View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9987_low_4 (Length: 292)

Name: NF9987_low_4
Description: NF9987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9987_low_4
NF9987_low_4
[»] chr8 (36 HSPs)
chr8 (45-209)||(24501821-24501984)
chr8 (45-209)||(26374438-26374601)
chr8 (45-209)||(42938125-42938288)
chr8 (45-209)||(2704827-2704990)
chr8 (45-209)||(7506907-7507070)
chr8 (45-209)||(42937388-42937549)
chr8 (45-209)||(42735285-42735448)
chr8 (49-208)||(10392246-10392404)
chr8 (45-209)||(5576628-5576792)
chr8 (45-207)||(23115179-23115339)
chr8 (45-209)||(41479132-41479285)
chr8 (47-208)||(39467477-39467637)
chr8 (47-209)||(10295388-10295550)
chr8 (47-209)||(14782143-14782304)
chr8 (48-209)||(43959695-43959845)
chr8 (47-209)||(44725818-44725979)
chr8 (47-208)||(18958736-18958896)
chr8 (82-209)||(9288465-9288591)
chr8 (45-209)||(43166698-43166861)
chr8 (91-209)||(4403188-4403305)
chr8 (47-190)||(26856104-26856246)
chr8 (47-209)||(19717889-19718050)
chr8 (45-139)||(32711359-32711453)
chr8 (91-209)||(4950024-4950141)
chr8 (91-198)||(13478269-13478375)
chr8 (47-209)||(18305979-18306130)
chr8 (47-131)||(31623732-31623816)
chr8 (47-209)||(32497562-32497713)
chr8 (91-209)||(39189824-39189939)
chr8 (47-150)||(16362233-16362335)
chr8 (47-209)||(7466372-7466523)
chr8 (91-190)||(8410423-8410523)
chr8 (82-131)||(4031343-4031392)
chr8 (82-150)||(37857191-37857258)
chr8 (91-127)||(42305874-42305910)
chr8 (165-200)||(32711311-32711346)
[»] chr7 (60 HSPs)
chr7 (45-209)||(47914302-47914465)
chr7 (48-209)||(43581098-43581258)
chr7 (45-209)||(7718370-7718533)
chr7 (45-209)||(7719268-7719431)
chr7 (45-209)||(18914743-18914906)
chr7 (45-209)||(30440832-30440995)
chr7 (45-209)||(34695309-34695472)
chr7 (45-209)||(40996657-40996820)
chr7 (45-209)||(47879204-47879367)
chr7 (45-209)||(973220-973383)
chr7 (45-209)||(12893444-12893607)
chr7 (49-209)||(44343404-44343563)
chr7 (46-209)||(20275271-20275433)
chr7 (49-209)||(39219385-39219543)
chr7 (45-209)||(34009048-34009212)
chr7 (91-209)||(32142925-32143042)
chr7 (86-188)||(43679491-43679592)
chr7 (47-208)||(10068498-10068658)
chr7 (47-209)||(29614772-29614933)
chr7 (86-201)||(7113529-7113643)
chr7 (47-209)||(23101329-23101490)
chr7 (82-190)||(12963767-12963874)
chr7 (82-209)||(28342413-28342539)
chr7 (47-209)||(3022957-3023118)
chr7 (47-209)||(39784130-39784291)
chr7 (45-150)||(31638911-31639015)
chr7 (47-208)||(33382668-33382828)
chr7 (91-209)||(7993217-7993334)
chr7 (47-209)||(8675364-8675525)
chr7 (47-209)||(18838420-18838581)
chr7 (49-209)||(28034813-28034972)
chr7 (47-190)||(9882263-9882405)
chr7 (91-208)||(43187366-43187482)
chr7 (91-187)||(25805767-25805862)
chr7 (91-199)||(727595-727692)
chr7 (45-174)||(10676463-10676591)
chr7 (47-201)||(3797082-3797226)
chr7 (48-209)||(9179912-9180062)
chr7 (82-209)||(12740439-12740564)
chr7 (91-209)||(19810874-19810981)
chr7 (102-198)||(37972886-37972981)
chr7 (48-183)||(32883814-32883948)
chr7 (47-150)||(44121967-44122069)
chr7 (82-150)||(19251605-19251672)
chr7 (49-150)||(40460774-40460874)
chr7 (47-208)||(44256775-44256935)
chr7 (102-209)||(41827390-41827496)
chr7 (47-150)||(509687-509789)
chr7 (47-150)||(37327958-37328060)
chr7 (47-150)||(46405498-46405600)
chr7 (82-131)||(47066770-47066819)
chr7 (91-131)||(17001108-17001148)
chr7 (47-140)||(33892326-33892419)
chr7 (45-188)||(44623315-44623447)
chr7 (91-199)||(1470252-1470358)
chr7 (49-150)||(39028130-39028230)
chr7 (91-150)||(29585589-29585647)
chr7 (122-201)||(10617024-10617102)
chr7 (154-208)||(44121919-44121973)
chr7 (91-127)||(447858-447894)
[»] chr6 (17 HSPs)
chr6 (45-209)||(6197486-6197649)
chr6 (45-207)||(1391658-1391819)
chr6 (46-201)||(28002700-28002854)
chr6 (45-209)||(2300746-2300909)
chr6 (45-208)||(29076632-29076795)
chr6 (82-208)||(29111644-29111769)
chr6 (45-209)||(7051879-7052042)
chr6 (48-209)||(31895733-31895893)
chr6 (48-209)||(34759058-34759218)
chr6 (91-209)||(34773489-34773606)
chr6 (82-198)||(14262452-14262567)
chr6 (45-209)||(7497110-7497272)
chr6 (91-209)||(31067573-31067680)
chr6 (82-131)||(30385142-30385191)
chr6 (45-111)||(656999-657065)
chr6 (102-150)||(4200494-4200541)
chr6 (91-131)||(3848290-3848330)
[»] chr5 (25 HSPs)
chr5 (45-209)||(21147102-21147265)
chr5 (48-209)||(7016747-7016907)
chr5 (45-209)||(33656049-33656212)
chr5 (46-209)||(5272927-5273089)
chr5 (45-198)||(849182-849334)
chr5 (45-209)||(139308-139471)
chr5 (48-201)||(27458966-27459117)
chr5 (48-184)||(6460830-6460965)
chr5 (45-209)||(32157902-32158069)
chr5 (47-209)||(1152111-1152272)
chr5 (82-209)||(39852417-39852543)
chr5 (47-198)||(7947592-7947742)
chr5 (47-209)||(14000113-14000274)
chr5 (47-208)||(4550266-4550426)
chr5 (82-190)||(13926003-13926110)
chr5 (45-209)||(9689693-9689855)
chr5 (46-178)||(14465266-14465397)
chr5 (47-150)||(4240519-4240621)
chr5 (47-157)||(22746334-22746443)
chr5 (47-150)||(1461205-1461307)
chr5 (91-150)||(5949189-5949247)
chr5 (49-127)||(9220796-9220874)
chr5 (91-209)||(40013720-40013827)
chr5 (47-131)||(37013951-37014035)
chr5 (45-74)||(16894044-16894073)
[»] chr4 (61 HSPs)
chr4 (45-209)||(25331165-25331328)
chr4 (45-209)||(55302877-55303040)
chr4 (45-209)||(1044841-1045004)
chr4 (45-209)||(32950845-32951008)
chr4 (45-209)||(41881091-41881255)
chr4 (45-209)||(7007408-7007571)
chr4 (45-209)||(12112979-12113142)
chr4 (45-209)||(1112927-1113090)
chr4 (45-209)||(22202049-22202212)
chr4 (45-189)||(25446084-25446227)
chr4 (45-209)||(30009686-30009849)
chr4 (45-209)||(34228592-34228755)
chr4 (45-209)||(42786718-42786881)
chr4 (45-188)||(28541732-28541874)
chr4 (45-209)||(37046459-37046624)
chr4 (54-209)||(41320853-41321007)
chr4 (82-188)||(7249795-7249900)
chr4 (45-209)||(39479364-39479529)
chr4 (49-209)||(3436631-3436790)
chr4 (45-197)||(19740929-19741080)
chr4 (45-209)||(46635657-46635814)
chr4 (48-190)||(53275876-53276017)
chr4 (56-209)||(31314751-31314893)
chr4 (49-174)||(23464993-23465117)
chr4 (49-161)||(25504696-25504807)
chr4 (47-209)||(5441440-5441601)
chr4 (47-209)||(27768092-27768253)
chr4 (47-209)||(54341180-54341341)
chr4 (85-201)||(27454095-27454210)
chr4 (82-181)||(9163147-9163245)
chr4 (102-209)||(24130990-24131097)
chr4 (47-208)||(37915863-37916023)
chr4 (82-209)||(37828411-37828537)
chr4 (47-209)||(51320957-51321118)
chr4 (91-215)||(44770856-44770979)
chr4 (48-209)||(54853477-54853637)
chr4 (82-209)||(48261198-48261324)
chr4 (47-209)||(32322127-32322288)
chr4 (45-209)||(39307262-39307425)
chr4 (91-209)||(40537169-40537276)
chr4 (47-150)||(23987250-23987352)
chr4 (82-209)||(41725196-41725319)
chr4 (137-209)||(8711991-8712063)
chr4 (91-209)||(12913304-12913411)
chr4 (91-209)||(56445364-56445471)
chr4 (91-174)||(28371004-28371086)
chr4 (47-131)||(49834899-49834983)
chr4 (143-209)||(11090435-11090501)
chr4 (47-150)||(29649735-29649837)
chr4 (137-209)||(24736460-24736532)
chr4 (47-131)||(28483935-28484019)
chr4 (47-209)||(30967318-30967469)
chr4 (102-210)||(20021424-20021532)
chr4 (82-131)||(32684074-32684123)
chr4 (82-209)||(36479251-36479366)
chr4 (82-208)||(5800049-5800164)
chr4 (47-131)||(49501597-49501681)
chr4 (47-131)||(49507662-49507746)
chr4 (100-184)||(41581824-41581905)
chr4 (82-131)||(50018322-50018371)
chr4 (45-74)||(24131115-24131144)
[»] chr3 (58 HSPs)
chr3 (45-209)||(10139155-10139318)
chr3 (45-209)||(20498243-20498406)
chr3 (45-209)||(996095-996258)
chr3 (45-209)||(3206214-3206377)
chr3 (45-209)||(19253861-19254024)
chr3 (45-209)||(33807807-33807971)
chr3 (48-209)||(54625629-54625789)
chr3 (45-209)||(3999654-3999817)
chr3 (45-209)||(6589598-6589761)
chr3 (45-209)||(37820486-37820649)
chr3 (49-209)||(29448867-29449026)
chr3 (45-209)||(33996550-33996713)
chr3 (45-208)||(35337769-35337930)
chr3 (45-207)||(40246878-40247039)
chr3 (48-209)||(44762046-44762206)
chr3 (45-208)||(53929138-53929300)
chr3 (45-207)||(25418400-25418561)
chr3 (45-201)||(51699497-51699651)
chr3 (47-209)||(6035062-6035223)
chr3 (45-164)||(1440006-1440124)
chr3 (45-209)||(52114562-52114726)
chr3 (47-209)||(17946324-17946485)
chr3 (45-183)||(22057796-22057933)
chr3 (45-181)||(29030040-29030174)
chr3 (47-209)||(40897180-40897341)
chr3 (82-209)||(18749683-18749809)
chr3 (91-209)||(5825142-5825259)
chr3 (47-209)||(36674139-36674300)
chr3 (47-209)||(44906522-44906683)
chr3 (47-209)||(48379193-48379354)
chr3 (82-209)||(32580247-32580373)
chr3 (91-209)||(34484039-34484156)
chr3 (47-190)||(51737754-51737896)
chr3 (47-209)||(11431562-11431723)
chr3 (46-201)||(27899379-27899523)
chr3 (47-174)||(52618009-52618135)
chr3 (91-209)||(54628924-54629041)
chr3 (47-209)||(26107297-26107458)
chr3 (137-209)||(6131242-6131314)
chr3 (91-198)||(31646304-31646410)
chr3 (82-209)||(50903249-50903375)
chr3 (88-186)||(55235261-55235359)
chr3 (47-209)||(52810414-52810575)
chr3 (106-208)||(1439904-1440005)
chr3 (47-207)||(20833028-20833187)
chr3 (83-186)||(52079999-52080091)
chr3 (82-139)||(39842562-39842619)
chr3 (91-150)||(10660615-10660673)
chr3 (47-131)||(23753472-23753556)
chr3 (47-150)||(10728709-10728811)
chr3 (47-150)||(39038076-39038178)
chr3 (82-131)||(539490-539539)
chr3 (82-131)||(37454932-37454981)
chr3 (143-208)||(44276506-44276571)
chr3 (82-200)||(6975817-6975924)
chr3 (165-209)||(33807689-33807733)
chr3 (82-138)||(23535890-23535946)
chr3 (82-150)||(50762118-50762185)
[»] chr2 (33 HSPs)
chr2 (45-209)||(24776391-24776554)
chr2 (45-209)||(16269727-16269890)
chr2 (45-209)||(20605272-20605435)
chr2 (45-209)||(31170635-31170798)
chr2 (45-209)||(14198588-14198751)
chr2 (49-209)||(35317102-35317261)
chr2 (45-209)||(12407416-12407579)
chr2 (45-209)||(43847682-43847845)
chr2 (45-209)||(305476-305639)
chr2 (45-209)||(5093058-5093221)
chr2 (49-190)||(1789482-1789622)
chr2 (45-209)||(32125286-32125452)
chr2 (45-209)||(22551774-22551937)
chr2 (45-178)||(44765811-44765943)
chr2 (49-209)||(9120166-9120325)
chr2 (47-190)||(33135661-33135803)
chr2 (47-209)||(28844593-28844754)
chr2 (47-198)||(10657444-10657594)
chr2 (91-209)||(18177349-18177466)
chr2 (82-190)||(26788859-26788966)
chr2 (91-209)||(25288241-25288358)
chr2 (99-209)||(43078653-43078762)
chr2 (47-131)||(3574885-3574969)
chr2 (48-139)||(26601280-26601371)
chr2 (47-150)||(28740353-28740455)
chr2 (47-150)||(7026642-7026744)
chr2 (88-209)||(10125311-10125421)
chr2 (49-209)||(13833443-13833592)
chr2 (91-131)||(379019-379059)
chr2 (82-131)||(6224635-6224684)
chr2 (47-124)||(215320-215397)
chr2 (82-150)||(3463745-3463812)
chr2 (82-131)||(21370638-21370687)
[»] scaffold0400 (1 HSPs)
scaffold0400 (48-201)||(15050-15202)
[»] scaffold0365 (1 HSPs)
scaffold0365 (48-201)||(15693-15845)
[»] scaffold0151 (1 HSPs)
scaffold0151 (45-209)||(38614-38776)
[»] chr1 (43 HSPs)
chr1 (45-209)||(19451817-19451980)
chr1 (45-209)||(45760018-45760181)
chr1 (45-209)||(21222175-21222338)
chr1 (45-208)||(50192560-50192723)
chr1 (45-199)||(45535972-45536125)
chr1 (48-209)||(35679137-35679297)
chr1 (45-209)||(35279700-35279863)
chr1 (45-209)||(47780739-47780902)
chr1 (45-201)||(6304269-6304425)
chr1 (45-201)||(49198286-49198440)
chr1 (45-209)||(49418112-49418275)
chr1 (45-209)||(28824382-28824544)
chr1 (49-209)||(29556136-29556296)
chr1 (45-209)||(47654360-47654524)
chr1 (45-208)||(32588963-32589125)
chr1 (45-189)||(48524347-48524490)
chr1 (45-183)||(730176-730314)
chr1 (91-209)||(31572206-31572323)
chr1 (82-209)||(9577441-9577567)
chr1 (45-209)||(37014649-37014812)
chr1 (47-209)||(6312604-6312765)
chr1 (47-209)||(29396397-29396558)
chr1 (47-208)||(51701610-51701770)
chr1 (91-209)||(9322509-9322626)
chr1 (47-209)||(46328072-46328233)
chr1 (82-209)||(48177471-48177597)
chr1 (91-209)||(15835062-15835179)
chr1 (82-209)||(25612222-25612348)
chr1 (45-209)||(33025540-33025694)
chr1 (91-209)||(28387402-28387519)
chr1 (91-150)||(955824-955882)
chr1 (47-131)||(18798521-18798605)
chr1 (47-131)||(49230916-49231000)
chr1 (49-150)||(29219318-29219418)
chr1 (47-150)||(38536157-38536259)
chr1 (47-150)||(38558375-38558477)
chr1 (47-207)||(5495117-5495266)
chr1 (91-139)||(31622537-31622585)
chr1 (82-174)||(51085860-51085951)
chr1 (91-208)||(48668795-48668901)
chr1 (45-104)||(22183398-22183457)
chr1 (143-184)||(47784501-47784542)
chr1 (154-182)||(955876-955904)
[»] scaffold0113 (1 HSPs)
scaffold0113 (45-207)||(38906-39067)
[»] scaffold0004 (1 HSPs)
scaffold0004 (45-209)||(102130-102293)
[»] scaffold0037 (1 HSPs)
scaffold0037 (45-209)||(100246-100409)
[»] scaffold0276 (1 HSPs)
scaffold0276 (45-209)||(548-711)
[»] scaffold0543 (1 HSPs)
scaffold0543 (91-209)||(10641-10758)
[»] scaffold0110 (1 HSPs)
scaffold0110 (91-209)||(39626-39743)
[»] scaffold0054 (1 HSPs)
scaffold0054 (91-209)||(36916-37033)
[»] scaffold1504 (1 HSPs)
scaffold1504 (82-209)||(936-1061)
[»] scaffold0042 (1 HSPs)
scaffold0042 (91-209)||(58085-58202)
[»] scaffold0306 (1 HSPs)
scaffold0306 (47-150)||(13919-14021)
[»] scaffold0152 (1 HSPs)
scaffold0152 (47-150)||(21306-21408)
[»] scaffold0922 (1 HSPs)
scaffold0922 (47-148)||(4237-4337)
[»] scaffold0839 (1 HSPs)
scaffold0839 (111-190)||(3720-3798)
[»] scaffold0347 (1 HSPs)
scaffold0347 (143-209)||(14892-14958)
[»] scaffold0007 (1 HSPs)
scaffold0007 (91-184)||(199906-199998)


Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 24501984 - 24501821
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24501984 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 24501886  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24501885 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 24501821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 26374601 - 26374438
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  26374601 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagatttt-gatg 26374503  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  26374502 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 26374438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 42938288 - 42938125
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42938288 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 42938190  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  42938189 gattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttc 42938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 2704990 - 2704827
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  2704990 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaaatttt-gatg 2704892  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  2704891 gattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttc 2704827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 7507070 - 7506907
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  7507070 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagatttt-gatg 7506972  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  7506971 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttc 7506907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 42937388 - 42937549
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||||  |||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42937388 gtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 42937484  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  42937485 gattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttc 42937549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 42735448 - 42735285
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||| |||||||||||||||||       |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  42735448 gtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagatttt-gatg 42735350  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| || ||||||| |||||||    
T  42735349 gattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttc 42735285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 49 - 208
Target Start/End: Complemental strand, 10392404 - 10392246
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||| ||||||||||       |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10392404 tattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggatt 10392306  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    || ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  10392305 ttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 5576792 - 5576628
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||||||||||||||||||        ||| |||| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||    
T  5576792 gtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaagaattgtttaataaaccagatttt-gat 5576694  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  5576693 ggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttc 5576628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 207
Target Start/End: Complemental strand, 23115339 - 23115179
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  23115339 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcagatttt-gatg 23115242  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatt 207  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||    
T  23115241 gattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 23115179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 41479132 - 41479285
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||||||| |||||||||||||||||               
T  41479132 gtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaatgattgtttaataaatca----------- 41479220  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||| |||||||||| |||||||    
T  41479221 gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttc 41479285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 208
Target Start/End: Complemental strand, 39467637 - 39467477
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  39467637 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatgga 39467539  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| || ||||||    
T  39467538 ttttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 10295550 - 10295388
