View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_185 (Length: 285)
Name: NF9985A_low_185
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_185 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 33186702 - 33186976
Alignment:
| Q |
11 |
cagagaccatgggaacaatttatagaatatagttttctccattcatatatcaattatcaaggaaggtagctagaacctacaaaaagaaaagaatggcttt |
110 |
Q |
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| T |
33186702 |
cagagaccatgggaacaatttatagaatatagttttctccattcatatatcaattatcaaggaaggtagctagaacctacaaaaagaaaagaatggcttt |
33186801 |
T |
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| Q |
111 |
attttggccttaataccatatctttgtcgggagctctatgtatttttctagcacacgaacccacaatacttttctctgccatcatttttcttatttaatt |
210 |
Q |
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| T |
33186802 |
attttggccttaataccatatctttgtcgggtgctctatgtatttttctagcacacgaacccacaatacttttctctgccatcatttttcttatttaatt |
33186901 |
T |
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| Q |
211 |
ttagttttaattgttttcttccatgtcttccacataaacaaacaacattgaacaacacttccttcttgtcctcat |
285 |
Q |
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| T |
33186902 |
ttagttttaattgttttcttccatgtcttccacataaacaaacaacattgaacaacacttccttcttgtcctcat |
33186976 |
T |
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