag 165  Q
      |  |||||||||||||| ||| ||||||||||||| ||| ||||||||    
T  16533562 aagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttag 16533611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 17719586 - 17719651
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| |||||| || ||||||||||  || |||||||||||||||||| | ||||||||    
T  17719586 ggggcaatcctgacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaga 17719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 27897670 - 27897605
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||| ||||||||| ||| |||||||||  || |||||||||||||||||| | ||||||||    
T  27897670 ggggcaattctcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaaga 27897605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 5450544 - 5450492
Alignment:
Q  131 tcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattcta 183  Q
    |||||||| |||||||||||||  || ||| ||||||||||||||||||||||    
T  5450544 tcacctcacaagccggttttgtggggttgtcttaggcccaaccacaaattcta 5450492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 17525267 - 17525196
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||| | |||||||||| |||| |||||||||    
T  17525267 caccatttatgtccacgaaccaagcccaatagtgatggtcgtgagtgggtgtgttaaa-agtctcacatcgga 17525196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 21591802 - 21591866
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaag 185  Q
    ||||||||| |||||||||||| ||||||| |  || |||||||||||||||||| | |||||||    
T  21591802 ggggcaatcttcacctcataagtcggttttatggggttgtgttaggcccaaccacgatttctaag 21591866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 24396014 - 24396088
Alignment:
Q  16 caccatttatatccacgcaccaagccc--aatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||| | |||||||||  ||| ||||||| |||||||| ||||||||| ||||||||||||||||    
T  24396014 caccatttatgtccatgaaccaagcccccaatggtgttggtcatgagggggtgtgttaa-gagtcccacatcggat 24396088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 37812431 - 37812364
Alignment:
Q  21 tttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    ||||| |||||| ||||||||||||| || ||| | |||||| ||||||| ||||||||||||||||||    
T  37812431 tttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgtt-aagagtcccacatcggat 37812364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 93784 - 93737
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcc 168  Q
    |||||||||||||||||| ||||||||||||| ||| || ||||||||    
T  93784 ggggcaatcctcacctcacaagccggttttgtgaggatgagttaggcc 93737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 2464784 - 2464847
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcc 79  Q
    |||||||||| |||||| ||||||| |||||||| ||  |||||| | ||||||||||||||||    
T  2464784 caccatttatgtccacgaaccaagctcaatagtgatgatcatgagagcgtgtgttaaagagtcc 2464847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 37840359 - 37840422
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||| |||||||| |||||||||||||  || |||||| ||||||||||||| || |||||    
T  37840359 ggcaatcatcacctcacaagccggttttgtggggttgtgttgggcccaaccacaatttttaaga 37840422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 93833 - 93791
Alignment:
Q  29 cacgcaccaagcccaatagtgttgggcatgagggtgtgtgtta 71  Q
    ||||||||||||||||||||||||| ||||||||  |||||||    
T  93833 cacgcaccaagcccaatagtgttggtcatgagggaatgtgtta 93791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 16419294 - 16419352
Alignment:
Q  128 tcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| |||||||||||||  || ||| |||||||||||||| | ||||||||    
T  16419294 tcctcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaaga 16419352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 17854992 - 17854930
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||||| |||||||||||||  || |||| ||| ||||||||| | ||||||    
T  17854992 gggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaa 17854930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 40010031 - 40010077
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    |||||||||||||| | ||||||||||||| ||| ||||||||||||    
T  40010031 ggcaatcctcaccttacaagccggttttgtaaggatgtgttaggccc 40010077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 41069261 - 41069327
Alignment:
Q  19 catttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    ||||||| |||||| ||||||| |||||||  ||| | |||||| ||||||||||||||||| ||||    
T  41069261 catttatgtccacgaaccaagctcaatagtactggtcgtgagggagtgtgttaaagagtcccgcatc 41069327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 878042 - 878075
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtg 49  Q
    ||||||||||||||||||||||||| ||||||||    
T  878042 caccatttatatccacgcaccaagctcaatagtg 878075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 5509099 - 5509152
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||| ||||||||||||| |||| ||||||||  || |||||||||||||||||    
T  5509099 ggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaacca 5509152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 14927122 - 14927187
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||||||| | | |||||  || |||||||||| ||||||| | ||||||||    
T  14927122 ggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaaga 14927187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 21383598 - 21383529
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    ||||||||||| |||||||||  ||||||| ||||| |||| | |||||| ||||| |||||||| ||||    
T  21383598 atttatatccaggcaccaagcttaatagtggtgggcgtgagtgggtgtgtcaaagaatcccacattggat 21383529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 27897561 - 27897504
Alignment:
Q  127 atcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||| ||||||||||| | ||| |||||||||| ||||||| | ||||||    
T  27897561 atcctcacctcacaagccggttttatgaggttgtgttaggctcaaccaccatttctaa 27897504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 33456018 - 33456078
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||| | || |||||||||| ||| || ||||||||||||| ||||||||||    
T  33456018 ggcaatcctcaccttacaaaccggttttgtaaggttgagttaggcccaacc-caaattctaa 33456078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 36352223 - 36352158
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||| |||||||||||||  || |||||||||  ||||||||| || |||||    
T  36352223 ggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaaga 36352158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 93511 - 93463
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    |||||||||||||||||| ||||||||||||| ||| || |||| ||||    
T  93511 ggggcaatcctcacctcacaagccggttttgtgaggatgagttatgccc 93463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 10523209 - 10523241
Alignment:
Q  57 tgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||| ||||||||||||||||||||||||||    
T  10523209 tgagggagtgtgttaaagagtcccacatcggat 10523241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 27036466 - 27036426
Alignment:
Q  134 cctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  27036466 cctcataagccggttttgtagggttgtgttaggcccaacca 27036426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 4868745 - 4868575
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||||| |||||||||||||||   || || | ||||  | ||||||||    
T  4868745 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggacaggacatggcctgacaatgtgtttat 4868647  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |  |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | |||||||||    
T  4868646 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagaa 4868575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 12330112 - 12329954
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgttta 114  Q
    |||||||||| |||||| ||||||||||||  || ||| | |||||| ||||||||| |||||||||||||||| ||| || ||   ||||| |||||||    
T  12330112 caccatttatgtccacgaaccaagcccaattatgctggtcgtgagggggtgtgttaa-gagtcccacatcggataagatat-gatataacaatgtgttta 12330015  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |  |  |||||||||||||||||| |||| | |||||| ||| ||||||||||||||||||    
