View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9985A_low_369 (Length: 232)
Name: NF9985A_low_369
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_369 |
 | |
|
| [»] scaffold0181 (2 HSPs) |
| | |
|
| [»] scaffold0178 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 161; Significance: 5e-86; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 225
Target Start/End: Complemental strand, 22509858 - 22509650
Alignment:
| Q |
6 |
ttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagca |
105 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
22509858 |
ttaaaatgcactaccggtatgtaactataccggatgtattataaacgttatttttgtatttttagggggtctaaagagatattggggg-cctaaaaagca |
22509760 |
T |
|
| Q |
106 |
atcttcctaccttacaagatgcatatatattaaagatccaaaatataaaacgcgatacaaccctaacgcggtgaagtgcgtgtatcgcgaccattctctc |
205 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22509759 |
atcttccta----------tgcatatatattaaagatccaaaatataaaacgcgatacaaccctaacgcggtgaagtgcgtgtatcgcggccattctctc |
22509670 |
T |
|
| Q |
206 |
tttctgaataaccatgatta |
225 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
22509669 |
tttctgaataaccatgatta |
22509650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 305604 - 305714
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
305604 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
305701 |
T |
|
| Q |
100 |
aaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
305702 |
aaagcaatcttcc |
305714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33775676 - 33775567
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33775676 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
33775579 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
33775578 |
aaagcaatcttc |
33775567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 644737 - 644846
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
644737 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggtctaa |
644834 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
644835 |
aaagcaatcttc |
644846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33776205 - 33776310
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33776205 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
33776302 |
T |
|
| Q |
100 |
aaagcaat |
107 |
Q |
| |
|
|||||||| |
|
|
| T |
33776303 |
aaagcaat |
33776310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 644208 - 644099
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
644208 |
aaaatttaaaatgcactatcggtatgtaacta--ccgaatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
644111 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
644110 |
aaagcaatcttc |
644099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26276136 - 26276227
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgggggg |
94 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26276136 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttaggggacctaaagagatattgggggg |
26276227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19803486 - 19803381
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
19803486 |
aaaatttaaaatgcactaccggtatgtaacta--cggggtgtattataaaggttatttttgtattttcagggggcctaaagagatattgagggggcctaa |
19803389 |
T |
|
| Q |
100 |
aaagcaat |
107 |
Q |
| |
|
|||||||| |
|
|
| T |
19803388 |
aaagcaat |
19803381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 305051 - 304972
Alignment:
| Q |
33 |
taccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaaaaagcaatcttc |
111 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
305051 |
taccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttc |
304972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 26275495 - 26275430
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26275495 |
ttataaaggttatttttgtatttttagagggcctaaagagatattgagggggcctaaaaagcaatc |
26275430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 23950048 - 23950114
Alignment:
| Q |
43 |
attataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
23950048 |
attataaaggttaattttgtatttttagggggcctaaagagatattggaggagcctaaaaagcaatc |
23950114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 8208164 - 8208110
Alignment:
| Q |
57 |
ttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttc |
111 |
Q |
| |
|
||||| |||||||||| ||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
8208164 |
ttttggatttttagggagcctaaagagaaactggggggcctaaaaagcaatcttc |
8208110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 23949195 - 23949145
Alignment:
| Q |
43 |
attataaaggttatttttgtatttttagggggcctaaagagatattgggggg |
94 |
Q |
| |
|
||||||||||||| ||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
23949195 |
attataaaggttaattttgtatttttaagggg-ctaaagagatattgggggg |
23949145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 19693879 - 19693815
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||| || |||| |||||||| || |||||||||||||||| |||| ||||||||||||| |
|
|
| T |
19693879 |
ttataaagattgttttcgtattttttggtggcctaaagagatatttggggaactaaaaagcaatc |
19693815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 18616326 - 18616290
Alignment:
| Q |
66 |
tttagggggcctaaagagatattggggggcctaaaaag |
103 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
18616326 |
tttagggggcctaaagagata-tggggggcctaaaaag |
18616290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28824761 - 28824869
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28824761 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
28824858 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
28824859 |
aagcaatcttc |
28824869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29556151 - 29556262
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgggggg-cctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
29556151 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggggggacctaa |
29556248 |
T |
|
| Q |
100 |
aaagcaatcttcct |
113 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
29556249 |
aaagcaatcttcct |
29556262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 44446075 - 44445965
