View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_high_9 (Length: 357)
Name: NF9985A_high_9
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 14 - 351
Target Start/End: Complemental strand, 10510905 - 10510568
Alignment:
| Q |
14 |
gaaccttacaataccatttatacctgcagatgttagagctctcatacgaggccatccatgtgacgagcaaaaacatttttggattgaattgaacttaact |
113 |
Q |
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| T |
10510905 |
gaaccttacaataccatttatacctgcagatgttagagctctcatacgaggccatccatgtgacgagcaaaaacatttttggattgaattgaacttaact |
10510806 |
T |
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| Q |
114 |
aaatctagtatgaaccaacnnnnnnngggttgcaatcgttaatgaaaaatttccatgctataaaatattttaaaataaggcggcacaaaattgtcttcaa |
213 |
Q |
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| T |
10510805 |
aaatctagtatgaaccaactttttttgggttgcaatcgttaatgacaaatttccatgctataaaatattttaaaataaggcggcacaaaattgtcttcaa |
10510706 |
T |
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| Q |
214 |
caacaacaacacatcctatcctaatacaaacagtgtacaaaattgtcctgaacaacacatcttatcttatcttataatataaacaaatgaatgcacgcat |
313 |
Q |
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| T |
10510705 |
caacaacaacgcatcctatcctaatacaaacagtgtacaaaattgtcatgaacaacacatcttatcttatcttataatataaataaatgaatgcacgcat |
10510606 |
T |
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| Q |
314 |
ggtttgtcaagaaataaaataaagatgaatgcatgcat |
351 |
Q |
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| T |
10510605 |
ggtttgtcaaaaaataaaataatgatgaatgcatgcat |
10510568 |
T |
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