T  12330014 taagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccac 12329954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 17147828 - 17147659
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| |||   |||||| ||||||| ||||||||||||||||||  || ||   ||||  | || |||||    
T  17147828 caccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgtt-aagagtcccacatcggataggacatgacctgacaatgtatttat 17147730  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||||| |||||||||||||  || | ||||||| |||||||| | ||||||||    
T  17147729 aagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggtccaaccaccatttctaaga 17147659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 9705188 - 9705339
Alignment:
Q  34 accaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaa-gtgtttatgcgcaggggcaatcctc 132  Q
    |||||| ||||||||| ||| | |||||| ||||||||| ||||||||||||||||  || || | || ||||| ||||||||  |  ||||||||||||    
T  9705188 accaagtccaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggataggacatgg-cttaacaatgtgtttataagtgggggcaatcctc 9705285  T
Q  133 acctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||| |||||||||||||  || |||||||| ||||||||| | ||||||||    
T  9705286 acctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 11721925 - 11721990
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| | ||||||||    
T  11721925 ggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 11721990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 25065159 - 25065087
Alignment:
Q  120 aggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaataata 192  Q
    ||||||||||||||||||| |||||||||||||  || ||||||||||||||| || | ||||||||||||||    
T  25065159 aggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaagaataata 25065087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 30256730 - 30256895
Alignment:
Q  18 ccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgc 117  Q
    |||||||| |||||| || |||||||| |||||||| | ||| || ||||||| ||||||||||||||||||  |  ||   ||||  |  |||||||      
T  30256730 ccatttatgtccacgaactaagcccaacagtgttggtcgtgatggggtgtgtttaagagtcccacatcggataggtgatgacctgacaatatgtttataa 30256829  T
Q  118 gcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |  |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  30256830 gt-ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 30256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 4868877 - 4868812
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  4868877 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 8001614 - 8001549
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||||||| || ||||||| || |||||||||||||||||||| ||||||||    
T  8001614 ggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaatttctaaga 8001549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 33494559 - 33494624
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  33494559 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 33494624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 8026624 - 8026692
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | |||||| ||||    
T  8026624 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaataata 8026692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 13353352 - 13353423
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| |||||||||||||||||    
T  13353352 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcgga 13353423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 33796477 - 33796548
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcgga 88  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| |||||||||||||||||    
T  33796477 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcgga 33796548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 8026409 - 8026472
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  8026409 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 12330243 - 12330180
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||| | ||||||    
T  12330243 ggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaa 12330180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 12330355 - 12330292
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||| | ||||||    
T  12330355 ggggcaatcctcatctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaa 12330292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 27656478 - 27656541
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||| ||||||||||||| |||||||||||||  || |||||||||||||||||||| ||||||    
T  27656478 ggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 27656541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 12268943 - 12268988
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgaggg 62  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||    
T  12268943 accatttatatacacgcaccaaacccaatagtgttgggcatgaggg 12268988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 13353221 - 13353286
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||||    
T  13353221 ggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 13353286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 33796346 - 33796411
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||||    
T  33796346 ggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 33796411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 3713364 - 3713427
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||| ||| |||||| |||||| ||| |||||||||| ||||||||| ||||||||    
T  3713364 ggcaatcctcacatcaaaagccgattttgtaaggttgtgttaggcacaaccacaatttctaaga 3713427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 6400788 - 6400630
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| | ||||| ||||||| |||||||||   || || | ||||  | ||||||||    
T  6400788 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgtt-aagagtctcacatcggacatgacatggcctgacaatgtgtttat 6400690  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
      |  | |||||||||||| ||| ||| |||||||||  || |||||||| |||||||||    
T  6400689 aagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccac 6400630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 34345551 - 34345617
Alignment:
Q  19 catttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcg 86  Q
    ||||||| |||||| ||||| | |||||||||||| |||||||| ||||||| |||||||||||||||    
T  34345551 catttatgtccacgaaccaaacacaatagtgttggtcatgagggggtgtgtt-aagagtcccacatcg 34345617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 9704991 - 9705105
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||| ||||||||||  || |||| ||||  | ||||||||  |  ||||||||| |||||||| ||| |||||||||  || ||||||||||||||    
T  9704991 aagagtctcacatcggataggacatagcctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaa 9705090  T
Q  172 ccacaaattctaaga 186  Q
    |||| | ||||||||    
T  9705091 ccaccatttctaaga 9705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 13740939 - 13741001
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| ||| ||| |||||||||  || |||||||||||||||||||| ||||||||    
T  13740939 gcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13741001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 13746439 - 13746501
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||| ||| ||| |||||||||  || |||||||||||||||||||| ||||||||    
T  13746439 gcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 19712972 - 19713038
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    |||||||| ||||||||| |||||||||||||  |  |||||||||||||||||| | |||||||||    
T  19712972 ggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagaa 19713038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3680163 - 3680234
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||  |||||||||||||||||||| | |||||| | ||||| ||||||||||||||||||    
T  3680163 caccatttatgtccacaaaccaagcccaatagtgttggtcgtgaggg-gggtgtt-aagagtcccacatcggat 3680234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 5648732 - 5648671