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  10295550 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 10295452  T
Q  147 -ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
     |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  10295451 tttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 10295388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 14782304 - 14782143
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||    
T  14782304 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt-gatgga 14782206  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  14782205 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 14782143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 43959695 - 43959845
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||| ||||||||||||       | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  43959695 gtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttgatggat 43959793  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||          |||||||||||||||||||||||||||||| ||||||| |||||||    
T  43959794 tttgtg----------gtgaaattttagcatgaaaaagtctttaattaaaacatgagatttc 43959845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 44725979 - 44725818
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||    
T  44725979 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt-gatgga 44725881  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  44725880 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 44725818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 208
Target Start/End: Complemental strand, 18958896 - 18958736
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||| |||||    
T  18958896 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttaatgga 18958798  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || ||||||    
T  18958797 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 9288591 - 9288465
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||| ||||||||| ||||| ||||||| || |||    
T  9288591 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgaattttgtgggattttgtagtgtaattttaacaagaa 9288493  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  9288492 aaagtctttcatgaaaagatgagatttc 9288465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 43166861 - 43166698
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||  ||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||    
T  43166861 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatg 43166763  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||| | ||| ||||||| || |||||||| ||| ||||||| || |||||||    
T  43166762 gattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttc 43166698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 4403188 - 4403305
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||| ||||||||| ||||| ||||||| || ||||||||||||    
T  4403188 tattcaaaatcattcaaatttcgaaggattgtttaataaat-tgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtcttt 4403286  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  4403287 catgaaaatatgagatttc 4403305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 26856104 - 26856246
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||  || ||||||||||    
T  26856104 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattgga-ttttgatgga 26856202  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||| ||||||||| ||||| ||||||| || ||||||||||||    
T  26856203 ttttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 26856246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 19718050 - 19717889
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||  || |||| |||||    
T  19718050 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattgga-ttttaatgga 19717952  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  19717951 ttttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttc 19717889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 32711453 - 32711359
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 139  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32711453 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagatttt 32711359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 4950141 - 4950024
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||| |||| || |||| |||||||||| ||||||| |||||| ||| ||| ||||||||||||||||||||||||||||| | |||    
T  4950141 tattcaaaatcattcaagtttcaaaagattatttaataaattagatttt-gatggaatttgtggaattttctagtgaaattttagcatgaaaaaatattt 4950043  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||| |||||| |||||||    
T  4950042 catgcaaacataagatttc 4950024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 13478375 - 13478269
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||| || |||||||||||||||||||||||||| ||| ||| | |||||||| | ||||||| |||  |||||||||||||| |||||||||    
T  13478375 tattcaaaatcttttaaatttcgaaggattgtttaataaattaga-tttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  191 aatgaaaa 198  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 18306130 - 18305979
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||           ||||    
T  18306130 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat-----------tgga 18306042  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  18306041 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 18305979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 31623732 - 31623816
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  31623732 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 31623816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 32497562 - 32497713
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||           ||||    
T  32497562 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat-----------tgga 32497650  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || || ||||||||| ||||||| || |||||||    
T  32497651 ttttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttc 32497713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 39189939 - 39189824
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||| |||||||||||||||||||||||||||||||||   |  |||||||||||||   | |||||||||| |||||||| || |||||| |||||    
T  39189939 tattcaacatcattcaaatttcgaaggattgtttaataaattgaa--tttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  191 aatgaaaacatcagatttc 209  Q
     |||||||||| |||||||    
T  39189842 catgaaaacatgagatttc 39189824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 16362233 - 16362335
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || || ||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  16362233 ggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 16362331  T
Q  147 tttt 150  Q
    ||||    
T  16362332 tttt 16362335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 7466372 - 7466523
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || ||| |||       |||| ||| ||||||||||||||||||||| |||| ||||||||||||||           ||||    
T  7466372 ggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat-----------tgga 7466460  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  7466461 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 7466523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 8410523 - 8410423
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatggga--ttttctagtgaaattttagcatgaaaaagtct 188  Q
    |||||||||||||| |||||| ||||||||||||| |||||  ||  ||||||||||||| |||||  |||| |||||||||||||| |||| |||||||    
T  8410523 tattcaaaatcattgaaatttggaaggattgtttactaaattgga-ctttgatggattttgtgggattttttttagtgaaattttagtatgacaaagtct 8410425  T
Q  189 tt 190  Q
    ||    
T  8410424 tt 8410423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 4031392 - 4031343
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  4031392 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 4031343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 37857191 - 37857258
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    |||| ||| |||||||| ||||||||||||  ||||||||||||||||||  || ||||||||||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgga-ttttgatggatttt 37857258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 42305910 - 42305874
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaat 127  Q
    |||||||||| ||||||||||||||||||||||||||    
T  42305910 tattcaaaataattcaaatttcgaaggattgtttaat 42305874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 32711346 - 32711311
Alignment:
Q  165 tgaaattttagcatgaaaaagtctttaatgaaaaca 200  Q
    |||||||||||||||||||||||||| |||||||||    
T  32711346 tgaaattttagcatgaaaaagtctttcatgaaaaca 32711311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 47914302 - 47914465
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  47914302 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaataagatttt-gatg 47914400  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  47914401 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 47914465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 43581258 - 43581098
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43581258 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggat 43581160  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  43581159 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 43581098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 7718533 - 7718370
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7718533 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 7718435  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  7718434 gattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttc 7718370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 7719431 - 7719268
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  7719431 gtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt-gatg 7719333  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  7719332 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 7719268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 18914906 - 18914743
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  18914906 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagatttt-gatg 18914808  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  18914807 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 18914743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 30440832 - 30440995
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30440832 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 30440930  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||| |||||||    
T  30440931 gattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttc 30440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 34695309 - 34695472
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  34695309 gtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagatttt-gatg 34695407  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  34695408 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 34695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 40996820 - 40996657
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||||||||||||||||| |||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40996820 gtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 40996722  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  40996721 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 40996657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 47879204 - 47879367
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  47879204 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaatcagatttt-gatg 47879302  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  47879303 gattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 47879367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 973220 - 973383
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||        | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  973220 gtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 973318  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  973319 gattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttc 973383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 12893444 - 12893607
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||| |||||||||||||||||||||       ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  12893444 gtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt-gatg 12893542  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  12893543 gattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 12893607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 44343563 - 44343404
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||||||||||||       || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44343563 tattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggatt 44343465  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  44343464 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttc 44343404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 20275433 - 20275271
Alignment:
Q  46 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgg 145  Q
    |||||||||||||||||||||||||||||       ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20275433 tggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatgg 20275335  T
Q  146 attttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| | |||||| ||| |||||||    
T  20275334 attttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttc 20275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 39219543 - 39219385
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||| || | |||||||||||||||||||||| ||||||||    
T  39219543 tattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatcagatttt-gatggatt 39219446  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  39219445 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttc 39219385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 34009048 - 34009212
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtc-tagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||| ||||||||||||||       ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34009048 gtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgat 34009146  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||| ||| |||||||| | |||||||||||| ||||||||||| | |||||||| |||||||    
T  34009147 ggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttc 34009212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 32143042 - 32142925
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||     
T  32143042 tattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt-gatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttc 32142944  T
Q  191 aatgaaaacatcagatttc 209  Q
     || ||||||| |||||||    
T  32142943 cataaaaacatgagatttc 32142925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  86 agtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaag 185  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaag 43679589  T
Q  186 tct 188  Q
    |||    
T  43679590 tct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 47 - 208
Target Start/End: Original strand, 10068498 - 10068658
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||| | || |||||||       |||| ||| ||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||    
T  10068498 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaatttt-gatgga 10068596  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||    
T  10068597 ttttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagattt 10068658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 29614933 - 29614772
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  29614933 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 29614835  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  29614834 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 29614772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 7113529 - 7113643
Alignment:
Q  86 agtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaag 185  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||  |||||||||||||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagatttt-gatagattttgtgggattttctaggaaaattttagcatgaaaaag 7113627  T
Q  186 tctttaatgaaaacat 201  Q
    ||||| ||||||||||    
T  7113628 tctttcatgaaaacat 7113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 23101329 - 23101490
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  23101329 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 23101427  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  23101428 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 23101490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 12963767 - 12963874
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||| | |||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgatggattttgtgggattttctagtgaaattttagtaagaa 12963865  T
Q  182 aaagtcttt 190  Q
    |||||||||    
T  12963866 aaagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 28342413 - 28342539
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||| ||||| ||||||| || |||    
T  28342413 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaacaagaa 28342511  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  28342512 aaagtctttcatgaaaagatgagatttc 28342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 3022957 - 3023118
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  3022957 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 3023055  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||| ||| ||||||| || |||||||    
T  3023056 ttttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttc 3023118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 39784130 - 39784291
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||    
