View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_454 (Length: 217)
Name: NF9985A_low_454
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_454 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 1329640 - 1329433
Alignment:
| Q |
1 |
tgacttcattcagttcctgttccggttcagggtcgggttcgggttccttggcttcttcatccgaattgttctcttcttgaacatcagctttattgctttg |
100 |
Q |
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| T |
1329640 |
tgactgcattcatatcctcttccggttcaggttcgggttcgggttccttggcttcttcatccgaattgttctcttcttgaacatcagctttattgctttg |
1329541 |
T |
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| Q |
101 |
tgctagcatgttcttatctttgataaactcttccataacctctaacttctttggtgtgaccttatctatctcagggtactcagaagagcgacaaattcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1329540 |
tgctagcatgttcttatctttgataaactcttccataacctctaacttctttggtgtgaccttatctatctcagggtactcagaagagcgacaaattcca |
1329441 |
T |
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| Q |
201 |
atattctt |
208 |
Q |
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|||||||| |
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| T |
1329440 |
atattctt |
1329433 |
T |
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