View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_451 (Length: 218)
Name: NF9985A_low_451
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_451 |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 32706131 - 32705947
Alignment:
| Q |
21 |
actgaatttgttattctaacggtgtcccataaaattattcaaagttgagtgttttcttcatgcataattcaatttgcactcaactatgtaaaatacttca |
120 |
Q |
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| T |
32706131 |
actgaatttgttattctaacggtgtcccataaaattattcaaagttgagtgttttcttcatgcataattcaatttgcactcaactatgtaaaatacttca |
32706032 |
T |
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| Q |
121 |
atttggaactcaactatggaaagttgaaaattgagaagaatactactggacaacgtattggagagaggtcttctttttgatgtcc |
205 |
Q |
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| T |
32706031 |
atttggaactcaactatggaaagttgaaaattgagaagaatactactggacaacgtattggagagaggtcttcttttcgatgtcc |
32705947 |
T |
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