View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_402 (Length: 229)
Name: NF9985A_low_402
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_402 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 40225593 - 40225396
Alignment:
| Q |
12 |
atctcaaacaatatacccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccat |
111 |
Q |
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| T |
40225593 |
atctcaaacactatacccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccat |
40225494 |
T |
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| Q |
112 |
cattctctcattaaactcaaaccttacgttacgcccacgttcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctatagct |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40225493 |
cattctctcattaaactcaaaccttacgttacgcccacgttcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctatagct |
40225396 |
T |
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