View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9990_low_4 (Length: 339)

Name: NF9990_low_4
Description: NF9990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9990_low_4
NF9990_low_4
[»] chr1 (31 HSPs)
chr1 (20-108)||(32797516-32797604)
chr1 (20-108)||(32380763-32380851)
chr1 (23-108)||(24851817-24851902)
chr1 (20-108)||(9781969-9782057)
chr1 (20-108)||(3707980-3708069)
chr1 (20-105)||(29168275-29168360)
chr1 (24-108)||(9528553-9528637)
chr1 (20-108)||(10822719-10822807)
chr1 (20-108)||(14167394-14167482)
chr1 (20-108)||(29862125-29862213)
chr1 (20-108)||(34096257-34096345)
chr1 (20-104)||(34432120-34432204)
chr1 (20-90)||(24589807-24589877)
chr1 (20-108)||(36551730-36551818)
chr1 (21-108)||(28658561-28658648)
chr1 (22-108)||(28948368-28948454)
chr1 (25-93)||(31652979-31653047)
chr1 (25-93)||(37346520-37346588)
chr1 (25-93)||(43190132-43190200)
chr1 (20-82)||(15417920-15417982)
chr1 (25-93)||(13012560-13012628)
chr1 (25-93)||(14334644-14334712)
chr1 (22-93)||(5985061-5985132)
chr1 (28-87)||(33040725-33040784)
chr1 (25-93)||(3427732-3427800)
chr1 (22-93)||(25257491-25257560)
chr1 (20-108)||(37922539-37922627)
chr1 (24-90)||(30324597-30324663)
chr1 (20-70)||(47656062-47656112)
chr1 (41-105)||(8829478-8829542)
chr1 (20-60)||(38218737-38218777)
[»] chr3 (44 HSPs)
chr3 (22-108)||(25322202-25322288)
chr3 (20-108)||(20509839-20509927)
chr3 (20-108)||(13748203-13748291)
chr3 (20-108)||(25701110-25701198)
chr3 (26-105)||(19878792-19878871)
chr3 (32-101)||(47750628-47750697)
chr3 (20-104)||(212845-212929)
chr3 (20-108)||(7899402-7899490)
chr3 (24-106)||(21157447-21157529)
chr3 (23-104)||(38888783-38888864)
chr3 (24-108)||(2566956-2567040)
chr3 (25-93)||(30787274-30787342)
chr3 (25-93)||(35390233-35390301)
chr3 (20-108)||(52684674-52684762)
chr3 (20-95)||(28548384-28548459)
chr3 (20-83)||(41741850-41741913)
chr3 (24-91)||(45347916-45347983)
chr3 (26-108)||(21006052-21006134)
chr3 (20-105)||(13352878-13352963)
chr3 (20-108)||(29916117-29916206)
chr3 (20-108)||(29965270-29965359)
chr3 (25-94)||(33241219-33241288)
chr3 (20-89)||(39664762-39664831)
chr3 (20-108)||(22289427-22289515)
chr3 (25-93)||(22311216-22311284)
chr3 (25-93)||(28882243-28882311)
chr3 (21-105)||(45056985-45057069)
chr3 (22-93)||(42464300-42464371)
chr3 (35-104)||(47642357-47642426)
chr3 (20-104)||(983521-983605)
chr3 (24-108)||(2123034-2123118)
chr3 (20-108)||(28968858-28968946)
chr3 (22-93)||(10224319-10224390)
chr3 (20-106)||(48333289-48333375)
chr3 (20-93)||(19349304-19349377)
chr3 (28-93)||(48123712-48123777)
chr3 (56-108)||(19421769-19421821)
chr3 (25-93)||(22610440-22610508)
chr3 (25-93)||(45532226-45532294)
chr3 (25-93)||(52121650-52121718)
chr3 (26-93)||(25936242-25936309)
chr3 (38-93)||(50286923-50286978)
chr3 (20-70)||(48334268-48334318)
chr3 (41-93)||(52505002-52505054)
[»] chr8 (32 HSPs)
chr8 (20-108)||(20182714-20182802)
chr8 (24-105)||(32933-33014)
chr8 (20-108)||(27108878-27108966)
chr8 (20-108)||(40412890-40412978)
chr8 (20-105)||(3892292-3892377)
chr8 (35-108)||(37372577-37372650)
chr8 (20-108)||(5818036-5818124)
chr8 (20-104)||(27886528-27886612)
chr8 (20-104)||(27945186-27945270)
chr8 (20-104)||(27968443-27968527)
chr8 (20-104)||(28025429-28025513)
chr8 (20-108)||(28737845-28737933)
chr8 (23-108)||(8170792-8170877)
chr8 (20-108)||(7411949-7412037)
chr8 (20-104)||(41098650-41098734)
chr8 (25-94)||(25022639-25022708)
chr8 (25-93)||(12579693-12579761)
chr8 (25-93)||(19436738-19436806)
chr8 (25-93)||(19572887-19572955)
chr8 (22-93)||(28875726-28875797)
chr8 (25-93)||(6028978-6029046)
chr8 (25-93)||(32877943-32878011)
chr8 (25-93)||(42949555-42949623)
chr8 (22-108)||(5540293-5540379)
chr8 (28-93)||(32638381-32638446)
chr8 (25-93)||(32760240-32760308)
chr8 (25-93)||(36484309-36484377)
chr8 (25-93)||(43770868-43770936)
chr8 (22-93)||(45216381-45216452)
chr8 (28-93)||(19947542-19947607)
chr8 (38-93)||(37669454-37669509)
chr8 (41-105)||(30804541-30804605)
[»] chr7 (39 HSPs)
chr7 (20-108)||(36757695-36757783)
chr7 (20-108)||(36767219-36767307)
chr7 (20-108)||(44270064-44270152)
chr7 (20-108)||(554595-554683)
chr7 (28-108)||(11058758-11058838)
chr7 (20-105)||(36763475-36763560)
chr7 (20-108)||(21180162-21180250)
chr7 (20-104)||(35136355-35136439)
chr7 (20-108)||(15878107-15878195)
chr7 (20-108)||(23078792-23078880)
chr7 (20-108)||(9249994-9250082)
chr7 (20-108)||(9283544-9283632)
chr7 (24-108)||(24956569-24956653)
chr7 (20-108)||(25969851-25969939)
chr7 (20-108)||(35160210-35160298)
chr7 (20-104)||(44959020-44959104)
chr7 (20-108)||(48153867-48153955)
chr7 (38-108)||(47719856-47719926)
chr7 (20-105)||(36413694-36413779)
chr7 (20-108)||(21409712-21409800)
chr7 (20-108)||(38065014-38065102)
chr7 (20-103)||(26973388-26973471)
chr7 (35-94)||(40053627-40053686)
chr7 (22-93)||(47237911-47237982)
chr7 (20-108)||(1399952-1400039)
chr7 (20-92)||(19820681-19820753)
chr7 (20-108)||(33454414-33454502)
chr7 (26-93)||(16563919-16563986)
chr7 (26-93)||(16601676-16601743)
chr7 (26-93)||(26773257-26773324)
chr7 (25-93)||(8029184-8029252)
chr7 (22-93)||(39521450-39521521)
chr7 (25-108)||(23969840-23969919)
