View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985A_low_458 (Length: 215)
Name: NF9985A_low_458
Description: NF9985A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985A_low_458 |
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Alignment Details
Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 45626054 - 45626198
Alignment:
| Q |
43 |
gcatcctgctctgatctcctcgacacttttaaatttgaagacactccaactccctctactgttccccttctcaagggaatttggacctgaaatcaaatca |
142 |
Q |
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| T |
45626054 |
gcatcctgctctgatctcctcgacacttttaaatttgaagacactgcaactccctctactgttccccttctcaagggaatttggacctgaaatcaaatca |
45626153 |
T |
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| Q |
143 |
atataaatatagctttcgaatagtatagtcatgtatgttaatatt |
187 |
Q |
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| T |
45626154 |
atataaatatagctttcgaatagtatagtcatgtatgttaatatt |
45626198 |
T |
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