View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9986_low_14 (Length: 272)
Name: NF9986_low_14
Description: NF9986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9986_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 34139667 - 34139411
Alignment:
| Q |
1 |
aaaagcccaataccagcagcacaagcaagcctaacagattttggtataagcttagcaagtttacctcttaaaccaaaagcagaagctaaaagaaaagcac |
100 |
Q |
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| T |
34139667 |
aaaagcccaataccagcagcacaagcaagcctaacagattttggtataagcttagcaagtttacctcttaaaccaaaagcagaagctaaaagaaaagcac |
34139568 |
T |
|
| Q |
101 |
agccttcaacaagaacaatagccattgaagtttgatatgagattgagccactaccatgataaccaacaaggttaaaagctaaataagcattaggccccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34139567 |
agccttcaacaagaacaatagccattgaagtttgatatgagattgagccacttccatgataaccaacaaggttaaaagctaaataagcattaggccccat |
34139468 |
T |
|
| Q |
201 |
acctggagcaagacctaaaggaaggttagctaaaaatcccattgcaacagaagaaac |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34139467 |
acctggagcaagacctaaaggaaggttagctaaaaatcccattgcaacagaagaaac |
34139411 |
T |
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