View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_116 (Length: 331)
Name: NF9985A_low_116
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_116 |
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Alignment Details
Target: chr6 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 21 - 324
Target Start/End: Complemental strand, 1676552 - 1676249
Alignment:
| Q |
21 |
aaaagtaaatatgtgatgataatcacaaaaaattactatttttcaaaaacaaacaacatatttaaaagataattataaacatggcttataactgggagtt |
120 |
Q |
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| T |
1676552 |
aaaagtaaatatgtgatgatgatcacaaaaaattactatttttcaaaaacaaacaacatattttaaagataattataaacatggcttataactgggagtt |
1676453 |
T |
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| Q |
121 |
gggtcttacccatctcgaggttgttcttttcagttgtaacataatgttttcgtggtgtttttattaagttgagttcttgcttaattagttttattgttct |
220 |
Q |
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| T |
1676452 |
gggtcttacccatctcgaggttgttcttttcagttgtaatataatgttttcgtggtgtttttattaagttgagttcttgattaattagttttattgttct |
1676353 |
T |
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| Q |
221 |
ttattgttgtaacataattagtttatttagtatagctctttaaacaaaataaaaatatggggaaaaaacctttatataatcatcgcttgtttcaatattc |
320 |
Q |
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| T |
1676352 |
ttattgttgtaacataattagtttatttagtatagttctttaaacaaaataaaaatatggggaaaaaacctctatataatcatcacttgtttcaatattc |
1676253 |
T |
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| Q |
321 |
ttcg |
324 |
Q |
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|||| |
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| T |
1676252 |
ttcg |
1676249 |
T |
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