T  39784130 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggatttt-gatgga 39784228  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  39784229 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 39784291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 31638911 - 31639015
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31638911 gtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 31639009  T
Q  145 gatttt 150  Q
    ||||||    
T  31639010 gatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 208
Target Start/End: Original strand, 33382668 - 33382828
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       ||||  || |||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||    
T  33382668 ggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggatttt-gatgga 33382766  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || ||||||    
T  33382767 ttttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 7993217 - 7993334
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||| | ||||||||| ||||| ||||||| || ||||||||||||    
T  7993217 tattcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtcttt 7993315  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  7993316 catgaaaagataagatttc 7993334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 8675364 - 8675525
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||| ||| ||||||||||||||||||||||  |||||| ||||||    
T  8675364 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggatttt-gatgga 8675462  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||| ||||| ||||||| || |||||||    
T  8675463 ttttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 18838420 - 18838581
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || ||| |||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  18838420 ggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattgga-ttttgatgga 18838518  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||| ||| ||||||| || |||||||    
T  18838519 ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 18838581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 28034972 - 28034813
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||| || |||||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  |||||| ||||||||    
T  28034972 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggatttt-gatggatt 28034874  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || ||||||||| ||||| ||||||| ||  ||||||||||| ||||||| || |||||||    
T  28034873 ttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttc 28034813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 190
Target Start/End: Complemental strand, 9882405 - 9882263
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  9882405 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatgga 9882307  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||| ||||||||| ||||| |||||||  | ||||||||||||    
T  9882306 ttttgtgggattttgtagtgtaattttaagaagaaaaagtcttt 9882263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 43187482 - 43187366
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||| |||| ||||||||||||||  |||||| |||| ||||| | ||||||||||||||||||||| || ||||||||||||    
T  43187482 tattcaaaatcattcaaattttgaagcattgtttaataaattggatttt-gatgaattttgtcggattttctagtgaaattttaacaagaaaaagtcttt 43187384  T
Q  191 aatgaaaacatcagattt 208  Q
     ||||| |||| ||||||    
T  43187383 catgaagacatgagattt 43187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 25805767 - 25805862
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtc 187  Q
    ||||||||||||||||||||||| |||||||||||||||||  || || ||||||||||| |||||||||||| | |||||||||||||||||||||    
T  25805767 tattcaaaatcattcaaatttcgtaggattgtttaataaat-tgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 727595 - 727692
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||    
T  727595 tattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttg-----------tgggattttctagtgaaattttagcatgaaaaagtcttt 727683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 10676591 - 10676463
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||| || |||||||       ||||  |  |||||||||||||||||||||||||||||||||||||||||  || ||| ||||    
T  10676591 gtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-tttggatg 10676493  T
Q  145 gattttatgggattttctagtgaaatttta 174  Q
    |||||||||| ||||||| |||||||||||    
T  10676492 gattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 3797226 - 3797082
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||| |||||| |||||| ||||||||||||||||||| |||||||           
T  3797226 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttg------ 3797133  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
        |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  3797132 ----atgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat 3797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 9179912 - 9180062
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    ||||||||||||||||||| |||||||       |||| ||| ||| |||||||| | ||||| ||||||||||||||||||||           |||||    
T  9179912 gtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaat-----------tggat 9180000  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||||    
T  9180001 tttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttc 9180062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 12740439 - 12740564
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||  |  ||||||| |||||| ||||||||| ||||| ||||||| || ||     
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat--ggattttgatagattttgtgggattttatagtgtaattttaacaagag 12740536  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| || |||| || |||||||    
T  12740537 aaagtctttcataaaaagatgagatttc 12740564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 19810874 - 19810981
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||| || |||||||||||||||           |||||||| ||| ||||||||||||||||||||||| |||| ||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat-----------tggattttgtggaattttctagtgaaattttagcataaaaatgtcttt 19810962  T
Q  191 aatgaaaacatcagatttc 209  Q
     |||||||||| |||||||    
T  19810963 catgaaaacatgagatttc 19810981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 37972981 - 37972886
Alignment:
Q  102 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaa 198  Q
    ||||||||||||||||||| ||||||||||  |||||| ||||||||||  |||||||| ||||| ||||||| || |||||||||||| |||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggatttt-gatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaa 37972886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 32883814 - 32883948
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    ||||||||| |||||| || |||||||       |||| ||| ||||||||||||||||||||||||| ||||||||| |||||  || |||||||||||    
T  32883814 gtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattgga-ttttgatggat 32883912  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaa 183  Q
    ||  ||||||||| ||||| ||||||| || |||||    
T  32883913 ttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 44122069 - 44121967
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||        ||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  44122069 ggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 44121971  T
Q  147 tttt 150  Q
    ||||    
T  44121970 tttt 44121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 19251605 - 19251672
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  19251605 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 40460874 - 40460774
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||||    
T  40460874 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatggatt 40460776  T
Q  149 tt 150  Q
    ||    
T  40460775 tt 40460774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 208
Target Start/End: Complemental strand, 44256935 - 44256775
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       || | ||| ||||||||||||||||||||||||| |||||||||||||||  || ||| |||| |    
T  44256935 ggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgga-tttggatgaa 44256837  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||| | |||||||  |||| ||||||| || |||||||| ||| || |||| || ||||||    
T  44256836 ttttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 41827390 - 41827496
Alignment:
Q  102 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    ||||||| || |||||||||||||||||||  |||||| |||||||||| ||||||| | ||||| ||||||| || ||||| |||||| ||||||| ||    
T  41827390 attcaaaatttgaaggattgtttaataaattggatttt-gatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatat 41827488  T
Q  202 cagatttc 209  Q
     |||||||    
T  41827489 gagatttc 41827496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 509687 - 509789
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  509687 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattgga-ttttgatgga 509785  T
Q  147 tttt 150  Q
    ||||    
T  509786 tttt 509789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 37327958 - 37328060
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || || ||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||  || ||||||||||    
T  37327958 ggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat-tgaattttgatgga 37328056  T
Q  147 tttt 150  Q
    ||||    
T  37328057 tttt 37328060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 46405600 - 46405498
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  || ||||||||||    
T  46405600 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattgga-ttttgatgga 46405502  T
Q  147 tttt 150  Q
    ||||    
T  46405501 tttt 46405498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 47066770 - 47066819
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 47066819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 17001148 - 17001108
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17001148 tattcaaaatcattcaaatttcgaaggattgtttaataaat 17001108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 33892419 - 33892326
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttt 140  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| ||||||| |||||||  |||||||    
T  33892419 ggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggattttt 33892326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 188
Target Start/End: Complemental strand, 44623447 - 44623315
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||| ||||||||||||| |||||||       |||| |||||||||||||||||||| ||||| || || ||||||||||||           ||    
T  44623447 gtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaat-----------tg 44623359  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtct 188  Q
     ||||| ||| |||||||||||||||||||| ||||||||||||    
T  44623358 aattttgtggaattttctagtgaaattttagaatgaaaaagtct 44623315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 1470358 - 1470252
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||| |||||||||  ||| |||||||||| ||| ||||||| ||| | |||| |||||||||||  | |||||||||||||||||| |||||    
T  1470358 tattcaaaatcgttcaaattttaaagcattgtttaatgaattagatttt-gatag-ttttgtgggattttctgataaaattttagcatgaaaaaatcttt 1470261  T
Q  191 aatgaaaac 199  Q
      |||||||    
T  1470260 tttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 39028130 - 39028230
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||| || |||||||       |||| ||| ||||||||||| |||||||| |||| |||||||||||||||  || ||||||||||||    
T  39028130 tattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattgga-ttttgatggatt 39028228  T
Q  149 tt 150  Q
    ||    
T  39028229 tt 39028230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 29585589 - 29585647
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    ||||||||||||||||||||| ||||||||||||||||| |  || ||||||||||||||    
T  29585589 tattcaaaatcattcaaattttgaaggattgtttaataatttgga-ttttgatggatttt 29585647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  122 tttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    |||||||||| ||||||| |||||||||| || ||||||||||||| ||||||| |  || |||||||| || |||||||    
T  10617024 tttaataaattagatttt-gatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 44121973 - 44121919
Alignment:
Q  154 ggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  44121973 ggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattt 44121919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 447858 - 447894
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaat 127  Q
    |||| |||||||||||||||||||| |||||||||||    
T  447858 tatttaaaatcattcaaatttcgaatgattgtttaat 447894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 6197649 - 6197486
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6197649 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 6197551  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  6197550 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 6197486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 207
Target Start/End: Original strand, 1391658 - 1391819
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  1391658 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagatttt-gatg 1391756  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatt 207  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  1391757 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 1391819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 46 - 201
Target Start/End: Original strand, 28002700 - 28002854
Alignment:
Q  46 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgg 145  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  28002700 tggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcaga-ttttgatgg 28002798  T
Q  146 attttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    ||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28002799 attttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 28002854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 2300909 - 2300746
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||||||||||||| |||||||       ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2300909 gtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaaggattgtttaataaataagatttt-gatg 2300811  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  2300810 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 2300746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 29076632 - 29076795
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||| ||| ||||||||||||        |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29076632 gtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gat 29076730  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||    
T  29076731 ggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattt 29076795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 29111644 - 29111769
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  29111644 gtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggattttataggattttctagtgaaattttagcatgaa 29111742  T
Q  182 aaagtctttaatgaaaacatcagattt 208  Q
    ||| ||||| || ||||||| ||||||    
T  29111743 aaaatctttcataaaaacatgagattt 29111769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 7051879 - 7052042
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||| |||||||||||||| |||||||       |||  |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||    
T  7051879 gtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatg 7051977  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| | |||||||||||| |||||||||||||||||||| ||| || ||| ||| |||||||    
T  7051978 gattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttc 7052042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 31895733 - 31895893
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  31895733 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt-gatggat 31895831  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||||||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  31895832 tttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 31895893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 34759218 - 34759058
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||    
T  34759218 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattgga-ttttgatggat 34759120  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||| ||||| ||||||| || |||||| ||||| ||||||| || |||||||    
T  34759119 tttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 34759058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 34773489 - 34773606
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||  |||| ||||||| || ||||||||||||    
T  34773489 tattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtcttt 34773587  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  34773588 catgaaaagatgagatttc 34773606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 14262567 - 14262452
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||| || |||    
T  14262567 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaa 14262469  T
Q  182 aaagtctttaatgaaaa 198  Q
    ||||||||| |||||||    
T  14262468 aaagtctttcatgaaaa 14262452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 7497110 - 7497272
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||| ||||||||||||  || ||||||||    
T  7497110 gtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattgga-ttttgatg 7497208  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| | ||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  7497209 gattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 7497272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 31067573 - 31067680
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||||||||||||||||||||||           |||||||| ||||||||| ||||| ||||||| || ||||||||||||    
T  31067573 tattcaaaatcattcaaatttcgaaggattgtttaataaat-----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 31067661  T
Q  191 aatgaaaacatcagatttc 209  Q