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||| |||||||| ||||||||||||| ||| ||||||||| ||||||| || ||||||||    
T  5648732 caatcatcacctcacaagccggttttgtgaggttgtgttaggtccaaccataatttctaaga 5648671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 6542876 - 6542804
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||| ||||||  ||||| | |||||||||||||| ||||||| ||||||||||    
T  6542876 caccatttatgtccacgaaccaagtccaatatcgttggtcgtgagggtgtgtgtt-aagagtctcacatcggat 6542804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 6623474 - 6623409
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | |||||||||||||  || ||||||||| |||||||| | ||||||||    
T  6623474 ggggcaatcctcaccttacaagccggttttgtggggttgtgttaggtccaaccacgatttctaaga 6623409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 28868021 - 28867972
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggccca 170  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||    
T  28868021 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccca 28867972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 19712734 - 19712801
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttagg--ctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  ||   |||||||||||||||||| | ||||||||    
T  19712734 ggggcaatcctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaaga 19712801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 20864402 - 20864446
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgag 60  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||    
T  20864402 caccatttatattcacgcaccaagctcaatagtgttggacatgag 20864446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 30256598 - 30256662
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaag 185  Q
    ||||||||||||| |||| || ||||||||||  || |||||||||||||||||| | |||||||    
T  30256598 ggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaag 30256662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 6543056 - 6542953
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||| ||||||||||| ||| || | ||||  | ||||||||  |  ||||||||| |||||||| |||||||||||||  || |||||||| |||||    
T  6543056 aagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaa 6542957  T
Q  172 ccac 175  Q
    ||||    
T  6542956 ccac 6542953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 8567019 - 8566960
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||| || ||||||||||  || |||||||||||||||||| | ||||||    
T  8567019 caatcctcacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 8566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 9496443 - 9496494
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgt 67  Q
    ||||||||||||  |||||||||||| ||||||||||||| |||||| ||||    
T  9496443 caccatttatatatacgcaccaagcctaatagtgttgggcgtgagggggtgt 9496494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 21690742 - 21690805
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||| ||||||  || |||||||||| ||||||| | ||||||    
T  21690742 ggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaa 21690805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 27772734 - 27772797
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||   | ||||||||| |||||||| | ||||||    
T  27772734 ggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaa 27772797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 27993573 - 27993506
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacat 84  Q
    |||||||||||||| |||||| || |||||||||||||  ||| |  ||||||||||||||| |||||    
T  27993573 accatttatatccatgcaccaggcacaatagtgttgggtgtgaagaggtgtgttaaagagtctcacat 27993506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 5572448 - 5572394
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    ||||| |||||||||||| ||| |||||||||  || ||||||||||||||||||    
T  5572448 ggggccatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccac 5572394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 2753278 - 2753331
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||| ||||||||||||| ||| |||||||||  || |||||||||||||||||    
T  2753278 ggggtaatcctcacctcacaaggcggttttgtggggttgtgttaggcccaacca 2753331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 3680032 - 3680097
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||  |||| ||| || ||||||  || |||||||||||||||||||| ||||||||    
T  3680032 ggggcaatcctcctctcacaagtcgattttgtggggttgtgttaggcccaaccacaatttctaaga 3680097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 6054423 - 6054488
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| || ||| ||||||  || |||||||| ||||||||| | ||||||||    
T  6054423 ggggcaatcctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 6065995 - 6066064
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaataa 190  Q
    |||||||||||||||| | |||  ||||||||  || |||||||||||||||||||| |  |||||||||    
T  6065995 ggggcaatcctcacctgacaagttggttttgtggggttgtgttaggcccaaccacaattcttaagaataa 6066064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 19639173 - 19639112
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| || ||||||| ||  |||||||||||| |||||||| | ||||||||    
T  19639173 caatcctcacctcacaaaccggtttagtggggctgtgttaggtccaaccacgatttctaaga 19639112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 832895 - 832943
Alignment:
Q  20 atttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtg 68  Q
    ||||| ||||| | |||||||||||||||| |||||||||||| |||||    
T  832895 atttacatccatgtaccaagcccaatagtgatgggcatgagggggtgtg 832943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 30505658 - 30505725
Alignment:
Q  21 tttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    ||||| || ||| ||||||||||| |||| ||| |||||||| | ||||| ||||||||||||||||||    
T  30505658 tttatgtctacgaaccaagcccaacagtgatggtcatgagggggggtgtt-aagagtcccacatcggat 30505725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 41666925 - 41666756
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||||| |||||||||||||||   || || | ||||  | ||||||||    
T  41666925 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggacaggacatggcctgacaatgtgtttat 41666827  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  41666826 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 18333632 - 18333462
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||| ||||| ||| | |||||| ||||||||| || |||||||||||||  || || | ||||  | ||||||||    
T  18333632 caccatttatgtccacgaaccaagcccattagtgctggtcgtgaggg-gtgtgttaa-gaatcccacatcggataggagatggtctgacaatgtgtttat 18333535  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
      |  |||| ||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||||||    
T  18333534 aagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaagaat 18333462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 7369690 - 7369804
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttagg 166  Q
    |||||||||||||||||| |||| ||| || |  |||||||||||||||  |  |||||| ||||||||||| |||||||||||||  || |||||||||    
T  7369690 tgttaaagagtcccacattggataagagatggcatgaacaagtgtttataagtgggggcagtcctcacctcacaagccggttttgtggggttgtgttagg 7369789  T
Q  167 cccaaccacaaattc 181  Q
    |||||||||||||||    
T  7369790 cccaaccacaaattc 7369804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 24346669 - 24346500
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| ||||||| |||||||| ||| | |||||| ||||||||| ||||||||||||||||  || || | ||||  | ||||||||    
T  24346669 caccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggataggacatggcctgacaatgtgtttat 24346571  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||| ||||||||||||| ||||||||||| |  || |||||||||| ||||||||| ||||||||    
T  24346570 aagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaaga 24346500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 8081282 - 8081124
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| ||||||||||||||||||  || || | ||||  | ||||||||    
T  8081282 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggataggacatggcctgacaatgtgtttat 8081184  T