chr7 (39-108)||(36661336-36661405)
chr7 (29-93)||(1042747-1042811)
chr7 (25-93)||(4292043-4292111)
chr7 (25-93)||(19510991-19511059)
chr7 (25-93)||(27397282-27397350)
chr7 (41-105)||(3393250-3393314)
[»] chr2 (31 HSPs)
chr2 (20-108)||(31235869-31235957)
chr2 (20-108)||(4355637-4355725)
chr2 (20-108)||(40536542-40536630)
chr2 (21-108)||(34146527-34146614)
chr2 (20-106)||(5588365-5588451)
chr2 (20-105)||(1005840-1005925)
chr2 (20-108)||(4562114-4562202)
chr2 (20-108)||(14824464-14824552)
chr2 (20-104)||(10573833-10573918)
chr2 (20-105)||(12206315-12206400)
chr2 (20-105)||(28746365-28746450)
chr2 (20-93)||(44156937-44157010)
chr2 (20-108)||(3564165-3564252)
chr2 (24-108)||(24585861-24585945)
chr2 (20-108)||(35996856-35996944)
chr2 (20-108)||(45158859-45158947)
chr2 (20-83)||(14216940-14217003)
chr2 (20-105)||(3545264-3545349)
chr2 (22-108)||(2319621-2319707)
chr2 (22-108)||(22485140-22485226)
chr2 (25-93)||(18301461-18301529)
chr2 (25-93)||(20537214-20537282)
chr2 (22-93)||(4169682-4169753)
chr2 (35-93)||(40431742-40431800)
chr2 (28-93)||(12819688-12819753)
chr2 (25-93)||(5371448-5371516)
chr2 (25-93)||(6125059-6125127)
chr2 (29-93)||(40308004-40308068)
chr2 (20-108)||(21104820-21104907)
chr2 (41-104)||(33737744-33737807)
chr2 (29-93)||(6496840-6496904)
[»] chr4 (37 HSPs)
chr4 (25-108)||(7952821-7952904)
chr4 (20-108)||(30683365-30683453)
chr4 (20-108)||(31945932-31946020)
chr4 (24-105)||(51675116-51675197)
chr4 (20-108)||(1177303-1177391)
chr4 (20-108)||(24784719-24784807)
chr4 (20-108)||(24823459-24823547)
chr4 (20-108)||(40694395-40694483)
chr4 (20-108)||(47607426-47607514)
chr4 (20-108)||(52721701-52721789)
chr4 (20-108)||(3108988-3109076)
chr4 (35-105)||(42630176-42630246)
chr4 (20-104)||(36511635-36511719)
chr4 (20-108)||(39958035-39958123)
chr4 (21-108)||(24793415-24793502)
chr4 (20-102)||(2586668-2586750)
chr4 (20-104)||(258774-258858)
chr4 (25-93)||(43509600-43509668)
chr4 (20-108)||(55900831-55900919)
chr4 (20-108)||(14614829-14614910)
chr4 (20-102)||(17892601-17892683)
chr4 (24-93)||(44521733-44521802)
chr4 (25-93)||(5835316-5835384)
chr4 (25-93)||(52573073-52573141)
chr4 (22-93)||(5325178-5325249)
chr4 (22-93)||(14795895-14795966)
chr4 (41-108)||(22492895-22492962)
chr4 (41-108)||(36944016-36944083)
chr4 (39-93)||(49470638-49470692)
chr4 (25-90)||(51859138-51859203)
chr4 (25-93)||(41146491-41146559)
chr4 (29-93)||(28377385-28377449)
chr4 (41-104)||(27982158-27982221)
chr4 (23-66)||(46431647-46431690)
chr4 (52-93)||(3402763-3402804)
chr4 (41-105)||(4400731-4400795)
chr4 (41-97)||(11891925-11891981)
[»] chr5 (42 HSPs)
chr5 (27-108)||(39796656-39796737)
chr5 (20-108)||(1795719-1795807)
chr5 (20-108)||(26691964-26692052)
chr5 (20-108)||(26716598-26716686)
chr5 (20-108)||(26961696-26961784)
chr5 (20-108)||(26986338-26986426)
chr5 (20-108)||(27938484-27938572)
chr5 (20-104)||(3934492-3934576)
chr5 (20-104)||(25749935-25750019)
chr5 (20-103)||(9728093-9728176)
chr5 (22-104)||(21251813-21251895)
chr5 (20-108)||(1921108-1921196)
chr5 (20-108)||(7629371-7629459)
chr5 (20-108)||(30777093-30777181)
chr5 (20-108)||(41233642-41233730)
chr5 (20-108)||(42365806-42365894)
chr5 (22-109)||(14836657-14836744)
chr5 (24-106)||(5612160-5612242)
chr5 (20-105)||(3701413-3701498)
chr5 (20-89)||(30284283-30284352)
chr5 (20-108)||(43357465-43357551)
chr5 (20-108)||(6242713-6242801)
chr5 (22-108)||(39689890-39689976)
chr5 (19-105)||(27085698-27085788)
chr5 (25-93)||(5985640-5985708)
chr5 (20-104)||(9654079-9654163)
chr5 (20-108)||(18001661-18001749)
chr5 (26-93)||(10657333-10657400)
chr5 (22-93)||(30919032-30919103)
chr5 (20-108)||(34032697-34032781)
chr5 (20-83)||(35746099-35746162)
chr5 (26-108)||(17137945-17138026)
chr5 (20-108)||(22738175-22738266)
chr5 (22-93)||(26794161-26794232)
chr5 (20-81)||(11694466-11694527)
chr5 (22-93)||(1638952-1639021)
chr5 (21-108)||(11907638-11907719)
chr5 (52-108)||(15066538-15066594)
chr5 (37-108)||(5722324-5722395)
chr5 (41-103)||(12190645-12190707)
chr5 (41-86)||(10154313-10154358)
chr5 (41-105)||(21317404-21317468)
[»] chr6 (20 HSPs)
chr6 (20-108)||(13061058-13061146)
chr6 (20-105)||(13045065-13045150)
chr6 (20-108)||(6707723-6707811)
chr6 (20-108)||(27084299-27084387)
chr6 (20-108)||(32018443-32018531)
chr6 (21-108)||(11105634-11105721)
chr6 (20-108)||(3212916-3213004)
chr6 (20-103)||(234645-234728)
chr6 (20-105)||(19128482-19128567)
chr6 (20-91)||(7255282-7255353)
chr6 (20-104)||(10894201-10894286)
chr6 (20-108)||(3299384-3299472)
chr6 (20-104)||(26327646-26327730)
chr6 (25-93)||(32130222-32130290)
chr6 (53-108)||(13607497-13607552)
chr6 (22-108)||(7187938-7188024)
chr6 (25-93)||(8357767-8357835)
chr6 (20-90)||(4153245-4153315)
chr6 (46-86)||(22988838-22988878)
chr6 (46-86)||(23799518-23799558)
[»] scaffold0250 (1 HSPs)
scaffold0250 (25-93)||(6015-6083)
[»] scaffold0005 (2 HSPs)
scaffold0005 (20-108)||(202466-202547)
scaffold0005 (22-93)||(43765-43836)
[»] scaffold0060 (1 HSPs)
scaffold0060 (22-93)||(29804-29875)
[»] scaffold0285 (1 HSPs)
scaffold0285 (22-103)||(13729-13810)
[»] scaffold0112 (1 HSPs)
scaffold0112 (40-93)||(41276-41329)


