View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9983_low_2 (Length: 453)
Name: NF9983_low_2
Description: NF9983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9983_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 19 - 442
Target Start/End: Original strand, 21617887 - 21618310
Alignment:
| Q |
19 |
atttgcagtatgtgacggtttcattagaaggatcaataccaatatgttttggtgaaactgaggagccagcagcatatggtgaatttgtggctattggtat |
118 |
Q |
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| T |
21617887 |
atttgcagtatgtgacggtttcattagaaggatcaataccaatatgttttggtgaaactgaggagccagcagcatatggtgaatttgtggctattggtat |
21617986 |
T |
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| Q |
119 |
tctcaatccagatttgaacaaaaaactaagtgctgaaattgccttagttcttcacaccatgttgttggtgcctaagtcacgtttctacttaaaattctat |
218 |
Q |
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| T |
21617987 |
tctcaatccagatttgaacaagaaactaagtgctgaaattgccttagttcttcacaccatgttgttggtgcctaagtcacgtttctacttaaaattctat |
21618086 |
T |
|
| Q |
219 |
gacattgaggttcccaaatttacagtctcgaattgtttctaacttttaaacaatgcaccattctcaactttatagtataagagagcttcatttgtttgtt |
318 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
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| T |
21618087 |
gacattgaggttcccaaatttacagtcttgaattgtttctaacttttaaacaatgcaacgctctcaactttatagtataagagagcttcatttgtttgtt |
21618186 |
T |
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| Q |
319 |
aatgtgcagggctataattgtggactgaatgggggtctcatggtggttgaatccaaatgattccgacaaacttgtggacagattgactcgctaaattgag |
418 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
21618187 |
aatgtgcagggctataattgtggactgaatgggggtctcatggtggttgaaaccaaatgattcggacaaacttgtggacagattgactcgctaaattgag |
21618286 |
T |
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| Q |
419 |
tgctttactttttcatgagttcat |
442 |
Q |
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|||||||||||||||||||||||| |
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| T |
21618287 |
tgctttactttttcatgagttcat |
21618310 |
T |
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