Q  116 gcg-caggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
      |   ||||||||||||| |||| |||||||||||||  || |||||||||||||||||    
T  8081183 aagtggggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaacca 8081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 24270038 - 24269870
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| ||||||| |||||||| ||| | |||||| ||||||||| ||||||||||||||||  || || | ||||  | ||||||||    
T  24270038 caccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaa-gagtcccacatcggataggacatggcctgacaatgtgtttat 24269940  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
      |  |||| ||||||||||||| ||||||||||| |  || |||||||||| ||||||||| ||||||||    
T  24269939 aag-tggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaaga 24269870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 95434 - 95260
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| ||||||| ||||||||||  |  ||   ||||  | ||||||||    
T  95434 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcacacatcggataggtgatgacctgacaatgtgtttat 95336  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaataat 191  Q
      |  ||| ||||||||| |||| |||||||||||||  || |||||||||||||||||  |||||||||| ||||    
T  95335 aagtggggacaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccaagaattctaagagtaat 95260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 6919363 - 6919227
Alignment:
Q  15 tcaccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgttta 114  Q
    ||||||||||| |||||| |||||||||||||||| ||| | ||| |||||||||| ||||||||||||||  || ||| ||   ||||  | |||||||    
T  6919363 tcaccatttatgtccacgaaccaagcccaatagtgctggtcgtgatggtgtgtgtt-aagagtcccacatcaaataagagatgacctgacaatgtgttta 6919265  T
Q  115 tgcgcaggggcaatcctcacctcataagccggttttgt 152  Q
    |  |  |||||||||||||||| | |||||||||||||    
T  6919264 ttagtgggggcaatcctcaccttaaaagccggttttgt 6919227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 15480583 - 15480644
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| |||||||||||||  || |||||||||||||||||||| ||||||||    
T  15480583 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaaga 15480644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 25258158 - 25258093
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  25258158 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 25258093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 25321948 - 25321883
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  25321948 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 25321883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 33337406 - 33337334
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||||||||||||| ||| |||||||| ||||||| ||||||||||||| ||||    
T  33337406 caccatttatgtccacgaaccaagcccaatagtgctggtcatgagggggtgtgtt-aagagtcccacattggat 33337334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 41667057 - 41666992
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  41667057 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 28510113 - 28510177
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
    ||||||||||| ||||||||||||||||||  || |||||||||||||||||| | |||||||||    
T  28510113 ggcaatcctcatctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagaa 28510177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 30494666 - 30494710
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagg 61  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  30494666 accatttatatccacgcaccaagtccaatagtgttgggcatgagg 30494710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 30535009 - 30535053
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagg 61  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  30535009 accatttatatccacgcaccaagtccaatagtgttgggcatgagg 30535053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 31974356 - 31974505
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||| |||||||| ||||   ||||| || ||||| || | |||   ||||||||||    
T  31974356 caccatttatatccacacaccaagcccaatagtgttgggtgtgaggg-gtgtgttacagag-gtcacattggttgagacatggcctg---aagtgtttat 31974450  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggccca 170  Q
      |  |||||| |||||||||||  |||| ||||||| ||| |||||||||||||    
T  31974451 aagtgggggcagtcctcacctcacgagccagttttgtaaggttgtgttaggccca 31974505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 8287821 - 8287884
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||| ||||||| |||||||||||||  || |||||||||||||||||||| ||||||    
T  8287821 ggggcaatccccacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 8287884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 9368746 - 9368916
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||| ||| |||||| ||||| |||||||||| ||| | |||||| |||| |||| ||||||||||||||||  || || |  |||  | ||||||||    
T  9368746 caccatgtatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtcttaa-gagtcccacatcggataggagatggcatgacaatgtgtttat 9368844  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |  |||||||| ||||| ||| |||||| || |||  || |||||||||||||||||||| |||||||||    
T  9368845 aagtgggggcaattctcacttcacaagccgattatgtggggttgtgttaggcccaaccacaatttctaagaa 9368916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 9368617 - 9368679
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaag 185  Q
    |||||||||||||||| |||||||||||||  || ||||||||||||||||| || |||||||    
T  9368617 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaag 9368679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 19705874 - 19705988
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||||||||||||| |  || |||| ||||  | ||||||||  |  |||||||||||||||| |||||||||||||||   | ||||||||||||||    
T  19705874 aagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttaggcccaa 19705973  T
Q  172 ccacaaattctaaga 186  Q
    |||| | ||||||||    
T  19705974 ccacgatttctaaga 19705988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 27133056 - 27132994
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  27133056 gggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 17016043 - 17015972
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||| ||||||||||||| | ||||||| |||||| ||||||||||||||||||    
T  17016043 caccatttatgtccacgaaccaagtccaatagtgttggtcgtgagggt-tgtgtt-aagagtcccacatcggat 17015972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 18333763 - 18333698
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| |||| |||||||| |||||||||||||  || |||||||||||||||||| ||||||||||    
T  18333763 ggggtaatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaaga 18333698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 24528560 - 24528613
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||    
T  24528560 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 24528613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 30770217 - 30770065
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||| | |||   |||||| ||||||| ||||||||||||||||||  || ||   ||||  | || ||||     
T  30770217 caccatttatgtccacgaaccaagcccaatagcgctggttgtgagggggtgtgtt-aagagtcccacatcggataggacatgacctgacaatgtttttaa 30770119  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
      |  ||||||||||||||||||||| |||||||||| ||| || |||||||||    
T  30770118 aagtgggggcaatcctcacctcataaaccggttttgtaaggatgagttaggccc 30770065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 170615 - 170563
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacc 173  Q
    |||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  170615 ggggcagtcctcacctcacaagccggttttgtgaggttgtgttaggcccaacc 170563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 30588903 - 30588855
Alignment:
Q  138 ataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||||    
T  30588903 ataagccggttttgttgggttgtgtaaggcccaaccacaaattctaaga 30588855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 30758363 - 30758315
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||    
