View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9987_high_3 (Length: 259)
Name: NF9987_high_3
Description: NF9987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9987_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 6054259 - 6054505
Alignment:
| Q |
2 |
ttaacttatctaaagtagaagtaaaaacatattagaattttgatgaattcatggtgaaatgttggtgtgctagactgccagtagtttaatactaccagca |
101 |
Q |
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| T |
6054259 |
ttaacttatctaaagtagaagtaaaaacagattagcattttgatgaattcatggtgaaatgttggtgtgctagactgccagtagtttaatactaccagca |
6054358 |
T |
|
| Q |
102 |
aagggcaactacctcagtgtccagttatcatcgcagtataaaactttgcaagtggaaaatatttttcttataaattgtacattagattacgccatagtag |
201 |
Q |
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| T |
6054359 |
aagggcaactacctcagtgtccagttatcatcgcagtataaaactttgtaagtgaaaaatattttccttataaattgtacattagattacgccacagaaa |
6054458 |
T |
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| Q |
202 |
ttctttgattatgatttcacataccgtgtttttgtttttgtgcctat |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6054459 |
ttctttgattatgatttcacataccgtgtttttgtttttgtgcctat |
6054505 |
T |
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