View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9986_high_12 (Length: 240)
Name: NF9986_high_12
Description: NF9986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9986_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 26564824 - 26564605
Alignment:
| Q |
17 |
accatattttcccaattcacaagaagcattcttcgttaatccaactatagcatgctttgaagctgtataagcatgtggaccaagtcctcctaaaactcca |
116 |
Q |
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| T |
26564824 |
accatattttcccaattcacaagaagcattctttgttaatccaactatagcatgctttgaagctgtataagcatgtggaccaagtcctcctaaaactcca |
26564725 |
T |
|
| Q |
117 |
gctacactagaagtggatattatgcatccaattcctctaggtatcataacctttgcagcatgtttcatacctaaagcaactcctttaacattaacactca |
216 |
Q |
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||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
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| T |
26564724 |
gctacactagaagtggatactatgcatccatttcctctaggtatcataacctttgcagcatgtttcatacctaaagcaacacctttaacattaacattca |
26564625 |
T |
|
| Q |
217 |
tgactcggtcgaattcctcg |
236 |
Q |
| |
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|||||||||||||||||||| |
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| T |
26564624 |
tgactcggtcgaattcctcg |
26564605 |
T |
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