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
44446075 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
44445978 |
T |
|
| Q |
100 |
aaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
44445977 |
aaagcaatcttcc |
44445965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28824232 - 28824123
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28824232 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
28824135 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
28824134 |
aaagcaatcttc |
28824123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 38376314 - 38376205
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
38376314 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
38376217 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
38376216 |
aaagcaatcttc |
38376205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5157188 - 5157294
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5157188 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
5157285 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
5157286 |
aaagcaatc |
5157294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 5156659 - 5156550
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5156659 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
5156562 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
5156561 |
aaagaaatcttc |
5156550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29555615 - 29555506
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29555615 |
aaaatttaaaatgcacatccgggatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
29555518 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
29555517 |
aaagcaatcttc |
29555506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44446604 - 44446712
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
44446604 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgt-ttataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctga |
44446700 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
44446701 |
aaagcaatcttc |
44446712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38376851 - 38376958
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38376851 |
aaaatttaaaatgcacatccggtatgtaacta--ccggatgtattataaagattatttttgtatttt-agggggcctaaagagatattggggggcctaaa |
38376947 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
38376948 |
aagcaatcttc |
38376958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5157932 - 5158038
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| |||||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
5157932 |
aaaagttaaaatgaactaccggtatttatcta--ccggatgtcttataaaggttatttttgtatttttaggaggcctaaagagatattgagggggcctaa |
5158029 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
5158030 |
aaagcaatc |
5158038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39773673 - 39773567
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
39773673 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgaatttttagggggcctaaagagatattgagggggcctaa |
39773576 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
39773575 |
aaagcaatc |
39773567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 39774316 - 39774380
Alignment:
| Q |
45 |
tataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
39774316 |
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaatc |
39774380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 14857925 - 14858001
Alignment:
| Q |
33 |
taccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||| |||||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14857925 |
taccggatgtattattaagggcatttttgtatctttagggggcctaaagagatattgagggggcctaaaaagcaatc |
14858001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5157342 - 5157311
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaacta |
32 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
5157342 |
aaaatttaaaatgcactaccggtatgtaacta |
5157311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2600939 - 2600831
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2600939 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
2600842 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
2600841 |
aagcaatcttc |
2600831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 4275672 - 4275563
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4275672 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattaggggggcctaa |
4275575 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4275574 |
aaagcaatcttc |
4275563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4276208 - 4276317
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4276208 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
4276305 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4276306 |
aaagcaatcttc |
4276317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 31230074 - 31230183
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31230074 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
31230171 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
31230172 |
aaagcaatcttc |
31230183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 2601476 - 2601584
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2601476 |
aaaatttaaaatgcactaccggtatgtaacta--ccagatgtattataaaggttatttttgtatttttaggaggcctaaagagatattggggggcctaaa |
2601573 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
2601574 |
aagcaatcttc |
2601584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 31229537 - 31229428
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
31229537 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtacttttagggggcctaaagagatattgggggggcctaa |
31229440 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
31229439 |
aaagcaatcttc |
31229428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3341693 - 3341587
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3341693 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
3341596 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
3341595 |
aaagcaatc |
3341587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3358602 - 3358496