Alignment Details
Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 32797604 - 32797516
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  32797604 ataggctcgtagcatatcaacataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaa 32797516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 32380763 - 32380851
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||    
T  32380763 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcgattacatacataatatatcccaa 32380851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 24851902 - 24851817
Alignment:
Q  23 ggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  24851902 ggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 24851817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 9782057 - 9781969
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| || | ||||||||||||    
T  9782057 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgacgattagtcaattacgtacacaatatatcccaa 9781969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 3707980 - 3708069
Alignment:
Q  20 ataggctcgt-agcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||| |||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  3707980 ataggctcgttagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 3708069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 29168360 - 29168275
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||||| |||||||||||||||| |||||| || |||||||||| ||||||||||||||||||||| | |||||||||    
T  29168360 ataggctcgtagcacatcaacataaatataaataatatcgacgattaagagagtgatgattagtcaattacatacacaatatatcc 29168275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 9528553 - 9528637
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| | |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  9528553 gctcgtagtacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 9528637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 10822807 - 10822719
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| | || ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  10822807 ataggctcgtagtacatgaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 10822719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 14167482 - 14167394
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  14167482 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaa 14167394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 29862213 - 29862125
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  29862213 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaa 29862125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 34096257 - 34096345
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||| | ||||||||||| | ||||| ||||||    
T  34096257 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgacgatcaatcaattacatacacaatatgtcccaa 34096345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 34432120 - 34432204
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||| ||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||||    
T  34432120 ataggctcttagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatatc 34432204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 24589807 - 24589877
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattac 90  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  24589807 ataggctcgtatcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattac 24589877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 36551818 - 36551730
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| | |||||||||||||||| ||||||||| |||||||||| ||||  |||| |||||||||| | ||||||||||||    
T  36551818 ataggctcgtaggacatcaacataaatataaataatattgacgattaagagagtgattgttagccaattacatacacaatatatcccaa 36551730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 28658561 - 28658648
Alignment:
Q  21 taggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||||||||||||||||  ||||||| ||||    
T  28658561 taggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatatgcaatatataccaa 28658648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 28948368 - 28948454
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||||||||||||||| | ||||||| ||||    
T  28948368 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaa 28948454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 31652979 - 31653047
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  31652979 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 31653047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 37346520 - 37346588
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  37346520 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 37346588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 43190200 - 43190132
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||    
T  43190200 ctcgtagcacattaacataaatataaataatattgacgattaagagagtgatgattagtcaaatacata 43190132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 15417982 - 15417920
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattag 82  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||| ||||||    
T  15417982 ataggctcgtatcatatcaacataaatataaataatattgacgattaagagagtgaagattag 15417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 13012560 - 13012628
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| |||||||||  ||||||||| || ||||||||||||||||||    
T  13012560 ctcgtagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaattacata 13012628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 14334712 - 14334644
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||| | || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  14334712 ctcgtagtacattaacataaatataaataatattgacgattaagagagtgttgattagtcaattacata 14334644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 5985132 - 5985061
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||||| |||||||||    
T  5985132 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtaaattacata 5985061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 33040784 - 33040725
Alignment:
Q  28 gtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 87  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| |||| |||| |||||    
T  33040784 gtagcatatcaacataaatataaataatattgacgattaagagagtgattattattcaat 33040725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 3427800 - 3427732
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||| ||| || | ||||||||||||||||    
T  3427800 ctcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaattacata 3427732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 25257560 - 25257491
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| ||  | |||||||||||||||    
T  25257560 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtg--gtttagtcaattacata 25257491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 37922627 - 37922539
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| || || |||||||||||||||| ||||||||  |||||||||| | || || | ||||||||||| | ||||||||||||    
T  37922627 ataggctcatatcacatcaacataaatataaataatattggcgattaagagagttataatcaatcaattacatacacaatatatcccaa 37922539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 30324663 - 30324597
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattac 90  Q
    |||||||||| || ||||||||||||| ||||||||  || ||||||| || | |||||||||||||    
T  30324663 gctcgtagcacattaacataaatataaataatattggcgaataagagagtggtcattagtcaattac 30324597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 47656112 - 47656062
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagag 70  Q
    |||||||||||||| |||||||||||||||| | ||| ||| |||||||||    
T  47656112 ataggctcgtagcacatcaacataaatataaattatactgacgattaagag 47656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 8829478 - 8829542
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||| |||||||||||||| || |||| |  ||  ||||||||||||||||||| ||||||||    
T  8829478 ataaatgtaagtaatattgataataaagaaagcgacaattagtcaattacatatatgatatatcc 8829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 38218777 - 38218737
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattga 60  Q
    |||||||||||| | |||||||||||||||| |||||||||    
T  38218777 ataggctcgtagtacatcaacataaatataaataatattga 38218737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 25322202 - 25322288
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  25322202 aggctcatagcatatctacataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatataatatatcccaa 25322288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 20509839 - 20509927
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  20509839 ataggctcgtagcacatcaacataaatataaataatagtgatgattaagagagtgatgattagtcaattacatacacaatatatcccaa 20509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 13748203 - 13748291
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  13748203 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaa 13748291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 25701198 - 25701110
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| | |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| | | ||||||||||||    
T  25701198 ataggctcgtaggacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacaaacacaatatatcccaa 25701110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 19878792 - 19878871
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  19878792 tcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcc 19878871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 47750628 - 47750697
Alignment:
Q  32 catatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatat 101  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| |||||    
T  47750628 catatcaacataaatataagtaatattgaagattaagagagtgatgattaatcaattacatatacaatat 47750697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 212929 - 212845
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||||||||| || |||||| ||||||||| ||||||||| |||||||||| |||| |||||||||||||||| ||||||||||    
T  212929 ataggctcgtaccacatcaacgtaaatataaataatattgacgattaagagagtgattattagtcaattacatacataatatatc 212845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 7899402 - 7899490
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| | ||||||||||||    
T  7899402 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaa 7899490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 21157447 - 21157529
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatccc 106  Q
    |||| ||||| |||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||    
T  21157447 gctcttagcacatcaacataaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccc 21157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 38888783 - 38888864
Alignment:
Q  23 ggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||| |||||| |||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||||| | ||||||||    
T  38888783 ggcttgtagcacatcaacataaatataaataatattgacgattaagacagtgatgattagtcaattacatacacaatatatc 38888864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 2566956 - 2567040
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  2566956 gctcctagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 2567040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 30787274 - 30787342
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| |||||||||||||||| ||||||| | |||||||||| |||||||||||||||||||||    
T  30787274 ctcgtagcacatcaacataaatataaataatattaacgattaagagagtgatgattagtcaattacata 30787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 35390301 - 35390233
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  35390301 ctcgtagcacattaacataaatataaataatattgacgattaagagaatgatgattagtcaattacata 35390233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 52684762 - 52684674
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| ||| || |||||||||||||||||| | ||||||| ||||    
T  52684762 atagactcgtagcacatcaacataaatataaataatattgacgattaaaagagtggtgattagtcaattacatacacaatatataccaa 52684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 28548459 - 28548384
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatata 95  Q
    |||||||||||||| |||||||||||||||| |||||||   |||||||||| |||| ||||||||||||||||||    
T  28548459 ataggctcgtagcacatcaacataaatataaataatattaccgattaagagagtgataattagtcaattacatata 28548384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 41741850 - 41741913
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagt 83  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  41741850 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagt 41741913  T

