View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9985_high_25 (Length: 237)
Name: NF9985_high_25
Description: NF9985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9985_high_25 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 10510779 - 10510568
Alignment:
| Q |
12 |
gggttgcaatcgttaatgaaaaatttccatgctataaaatattttaaaataaggcggcacaaaattgtcttcaacaacaacaacacatcctatcctaata |
111 |
Q |
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| T |
10510779 |
gggttgcaatcgttaatgacaaatttccatgctataaaatattttaaaataaggcggcacaaaattgtcttcaacaacaacaacgcatcctatcctaata |
10510680 |
T |
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| Q |
112 |
caaacagtgtacaaaattgtcctgaacaacacatcttatcttatcttataatataaacaaatgaatgcacgcatggtttgtcaagaaataaaataaagat |
211 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| |
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| T |
10510679 |
caaacagtgtacaaaattgtcatgaacaacacatcttatcttatcttataatataaataaatgaatgcacgcatggtttgtcaaaaaataaaataatgat |
10510580 |
T |
|
| Q |
212 |
gaatgcatgcat |
223 |
Q |
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|||||||||||| |
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| T |
10510579 |
gaatgcatgcat |
10510568 |
T |
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