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3358602 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
3358505 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
3358504 |
aaagcaatc |
3358496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3342294 - 3342400
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
3342294 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggtctaaagagatattgagggggcctaa |
3342391 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
3342392 |
aaagcaatc |
3342400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3359203 - 3359309
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
3359203 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggtctaaagagatattgagggggcctaa |
3359300 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
3359301 |
aaagcaatc |
3359309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 11377009 - 11376943
Alignment:
| Q |
44 |
ttataaaggttattttt-gtatttttagggggc-ctaaagagatattggggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
11377009 |
ttataaaggttattttttgtatttttaggggggaccaaagagatattggggggcctaaaaagcaatc |
11376943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 11377361 - 11377286
Alignment:
| Q |
33 |
taccggatatattataaaggttattttt-gtatttttagggggcctaaagagatattggggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||| | ||||||| ||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||| |
|
|
| T |
11377361 |
taccggatgtcttataaaagttattttttgtatttttagggggaccaaagagatattg-ggggcctaaaaagcaatc |
11377286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 5233825 - 5233770
Alignment:
| Q |
49 |
aaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaaaaag |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |
|
|
| T |
5233825 |
aaggttatttttgtatttttagagggcctaaaaagatattggaggggcctaaaaag |
5233770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 11378175 - 11378109
Alignment:
| Q |
44 |
ttataaaggttattttt-gtattttta-gggggcctaaagagatattggggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| | |||||||||||||||||| ||||| |||||| |
|
|
| T |
11378175 |
ttataaaggttatttttcgtatttttaagggggaccaaagagatattggggggcttaaaatgcaatc |
11378109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 11378998 - 11378932
Alignment:
| Q |
44 |
ttataaaggttattttt-gtatttttagggggc-ctaaagagatattggggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||||||||||||||| ||||| |||||| |
|
|
| T |
11378998 |
ttataaaggttatttttcgtatttttagggggggccaaagagatattggggggcttaaaatgcaatc |
11378932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47942647 - 47942756
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47942647 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
47942744 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
47942745 |
aaagcaatcttc |
47942756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47948077 - 47948186
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47948077 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
47948174 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
47948175 |
aaagcaatcttc |
47948186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33256365 - 33256473
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
33256365 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtacttttagggggcctaaagagatattggggggcctaaa |
33256462 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
33256463 |
aagcaatcttc |
33256473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33255828 - 33255718
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33255828 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
33255731 |
T |
|
| Q |
100 |
aaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
33255730 |
aaagcaatcttcc |
33255718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 47942118 - 47942010
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47942118 |
aaaatttaaaatgcacatccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
47942021 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
47942020 |
aagcaatcttc |
47942010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7331219 - 7331113
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7331219 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
7331122 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
7331121 |
aaagcaatc |
7331113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 7331862 - 7331926
Alignment:
| Q |
45 |
tataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7331862 |
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaatc |
7331926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31724132 - 31724238
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||| ||||||||||||||||| |||||||||| |||||||| |||||||||| |
|
|
| T |
31724132 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaagattatttttgtatttttaaggggcctaaatagatattgagggggcctaa |
31724229 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
31724230 |
aaagcaatc |
31724238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 34151675 - 34151599
Alignment:
| Q |
33 |
taccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||| |||||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
34151675 |
taccggatgtattattaagggcatttttgtatctttagggggcctaaagagatattgagggggcctaaaaagcaatc |
34151599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 34175449 - 34175525
Alignment:
| Q |
33 |
taccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||| |||||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
34175449 |
taccggatgtattattaagggcatttttgtatctttagggggcctaaagagatattgagggggcctaaaaagcaatc |
34175525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 22377356 - 22377416
Alignment:
| Q |
52 |
gttatttttgtatttttagggggcctaaagagatattgg-ggggcctaaaaagcaatcttc |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
22377356 |
gttaattttgtatttttagggggcctaaagagatactggaggggcctaaaaagcaatcttc |
22377416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 48843245 - 48843199
Alignment:
| Q |
44 |