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Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 45347983 - 45347916
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattaca 91  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  45347983 gctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattaca 45347916  T

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Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 21006052 - 21006134
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| |||||||| ||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  21006052 tcgtagcacatcaacatgaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 21006134  T

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Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 13352878 - 13352963
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||| ||  |||| |||||||||||||||| | |||||||||    
T  13352878 ataggctcgtagcacatcaacatagatataaataatattgaggattaaaagtatgataattagtcaattacatacacaatatatcc 13352963  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 29916206 - 29916117
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgat-gattagtcaattacatatataatatatcccaa 108  Q
    |||| |||||||||||||||||||||||||| ||||||||  ||| |||||| |||| |||||||| |||||||| | ||||||||||||    
T  29916206 atagactcgtagcatatcaacataaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaa 29916117  T

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Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 29965359 - 29965270
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgat-gattagtcaattacatatataatatatcccaa 108  Q
    |||| |||||||||||||||||||||||||| ||||||||  ||| |||||| |||| |||||||| |||||||| | ||||||||||||    
T  29965359 atagactcgtagcatatcaacataaatataaataatattgtcgatcaagagagtgatggattagtcgattacataaacaatatatcccaa 29965270  T

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Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 33241288 - 33241219
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatat 94  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || |||||||||||||||||||    
T  33241288 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatat 33241219  T

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Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 39664831 - 39664762
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaatta 89  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||    
T  39664831 ataggctcgtagcacgtcaacataaatataaataatattgatgattaagagagtgacgatttgtcaatta 39664762  T

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Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 22289427 - 22289515
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| | |||||| ||||||||| ||||||||| |||||| ||| ||||||||| |||||||||||   ||||||||||||    
T  22289427 ataggctcgtagtacatcaacgtaaatataaataatattgacgattaatagagtgatgattattcaattacataccgaatatatcccaa 22289515  T

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Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 22311284 - 22311216
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  22311284 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 22311216  T

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Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 28882243 - 28882311
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  28882243 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 28882311  T

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Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 45056985 - 45057069
Alignment:
Q  21 taggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    ||||||||||||  |||||||||||||||| ||||||  |  ||||||||| ||||||||||||||||||||| | |||||||||    
T  45056985 taggctcgtagcgcatcaacataaatataaataatatcaacaattaagagagtgatgattagtcaattacatacacaatatatcc 45057069  T

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Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 42464300 - 42464371
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  42464300 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 42464371  T

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Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 47642426 - 47642357
Alignment:
Q  35 atcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| | ||||||||    
T  47642426 atcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatc 47642357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 983605 - 983521
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||| ||||||| | |||||| ||||||||| ||||||||| || ||||||| ||||||||| ||||||||||| | ||||||||    
T  983605 atagtctcgtagtacatcaacgtaaatataaataatattgacgaataagagagtgatgattaatcaattacatacacaatatatc 983521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 2123118 - 2123034
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||| |  |||||||||||||||||| |  | ||||||||||||    
T  2123118 gctcgtagaacatcaacataaatataaataatattgacgattaagtgggtgatgattagtcaattactttcacaatatatcccaa 2123034  T

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Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 28968946 - 28968858
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| ||||| |||||||||| |||||||||  ||||| ||| |||| ||||  |||||||||| | ||||||||||||    
T  28968946 ataggctcgtagcacatcaatataaatataaataatattgacaattaatagagtgattattaaccaattacatacacaatatatcccaa 28968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 10224319 - 10224390
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| |||||||||  ||||||||| || | ||||||||||||||||    
T  10224319 aggctcgtagcacattaacataaatataaataatattgacaattaagagagtgctcattagtcaattacata 10224390  T

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Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 48333375 - 48333289
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatccc 106  Q
    |||||||||||||| |||||||||||||||  |||||||||  ||||||||| ||| | | |||||| |||||| | ||||||||||    
T  48333375 ataggctcgtagcacatcaacataaatatatataatattgacaattaagagagtgacggtcagtcaactacatacacaatatatccc 48333289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 19349304 - 19349377
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||| || || |||||||||||||||| | ||||||| ||||||||||  || |||||||||||||||||    
T  19349304 ataggctcataacacatcaacataaatataaattatattgacgattaagagagcgacgattagtcaattacata 19349377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 48123777 - 48123712
Alignment:
Q  28 gtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  48123777 gtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 48123712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 19421821 - 19421769
Alignment:
Q  56 attgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| |||||||| ||||||||||||||||||||| | ||||||||||||    
T  19421821 attgatgcttaagagagtgatgattagtcaattacatacacaatatatcccaa 19421769  T

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Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 22610440 - 22610508
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||| ||||| || | ||||||||||||||||    
T  22610440 ctcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaattacata 22610508  T

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Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 45532226 - 45532294
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||  || | ||||||||||||||||    
T  45532226 ctcgtagcacattaacataaatataaataatattgacgattaagagggtggtcattagtcaattacata 45532294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 52121718 - 52121650
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| || |||| | |||||||||| || ||||||||||||||||||    
T  52121718 ctcgtagcacattaacataaatataaatattatttacgattaagagagtggtgattagtcaattacata 52121650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 25936242 - 25936309
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||| || |||||||||||||  |||||||| |||||||||| || | ||||||||||||||||    
T  25936242 tcgtagcacattaacataaatataaacaatattgacgattaagagagtggtcattagtcaattacata 25936309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 50286923 - 50286978
Alignment:
Q  38 aacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||||||| ||||||| | |||||||||| || ||||||||||||||||||    
T  50286923 aacataaatataaataatattaacgattaagagagtggtgattagtcaattacata 50286978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 48334318 - 48334268
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagag 70  Q
    |||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  48334318 ataggctcgtagcacatcaacataaatatatataatattgacgattaagag 48334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 52505002 - 52505054
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  52505002 ataaatataaataatattgacgattaagagagtggtcattagtcaattacata 52505054  T

