View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_242 (Length: 257)
Name: NF9985A_low_242
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_242 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 13 - 257
Target Start/End: Complemental strand, 15695203 - 15694959
Alignment:
| Q |
13 |
aatatcctttgacttttctaaaatatctatcaatacaaacacatgaagagtggacttggtaaacataaattcatgactcaaattttctatcattacagca |
112 |
Q |
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| T |
15695203 |
aatatcctttgacttttctaaaatatctatcaatacaaacacatgaagagtggacttggtaaacataaattcatgactcaaattttctatcattacagca |
15695104 |
T |
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| Q |
113 |
tcatttgctttggacttctaaatataatagctcaattatcattacaacatcattggcaataattggaatcatgcaataggaacatagtactccatggaag |
212 |
Q |
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| T |
15695103 |
tcatttgctttggacttctaaatataatagctcaattatcattacaacatcattggcaataattggaatcatgcaataggaacatagtactccatggaag |
15695004 |
T |
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| Q |
213 |
gaagaaaactaaacttgacatcaatattttttgctttcatactat |
257 |
Q |
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| T |
15695003 |
gaagaaaactaaacttgagatcaatattttttgctttcatactat |
15694959 |
T |
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