     || |||| || |||||||    
T  31067662 cataaaaagatgagatttc 31067680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 30385191 - 30385142
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 30385142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 656999 - 657065
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaattt 111  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||| |||||||||||||||    
T  656999 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 4200541 - 4200494
Alignment:
Q  102 attcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 4200494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 3848290 - 3848330
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  3848290 tattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 21147102 - 21147265
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21147102 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 21147200  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  21147201 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 21147265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 7016907 - 7016747
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7016907 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggat 7016809  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  7016808 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttc 7016747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 33656212 - 33656049
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||        |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33656212 gtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 33656114  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  33656113 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttc 33656049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 5273089 - 5272927
Alignment:
Q  46 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgg 145  Q
    |||||||||||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  5273089 tggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt-gatgg 5272991  T
Q  146 attttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  5272990 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttc 5272927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 849182 - 849334
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  849182 gtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgata 849280  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaa 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  849281 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 139308 - 139471
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||| ||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  139308 gtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccaga-ttttgatg 139406  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| | |||||||| ||||||||||||  |||||||||||||| || ||||||| |||||||    
T  139407 gattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttc 139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 27459117 - 27458966
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||    
T  27459117 gtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaattagatttt-gatggat 27459020  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    ||| ||||||||||||||||||||||||||||||||| || || ||||||||||    
T  27459019 tttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacat 27458966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 6460830 - 6460965
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||| ||        ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  6460830 gtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcaga-ttttgatggat 6460928  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaa 184  Q
    |||  |||||||||||||||||||||| |||||||||    
T  6460929 tttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 32158069 - 32157902
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    |||||||||||||||||| | |||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||     
T  32158069 gtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgac 32157971  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaa---agtctttaatgaaaacatcagatttc 209  Q
    ||||||| |||||||||||||| ||||||||||| |||||   ||||||| |||||||||| |||||||    
T  32157970 ggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttc 32157902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 1152272 - 1152111
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||| ||||||||||||||||  |||||| ||||||    
T  1152272 ggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggatttt-gatgga 1152174  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  1152173 ttttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttc 1152111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 39852417 - 39852543
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||| ||||| ||||||| || |||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggatttt-gatggattttatgggattttgtagtgtaattttaacaagaa 39852515  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  39852516 aaagtctttcatgaaaagatgagatttc 39852543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 7947742 - 7947592
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| | |||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  7947742 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 7947644  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaa 198  Q
    |||| ||| ||||| ||||| ||||||| || |||||||||||| |||||||    
T  7947643 ttttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 7947592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 14000274 - 14000113
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||    
T  14000274 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt-gatgga 14000176  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  14000175 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 14000113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 208
Target Start/End: Complemental strand, 4550426 - 4550266
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  4550426 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 4550328  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||| ||| ||||| ||||| ||||||| || |||| ||||||| ||||||| || ||||||    
T  4550327 ttttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 13926003 - 13926110
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||| ||||| ||||||| || |||    
T  13926003 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaacaagaa 13926101  T
Q  182 aaagtcttt 190  Q
    |||||||||    
T  13926102 aaagtcttt 13926110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 9689693 - 9689855
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||||||||||||| |||||||       |||| ||| |||| ||||||||| |||||||||| |||||||| |||||| ||||||| ||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagatttt-gatg 9689790  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| | || |||||||| || ||||||||  |||||||||||||| || ||||||| |||||||    
T  9689791 gattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttc 9689855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 14465397 - 14465266
Alignment:
Q  46 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgg 145  Q
    ||||||||||||||||||||| ||| |||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||| || ||||||||     
T  14465397 tggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcgga-ttttgatga 14465299  T
Q  146 attttatgggattttctagtgaaattttagcat 178  Q
    ||||| ||| |||||||||| | ||||||||||    
T  14465298 attttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 4240621 - 4240519
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  4240621 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 4240523  T
Q  147 tttt 150  Q
    ||||    
T  4240522 tttt 4240519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 22746334 - 22746443
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||| ||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  22746334 ggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaat-tgaattttgatgga 22746432  T
Q  147 ttttatgggat 157  Q
    |||| ||||||    
T  22746433 ttttgtgggat 22746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 1461307 - 1461205
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  1461307 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 1461209  T
Q  147 tttt 150  Q
    ||||    
T  1461208 tttt 1461205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 5949189 - 5949247
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  5949189 tattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 5949247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 9220874 - 9220796
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaat 127  Q
    |||||||||||||||||| |||||||       ||||  ||||||||||||||||||||||||| ||||||||||||||    
T  9220874 tattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaat 9220796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 40013827 - 40013720
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||||||||||||||||||| |||           |||||||||  ||||||| ||||| ||||||| || ||||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaatcaat-----------tggattttaatggattttgtagtgtaattttaacaagaaaaagtcttt 40013739  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  40013738 catgaaaagatgagatttc 40013720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 37013951 - 37014035
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| | | ||||||||||||||||||||||||||| |||||||||||||    
T  37013951 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaat 37014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 16894073 - 16894044
Alignment:
Q  45 gtggtattcaatcaagactcttaatcactt 74  Q
    ||||||||||||||||||||||||||||||    
T  16894073 gtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 25331165 - 25331328
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  25331165 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcagatttt-gatg 25331263  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  25331264 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 25331328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 55302877 - 55303040
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55302877 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 55302975  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  55302976 gatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 55303040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 1044841 - 1045004
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  1044841 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagatttt-gatg 1044939  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  1044940 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttc 1045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 32951008 - 32950845
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32951008 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 32950910  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
     ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  32950909 aattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttc 32950845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 41881255 - 41881091
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||||||||||||||||||        || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41881255 gtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gat 41881157  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  41881156 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 41881091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 7007408 - 7007571
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7007408 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 7007506  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
     ||||| ||||||||||||||||||||||||||||||||  | ||| |||||||||| |||||||    
T  7007507 aattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttc 7007571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 12112979 - 12113142
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||| ||||||||||||||       ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  12112979 gtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttta-atg 12113077  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  12113078 gattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 12113142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 1112927 - 1113090
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  1112927 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt-gatg 1113025  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||| ||||| |||||||| ||||||||||||||| |||||||||| |||||||    
T  1113026 gattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttc 1113090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 22202049 - 22202212
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||| ||||||| || ||||||||||||||| | ||||| ||||    
T  22202049 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaatttt-gatg 22202147  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  22202148 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttc 22202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 25446084 - 25446227
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  25446084 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttgatg 25446182  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctt 189  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||    
T  25446183 gattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 30009849 - 30009686
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||| ||||||  || ||||||||||||||||||||||| ||||    
T  30009849 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagatttt-gatg 30009751  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  30009750 gattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 30009686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 34228755 - 34228592
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||| | ||||||||||||       |||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  34228755 gtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagatttt-gatg 34228657  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  34228656 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 34228592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 42786718 - 42786881
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  42786718 gtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcata-ttttgatg 42786816  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||| ||||||||||||||||||| ||| ||||||||||| |||||||||| |||||||    
T  42786817 gattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttc 42786881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 188
Target Start/End: Original strand, 28541732 - 28541874
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  28541732 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaga-ttttgatg 28541830  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtct 188  Q
    |||||| ||| |||||||||||||||||||||||||||||||||    
T  28541831 gattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 37046624 - 37046459
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||||||||||||||||||        ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  37046624 gtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgat 37046526  T
Q  144 ggattttatgggattttctagtg-aaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||| ||||||| || |||||||    
T  37046525 ggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttc 37046459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 41320853 - 41321007
Alignment:
Q  54 aatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatg 153  Q
    |||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtg 41320951  T
Q  154 ggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||||||||||| |||||||||||||| || ||||||| |||||||    
T  41320952 ggatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttc 41321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggattttgtgggattttctagtgaaattttagcatgaa 7249802  T
Q  182 aaagtct 188  Q
    |||||||    
T  7249801 aaagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 39479529 - 39479364
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttga 142  Q
    ||||||||||||||||||||||||||||||         | || ||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  39479529 gtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt-ga 39479431  T
Q  143 tggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||    
T  39479430 tggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttc 39479364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 3436631 - 3436790
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||||||||| ||        |||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  3436631 tattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatgaatt 3436729  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || ||||||||| ||||||||||||| ||||||||||| ||| |||||||||| |||||||    
T  3436730 ttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttc 3436790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 197
Target Start/End: Complemental strand, 19741080 - 19740929
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||| |||||||| ||||||||||       |||| ||| |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  19741080 gtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagatttt-gatg 19740982  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaa 197  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  19740981 gattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 46635814 - 46635657