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Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 20182802 - 20182714
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  20182802 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaa 20182714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 33014 - 32933
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||    
T  33014 gctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatcc 32933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 27108878 - 27108966
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||| ||||| |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  27108878 ataggctcgtaacacatcaacataactataaataatattgacaattaagagagtgatgattagtcaattacatacataatatatcccaa 27108966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 40412978 - 40412890
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  40412978 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 40412890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 3892377 - 3892292
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    ||||||||||| || |||||||||||||||| ||||||||| ||||||||||  |||||||||||||||||||| | |||||||||    
T  3892377 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagcgatgattagtcaattacatacacaatatatcc 3892292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 37372650 - 37372577
Alignment:
Q  35 atcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  37372650 atcaacataaatataaataatattgacgattaagagaatgatgattagtcaattacatacacaatatatcccaa 37372577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 5818036 - 5818124
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||||||||||||||||||||| ||||||||   ||||||| | |||||||||||||| |||||| | ||||||||||||    
T  5818036 ataggctcgtagcatatcaacataaatataaataatattgtccattaagaaagtgatgattagtcaactacatacacaatatatcccaa 5818124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 27886612 - 27886528
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||||||||| || |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||| | ||||||||    
T  27886612 ataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatc 27886528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 27945270 - 27945186
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||||||||| || |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||| | ||||||||    
T  27945270 ataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatc 27945186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 27968527 - 27968443
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||| |||||| || |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  27968527 atagactcgtatcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatc 27968443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 28025513 - 28025429
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||||||||| || |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||| | ||||||||    
T  28025513 ataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacacaatatatc 28025429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 28737933 - 28737845
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| | |||||||||||||||| ||| ||||| |||||| ||| ||||||||||||||||||||| | ||||||||||||    
T  28737933 ataggctcgtagaacatcaacataaatataaataacattgacgattaaaagagtgatgattagtcaattacatacacaatatatcccaa 28737845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 8170792 - 8170877
Alignment:
Q  23 ggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||||||||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  8170792 ggcttgtagcatatcaacgtaaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 8170877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 7412037 - 7411949
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| || ||||||||| ||| ||||||||| |||||||||| || ||||||||||||| |||| | ||||||||||||    
T  7412037 ataggctcgtagcacataaacataaatgtaaataatattgacgattaagagagtggtgattagtcaattgcataaacaatatatcccaa 7411949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 41098650 - 41098734
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||| |||||||| ||||||| ||||  ||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  41098650 ataggctcgtagcacatcaacattaatataaataattatgacgattaagagagtgatgattagtcaattacatacacaatatatc 41098734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 25022708 - 25022639
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatat 94  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || |||||||||||||||||||    
T  25022708 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatat 25022639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 12579693 - 12579761
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  12579693 ctcgtagcatattaacataaatataaataatattgacgattaagagagtgttcattagtcaattacata 12579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 19436806 - 19436738
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  19436806 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 19436738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 19572955 - 19572887
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  19572955 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 19572887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 28875726 - 28875797
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  28875726 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 28875797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 6029046 - 6028978
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||| |||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  6029046 ctcgcagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 6028978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 32878011 - 32877943
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||| ||| || ||||||||||||||||||    
T  32878011 ctcgtagcacattaacataaatataaataatattgacgattaatagagtggtgattagtcaattacata 32877943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 42949623 - 42949555
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||  ||||||||| |||||||||| || ||||||||||||||||||    
T  42949623 ctcgtagcacattaacataaatatacataatattgacgattaagagagtggtgattagtcaattacata 42949555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 5540379 - 5540293
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||  |||||||| | ||||||| ||||    
T  5540379 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtgttcattagtttattacatacacaatatataccaa 5540293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 32638381 - 32638446
Alignment:
Q  28 gtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||| | ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  32638381 gtagcatgttaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 32638446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 32760308 - 32760240
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||| ||||| || | ||||||||||||||||    
T  32760308 ctcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaattacata 32760240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 36484377 - 36484309
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||| ||||| || | ||||||||||||||||    
T  36484377 ctcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaattacata 36484309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 43770868 - 43770936
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||| ||| || | ||||||||||||||||    
T  43770868 ctcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaattacata 43770936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 45216381 - 45216452
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || || || |||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  45216381 aggctcgtaacacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacata 45216452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 19947542 - 19947607
Alignment:
Q  28 gtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||| || ||||||||||||| ||||||||| |||||| | | || ||||||||||||||||||    
T  19947542 gtagcacattaacataaatataaataatattgacgattaacacagtggtgattagtcaattacata 19947607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 37669509 - 37669454
Alignment:
Q  38 aacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||||||| ||||||||| |||| ||||| || | ||||||||||||||||    
T  37669509 aacataaatataaataatattgacgattgagagagtggtcattagtcaattacata 37669454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 30804541 - 30804605
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||| |||||||||||||| || |||| |  ||  ||||||||||||||||||| ||||||||    
T  30804541 ataaatgtaagtaatattgataataaagaaagcgacaattagtcaattacatatatgatatatcc 30804605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 36757695 - 36757783
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  36757695 ataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaa 36757783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 36767219 - 36767307
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  36767219 ataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacataatatatcccaa 36767307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 44270152 - 44270064
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  44270152 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacataaacaatatatcccaa 44270064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 554595 - 554683
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  554595 ataggctcgtagcacatcaacataaatataagtaatattaacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 554683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 11058838 - 11058758
Alignment:
Q  28 gtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||    
T  11058838 gtagcacatcaacataaatataagtaatattgacgattaagagaatgatgatttgtcaattacatatataatatatcccaa 11058758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 36763475 - 36763560
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  36763475 ataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaattacatacacaatatatcc 36763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21180250 - 21180162
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  21180250 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattagatatacaatatatcccaa 21180162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 35136439 - 35136355
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||| |||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||| ||||||||    
T  35136439 atagactcgtagcatatcaacataaatataagtaatattggcaattaagagaatgatgattagtcaattacatatacaatatatc 35136355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 15878107 - 15878195
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| | ||||||||||||    
T  15878107 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatatatcccaa 15878195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 23078792 - 23078880
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| ||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||| | ||||||||||||    
T  23078792 ataggctcatagcacatcaacataaatataaataatattgacgattaagagagtgatgattactcaattacatacacaatatatcccaa 23078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 9249994 - 9250082
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  9249994 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 9250082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 9283544 - 9283632
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  9283544 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 9283632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 24956653 - 24956569
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| || |||||||||||||||| |||||||||  ||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  24956653 gctcgtaacacatcaacataaatataaataatattgacaattaatagagtgatgattagtcaattacatacataatatatcccaa 24956569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 25969939 - 25969851
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  25969939 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 25969851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 35160298 - 35160210
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||||||| |||||||||||||||| ||| ||| || ||||||||| ||||||||||||||||||||| | ||||||||||||    
T  35160298 atagactcgtagcacatcaacataaatataaataacattaataattaagagagtgatgattagtcaattacatacacaatatatcccaa 35160210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 44959020 - 44959104
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||||||| | ||||| |||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  44959020 ataggctcgtagcatatccatataaacataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatc 44959104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 48153955 - 48153867
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||  ||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  48153955 ataggctcgtaacacatcaacataaatataaataatggtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 48153867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 47719856 - 47719926
Alignment:
Q  38 aacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  47719856 aacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacataatatataccaa 47719926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 36413779 - 36413694
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||| || ||||| ||| ||||||||||| | |||||||||    
T  36413779 atagactcgtagcacatcaacataaatataaataatattgatgattaagtgagtgatgcttaatcaattacatacacaatatatcc 36413694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21409800 - 21409712
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| ||||| |||||||||||| ||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  21409800 ataggctcatagcacatcaacataaatgtaaataatattgacgattaagagagtggtgattagtcaattacatacacaatatattccaa 21409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 38065102 - 38065014
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||| |||| ||||||||||||||||  ||||||||||||||||| | | |||||||||||||||||||   ||||||||||||    
T  38065102 ataggctcgaagcacatcaacataaatataaacaatattgatgattaagatagtcatgattagtcaattacatacgcaatatatcccaa 38065014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 26973471 - 26973388
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatat 103  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||  |||| ||||||||||||  |||||||    
T  26973471 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacaattactcaattacatatccaatatat 26973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 40053686 - 40053627
Alignment:
Q  35 atcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatat 94  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  40053686 atcaacataaatataaataatattgatgactaagagagtgatgattagtcaattacatat 40053627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 47237911 - 47237982
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||| | |||||||||||||||||||||    
T  47237911 aggctcgtagcacattaacataaatataaataatattgacgattaagaaagtgatgattagtcaattacata 47237982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 1399952 - 1400039
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| | ||||| |||||||||| ||||||||| |||||||| | |||| |||||||||||||||| | ||||||||||||    
T  1399952 ataggctcgtagtacatcaa-ataaatataaataatattgacgattaagatagtgattattagtcaattacatacacaatatatcccaa 1400039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 19820681 - 19820753
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 92  Q