ttataaaggttattttt-gtatttttagggggcctaaagagatattg |
89 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
48843245 |
ttataaaggttatttttcgtatttttagggggcctaaagagatattg |
48843199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 16959595 - 16959663
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttcct |
113 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||| |||| |
|
|
| T |
16959595 |
ttataaaagttattttcatatttttagggagcctaaagagatatt-gggggcgtaaaaagcaatcctcct |
16959663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 16941088 - 16941156
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttcct |
113 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||||||||||||| | |||||| |||||||||||| |||| |
|
|
| T |
16941088 |
ttataaaagttattttcatatttttagggagcctaaagagatact-gggggcgtaaaaagcaatcctcct |
16941156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 92; Significance: 8e-45; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 39232747 - 39232855
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39232747 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaagattatttttgtatttttagggggcctaaagagatattggggggcctaaa |
39232844 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
39232845 |
aagcaatcttc |
39232855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 4206314 - 4206205
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4206314 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
4206217 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4206216 |
aaagcaatcttc |
4206205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 39232211 - 39232102
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39232211 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggaggggcctaa |
39232114 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
39232113 |
aaagcaatcttc |
39232102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 51539929 - 51539820
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
51539929 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
51539832 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
51539831 |
aaagcaatcttc |
51539820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 51540466 - 51540575
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
51540466 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
51540563 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
51540564 |
aaagcaatcttc |
51540575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 49603525 - 49603415
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
49603525 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcttaaagagatattgggggggcctaa |
49603428 |
T |
|
| Q |
100 |
aaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
49603427 |
aaagcaatcttcc |
49603415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2519664 - 2519559
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
2519664 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttaaggggcctaaagagatattggagggcctaaa |
2519567 |
T |
|
| Q |
101 |
aagcaatc |
108 |
Q |
| |
|
|||||||| |
|
|
| T |
2519566 |
aagcaatc |
2519559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4206844 - 4206953
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4206844 |
aaaatttaaaatgcactacctgtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
4206941 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4206942 |
aaagcaatcttc |
4206953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 46513632 - 46513741
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagata-ttggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
46513632 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaagattatttttgtatttttagggggcctaaagagatatttggggggcctaa |
46513729 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
||||||| |||| |
|
|
| T |
46513730 |
aaagcaaacttc |
46513741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 49604054 - 49604162
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
49604054 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgt-ttataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctga |
49604150 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
49604151 |
aaagcaatcttc |
49604162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2520264 - 2520375
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
2520264 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
2520361 |
T |
|
| Q |
100 |
aaagcaatcttcct |
113 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
2520362 |
aaagcaatcctcct |
2520375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2528629 - 2528733
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||| |||||||| || ||||||||| |||||| ||||| |||||| | ||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
2528629 |
aaaatttaaaatgcaccaccggtattta--tataccggacatattagaaaggctattttcgaatttttaggggacctaaagagatattagggggcctaaa |
2528726 |
T |
|
| Q |
101 |
aagcaat |
107 |
Q |
| |
|
||||||| |
|
|
| T |
2528727 |
aagcaat |
2528733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29380431 - 29380537
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
29380431 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgtatttttaggggacctaaagagatattgagggggcctaa |
29380528 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
29380529 |
aaagcaatc |
29380537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 29379788 - 29379724
Alignment:
| Q |
45 |
tataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29379788 |
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaatc |
29379724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 26355290 - 26355225
Alignment:
| Q |
45 |
tataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatctt |
110 |
Q |
| |
|
|||||| |||| ||||||||| |||||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
26355290 |
tataaaagttaattttgtattattagggggcctaaacagatattgggaggcctaaaaagcaatctt |
26355225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 25699353 - 25699311
Alignment:
| Q |
47 |
taaaggttatttttgtatttttagggggcctaaagagatattg |
89 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25699353 |