T  30758363 ggggcaatcctcacctcataagccggttttgtaaggatgagttaggccc 30758315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 8098337 - 8098400
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || ||||||| |||||||||| | ||||||    
T  8098337 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 8098400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 24487709 - 24487646
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||| ||||||||||||| ||||||||||||| ||| ||||||| |||||||||| | ||||||    
T  24487709 ggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaa 24487646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 37405060 - 37405175
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||||||||||| | ||||| || | ||||| |||||||| |  |  |||||||||| ||||||| |||||||||||||  || ||| |||| |||||    
T  37405060 aagagtcccacatcagttgagagatggtctgaaaaagtgtttgtaagtgggggcaatccccacctcaaaagccggttttgtggggttgtattagacccaa 37405159  T
Q  172 ccacaaattctaagaa 187  Q
    ||| ||||| ||||||    
T  37405160 ccataaattttaagaa 37405175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 60086 - 60172
Alignment:
Q  100 ctgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||| ||||||||  |  |||||||||||||||||| |||||||||||||  || | |||||| ||||| ||||| ||||||||    
T  60086 ctgaacatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaaga 60172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 9682361 - 9682315
Alignment:
Q  140 aagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  9682361 aagccggttttgtgaggttgtgttaggtccaaccacaaattctaaga 9682315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 12151967 - 12151910
Alignment:
Q  129 cctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||| ||||||||||||| ||| |||||||||| | |||||| |||||||||    
T  12151967 cctcacctcacaagccggttttgtgaggttgtgttaggcgctaccacatattctaaga 12151910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 13296693 - 13296757
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||| |||||| | || |||||||||||||||||| | ||||||||    
T  13296693 ggggcaatcctcacctcacaagccagttttg-tgggttgtgttaggcccaaccacgatttctaaga 13296757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 15480342 - 15480407
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||| ||||||||  || | |||||||||||||||| | ||||||||    
T  15480342 ggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaaga 15480407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 17352499 - 17352434
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||| ||||||||||||| ||| || ||||||| ||||||| | ||||||||    
T  17352499 ggggcaatcatcacctcacaagccggttttgtgaggttgcgttaggctcaaccaccacttctaaga 17352434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 24531619 - 24531684
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||| ||||||  || ||||||| |||||||||| | ||||||||    
T  24531619 ggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaaga 24531684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 29909783 - 29909722
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||| |||||||||||||   | |||||||||||||||||| | ||||||    
T  29909783 ggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaa 29909722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 7092169 - 7092221
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacc 173  Q
    |||||||||||||||||| ||||| |||||||  || ||||||||||||||||    
T  7092169 ggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaacc 7092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 20510808 - 20510641
Alignment:
Q  18 ccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgc 117  Q
    |||||||| |||||| |||||||||||||||| ||  | |||||| ||||||| ||||| ||||||||||||  |  || | ||||  |  |||||||      
T  20510808 ccatttatgtccacgaaccaagcccaatagtgatgatcgtgagggggtgtgtt-aagagccccacatcggataggtgatggcctgacaatatgtttataa 20510710  T
Q  118 gcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |  |||||||||||||||||| || || |||||||   | |||||||||||||| ||| | ||||||||    
T  20510709 gtgggggcaatcctcacctcaaaaaccagttttgtggagttgtgttaggcccaaacacgatttctaaga 20510641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 42295602 - 42295662
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||||||||||| |||||||||||||   | ||||||||||||||| |||| ||||||    
T  42295602 gcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaacgacaatttctaa 42295662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 6415823 - 6415882
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaaga 75  Q
    |||| ||||| |||||| ||||||||||||||||||||   ||||| |||||||||||||    
T  6415823 caccgtttatgtccacgaaccaagcccaatagtgttggttgtgaggttgtgtgttaaaga 6415882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 12034710 - 12034777
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
    |||| ||||||||||||| ||||| |||||||  |  |||||||||||||||||| | ||||||||||    
T  12034710 ggggaaatcctcacctcacaagccagttttgtaggattgtgttaggcccaaccacgatttctaagaat 12034777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 15590088 - 15590158
Alignment:
Q  15 tcaccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcg 86  Q
    ||||||||||| |||||| ||||| |||||||||| ||| | |||||| ||||||| ||||||| |||||||    
T  15590088 tcaccatttatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtgtt-aagagtctcacatcg 15590158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 17899545 - 17899474
Alignment:
Q  100 ctgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    ||||||| ||||||||  |  ||||||||||||||||||| ||||| |||||| ||| || |||||||||||    
T  17899545 ctgaacatgtgtttataagtgggggcaatcctcacctcatgagccgattttgtgaggatgagttaggcccaa 17899474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 7051969 - 7052011
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatga 59  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||    
T  7051969 accatttatatacacgcagcaaacccaatagtgttgggcatga 7052011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 2063797 - 2063733
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| ||| ||| |||||||||  || |||||||||||||||||| | ||||||||    
T  2063797 ggggcaatcctcac-tcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaaga 2063733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 6413490 - 6413441
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggccca 170  Q
    ||||||||||||||||||||||||| ||||||  || |||||||| ||||    
T  6413490 ggggcaatcctcacctcataagccgattttgtggggttgtgttagaccca 6413441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 21306907 - 21306972
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||| ||||  |  |||||||| ||||||||| | ||||||||    
T  21306907 ggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaaga 21306972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 21314745 - 21314810
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||| ||||  |  |||||||| ||||||||| | ||||||||    
T  21314745 ggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaaga 21314810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 24531753 - 24531806
Alignment:
Q  19 catttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaa 72  Q
    ||||||| |||||| |||||||||||||||| ||| | |||||| |||||||||    
T  24531753 catttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 24531806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 38731898 - 38731837
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| ||| || |||||| ||| |||||||||| ||||||| | ||||||||    
T  38731898 caatcctcacctcacaagtcgattttgtgaggttgtgttaggcacaaccaccatttctaaga 38731837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 14314637 - 14314698
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||  || |||||||||||  || |||||||||||||| |||||||| |||||    
T  14314637 ggcaatcctcacct--tacgccggttttgtggggttgtgttaggcccaatcacaaattttaaga 14314698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 17015942 - 17015890
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    ||||||| ||||||||| |||||| ||||||  || |||||||||||||||||    