    ||||| |||||||| |||||||||||||||| ||||||||| |||||| | | ||||||||||||||||||||    
T  19820681 ataggttcgtagcacatcaacataaatataaataatattgacgattaaaatagtgatgattagtcaattacat 19820753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 33454502 - 33454414
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| |||||||||||||||||||||||||| | |||  || |||||||||| |||||||||||| |||||||| | ||||||| ||||    
T  33454502 atagactcgtagcatatcaacataaatataaattataccgacgattaagagaatgatgattagtcgattacatacacaatatataccaa 33454414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 16563919 - 16563986
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  16563919 tcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 16563986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 16601743 - 16601676
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  16601743 tcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 16601676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 26773257 - 26773324
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  26773257 tcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 26773324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 8029252 - 8029184
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||    
T  8029252 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcacttacata 8029184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 39521521 - 39521450
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||| |||||||||||    
T  39521521 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattaatcaattacata 39521450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 23969840 - 23969919
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||| ||||||||||||||||    || ||| |||||||||| ||||||||||||||||||||| | ||| ||||||||    
T  23969840 ctcgtagcacatcaacataaatataa----tagtgacgattaagagagtgatgattagtcaattacatacacaatttatcccaa 23969919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 36661405 - 36661336
Alignment:
Q  39 acataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| ||||||||| |||||||||| || | ||||||||||||||||  |||||||| ||||    
T  36661405 acataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgtaatatataccaa 36661336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 1042747 - 1042811
Alignment:
Q  29 tagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||| || ||||||||||||| |||||||||  ||||||||| || ||||||||||||||||||    
T  1042747 tagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaattacata 1042811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 4292111 - 4292043
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| || |||| | |||||||||| || ||||||||||||||||||    
T  4292111 ctcgtagcacattaacataaatataaatactattaacgattaagagagtggtgattagtcaattacata 4292043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 19511059 - 19510991
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || |||| |||||||| |||||||||  ||||||||| || ||||||||||||||||||    
T  19511059 ctcgtagcacattaacaaaaatataaataatattgacaattaagagagtggtgattagtcaattacata 19510991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 27397282 - 27397350
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || || |||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  27397282 ctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacata 27397350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 3393314 - 3393250
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||| ||||||| |||||| || |||| |  ||  ||||||||||||||||||||||||||||    
T  3393314 ataaatgtaagtaagattgataataaagaaagcgacaattagtcaattacatatataatatatcc 3393250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 31235869 - 31235957
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  31235869 ataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaa 31235957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 4355725 - 4355637
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||| |||||||| |||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||    
T  4355725 ataggttcgtagcacatcaacataaatataaataatattgacgactaagagagtgatgattagtcaattacatacataatatatcccaa 4355637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 40536630 - 40536542
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| ||||    
T  40536630 ataggctcgtaaaatatcaacataaatataagtaatattgacgattaaaagagtgatgattagtcaattacatatacaatatattccaa 40536542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 34146614 - 34146527
Alignment:
Q  21 taggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| || | ||||||||||||    
T  34146614 taggatcgtagcatatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacctacacaatatatcccaa 34146527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 5588451 - 5588365
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatccc 106  Q
    |||| |||||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  5588451 atagactcgtaacacatcaacataaatataaataatattgatgattaagagaatgatgattagtcaattacatacacaatatatccc 5588365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 1005925 - 1005840
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  1005925 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcc 1005840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 4562202 - 4562114
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| |||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  4562202 ataggcttgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 4562114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 14824552 - 14824464
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  14824552 ataggctcgtaacacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 14824464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 10573918 - 10573833
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaa-tattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||| |||||||||||||||| ||| |||||| ||||||| || ||||||||||||||||||||||| ||||||||    
T  10573918 ataggctcgtagcacatcaacataaatataaataaatattgacgattaagtgagtgatgattagtcaattacatatacaatatatc 10573833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 12206400 - 12206315
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    ||||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||| | |||||||||    
T  12206400 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaaatacatacaaaatatatcc 12206315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 28746365 - 28746450
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    ||||||||||| || |||| ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||| | |||||||||    
T  28746365 ataggctcgtatcacatcagcataaatataaataatattgatgattaagagagtgacgattagtcaattacatacacaatatatcc 28746450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 44157010 - 44156937
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||||||    
T  44157010 ataggctcgtagcacatcaacataaatataaataatattgacgattaaaagagtgatgattagtcaattacata 44156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 3564252 - 3564165
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| |||||||||||||||| |||| | ||||||||||||    
T  3564252 ataggctcgtaacacatcaacataaatataa-taatattgacgattaagagagtgatgattagtcaattgcatacacaatatatcccaa 3564165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 24585945 - 24585861
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||| || ||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  24585945 gctcgtagcacataaacataaatataaataatattgacgattaagagagtgaagattagtcaattacatacagaatatatcccaa 24585861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 35996944 - 35996856
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||  | ||||||||||||    
T  35996944 atagactcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatgcacaatatatcccaa 35996856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 45158859 - 45158947
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  45158859 atagactcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 45158947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 14216940 - 14217003
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagt 83  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  14216940 ataggctcgtagcatatcaacataaatataaataatattgacgattaagagagtgatgattagt 14217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 3545264 - 3545349
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||| | |||||||||||||||| ||||||||| |||||||||| |||| |||| ||||||||||| | |||||||||    
T  3545264 ataggctcgtagtacatcaacataaatataaataatattgacgattaagagagtgataattaatcaattacatacacaatatatcc 3545349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 2319707 - 2319621
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| ||| |||| ||||||| ||||||||| |||||| ||| |||||||||||||||||  || | ||||||||||||    
T  2319707 aggctcgtagcacatccacattaatataaataatattgacgattaaaagaatgatgattagtcaattaattagaaaatatatcccaa 2319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 22485226 - 22485140
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| || || |||||||||| ||||||||| |||||||||| || | |||||||||||||||| | ||||||| ||||    
T  22485226 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaa 22485140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 18301529 - 18301461
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| |||||||||  ||||||||| || ||||||||||||||||||    
T  18301529 ctcgtagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaattacata 18301461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 20537282 - 20537214
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||| || || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  20537282 ctcgtaacacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 20537214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 4169682 - 4169753
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| |  | ||||||||||||||||    
T  4169682 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtagtcattagtcaattacata 4169753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 40431742 - 40431800
Alignment:
Q  35 atcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||||||| || |||||||||||||||| ||| ||||| |||||||||||||||    
T  40431742 atcaacataaatacaaataatattgatgattaacagagtgatgcttagtcaattacata 40431800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 12819753 - 12819688
Alignment:
Q  28 gtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||| || ||||||||||||| ||||||||| |||||| ||| || ||||||||||||||||||    
T  12819753 gtagcagattaacataaatataaataatattgacgattaatagagtggtgattagtcaattacata 12819688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 5371516 - 5371448
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||| | || ||||||||||||  ||||||||| |||||||||| || ||||||||||||||||||    
T  5371516 ctcgtagtacattaacataaatatacataatattgacgattaagagagtggtgattagtcaattacata 5371448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 6125127 - 6125059
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||| ||| || | ||||||||||||||||    
T  6125127 ctcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaattacata 6125059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 40308004 - 40308068
Alignment:
Q  29 tagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  40308004 tagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 40308068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21104907 - 21104820
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||  | ||||||||||| |||| ||||||||| |||||||||| |||| | ||  |||||||||| | ||||||||||||    
T  21104907 ataggctcgtaatacatcaacataaacataaataatattgacgattaagagagtgatta-taaccaattacatacacaatatatcccaa 21104820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 33737744 - 33737807
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||||| |||||||||||||||| |||| | | |  ||||||||||||||||||| |||||||    
T  33737744 ataaatacaagtaatattgatgataaagaaagtaacaattagtcaattacatatatgatatatc 33737807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 6496840 - 6496904
Alignment:
Q  29 tagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||| || ||||||||||||| ||||||||| |||| | ||| || | ||||||||||||||||    
T  6496840 tagcacattaacataaatataaataatattgacgattgaaagagtggtcattagtcaattacata 6496904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 7952821 - 7952904
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  7952821 ctcgtagcatatcaacataaatataagtaatattgacgattaaaagagtgatgattaatcaattacatatataatatatcccaa 7952904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 30683365 - 30683453
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| |||||||||||||||||||||||||| |||||| || |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  30683365 atagactcgtagcatatcaacataaatataaataatatcgacgattaagagagtgatgattaatcaattacatatataatatatcccaa 30683453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 31945932 - 31946020
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  31945932 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 31946020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 51675197 - 51675116
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||    
T  51675197 gctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatatacaatatatcc 51675116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1177391 - 1177303
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| | |||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  1177391 ataggctcgtagaacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatacacaatatatcccaa 1177303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 24784807 - 24784719
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  24784807 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 24784719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 24823459 - 24823547
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  24823459 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 24823547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 40694483 - 40694395
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||||||||||  |||||||||||||    
T  40694483 ataggctcgtagcacatcaacataaatataaataatatcgacaattaagagagtgatgattagtcaattacatacgtaatatatcccaa 40694395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 47607514 - 47607426
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||| | |||| |||||||||||||||| | ||||||||||||    
T  47607514 ataggctcgtagcacatcaacataaatataaataatattgacgattaagatagtgataattagtcaattacatacacaatatatcccaa 47607426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 52721789 - 52721701
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  52721789 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 52721701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 3108988 - 3109076
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||| ||| |||| ||||| |||||||||| | ||||||||||||    
T  3108988 ataggctcgtagcaaatcaacataaatataaataatattgacgattaaaagagtgattattagccaattacatacacaatatatcccaa 3109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 42630176 - 42630246
Alignment:
Q  35 atcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  42630176 atcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcc 42630246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 36511635 - 36511719
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||| ||||| | |||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||    
T  36511635 ataggctcgtagcacatcaatacaaatataaataatattgacgattaagagagtgacgattagtcaattacatacaaaatatatc 36511719  T