taaaggttattttcgtatttttagggggcctaaagagatattg |
25699311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 14090778 - 14090722
Alignment:
| Q |
52 |
gttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||| |||||||| ||||||||||| |||||||||| | |||||||||||||| |
|
|
| T |
14090778 |
gttattttcgtattttttgggggcctaaatagatattgggagacctaaaaagcaatc |
14090722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 42020457 - 42020403
Alignment:
| Q |
33 |
taccggatatattataaaggttatttttgtatttttagggggcctaaagagatat |
87 |
Q |
| |
|
||||||| || |||||||| ||||||| |||||||||||||||||||| |||||| |
|
|
| T |
42020457 |
taccggacattttataaagattattttcgtatttttagggggcctaaatagatat |
42020403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 441358 - 441304
Alignment:
| Q |
57 |
ttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttc |
111 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||| |||||||| ||||||| |
|
|
| T |
441358 |
ttttgtaattttagggggcctaaagagatatgaggggctctaaaaagaaatcttc |
441304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 250320 - 250428
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
250320 |
aaaatttaaaatgcactacctgtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
250417 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
250418 |
aagcaatcttc |
250428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11625393 - 11625285
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11625393 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaatgttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
11625296 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
11625295 |
aagcaatcttc |
11625285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36180367 - 36180476
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36180367 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
36180464 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
36180465 |
aaagcaatcttc |
36180476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 36179823 - 36179715
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
36179823 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttaggaggcctaaagagatattgggggacctaaa |
36179726 |
T |
|
| Q |
101 |
aagcaatcttc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
36179725 |
aagcaatcttc |
36179715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11625930 - 11626040
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11625930 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaagattatttttgtatttttagggggcctaaagagatattgggggggcctaa |
11626027 |
T |
|
| Q |
100 |
aaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11626028 |
aaagcaatcttcc |
11626040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47708466 - 47708575
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47708466 |
aaaatttaaaatgcactaccagtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
47708563 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
47708564 |
aaagcaatcttc |
47708575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 249790 - 249681
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
249790 |
aaaatttaaaatgcactaccgatatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggtctaaagagatattgggggggcctaa |
249693 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
249692 |
aaagcaatcttc |
249681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 45880863 - 45880757
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
45880863 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
45880766 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
45880765 |
aaagcaatc |
45880757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35813400 - 35813295
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
35813400 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggcctaaagagatattgaggggcctaaa |
35813303 |
T |
|
| Q |
101 |
aagcaatc |
108 |
Q |
| |
|
|||||||| |
|
|
| T |
35813302 |
aagcaatc |
35813295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9088398 - 9088504
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9088398 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
9088495 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
9088496 |
aaagcaatc |
9088504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 35814028 - 35814093
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35814028 |
ttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaatc |
35814093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 45881506 - 45881570
Alignment:
| Q |
45 |
tataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
45881506 |
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaatc |
45881570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 9087752 - 9087691
Alignment:
| Q |
48 |
aaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9087752 |
aaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaatc |
9087691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32517519 - 32517625
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
32517519 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgtatttttagggggcctaaagagatattgaggggttctaa |
32517616 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
32517617 |
aaagcaatc |
32517625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 32516876 - 32516812
Alignment:
| Q |
45 |
tataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| |
|
|
| T |
32516876 |
tataaaggttatttttgtatttttaggggacttaaagagatattgagggggcctaaaaagcaatc |
32516812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 51590750 - 51590826
Alignment:
| Q |
33 |
taccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||| |||||| |||| |||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
51590750 |
taccggatgtattattaagggtatttttgtagttttagggtgcctaaagagatattgtgggggtctaaaaagcaatc |
51590826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 42308899 - 42308963
Alignment:
| Q |
49 |
aaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaaaaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| || ||||| |