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       || ||||  ||||||||||||||||||||||||||||||||||||||||| |||||           
T  46635814 gtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtttaataaataagatt------- 46635722  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||    
T  46635721 gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttc 46635657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 53275876 - 53276017
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||| | ||||||||||       ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  53275876 gtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcaga-ttttgatggat 53275974  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||| || ||||||||| | ||||||||||||||||||||||||    
T  53275975 tttgtgagattttctaataaaattttagcatgaaaaagtcttt 53276017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 209
Target Start/End: Complemental strand, 31314893 - 31314751
Alignment:
Q  56 tcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatggg 155  Q
    |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||           |||| ||||    
T  31314893 tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-----------ttttgtggg 31314805  T
Q  156 attttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  31314804 attttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 31314751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 23464993 - 23465117
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||||||||||||       |||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  23464993 tattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcaga-atttgatggatt 23465091  T
Q  149 ttatgggattttctagtgaaatttta 174  Q
    || |||||||||||||| ||||||||    
T  23465092 ttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 25504807 - 25504696
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25504807 tattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggatt 25504709  T
Q  149 ttatgggattttc 161  Q
    || ||||||||||    
T  25504708 ttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 5441440 - 5441601
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  5441440 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 5441538  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  5441539 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 5441601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 27768092 - 27768253
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  27768092 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 27768190  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  27768191 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 27768253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 54341180 - 54341341
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  54341180 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 54341278  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  54341279 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 54341341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 27454210 - 27454095
Alignment:
Q  85 tagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaa 184  Q
    ||||| ||||||||||||||||||||| ||| |||| |||||||||||||||||| |||| ||||| ||| |||||||||||||||||| ||||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagatttt-gatgaattttgtggaattttctagtgaaattttggcatgaaaaa 27454112  T
Q  185 gtctttaatgaaaacat 201  Q
    |||||| ||||||||||    
T  27454111 gtctttcatgaaaacat 27454095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 9163147 - 9163245
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||| ||||||||||||||||||||||||||    
T  9163147 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaatta-aattttgatggattttgtggaattttctagtgaaattttagcatgaa 9163245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 24131097 - 24130990
Alignment:
Q  102 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatg-aaaaagtctttaatgaaaaca 200  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||| ||||| |||||||||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagatttt-gatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaaca 24130999  T
Q  201 tcagatttc 209  Q
    | |||||||    
T  24130998 tgagatttc 24130990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 208
Target Start/End: Original strand, 37915863 - 37916023
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  37915863 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 37915961  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||| ||||||||| ||||| | ||||| || ||||||||| || ||||||| || ||||||    
T  37915962 ttttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 37828537 - 37828411
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||| ||||| |||||||  | |||    
T  37828537 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaaaaagaa 37828439  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  37828438 aaagtctttcatgaaaagatgagatttc 37828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 51320957 - 51321118
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  51320957 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 51321055  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||  ||||| ||||| ||||||| || |||||||| ||| ||||||| || |||||||    
T  51321056 ttttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttc 51321118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 44770979 - 44770856
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||| | |||||||| |||||||||||||||||||||||  | ||||||||||||    
T  44770979 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgg-tggattttgtgggattttctagtgaaattttaagaagaaaaagtcttt 44770881  T
Q  191 aatgaaaacatcagatttcagattg 215  Q
     ||||  |||| |||||||| ||||    
T  44770880 catgacgacatgagatttcatattg 44770856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 54853637 - 54853477
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||| || |||||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  |||||| |||||||    
T  54853637 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggatttt-gatggat 54853539  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||| ||||| ||||||| || |||||| ||||| ||||||| || |||||||    
T  54853538 tttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 54853477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 48261198 - 48261324
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| ||||||||| ||||| ||||||| || |||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaacaagaa 48261296  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||| ||||||| || |||||||    
T  48261297 aaaatctttcatgaaaatatgagatttc 48261324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 32322127 - 32322288
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  32322127 ggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatgga 32322225  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| |||||||  | ||||| |||||| || |||| || |||||||    
T  32322226 ttttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttc 32322288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 39307425 - 39307262
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||| |||| |||| ||       |||| ||| |||||| ||||||||||||||| || |||| |||||| |||  || ||||||||    
T  39307425 gtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattatttaatgaatt-gagttttgatg 39307327  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
     ||||| ||||||||||||||||||||||| ||||||||||| | | || ||||||| |||||||    
T  39307326 aattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttc 39307262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 40537276 - 40537169
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||| |||          ||||||||||||||||||||||||||    
T  40537276 tattcaaaatcatttaaatttcgaatgattgtttaataaatctgatttt-gatggattttgtgg----------tgaaattttagcatgaaaaagtcttt 40537188  T
Q  191 aatgaaaacatcagatttc 209  Q
     |||||||||| |||||||    
T  40537187 catgaaaacatgagatttc 40537169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 23987250 - 23987352
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||| ||| || |||||||       |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  23987250 ggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgatgga 23987348  T
Q  147 tttt 150  Q
    ||||    
T  23987349 tttt 23987352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 41725196 - 41725319
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||||||||||||||||||||||||| |||||||||||   |||||  || |||||||| ||||| ||||||||| ||||| ||||||| || |||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtt---taaattgga-ttttgatgaattttgtgggattttatagtgtaattttaacaagaa 41725291  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||| ||||||| || |||||||    
T  41725292 aaaatctttcatgaaaagatgagatttc 41725319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 8711991 - 8712063
Alignment:
Q  137 ttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| || ||||||| |||||||    
T  8711991 ttttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttc 8712063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 12913304 - 12913411
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||| |||||||||||||||||||           |||||||| ||||||||||||||||||||||| || |||||||| |||    
T  12913304 tattcaaaatcattcaaattttgaaggattgtttaataaat-----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtattt 12913392  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||| |||| |||||||    
T  12913393 catgaagacatgagatttc 12913411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 56445471 - 56445364
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||||||| |||||||||||||||           |||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  56445471 tattcaaaatcattcaaatttcgaatgattgtttaataaat-----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtcttt 56445383  T
Q  191 aatgaaaacatcagatttc 209  Q
     || || |||| |||||||    
T  56445382 cataaagacatgagatttc 56445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 28371004 - 28371086
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaatttta 174  Q
    |||||||||||||||||||||  ||||||||||||||||||  || ||||| || ||||| |||||||||||||||||||||||    
T  28371004 tattcaaaatcattcaaattttaaaggattgtttaataaat-tgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 49834983 - 49834899
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  49834983 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 49834899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 11090435 - 11090501
Alignment:
Q  143 tggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttc 11090501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 29649837 - 29649735
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  29649837 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattgga-ttttgatgga 29649739  T
Q  147 tttt 150  Q
    ||||    
T  29649738 tttt 29649735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 24736460 - 24736532
Alignment:
Q  137 ttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||||||||||| || |||||||||||||||||||| || ||| |||||||| |||||||||| |||||||    
T  24736460 ttttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttc 24736532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 28483935 - 28484019
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  28483935 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 28484019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 30967469 - 30967318
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||           ||||    
T  30967469 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat-----------tgga 30967381  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||| ||||| ||||||| || |||||||    
T  30967380 ttttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttc 30967318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 20021424 - 20021532
Alignment:
Q  102 attcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagc-atgaaaaagtctttaatgaaaaca 200  Q
    ||||||||||  |||||||||||||||||| ||| ||||| |||||||||||||||||| || |||||||||| | |  ||||| ||||| ||||| |||    
T  20021424 attcaaattttaaaggattgtttaataaattaga-ttttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagaca 20021522  T
Q  201 tcagatttca 210  Q
    | ||||||||    
T  20021523 taagatttca 20021532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 32684123 - 32684074
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 32684074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 36479366 - 36479251
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||| ||||||||||||||||||| ||||||||||  || ||||||||||||||           ||||||||||||||||  ||    
T  36479366 gtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattgga-ttttgatggatttt-----------tagtgaaattttagcaaaaa 36479279  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| |||||||||| |||||||    
T  36479278 aaagtcttttatgaaaacatgagatttc 36479251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 5800049 - 5800164
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||           |||||||| || |||||| ||| | ||||||| || |||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat-----------tggattttgtgagattttgtagagtaattttaacaagaa 5800137  T
Q  182 aaagtctttaatgaaaacatcagattt 208  Q
    ||||||||||||||||| || ||||||    
T  5800138 aaagtctttaatgaaaagataagattt 5800164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 49501681 - 49501597
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| |||  |||||||||||||||||||||||| |||||||||||||||    
T  49501681 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat 49501597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 49507746 - 49507662
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| |||  |||||||||||||||||||||||| |||||||||||||||    
T  49507746 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat 49507662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 41581905 - 41581824
Alignment:
Q  100 tcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaa 184  Q
    |||||||||||| |||  ||||||||||||||  ||||   |||  ||||| ||||||||||||||||||||||| |||||||||    
T  41581905 tcattcaaattttgaataattgtttaataaattggatt---gatatattttgtgggattttctagtgaaattttaacatgaaaaa 41581824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 50018322 - 50018371
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||||||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaat 50018371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 24131144 - 24131115
Alignment:
Q  45 gtggtattcaatcaagactcttaatcactt 74  Q
    ||||||||||||||||||||||||||||||    
T  24131144 gtggtattcaatcaagactcttaatcactt 24131115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 10139318 - 10139155
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10139318 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 10139220  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  10139219 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 10139155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 20498243 - 20498406
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20498243 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 20498341  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  20498342 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 20498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 996258 - 996095
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||| ||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  996258 gtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 996160  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  996159 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 996095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 3206377 - 3206214
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3206377 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 3206279  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  3206278 gattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttc 3206214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 19253861 - 19254024
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  19253861 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagatttt-gatg 19253959  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  19253960 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 19254024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 33807971 - 33807807
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33807971 gtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gat 33807873  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  33807872 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 33807807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 54625629 - 54625789
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  54625629 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagatttt-gatggat 54625727  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  54625728 tttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttc 54625789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 3999817 - 3999654
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3999817 gtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 3999719  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||    
T  3999718 gattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttc 3999654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 6589598 - 6589761
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||| ||       |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  6589598 gtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagatttt-gatg 6589696  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  6589697 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 6589761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 37820649 - 37820486