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Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 39958123 - 39958035
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || ||| |||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  39958123 ataggctcgtaacacatcgacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 39958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 24793415 - 24793502
Alignment:
Q  21 taggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| |||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||| ||| | ||||||||||||    
T  24793415 taggctcgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattagatacacaatatatcccaa 24793502  T

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Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 2586750 - 2586668
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatata 102  Q
    ||||||||| |||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| | ||||||    
T  2586750 ataggctcgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacatacacaatata 2586668  T

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Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 258774 - 258858
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||| ||||||||| |||||| ||||||||| ||||| ||| |||||||||| |||| |||||||||||||||| | ||||||||    
T  258774 atagactcgtagcaaatcaacttaaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatc 258858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 43509600 - 43509668
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  43509600 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 43509668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 55900831 - 55900919
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| | ||| | | ||||| |||| ||||||||||||||||||||| | ||||||| ||||    
T  55900831 ataggctcgtagcacatcaacataaatataaattatactcacgattacgagaatgatgattagtcaattacatacacaatatataccaa 55900919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 14614910 - 14614829
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| ||||||       ||||||||||||||||||||| | ||||||||||    
T  14614910 ataggctcgtagcacatcaacataaatataaataatattgacgattaa-------atgattagtcaattacatatacagtatatcccaa 14614829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 17892683 - 17892601
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatata 102  Q
    ||||||| | |||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| | ||||||    
T  17892683 ataggcttgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagacaattacatacacaatata 17892601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 44521733 - 44521802
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||| || ||| |||||||||||| ||| ||||| |||||||||| |||||||||||||||||||||    
T  44521733 gctcgtaacacatctacataaatataaataacattgacgattaagagagtgatgattagtcaattacata 44521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 5835384 - 5835316
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||| || || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  5835384 ctcgtaacacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 5835316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 52573141 - 52573073
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  52573141 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 52573073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 5325178 - 5325249
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || || || |||||||||| ||||||||| |||||||||| |||| ||||||||||||||||    
T  5325178 aggctcgtaacacattaatataaatataaataatattgacgattaagagagtgatcattagtcaattacata 5325249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 14795966 - 14795895
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || || |||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  14795966 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacata 14795895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 22492895 - 22492962
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||||||||||| || |||| | |||  ||||||||||||||||||| |||||||||||    
T  22492895 ataaatataagtaatattgataataaagaaagtgacaattagtcaattacatatatgatatatcccaa 22492962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 36944083 - 36944016
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| | ||||||||||||    
T  36944083 ataaatataaataatattgacgattaagagattgattattagccaattacatacacaatatatcccaa 36944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 49470692 - 49470638
Alignment:
Q  39 acataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||    
T  49470692 acataaatataaataatattgacgattaagagagtgatgattaatcaattacata 49470638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 51859203 - 51859138
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattac 90  Q
    |||||| || |||||||||||||||| ||||||||| ||||||| |  ||||||||||||||||||    
T  51859203 ctcgtaccacatcaacataaatataaataatattgacgattaagtgggtgatgattagtcaattac 51859138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 41146559 - 41146491
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| |||||||||  ||||||||| || | ||||||||||||||||    
T  41146559 ctcgtagcacataaacataaatataaataatattgacaattaagagagtggtcattagtcaattacata 41146491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 28377449 - 28377385
Alignment:
Q  29 tagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||| || ||||||||||||| ||||||||   ||||||||| || ||||||||||||||||||    
T  28377449 tagcacattaacataaatataaataatattggcaattaagagagtggtgattagtcaattacata 28377385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 27982221 - 27982158
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||| |||||||||||||| || |||| |  ||| ||||||||||||||||||| |||||||    
T  27982221 ataaatgtaagtaatattgataataaagaaagcgataattagtcaattacatatatgatatatc 27982158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 46431647 - 46431690
Alignment:
Q  23 ggctcgtagcatatcaacataaatataagtaatattgatgatta 66  Q
    |||| |||||| |||||||||||||||| |||||||||||||||    
T  46431647 ggcttgtagcacatcaacataaatataaataatattgatgatta 46431690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 3402763 - 3402804
Alignment:
Q  52 taatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  3402763 taatattgatgattaagagagtggtcattagtcaattacata 3402804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 4400795 - 4400731
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||| |||||||||||||| || || | | |||  ||||||||||||||||||| ||||||||    
T  4400795 ataaatgtaagtaatattgataataaataaagtgacaattagtcaattacatatatgatatatcc 4400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 11891981 - 11891925
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatata 97  Q
    |||||| |||||||||||||| || |||| | |||  ||||||||||||||||||||    
T  11891981 ataaatgtaagtaatattgataataaagaaagtgacaattagtcaattacatatata 11891925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 39796656 - 39796737
Alignment:
Q  27 cgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  39796656 cgtatcatatcaacataaatataagtaatattgacgattaagagagtgatgattagtcaattacatatacaatatatcccaa 39796737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1795807 - 1795719
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  1795807 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacatatacaatatatcccaa 1795719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 26692052 - 26691964
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  26692052 ataggctcgtaccacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 26691964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 26716686 - 26716598
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  26716686 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 26716598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 26961784 - 26961696
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  26961784 ataggctcgtaccacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 26961696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 26986426 - 26986338
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  26986426 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 26986338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 27938572 - 27938484
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||| |||||||||||||||| | ||||||||||||    
T  27938572 ataggctcgtagcatatcaacataaatataaataatagtgacgattaagagagtgataattagtcaattacatacacaatatatcccaa 27938484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 3934492 - 3934576
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||| || ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  3934492 ataggctcgtagcacatgaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatc 3934576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 25750019 - 25749935
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  25750019 ataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacatacacaatatatc 25749935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 9728093 - 9728176
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatat 103  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || | |||||||    
T  9728093 ataggctcgtagaacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacgtacacaatatat 9728176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 21251895 - 21251813
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  21251895 aggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatc 21251813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1921196 - 1921108
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||  |||||||  | ||||||||||||    
T  1921196 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtatattacatgcaaaatatatcccaa 1921108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 7629459 - 7629371
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||  |||||||||| ||||||||||||||| ||||| | ||||||||||||    
T  7629459 ataggctcgtaacacatcaacataaatataaataatattggcgattaagagagtgatgattagtcaatgacatacacaatatatcccaa 7629371  T

