View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9987_low_8 (Length: 239)
Name: NF9987_low_8
Description: NF9987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9987_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 6054243 - 6054020
Alignment:
| Q |
1 |
caaaacttagttcaaagccaaactaaaactttcatattttcgaatataaaggcagataaattcccacaagttgcaaaatgattgtacttcacaaaggtac |
100 |
Q |
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| T |
6054243 |
caaaacttagttcaaagccaaactaaaactttcatattttcgaatataaaggcagataaattgccacaagttgcaaaatgattgtacttcacaaaggtac |
6054144 |
T |
|
| Q |
101 |
aatatgattatccgcgatttacccatatagaagactgtcacactgtgaccgactaccaaattcattaaacaagcatcatcactattcagaaaattcatca |
200 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
6054143 |
aatatgattatccgcaatttacccatatagaagactgtcacactgtgaccgactaccaaattcattatacaagcatcatcactattcagaaaattcatca |
6054044 |
T |
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| Q |
201 |
aaacaacattgttcggtcgttctt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
6054043 |
aaacaacattgttcggtcgttctt |
6054020 |
T |
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