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||| ||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37820649 gtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 37820551  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||| |||||||||||||||||||||||||||| || ||||||| |||||||    
T  37820550 gattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttc 37820486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 29449026 - 29448867
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29449026 tattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggatt 29448928  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || |||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||    
T  29448927 ttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttc 29448867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 33996713 - 33996550
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33996713 gtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 33996615  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||  |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  33996614 gattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttc 33996550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 35337769 - 35337930
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  35337769 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcaga-ttttgatg 35337867  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  35337868 gattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 207
Target Start/End: Original strand, 40246878 - 40247039
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||| ||||||| ||       |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  40246878 gtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagatttt-gatg 40246976  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatt 207  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  40246977 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 40247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 44762206 - 44762046
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  44762206 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagatttt-gatggat 44762108  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  44762107 tttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttc 44762046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 53929300 - 53929138
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||| ||||| ||||||||||||||| ||||||| ||||    
T  53929300 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagatttt-gatg 53929202  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  53929201 gattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattt 53929138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 207
Target Start/End: Original strand, 25418400 - 25418561
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||| ||||||||||        ||||| | |||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  25418400 gtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaaggattgtttaataaatcagatttt-gatg 25418498  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatt 207  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||| |||||||||| |||||    
T  25418499 gattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagatt 25418561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 201
Target Start/End: Complemental strand, 51699651 - 51699497
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  51699651 gtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataagatttt-gatg 51699554  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
     ||||| ||||||||||||||||||||||||||||||||| |||||  |||||||||    
T  51699553 aattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacat 51699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 6035223 - 6035062
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||    
T  6035223 ggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagatttt-gatgga 6035125  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| |||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||    
T  6035124 ttttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttc 6035062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 1440124 - 1440006
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  1440124 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcaga-ttttgatg 1440026  T
Q  145 gattttatgggattttctag 164  Q
    ||||||||||||||||||||    
T  1440025 gattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 52114562 - 52114726
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||||||| ||||||||||        |||||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||||||    
T  52114562 gtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcaga-ttttgat 52114660  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
     |||||| ||| |||||||||| |||||||||||||||||| |||||  ||||||||| |||||||    
T  52114661 agattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttc 52114726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 17946324 - 17946485
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  || ||||||||||    
T  17946324 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattgga-ttttgatgga 17946422  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  17946423 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 17946485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 22057796 - 22057933
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||| |||||||||||| |||||||        ||||||| |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  22057796 gtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcaga-ttttgatg 22057894  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaa 183  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  22057895 gattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 29030040 - 29030174
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  29030040 gtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcaga-ttttgatg 29030137  T
Q  145 gattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||||| ||| |||||||| |||||||||| ||||||    
T  29030138 gattttgtggaattttctaatgaaattttaacatgaa 29030174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 40897180 - 40897341
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       ||||  || |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  40897180 ggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 40897278  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  40897279 ttttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 40897341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 18749683 - 18749809
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||| ||||| ||||||| || |||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaacaagaa 18749781  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  18749782 aaagtctttcatgaaaagatgagatttc 18749809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 5825142 - 5825259
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||| ||| |||||| ||||||||| |||||||||| ||||||||||||| ||||    
T  5825142 tattcaaaatcattcaaattttgaaggattgtttaataaattggatttt-gatagattttgtgggattttttagtgaaattctagcatgaaaaaggcttt 5825240  T
Q  191 aatgaaaacatcagatttc 209  Q
     |||||||||| |||||||    
T  5825241 catgaaaacatgagatttc 5825259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 36674300 - 36674139
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||    
T  36674300 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt-gatgga 36674202  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  36674201 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 36674139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 44906683 - 44906522
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || |||||||| |    
T  44906683 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgaa 44906585  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || ||||| |||||| ||||||| || |||||||    
T  44906584 ttttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttc 44906522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 48379193 - 48379354
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||| ||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  48379193 ggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat-tgaattttgatgga 48379291  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| |||||||  | ||||| |||||| ||||||| ||||||||||    
T  48379292 ttttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttc 48379354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 32580247 - 32580373
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||  |||||||| ||||| ||||||| || |||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgagggattttgtagtgtaattttaacaagaa 32580345  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  32580346 aaagtctttcatgaaaagatgagatttc 32580373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 34484156 - 34484039
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||| ||||| ||||||| || |||||| |||||    
T  34484156 tattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttt 34484058  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  34484057 catgaaaagatgagatttc 34484039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 190
Target Start/End: Complemental strand, 51737896 - 51737754
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  51737896 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 51737798  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||| ||||||||| | ||| ||||||| || ||||||||||||    
T  51737797 ttttgtgggattttgttgtgtaattttaacaagaaaaagtcttt 51737754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 11431562 - 11431723
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||| ||||||||||||||||||||||||||  || ||||| ||||    
T  11431562 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattgga-ttttggtgga 11431660  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  11431661 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 11431723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 201
Target Start/End: Original strand, 27899379 - 27899523
Alignment:
Q  46 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgg 145  Q
    |||||||||||||||||||||  ||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||||           |    
T  27899379 tggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca-----------g 27899467  T
Q  146 attttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    ||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27899468 attttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 27899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 52618135 - 52618009
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  52618135 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 52618037  T
Q  147 ttttatgggattttctagtgaaatttta 174  Q
    |||| ||||||||| ||||| |||||||    
T  52618036 ttttgtgggattttgtagtgtaatttta 52618009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 54628924 - 54629041
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| ||||||||| ||||| ||||||| || ||||||||||||    
T  54628924 tattcaaaatcattcaaatttcaaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 54629022  T
Q  191 aatgaaaacatcagatttc 209  Q
     || |||| || |||||||    
T  54629023 cataaaaagatgagatttc 54629041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 26107297 - 26107458
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  26107297 ggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 26107395  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| || |||||| ||||| ||||||| || |||||||| ||| || |||| || |||||||    
T  26107396 ttttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttc 26107458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 6131314 - 6131242
Alignment:
Q  137 ttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  6131314 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 6131242  T

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Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 31646410 - 31646304
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||||||| ||||||||||| |||  |||||| |||||||||| ||||||||| ||||| ||||||| || ||||||||||||    
T  31646410 tattcaaaatcattcaaatttcgaaagattgtttaatgaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 31646312  T
Q  191 aatgaaaa 198  Q
     |||||||    
T  31646311 catgaaaa 31646304  T

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Target: chr3; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 50903375 - 50903249
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| ||||||||||||||||||||  |||||||||||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||| || |||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaa 50903277  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||| ||||||| || |||||||    
T  50903276 aaaatcttttatgaaaatatgagatttc 50903249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 55235261 - 55235359
Alignment:
Q  88 tgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga-ttttatgggattttctagtgaaattttagcatgaaaaagt 186  Q
    |||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||| |||| |||||||||||| |||||||||||||| |||||||    
T  55235261 tgatattcaaaatcattcaaatttcgaaagattgtttaataaat-tggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

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Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 52810414 - 52810575
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| ||| |||||||||||||||  || ||||||||||    
T  52810414 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaat-tgaattttgatgga 52810512  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||| | ||||||| || |||||| ||||| ||||||| || |||||||    
T  52810513 ttttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 52810575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 1440005 - 1439904
Alignment:
Q  106 aaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcaga 205  Q
    |||||| ||||||||||||||||||| ||||||| ||| |||||| |||||||||||||| ||||||| | |||||||||||||| | |||||||| |||    
T  1440005 aaatttggaaggattgtttaataaattagatttt-gatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgaga 1439907  T
Q  206 ttt 208  Q
    |||    
T  1439906 ttt 1439904  T

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Target: chr3; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 207
Target Start/End: Original strand, 20833028 - 20833187
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||| | || |||||||       |||| ||| ||||||||||||||||||||  |||||||||||||||||||  || ||||||||||    
T  20833028 ggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattgga-ttttgatgga 20833126  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatt 207  Q
    |||| || |||||  ||||| ||||||| || |||||||| ||| ||||||| || |||||    
T  20833127 ttttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 52079999 - 52080091
Alignment:
Q  83 tctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaa 182  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||           |||||| |||||||||||| ||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca-----------gattttgtgggattttctaatgaaattttagcatgaaa 52080087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 39842619 - 39842562
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 139  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagatttt 39842562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 10660615 - 10660673
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  10660615 tattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatggatttt 10660673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 23753556 - 23753472
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  23753556 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 23753472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 10728811 - 10728709
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||| |||||||||||||||| |||||||||||||||||||  || ||||||||||    
T  10728811 ggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattgga-ttttgatgga 10728713  T
Q  147 tttt 150  Q
    ||||    
T  10728712 tttt 10728709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 39038076 - 39038178
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||| |||||||||||||||||||||| ||||||||||||||  || ||||||||||    
T  39038076 ggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattgga-ttttgatgga 39038174  T
Q  147 tttt 150  Q
    ||||    
T  39038175 tttt 39038178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 539539 - 539490
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 37454932 - 37454981
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  37454932 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat 37454981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 44276506 - 44276571
Alignment:
Q  143 tggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||||||| ||||||||||||||||||||||| || |||||| ||||| ||||| |||| ||||||    
T  44276506 tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattt 44276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||| ||| |||| |||||           |||| ||| |||||||||||||| |||||| ||||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat-----------tggaatttgtgggattttctagtaaaatttgagcatgaa 6975905  T
Q  182 aaagtctttaatgaaaaca 200  Q
    | ||||||| |||||||||    
T  6975906 acagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 33807733 - 33807689
Alignment:
Q  165 tgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 33807689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 138  Q
    |||| ||| ||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 50762185 - 50762118