|
|
| T |
42308899 |
aaggttatttttgtatttttaggaggcctaaaaagatattggaggggcctaaaaagtaaccttcc |
42308963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 27039099 - 27039160
Alignment:
| Q |
50 |
aggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttc |
111 |
Q |
| |
|
|||||| ||| ||||||||||||||| |||| ||||||||||||||||||| ||||| |||| |
|
|
| T |
27039099 |
aggttaatttcgtatttttagggggcttaaaaagatattggggggcctaaagagcaaccttc |
27039160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 29113046 - 29113110
Alignment:
| Q |
2 |
aaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtattttt |
68 |
Q |
| |
|
|||||||||||||||||| ||||| || |||| ||||| |||||||||||||||||||||| |||| |
|
|
| T |
29113046 |
aaatttaaaatgcactacgggtattta--tatatcggatgtattataaaggttatttttgtaatttt |
29113110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 51588686 - 51588630
Alignment:
| Q |
55 |
atttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttcc |
112 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| | | ||||||||||||||||||| |
|
|
| T |
51588686 |
atttttgtaactttagggggcctgaagagatatt-gagagcctaaaaagcaatcttcc |
51588630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22424678 - 22424788
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22424678 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
22424775 |
T |
|
| Q |
100 |
aaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22424776 |
aaagcaatcttcc |
22424788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29982860 - 29982966
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
29982860 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
29982957 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
29982958 |
aaagcaatc |
29982966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 1389043 - 1389152
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1389043 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
1389140 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
1389141 |
aaagcaatcttc |
1389152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37645114 - 37645220
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37645114 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatatattctaaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
37645211 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
37645212 |
aaagcaatc |
37645220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22424141 - 22424032
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggg-gcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
22424141 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttaaggggcctaaagagatattgggggagcctaa |
22424044 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22424043 |
aaagcaatcttc |
22424032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37644513 - 37644407
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37644513 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
37644416 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
37644415 |
aaagcaatc |
37644407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21647708 - 21647602
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21647708 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaa |
21647611 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
21647610 |
aaagcaatc |
21647602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29982259 - 29982153
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
29982259 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttgtatttttagggggcctaaagagatattgagagggcctaa |
29982162 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
29982161 |
aaagcaatc |
29982153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21648309 - 21648415
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
21648309 |
aaaaattaaaatgaactaccggtatttatcta--ccggaagtcgtataaaggttatttttgtatttttagggggtctaaagagatattgagggggcctaa |
21648406 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
21648407 |
aaagcaatc |
21648415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 15321879 - 15321814
Alignment:
| Q |
45 |
tataaaggttatttttgt-atttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
15321879 |
tataaaggttatttttgttatttttagggggcctaaagagatattgagggggcttaaaaagcaatc |
15321814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 15167800 - 15167876
Alignment:
| Q |
33 |
taccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||| ||| |||||| |||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
15167800 |
taccagatgtattattaagggcatttttgtatctttagggggcctaaagagatattgagggggtctaaaaagcaatc |
15167876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 25217052 - 25217147
Alignment:
| Q |
5 |
tttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagata-ttggggggcctaaaa |
101 |
Q |
| |
|
|||||||||||| |||||||| |||||| || || ||||||||||| |||||| |||||||| |||| ||||||||||| ||||||||||||||| |
|
|
| T |
25217052 |
tttaaaatgcaccaccggtatttaacta--cctgacgtattataaaggatattttcatatttttaaggggtctaaagagatatttggggggcctaaaa |
25217147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15322600 - 15322677
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaa |
80 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15322600 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggtcatttttgtatttttagggggcctaaa |
15322677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11503785 - 11503676
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11503785 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
11503688 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11503687 |
aaagcaatcttc |
11503676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 47861883 - 47861774
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47861883 |
aaaatttaaaatgcacatccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaa |
47861786 |
T |
|
| Q |
101 |
aagcaatcttcc |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
47861785 |
aagcaatcttcc |
47861774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47862420 - 47862529