T  17015942 gggcaattctcacctcacaagccgattttgtggggttgtgttaggcccaacca 17015890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 24647718 - 24647770
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||| |||||||||||||   | ||||||||| ||||||||    
T  24647718 ggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccac 24647770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 30770329 - 30770281
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    ||||||||||||||||||||||| |||||||| ||| || || ||||||    
T  30770329 ggggcaatcctcacctcataagctggttttgtaaggatgagtcaggccc 30770281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 2067 - 2237
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| |||||||||||||||||   || || | ||||  | ||||||||    
T  2067 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggacaggacatggcctgacaatgtgtttat 2165  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |  |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | |||||||||    
T  2166 aagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagaa 2237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 1936 - 2001
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | |||||||||||||  || |||||||||||||||||| | ||||||||    
T  1936 ggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 2001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 35038362 - 35038191
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||  ||| | |||||| ||||||||| ||||||||||||||||  |  || | ||||  | ||||||||    
T  35038362 caccatttatgtccacgaaccaagcccaatagtactggtcgtgagggggtgtgttaa-gagtcccacatcggataggtgatggcctgacaatgtgtttat 35038264  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaat 188  Q
      |  |||| ||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||||    
T  35038263 aagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagaat 35038191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20327782 - 20327624
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||| | |||||||||||||||||||| | |||| | ||||||||| || |||||||||||||  || || | ||||  | || |||||    
T  20327782 caccatttatgtccaggaaccaagcccaatagtgttggtcgtgagcgggtgtgttaa-gaatcccacatcggataggacatggcctgacaatgtatttat 20327684  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
      |  |||||||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  20327683 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 20327624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 13574853 - 13574694
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||| |||||| |||||||||||||||| | | | |||||| |||||||||||||||||||||||||  | | || |  ||| || | ||||||    
T  13574853 caccatttatgtccacgaaccaagcccaatagtgctagtcgtgagggagtgtgttaaagagtcccacatcggacaaaatatggcttgagcatgcgtttat 13574754  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
      |   |||| ||| |||||||| |||||||||||||  || ||||||||||||||||||    
T  13574753 aagtgcgggcgatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccac 13574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 22775567 - 22775409
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||| | ||||||||||| |||| | | || |  |||||| |||||||     
T  22775567 caccatttatatccatgcaccaatcccaatagtgttgggcatgaggtggtgtgtttaggagtcccacattggataaaagatggcttgaacatgtgtttaa 22775468  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
      |  ||||| ||||| |||| |||||||| ||||||   | |||||||| ||||||||    
T  22775467 aggtgggggctatccttaccttataagccgattttgtggtgttgtgttagacccaacca 22775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 22729120 - 22729185
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  22729120 ggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaaga 22729185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 45828039 - 45828104
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  45828039 ggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaaga 45828104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 8018991 - 8019053
Alignment:
Q  124 gcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||||| |||||||||||||  || |||||||||||||||||||| ||||||||    
T  8018991 gcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaaga 8019053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 1723140 - 1723075
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  1723140 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 1723075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 4155344 - 4155409
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  4155344 ggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4155409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 34992757 - 34992829
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| ||||||| ||||||||||||||||||    
T  34992757 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatcggat 34992829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 45828202 - 45828319
Alignment:
Q  57 tgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttagg 156  Q
    |||||| |||||||||||||||||||||||||  | | || | ||||||| ||||||||  |  |||||||||  ||||||| |||| ||||||||  ||    
T  45828202 tgagggggtgtgttaaagagtcccacatcggacaaaagatggcctgaacatgtgtttataagtgggggcaatctccacctcacaagcaggttttgtgggg 45828301  T
Q  157 ctgtgttaggcccaacca 174  Q
     |||||||||||||||||    
T  45828302 ttgtgttaggcccaacca 45828319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 50052704 - 50052540
Alignment:
Q  18 ccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgc 117  Q
    |||| |||||||||||||||||||||||   ||| ||| |||||| ||||||||||||||||| ||| |||  | | || | | || || ||||||||      
T  50052704 ccatctatatccacgcaccaagcccaat---gttaggcgtgagggggtgtgttaaagagtcccgcattggacaaaatatggcccgaccatgtgtttataa 50052608  T
Q  118 gcagggg-caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |  |||| |||||||||| ||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  50052607 gtggggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 50052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 4155475 - 4155645
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||| ||||| || ||| |||||||||||||||| ||| | |||| | ||||||||| ||||||||||||| ||  || |  | ||||  | ||||||||    
T  4155475 caccgtttatgtcgacgaaccaagcccaatagtgctggtcgtgagagggtgtgttaa-gagtcccacatcgcataggacaaggcctgacaatgtgtttat 4155573  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaa 187  Q
      |  ||| |||||||||||||| ||||||||||| |  || |||||||||||||||||| | |||||||||    
T  4155574 aagtggggacaatcctcacctcaaaagccggttttttagggttgtgttaggcccaaccacgatttctaagaa 4155645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 11589805 - 11589868
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  11589805 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 11589868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 21888556 - 21888719
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttat 115  Q
    |||||||||||||||| || ||| |||||||||||||| | |||  ||||||||||||||||| |||   || ||||| ||   |||||| | |||||||    
T  21888556 caccatttatatccacacatcaaccccaatagtgttggacgtgaaagtgtgtgttaaagagtctcacggtggttgagagatgacctgaacgaatgtttat 21888655  T
Q  116 gcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaat 179  Q
        | ||||||||  ||||||||||| |||||||||  ||||||||| |||| ||||| ||||    
T  21888656 aactatgggcaatctacacctcataagtcggttttgtggggctgtgttgggccgaaccaaaaat 21888719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 24866219 - 24866282
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  24866219 ggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 24866282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 13575040 - 13574922
Alignment:
Q  66 gtgttaaagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttag 165  Q
    |||||||||||||||||||||||  | | || |  || ||| ||||||||  |  |||| ||||||||||||| ||||| |||||||  || ||||||||    
T  13575040 gtgttaaagagtcccacatcggacaaaatatggcatggacatgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttag 13574941  T
Q  166 gcccaaccacaaattctaa 184  Q
    |||||||||||| ||||||    