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||| ||||||  || ||||||||||||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattgga-ttttgatggatttt 50762118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 24776391 - 24776554
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24776391 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 24776489  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24776490 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 24776554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 16269727 - 16269890
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16269727 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 16269825  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  16269826 gattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 16269890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 20605272 - 20605435
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  20605272 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagatttt-gatg 20605370  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  20605371 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 20605435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 31170798 - 31170635
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  31170798 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagatttt-gatg 31170700  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  31170699 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 31170635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 14198751 - 14198588
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14198751 gtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 14198653  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  14198652 gattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttc 14198588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 35317102 - 35317261
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35317102 tattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggatt 35317200  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  35317201 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttc 35317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 12407416 - 12407579
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||| ||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  12407416 gtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt-gatg 12407514  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  12407515 gattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttc 12407579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 43847682 - 43847845
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  43847682 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgtttaataaatcagaattt-gatg 43847780  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  43847781 gattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttc 43847845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 305639 - 305476
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||    
T  305639 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttc-gatg 305541  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| || ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  305540 gattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttc 305476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 5093221 - 5093058
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||||||||| |||||||||||       |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5093221 gtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt-gatg 5093123  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| || ||||||| |||||||    
T  5093122 gattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttc 5093058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 1789482 - 1789622
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||| ||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1789482 tattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga-ttttgatggatt 1789580  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    || |||||||||||| ||||||||||||||||||||||||||    
T  1789581 ttgtgggattttctaatgaaattttagcatgaaaaagtcttt 1789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 32125286 - 32125452
Alignment:
Q  45 gtggtattcaatcaagactcttaat---cacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttg 141  Q
    |||||||||||||||||||||||||   || ||       ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32125286 gtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-g 32125384  T
Q  142 atggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| || |||||||    
T  32125385 atggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttc 32125452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 22551937 - 22551774
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||| ||||||||||       |||||||| |||||||||| |||||||||||||| ||||||||| ||||| | ||||| ||||    
T  22551937 gtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaattaaatttt-gatg 22551839  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  22551838 gattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttc 22551774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 178
Target Start/End: Original strand, 44765811 - 44765943
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||| ||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  44765811 gtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataaga-ttttgatg 44765909  T
Q  145 gattttatgggattttctagtgaaattttagcat 178  Q
    |||||| |||||||||||||||||||||||||||    
T  44765910 gattttgtgggattttctagtgaaattttagcat 44765943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 9120166 - 9120325
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||| ||||||||||||        |||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||| ||||||||    
T  9120166 tattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagatttt-gatggatt 9120264  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || |||||||||||||||||||||||| ||| |||| ||||| |||||||||| |||||||    
T  9120265 ttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttc 9120325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 33135661 - 33135803
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  33135661 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 33135759  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||| ||||||||| ||||| ||||||| || ||||||||||||    
T  33135760 ttttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 33135803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 28844593 - 28844754
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  28844593 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattaga-ttttgatgga 28844691  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||| ||||| ||||| |||||||  | |||||||||||| || |||| || |||||||    
T  28844692 ttttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttc 28844754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 10657444 - 10657594
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  10657444 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatgga 10657542  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaa 198  Q
    |||| ||||||||| ||||| ||||||| || |||||||| ||| |||||||    
T  10657543 ttttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaa 10657594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 18177349 - 18177466
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||| ||||||||| ||||| ||||||| || ||||||||||||    
T  18177349 tattcaaaatcattcaaatttcgaaggattgtttaattaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 18177447  T
Q  191 aatgaaaacatcagatttc 209  Q
    ||| |||| || |||||||    
T  18177448 aataaaaagatgagatttc 18177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 26788859 - 26788966
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| ||||||||| ||||| ||||||| || |||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtgtaattttaacaagaa 26788957  T
Q  182 aaagtcttt 190  Q
    |||||||||    
T  26788958 aaagtcttt 26788966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 25288241 - 25288358
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||| ||||||||| ||||| ||||||| || || || ||||||    
T  25288241 tattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtcttt 25288339  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  25288340 catgaaaagatgagatttc 25288358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 43078653 - 43078762
Alignment:
Q  99 atcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaa 198  Q
    ||||||||||||||||| |||||||||||||||  ||||||  ||||||||| ||||||||| ||||| ||||||| ||||||||||||||| || ||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttc-atggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaa 43078751  T
Q  199 catcagatttc 209  Q
     || |||||||    
T  43078752 gataagatttc 43078762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 3574885 - 3574969
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3574885 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 3574969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 26601371 - 26601280
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 139  Q
    |||||||||||||||||||||||||||       |||  ||| ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  26601371 gtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagatttt 26601280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 28740455 - 28740353
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  28740455 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 28740357  T
Q  147 tttt 150  Q
    ||||    
T  28740356 tttt 28740353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 7026642 - 7026744
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  7026642 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 7026740  T
Q  147 tttt 150  Q
    ||||    
T  7026741 tttt 7026744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 10125421 - 10125311
Alignment:
Q  88 tgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtc 187  Q
    ||||||||||||||||||||||||| ||||||||||||||||||           || ||||| ||||||||| ||||||||||||| || |||||||||    
T  10125421 tgatattcaaaatcattcaaatttcaaaggattgtttaataaat-----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtc 10125333  T
Q  188 tttaatgaaaacatcagatttc 209  Q
    ||| || ||||||  |||||||    
T  10125332 tttcataaaaacacgagatttc 10125311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 13833592 - 13833443
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||| || |||||||       ||||  || ||||||||||||||||||||| |||||||||||||||||||           ||||||    
T  13833592 tattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaat-----------tggatt 13833504  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || ||||||||| ||||| ||||||| || |||||||||||| |||| || || |||||||    
T  13833503 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttc 13833443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 379019 - 379059
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  379019 tattcaaaatcattcaaattttgaaggattgtttaataaat 379059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 6224684 - 6224635
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| |||||||||| ||||||||||||||||||| ||||||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaat 6224635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 215397 - 215320
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgttt 124  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||| ||| |||||||||||    
T  215397 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 3463745 - 3463812
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    |||| ||| |||| |||||||||||| |||| ||||||||||||||||||  || ||||||||||||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattgga-ttttgatggatttt 3463812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    |||| ||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 15202 - 15050
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15202 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggat 15104  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15103 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 15050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 15845 - 15693
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15845 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggat 15747  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15746 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 15693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 38776 - 38614
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  38776 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagatttt-gatg 38679  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  38678 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 38614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 19451980 - 19451817
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||| |||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  19451980 gtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagatttt-gatg 19451882  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  19451881 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 19451817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 45760181 - 45760018
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  45760181 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagatttt-gatg 45760083  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  45760082 gattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttc 45760018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 21222175 - 21222338
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21222175 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaaggattgtttaataaataagatttt-gatg 21222273  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  21222274 gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 21222338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 50192723 - 50192560
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  50192723 gtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt-gat 50192625  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  50192624 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 50192560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 45535972 - 45536125
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||||||||||||||||| |||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  45535972 gtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagatttt-gatg 45536070  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaac 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45536071 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 45536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 35679297 - 35679137
Alignment:
Q  48 gtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggat 147  Q
    |||||||||||||||||||||||||||       |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35679297 gtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatggat 35679199  T
Q  148 tttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  35679198 ttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttc 35679137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 35279700 - 35279863
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||| ||||||||||       |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  35279700 gtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagatttt-gatg 35279798  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||||    
T  35279799 gattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttc 35279863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 47780739 - 47780902
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||    
T  47780739 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagatttt-gatg 47780837  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||| |||||||    
T  47780838 gattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttc 47780902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 201
Target Start/End: Complemental strand, 6304425 - 6304269
Alignment:
Q  45 gtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||| ||| | |||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6304425 gtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gat 6304327  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6304326 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6304269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 201
Target Start/End: Complemental strand, 49198440 - 49198286
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||| |||||||||||||||||       ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49198440 gtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt-gatg 49198343  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacat 201  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49198342 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 49198286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 49418112 - 49418275
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||| |||||||||||||||||       |||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  49418112 gtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaga-ttttgatg 49418210  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||| ||||||| || |||||||    
T  49418211 gattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttc 49418275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 28824544 - 28824382
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  28824544 gtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaag-attgtttaataaatcagatttt-gatg 28824447  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||| || ||||||| |||||||    
