View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9984_2 (Length: 317)

Name: NF9984_2
Description: NF9984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9984_2
NF9984_2
[»] chr7 (1 HSPs)
chr7 (1-317)||(44851483-44851789)


Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 44851483 - 44851789
Alignment:
Q  1 tagaccaagaagatcctttcaaactaaatatagaaaaaagccatattgacaaaatagatcttctcttagaggaagagccactctgctatgcacagttaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44851483 tagaccaagaagatcctttcaaactaaatatagaaaaaagccatattgacaaaatagatcttctcttagaggaagagccactctgctatgcacagttaaa 44851582  T
Q  101 gaatatgtcagcatctaaatcagaagaatttgattttttcggtgagcttgaggagttacctatgtcttcatctattttacactttacgaggagcattttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44851583 gaatatgtcagcatctaaatcagaagaatttgattttttcgatgagcttgaggagttacctatgtcttcatctattttacactttacgaggagcattttt 44851682  T
Q  201 tctgatgaaaggattcctgttgccccttcttgattgattcaagtgnnnnnnnnnnatgtgtctgttgtctagaagaatgtaacaaaatgtattgttcata 300  Q
    |||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||||||||||||    
T  44851683 tctgatgaaaggattcctgttgccccttcttgattgatt----------ttttttatgtgtctgttgtctagaagaatgtaacaaaatgtattgttcata 44851772  T
Q  301 tatcgcatgctacaaac 317  Q
    |||||||||||||||||    
T  44851773 tatcgcatgctacaaac 44851789  T

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