T  13574940 gcccaaccacaatttctaa 13574922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 31150994 - 31151048
Alignment:
Q  15 tcaccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgt 69  Q
    ||||||||||||| || |||||||||||||||||||||||||||| || ||||||    
T  31150994 tcaccatttatatacatgcaccaagcccaatagtgttgggcatgaaggggtgtgt 31151048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 20327913 - 20327860
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||||| |||||||||||||  || |||||||||||||||||    
T  20327913 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 20327860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 34610581 - 34610646
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||| |||||||||  || |||||||| ||||||||||| ||||||||    
T  34610581 ggggcaatcctcacctcacaagtcggttttgtggggttgtgttagacccaaccacaatttctaaga 34610646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 54567912 - 54567977
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| ||||||||||||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  54567912 ggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 54567977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 27670456 - 27670402
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    |||||||||||||||||| | |||||||||||  || ||||||||||||||||||    
T  27670456 ggggcaatcctcacctcaaaggccggttttgtggggttgtgttaggcccaaccac 27670402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 49637338 - 49637384
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgaggg 62  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  49637338 caccacttatatacacgcaccaagcccaatagtgttgggcgtgaggg 49637384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 1800235 - 1800300
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| || ||||||||||  || ||||| || |||||||||| |||||||||    
T  1800235 ggggcaatcctcacctcacaaaccggttttgtggggttgtgtaagacccaaccacatattctaaga 1800300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 7697462 - 7697397
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||| |||||||| |||| ||||||||  || ||||||||||| |||||||| ||||||||    
T  7697462 ggggcaatcatcacctcacaagctggttttgtggggttgtgttaggcctaaccacaatttctaaga 7697397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 16239611 - 16239676
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||| |||||||||| |||||||||||||  |  |||||||||||||||||| | ||||||||    
T  16239611 ggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaaga 16239676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 17638254 - 17638319
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||| |||||||   || |||||||||||||||||| | ||||||||    
T  17638254 ggggcaatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaaga 17638319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23708288 - 23708223
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||| |||| ||||| || |||||    
T  23708288 ggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaaga 23708223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23726744 - 23726679
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||| |||| ||||| || |||||    
T  23726744 ggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaaga 23726679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23745200 - 23745135
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||| |||| ||||| || |||||    
T  23745200 ggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaaga 23745135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 24063725 - 24063660
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||| |||| ||||| || |||||    
T  24063725 ggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaaga 24063660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 31317248 - 31317313
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  |  |||||||||| ||||||| | ||||||||    
T  31317248 ggggcaatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaaga 31317313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 33205464 - 33205553
Alignment:
Q  100 ctgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaagaata 189  Q
    ||||||| ||||||||  | | ||||||||||||||||| ||||| ||||||   || |||||||||||||||||| | ||||| |||||    
T  33205464 ctgaacatgtgtttatatgtaagggcaatcctcacctcacaagccagttttgcggggttgtgttaggcccaaccacgatttctatgaata 33205553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 35038492 - 35038427
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| | |||| ||||||||  || |||||||||||||||||| | ||||||||    
T  35038492 ggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaaga 35038427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 39683436 - 39683364
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatcggat 89  Q
    |||||||||| |||||| ||||||||||||| || ||| | ||||||  |||||| ||||||||||||||||||    
T  39683436 caccatttatgtccacgaaccaagcccaataatgctggtcgtgagggactgtgtt-aagagtcccacatcggat 39683364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 45139035 - 45138970
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| |||||||||||||  || ||||| || ||||||||| | ||||||||    
T  45139035 ggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaaga 45138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 54368536 - 54368601
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||||||| |  || |||||||| ||||||||| | ||||||||    
T  54368536 ggggcaatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaaga 54368601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 41915137 - 41915255
Alignment:
Q  67 tgttaaagagtcccacatcggatgagaaatagac-tgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttag 165  Q
    |||||||||||||||||| |||  ||| || ||| |||||| ||||||||  |  |||||||||||||||||| || || ||||| |  |  ||||||||    
T  41915137 tgttaaagagtcccacattggaaaagagat-gacatgaacatgtgtttataagtgggggcaatcctcacctcacaaaccagttttatg-gtttgtgttag 41915234  T
Q  166 gcccaaccacaaattctaaga 186  Q
    |||||||||||||||||||||    
T  41915235 gcccaaccacaaattctaaga 41915255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 8142469 - 8142407
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||| ||||||||||||| ||| |||| ||||||||| ||| | ||||||||    
T  8142469 ggcaatcctcacctcacaagccggttttgtgaggttgtg-taggcccaatcacgatttctaaga 8142407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 9272981 - 9273044
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    ||||||| |||||||||| |||||||||||||  || ||||||| |||||||||| | ||||||    
T  9272981 ggggcaaccctcacctcacaagccggttttgtggggttgtgttaagcccaaccaccatttctaa 9273044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 40302178 - 40302229
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgt 67  Q
    |||||||||||||||| ||  || ||||||||||||||||||||||| ||||    
T  40302178 caccatttatatccacacattaatcccaatagtgttgggcatgagggagtgt 40302229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 43781605 - 43781668
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||| ||| ||| |||||||||   | |||||||||||||||||||| ||||||||    
T  43781605 ggcaatcctcacttcacaagtcggttttgtagagttgtgttaggcccaaccacaatttctaaga 43781668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 472124 - 472070
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    ||||||||||| |||||| |||||||||||||  || ||||||||||| ||||||    
T  472124 ggggcaatccttacctcacaagccggttttgtggggttgtgttaggccaaaccac 472070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 21832246 - 21832200
Alignment:
Q  123 ggcaatcctcacctcataagccggttttgttaggctgtgttaggccc 169  Q
    |||||||||||||||| ||||||||||||| ||| || |||||||||    
T  21832246 ggcaatcctcacctcacaagccggttttgtaaggatgagttaggccc 21832200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 12930188 - 12930127
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| ||||| ||| |||||||||||||  || |||||||||||||||||| | ||||||||    
T  12930188 caattctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 12930127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 20479028 - 20479092