T  28824446 gattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttc 28824382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 29556136 - 29556296
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  29556136 tattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagatttt-gatggatt 29556234  T
Q  149 ttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaa-acatcagatttc 209  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||| |||| |||||||    
T  29556235 ttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttc 29556296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 47654524 - 47654360
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||| ||||||||||||||        |||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  47654524 gtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcaga-ttttgat 47654426  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||    
T  47654425 ggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttc 47654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 32589125 - 32588963
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||| ||||||||||||||||| |||||||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  32589125 gtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggatttt-gatg 32589027  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||||| || |||||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  32589026 gattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 48524347 - 48524490
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||| |||||| ||||||||||||||       |||| ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  48524347 gtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcag-tttttgatg 48524445  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctt 189  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||    
T  48524446 gattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 730176 - 730314
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  730176 gtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatcaga-ttttgat 730274  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaa 183  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  730275 ggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 31572323 - 31572206
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  31572323 tattcaaaatcatttaaatttcgaaggattgtttaataaatcagatttt-gatggattttgtgggattttatagtgaaattttaggatgaaaaagtcttt 31572225  T
Q  191 aatgaaaacatcagatttc 209  Q
     |||||| ||| |||||||    
T  31572224 catgaaatcatgagatttc 31572206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 9577567 - 9577441
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||| || ||||||||||||||||||||| |||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggatttt-gatggattttgtgagattttctagtgaaattttagaatgaa 9577469  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||| ||||| |||||||||| |||||||    
T  9577468 aaaatctttcatgaaaacatgagatttc 9577441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 37014812 - 37014649
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||| | |||| |||||||       |||| |||||||||||||||||||||||||| || |||||||| ||||||  || ||||||||    
T  37014812 gtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaatt-gaattttgatg 37014714  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| | ||||||||||||||||||||||||||||||||||| | || ||||||| |||||||    
T  37014713 gattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttc 37014649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 6312604 - 6312765
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  6312604 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 6312702  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  6312703 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 6312765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 29396558 - 29396397
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  29396558 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 29396460  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  29396459 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 29396397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 208
Target Start/End: Original strand, 51701610 - 51701770
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  51701610 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga-ttttgatgga 51701708  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagattt 208  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || ||||||    
T  51701709 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 9322626 - 9322509
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||    
T  9322626 tattcaaaatcattcaaatttagaaggattgtttaataaatt-gaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtcttt 9322528  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  9322527 catgaaaagatgagatttc 9322509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 46328072 - 46328233
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||||||||||||||| |||  || ||||||||||    
T  46328072 ggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattgga-ttttgatgga 46328170  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||| ||||||||| ||||| ||||||| || |||||||||||| || |||| || |||||||    
T  46328171 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttc 46328233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 48177597 - 48177471
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||| || |||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaa 48177499  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  48177498 aaagtctttcatgaaaagatgagatttc 48177471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 15835179 - 15835062
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||| | ||||||||||||||||||  |||||| |||||||||||||||||||| ||||| ||||||| || ||||||||||||    
T  15835179 tattcaaaatcattcaaattgcaaaggattgtttaataaattggatttt-gatggattttatgggattttgtagtgtaattttaacaagaaaaagtcttt 15835081  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  15835080 catgaaaagatgagatttc 15835062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 25612222 - 25612348
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| ||||||||| ||||  ||||||| || |||    
T  25612222 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtataattttaacaagaa 25612320  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| ||||||| || |||||||    
T  25612321 aaagtctttcatgaaaagatgagatttc 25612348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 33025540 - 33025694
Alignment:
Q  45 gtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgat 143  Q
    ||||||||||||||| | |||||||||||||       |||| ||| ||||||||||||||||||||| |||||||||||||||| ||||              
T  33025540 gtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatca---------- 33025629  T
Q  144 ggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
     |||||| |||||||||||| | |||||||||||||||||||||||| |||||||||| |||||||    
T  33025630 -gattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 33025694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 28387519 - 28387402
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||| ||||  ||||||| ||  |||||||||||    
T  28387519 tattcaaattcattcaaatttcgaaggattgtttaataaattgga-ttttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtcttt 28387421  T
Q  191 aatgaaaacatcagatttc 209  Q
     || |||| || |||||||    
T  28387420 cataaaaagatgagatttc 28387402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 955824 - 955882
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatttt 150  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  955824 tattcaaaatcattcaaatttcgaagggttgtttaataaatcaga-ttttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 18798521 - 18798605
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  18798521 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 18798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 49230916 - 49231000
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 131  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  49230916 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 29219318 - 29219418
Alignment:
Q  49 tattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggatt 148  Q
    ||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||  |||||||||||||||||||  || ||||||||||||    
T  29219318 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattgga-ttttgatggatt 29219416  T
Q  149 tt 150  Q
    ||    
T  29219417 tt 29219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 38536259 - 38536157
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || || ||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  || ||||||||||    
T  38536259 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgga-ttttgatgga 38536161  T
Q  147 tttt 150  Q
    ||||    
T  38536160 tttt 38536157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 38558477 - 38558375
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || || ||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  || ||||||||||    
T  38558477 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgga-ttttgatgga 38558379  T
Q  147 tttt 150  Q
    ||||    
T  38558378 tttt 38558375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 207
Target Start/End: Complemental strand, 5495266 - 5495117
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||| ||||||| ||||||| ||||||||||           ||||    
T  5495266 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat-----------tgga 5495178  T
Q  147 ttttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatt 207  Q
    |||| ||||||||| ||||| ||||||| || ||||||||| || ||||||| || |||||    
T  5495177 ttttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 31622585 - 31622537
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 139  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||    
T  31622585 tattcaaaatcattcaaatttcaaaagattgtttaataaatcggatttt 31622537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaatttta 174  Q
    |||| ||| |||||||||| |||||||||| |||||||| || |||||||  |||||| |||| ||||| ||| ||||||| |||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggatttt-gatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 48668901 - 48668795
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||| |||||||||||||| |||||||||||||||           |||||||| ||||||| | ||||| ||||||| || ||||||||||||    
T  48668901 tattcaaaattattcaaatttcgaaagattgtttaataaat-----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtcttt 48668813  T
Q  191 aatgaaaacatcagattt 208  Q
     ||||||| || ||||||    
T  48668812 catgaaaagatgagattt 48668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 22183398 - 22183457
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcatt 104  Q
    ||||||||||||||||| ||||||||||||       |||||||| ||||||||||||||    
T  22183398 gtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 47784501 - 47784542
Alignment:
Q  143 tggattttatgggattttctagtgaaattttagcatgaaaaa 184  Q
    |||||||| || ||||||||||| ||||||||||||||||||    
T  47784501 tggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 955876 - 955904
Alignment:
Q  154 ggattttctagtgaaattttagcatgaaa 182  Q
    |||||||||||||||||||||||||||||    
T  955876 ggattttctagtgaaattttagcatgaaa 955904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 207
Target Start/End: Complemental strand, 39067 - 38906
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  39067 gtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagatttt-gatg 38969  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatt 207  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  38968 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 38906  T

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Target: scaffold0004 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 102130 - 102293
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  102130 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagatttt-gatg 102228  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||| || |||||||    
T  102229 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttc 102293  T

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Target: scaffold0037 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 100246 - 100409
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    |||||| |||||||||||||||||||||||       |||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  100246 gtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaaatttt-gatg 100344  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| |||| |||||||||||||||||| || |||||||||||| |||||||||| |||||||    
T  100345 gattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttc 100409  T

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Target: scaffold0276 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 711 - 548
Alignment:
Q  45 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatg 144  Q
    ||||||||||||||| ||||||||||||||        | ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  711 gtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatatttt-gatg 613  T
Q  145 gattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||| ||| |||||||||||||||||| | |||||||||||||| | |||||||| |||||||    
T  612 gattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttc 548  T

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Target: scaffold0543 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 10641 - 10758
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||    
T  10641 tattcaaaatcattcaaatttcaaaggattgtttaataaatt-gaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtcttt 10739  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  10740 catgaaaagatgagatttc 10758  T

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Target: scaffold0110 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 39743 - 39626
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||||||| ||||||||||| ||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||| || ||||||||||||    
T  39743 tattcaaaatcattcaaacttcgaaggattatttaataaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 39645  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  39644 catgaaaagataagatttc 39626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 37033 - 36916
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    |||||||||||||| ||||||||||| ||||||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||| || ||||||||||||    
T  37033 tattcaaaatcattaaaatttcgaagcattgtttaataaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 36935  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  36934 catgaaaagataagatttc 36916  T

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Target: scaffold1504 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 936 - 1061
Alignment:
Q  82 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaa 181  Q
    |||| ||| |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| ||||||||| ||||| ||||||| |  |||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-aga-ttttgatggattttgtgggattttgtagtgtaattttaactagaa 1033  T
Q  182 aaagtctttaatgaaaacatcagatttc 209  Q
    ||||||||| || |||| || |||||||    
T  1034 aaagtctttcattaaaatatgagatttc 1061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 58202 - 58085
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||| ||||||||| ||||  ||||||| || || ||| |||||    
T  58202 tattcaaaatcattcaaatttcgaatgattgtttaataaattgga-ttttgatggattttgtgggattttgtagtataattttaacaagagaaaatcttt 58104  T
Q  191 aatgaaaacatcagatttc 209  Q
     ||||||| || |||||||    
T  58103 catgaaaagatgagatttc 58085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 13919 - 14021
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  || ||||||||||    
T  13919 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgga-ttttgatgga 14017  T
Q  147 tttt 150  Q
    ||||    
T  14018 tttt 14021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 21408 - 21306
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  || ||||||||||    
T  21408 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgga-ttttgatgga 21310  T
Q  147 tttt 150  Q
    ||||    
T  21309 tttt 21306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 4237 - 4337
Alignment:
Q  47 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatgga 146  Q
    ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  || ||||||||||    
T  4237 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgga-ttttgatgga 4335  T
Q  147 tt 148  Q
    ||    
T  4336 tt 4337  T

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Target: scaffold0839 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 3798 - 3720
Alignment:
Q  111 tcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaagtcttt 190  Q
    ||||| |||||||||||||||  |||||| |||||||||| ||||||||| ||||| ||||||| || ||||| ||||||    
T  3798 tcgaatgattgtttaataaattggatttt-gatggattttgtgggattttgtagtgtaattttaacaagaaaaggtcttt 3720  T

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Target: scaffold0347 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 14892 - 14958
Alignment:
Q  143 tggattttatgggattttctagtgaaattttagcatgaaaaagtctttaatgaaaacatcagatttc 209  Q
    |||||||| ||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 14958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 199906 - 199998
Alignment:
Q  91 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttttgatggattttatgggattttctagtgaaattttagcatgaaaaa 184  Q
    |||| |||||||||||||||| ||| || ||||||||||||  || ||||||| |||||| || |||||| |||||||| ||||| || |||||    
T  199906 tatttaaaatcattcaaattttgaaagagtgtttaataaat-tgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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