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
47862420 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattggaggggcctaa |
47862517 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
47862518 |
aaagcaatcttc |
47862529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 48222962 - 48223071
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatatt-ggggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
48222962 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
48223059 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
48223060 |
aaagcaatcttc |
48223071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 53303056 - 53302945
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
53303056 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
53302959 |
T |
|
| Q |
100 |
aaagcaatcttcct |
113 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
53302958 |
aaagcaatattcct |
53302945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 48222432 - 48222323
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
48222432 |
aaaatttaaaatgcactacctgtatgtaacta--ccggatgtattataaaggttatttttgtatttttagggggcctaaagagatattgggggggcctaa |
48222335 |
T |
|
| Q |
100 |
aaagcaatcttc |
111 |
Q |
| |
|
|||||||||||| |
|
|
| T |
48222334 |
aaagcaatcttc |
48222323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1194204 - 1194099
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
1194204 |
aaaatttaaaatgcactaccggtatgtaacta--ccgggtgtattataaaggttatttttgtatttttggggggcctaaagagatattgagggggcctaa |
1194107 |
T |
|
| Q |
100 |
aaagcaat |
107 |
Q |
| |
|
|||||||| |
|
|
| T |
1194106 |
aaagcaat |
1194099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 53303593 - 53303681
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggg |
91 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53303593 |
aaaatttaaaatgcactaccggtatgtaacta--ccggatgtgttataaaggttatttttgtatttttagggggcctaaagagatattggg |
53303681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11504321 - 11504431
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattggggg-gcctaa |
99 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |
|
|
| T |
11504321 |
aaaatttaaaatgcacatccgggatgtaacta--ccggatgtattataaaggttatttttgtatttttaaggggcctaaaaagatattgggggagcctaa |
11504418 |
T |
|
| Q |
100 |
aaagcaatcttcc |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11504419 |
aaagcaatcttcc |
11504431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 6588611 - 6588547
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
6588611 |
ttataaaggttatttttgtatttttagggggcctaaagagatattgagggggctaaaaagcaatc |
6588547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 30733672 - 30733609
Alignment:
| Q |
49 |
aaggttatttttgtatttttagggggcctaaagagatattgg-ggggcctaaaaagcaatcttc |
111 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30733672 |
aaggttaattttgtatttttagggggcctaaagagatattggaggggcctaaaaagcaatcttc |
30733609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 16073698 - 16073635
Alignment:
| Q |
48 |
aaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttcc |
112 |
Q |
| |
|
|||||||| |||||||||||| ||||||| ||||||||||| |||||||| |||||||||||||| |
|
|
| T |
16073698 |
aaaggttaattttgtatttttggggggcccaaagagatatttgggggcct-aaaagcaatcttcc |
16073635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 11195828 - 11195861
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcct |
77 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
11195828 |
ttataaaggttatttttgtatttttagggggcct |
11195861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 25749094 - 25749130
Alignment:
| Q |
57 |
ttttgtatttttagggggcctaaagagatattggggg |
93 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25749094 |
ttttgtatttttagggggcctaaaaagatattggggg |
25749130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 6589314 - 6589374
Alignment:
| Q |
48 |
aaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
|||||||||||| ||||||| | ||||||||||||||||| | |||||||||||| |||||| |
|
|
| T |
6589314 |
aaaggttattttcgtatttt-acggggcctaaagagatatcgagggggcctaaaaggcaatc |
6589374 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0181 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0181
Description:
Target: scaffold0181; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 18060 - 18122
Alignment:
| Q |
45 |
tataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaa |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18060 |
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaa |
18122 |
T |
|
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Target: scaffold0181; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17417 - 17311
Alignment:
| Q |
1 |
aaaatttaaaatgcactaccggtatgtaactataccggatatattataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaa |
99 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||| ||||| | ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
17417 |
aaaagttaaaatgaactaccggtatttatcta--ccggaagtcttataaaggttatttttatatttttagggggcctaaagaaatattgagggggcctaa |
17320 |
T |
|
| Q |
100 |
aaagcaatc |
108 |
Q |
| |
|
||||||||| |
|
|
| T |
17319 |
aaagcaatc |
17311 |
T |
|
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Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0178
Description:
Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4816 - 4748
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattggggggcctaaaaagcaatcttcc |
112 |
Q |
| |
|
|||||||||||||||| ||||||| | | |||||||||||||||| ||||| || ||||||||| |||| |
|
|
| T |
4816 |
ttataaaggttattttcgtattttaaagaggcctaaagagatatttggggggcttaaaagcaatattcc |
4748 |
T |
|
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Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 5144 - 5209
Alignment:
| Q |
44 |
ttataaaggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatc |
108 |
Q |
| |
|
||||||||| |||||| |||||||| ||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
5144 |
ttataaaggatattttcctatttttatgggtcctaaagagatattgatggggcctaaaaagcaatc |
5209 |
T |
|
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