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| ||||||||||||| |||||| |||||| |||  ||| ||||||||||||| ||||||||||    
T  20479028 ggggaaatcctcacctcacaagccgtttttgtgaggtggtgataggcccaaccac-aattctaaga 20479092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 21888451 - 21888512
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||| ||||||||||||||| ||||||| | | ||||||| ||||||||  |||||||||||    
T  21888451 caattctcacctcataagccagttttgtgaaggtgtgttacgcccaaccgtaaattctaaga 21888512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23691488 - 23691423
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||||||| ||||| ||  ||||||||| |||| ||||| || |||||    
T  23691488 ggggcaatcctcacctcacaagccggatttgtgagattgtgttaggtccaatcacaatttttaaga 23691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 35018495 - 35018560
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||| |||||||||| | |||| || ||||| |||  | ||||||||||||||||||||||||||    
T  35018495 ggggccatcctcaccttacaagctgggtttgtaaggtcgagttaggcccaaccacaaattctaaga 35018560  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 44146914 - 44146881
Alignment:
Q  15 tcaccatttatatccacgcaccaagcccaatagt 48  Q
    ||||||||||||||||||||| ||||||||||||    
T  44146914 tcaccatttatatccacgcacgaagcccaatagt 44146881  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 14611196 - 14611248
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacc 173  Q
    |||||||||||||||||| |||||||||| ||   | ||||||||||||||||    
T  14611196 ggggcaatcctcacctcacaagccggtttagtggagttgtgttaggcccaacc 14611248  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 23691256 - 23691216
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtg 161  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  23691256 ggggcaatcctcacctcacaagccggttttgtgaggttgtg 23691216  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 23708056 - 23708016
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtg 161  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  23708056 ggggcaatcctcacctcacaagccggttttgtgaggttgtg 23708016  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 23726512 - 23726472
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtg 161  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  23726512 ggggcaatcctcacctcacaagccggttttgtgaggttgtg 23726472  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 23744968 - 23744928
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtg 161  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  23744968 ggggcaatcctcacctcacaagccggttttgtgaggttgtg 23744928  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 23897744 - 23897700
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgag 60  Q
    ||||||||||| ||| ||| |||||||||||||||||||| ||||    
T  23897744 caccatttatacccatgcatcaagcccaatagtgttgggcgtgag 23897700  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 24063493 - 24063453
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtg 161  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  24063493 ggggcaatcctcacctcacaagccggttttgtgaggttgtg 24063453  T

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Target: scaffold0692 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 5867 - 5753
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||||||||||||||| ||| |||| ||||  | ||||||||  |  ||||||||||||| |||| ||||||||||||   || ||||||||||||||    
T  5867 aagagtcccacatcggataagacatagtctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaa 5768  T
Q  172 ccacaaattctaaga 186  Q
    |||| | ||||||||    
T  5767 ccacgatttctaaga 5753  T

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Target: scaffold0692; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 5608 - 5543
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||| ||| ||||||||||||   || ||||||||||||||||| || ||||||||    
T  5608 ggggcaatcctcacttcacaagccggttttgcggggttgtgttaggcccaaccataatttctaaga 5543  T

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Target: scaffold0692; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 5687 - 5633
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgtt 70  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||| |||||||    
T  5687 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt 5633  T

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Target: scaffold0766 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 6245 - 6348
Alignment:
Q  72 aagagtcccacatcggatgagaaatagactgaacaagtgtttatgcgcaggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaa 171  Q
    |||||||||||||| ||| ||| |||| ||||  | ||||||||  |  |||||||||||||||||| |||||| ||||||  || ||||||||||||||    
T  6245 aagagtcccacatcagataagagatagtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaa 6344  T
Q  172 ccac 175  Q
    ||||    
T  6345 ccac 6348  T

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Target: scaffold0400 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 3865 - 3928
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| ||||| |||||||  || |||||||||| ||||||||| ||||||    
T  3865 ggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaa 3928  T

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Target: scaffold0365 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 4509 - 4572
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||||||||||||| ||||| |||||||  || |||||||||| ||||||||| ||||||    
T  4509 ggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaa 4572  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 56480 - 56542
Alignment:
Q  122 gggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaa 184  Q
    |||||||| |||||||| |||||||||||||  || |||||||||||||||||| | ||||||    
T  56480 gggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 56542  T

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Target: scaffold0334 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 4493 - 4440
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaacca 174  Q
    |||||||||||||||||| |||||||||||||  || |||||||||| ||||||    
T  4493 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaacca 4440  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 81992 - 82060
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaaagagtcccacatc 85  Q
    |||||||||| |||| | |||||||||||||||| ||| | |||||| ||||||| ||||||||||||||    
T  81992 caccatttatgtccatgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtcccacatc 82060  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 12667 - 12732
Alignment:
Q  121 ggggcaatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    |||||||||||||||||| ||| || ||||||  || |||||||||||||||||||| || |||||    
T  12667 ggggcaatcctcacctcacaagtcgattttgtgtggttgtgttaggcccaaccacaatttttaaga 12732  T

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Target: scaffold0181 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 20964 - 21024
Alignment:
Q  126 aatcctcacctcataagccggttttgttaggctgtgttaggcccaaccacaaattctaaga 186  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||||||| | ||||||||    
T  20964 aatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 14327 - 14377
Alignment:
Q  125 caatcctcacctcataagccggttttgttaggctgtgttaggcccaaccac 175  Q
    ||||| |||||||| |||||||||||||  || ||||||||||||||||||    
T  14327 caatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccac 14377  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 28214 - 28164
Alignment:
Q  17 accatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgt 67  Q
    |||||| |||| |||||||||| || |||||||||||||||||||| ||||    
T  28214 accattgatatacacgcaccaaaccaaatagtgttgggcatgagggggtgt 28164  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 67401 - 67457
Alignment:
Q  16 caccatttatatccacgcaccaagcccaatagtgttgggcatgagggtgtgtgttaa 72  Q
    |||||||||| |||||| ||||||| ||||||||||||   ||| ||||||||||||    
T  67401 caccatttatgtccacgaaccaagctcaatagtgttggctgtgacggtgtgtgttaa 67457  T

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