View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_433 (Length: 224)
Name: NF9985A_low_433
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_433 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 6475311 - 6475515
Alignment:
| Q |
14 |
tctaattaatttttaacaaaatcaagttcaaaaacacacttcgttgaaacgttagacatcgtttctcaaatggggagggttacacataattgttgagcga |
113 |
Q |
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| T |
6475311 |
tctaattaatttttaacaaaatcaagttcaaaaacacactctgttgaaacgttagacatcatttctcaaatggagagggttacacataattgttgagcga |
6475410 |
T |
|
| Q |
114 |
aaaatttatttagtaaatgcatcacaaagagaaattatgtatttttgtgtaaagggcaaaaataagctgctgttaacaagatatgtatatgtacgtattg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
6475411 |
aaaatttatttagtaaatgcatcacaaagagaaattatgcgtttttgtgtaaagggcaaaaataagctgctgttaacaagatatgtacatgtacgtattg |
6475510 |
T |
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| Q |
214 |
aatat |
218 |
Q |
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||||| |
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| T |
6475511 |
aatat |
6475515 |
T |
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