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Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 30777093 - 30777181
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  30777093 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 30777181  T

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Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 41233730 - 41233642
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| |||||| |||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||  |||||| ||||    
T  41233730 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagcgtgatgattagtcaattacatatacgatatataccaa 41233642  T

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Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 42365806 - 42365894
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||| ||  | ||||||||||||    
T  42365806 ataggctcgtagcacatcaacataaatataaataatattgacgattaacagagtgatgattagtcaattagatgcacaatatatcccaa 42365894  T

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Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 14836744 - 14836657
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaat 109  Q
    |||||||||||| |||||||||||||||| ||||||||| | |||||||| ||| ||||||||||||||||| | |||||||| ||||    
T  14836744 aggctcgtagcacatcaacataaatataaataatattgacggttaagagagtgacgattagtcaattacatacaaaatatatctcaat 14836657  T

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Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 5612160 - 5612242
Alignment:
Q  24 gctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatccc 106  Q
    |||| ||||| |||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||    
T  5612160 gctcttagcacatcaacataaatatgaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatccc 5612242  T

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Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 3701498 - 3701413
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||||  ||||||||||||||||  |||||||| |||||||||| ||||||||||||||||||||  | |||||||||    
T  3701498 ataggctcgtagcgcatcaacataaatataaaaaatattgacgattaagagagtgatgattagtcaattacatgcacaatatatcc 3701413  T

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Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 30284283 - 30284352
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaatta 89  Q
    |||||||| ||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  30284283 ataggctcctagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaatta 30284352  T

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Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 43357465 - 43357551
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| |||  |||||||||||| ||||||||||||||    
T  43357465 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgat--gtcaattacatacataatatatcccaa 43357551  T

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Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 6242713 - 6242801
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||| ||| ||||| |||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||| ||||    
T  6242713 atagactcatagcacatcaacattaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatataccaa 6242801  T

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Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 39689890 - 39689976
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||||||||||||||| | ||||||| ||||    
T  39689890 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacatacacaatatataccaa 39689976  T

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Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 27085788 - 27085698
Alignment:
Q  19 aataggctcgtagcatatcaacataaata----taagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    ||||||||||||||| |||||||||||||    ||| |||||||||||||||||| | |||| |||||||||||||||| | |||||||||    
T  27085788 aataggctcgtagcacatcaacataaataattataaataatattgatgattaagaaagtgataattagtcaattacatacacaatatatcc 27085698  T

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Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 5985640 - 5985708
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  5985640 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 5985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 9654163 - 9654079
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||||| || |||||||||||||||||||||||||||| |  ||||||| | |||||||||||||||| |||| | ||||||||    
T  9654163 ataggcttgtggcatatcaacataaatataagtaatattaacaattaagaaaatgatgattagtcaattgcatacacaatatatc 9654079  T

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Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 18001661 - 18001749
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| |||||  |||||||||||||||| |||||||||  | ||||||| ||||||||| ||||||||||||  ||||||||||||    
T  18001661 ataggcttgtagcccatcaacataaatataaataatattgacaagtaagagagtgatgattaatcaattacatatccaatatatcccaa 18001749  T

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Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 10657400 - 10657333
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  10657400 tcgtagcacatgaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 10657333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 30919103 - 30919032
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  30919103 aggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 30919032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 34032781 - 34032697
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| ||||| ||||||||||    |||||| |||||||||| ||||||||| ||||||||||| | ||||||||||||    
T  34032781 ataggctcgtagcacatcaatataaatataa----tattgacgattaagagagtgatgattaatcaattacatacacaatatatcccaa 34032697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 35746099 - 35746162
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagt 83  Q
    |||||||||||||| |||||||||||||||| |||||||||  ||||||||| |||||||||||    
T  35746099 ataggctcgtagcacatcaacataaatataaataatattgacaattaagagagtgatgattagt 35746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 17137945 - 17138026
Alignment:
Q  26 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||| |||||||||| ||||| ||||||||| |||||||||| |||||||||||||| || ||| | ||||||||||||    
T  17137945 tcgtagcacatcaacataa-tataaataatattgacgattaagagagtgatgattagtcaaatatatacacaatatatcccaa 17138026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 22738266 - 22738175
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatga---ttagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||| | |||||||||| ||||||   ||||||| ||||||| | ||||||||||||    
T  22738266 ataggctcgtaacacatcaacataaatataaataatattaacgattaagagagtgatgatatttagtcagttacatacacaatatatcccaa 22738175  T

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Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 26794161 - 26794232
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| |||||||||  ||||||||| || | ||||||||||||||||    
T  26794161 aggctcgtagcacattaacataaatataaataatattgacaattaagagagtgctcattagtcaattacata 26794232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 11694527 - 11694466
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgatta 81  Q
    |||||||||||||| |||||||||| ||||| ||||||| | |||||||||| |||||||||    
T  11694527 ataggctcgtagcacatcaacataagtataaataatattcacgattaagagagtgatgatta 11694466  T

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Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 1638952 - 1639021
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||||| |||||||||  || | ||||||||||||||||    
T  1638952 aggctcgtagcacattaacataaatataaataatattgacgattaagag--tggtcattagtcaattacata 1639021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 11907719 - 11907638
Alignment:
Q  21 taggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||| |||||||||||||      ||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  11907719 taggctcgtagcacatcaacataaata------atattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 11907638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 15066594 - 15066538
Alignment:
Q  52 taatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||| |||||||||| | ||||||||||||||||||| | ||||||||||||    
T  15066594 taatattgacgattaagagagtaatgattagtcaattacatacacaatatatcccaa 15066538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 5722395 - 5722324
Alignment:
Q  37 caacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| | ||| ||| |||||||||| |||||||||||| |||||||| | ||||||| ||||    
T  5722395 caacataaatataaattatactgacgattaagagaatgatgattagtcgattacatacacaatatataccaa 5722324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 12190707 - 12190645
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatat 103  Q
    ||||||||||||||||||||| || |||| |  ||  ||||||||||||||||||| ||||||    
T  12190707 ataaatataagtaatattgataataaagaaagcgacaattagtcaattacatatatgatatat 12190645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 10154358 - 10154313
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaa 86  Q
    |||||||||||||||||||||||| |||| | |||| |||||||||    
T  10154358 ataaatataagtaatattgatgataaagaaagtgataattagtcaa 10154313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 21317468 - 21317404
Alignment:
Q  41 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||| |||||||||||| || || | | |||  ||||||||||||||||||| ||||||||    
T  21317468 ataaatatgagtaatattgataataaataaagtgacaattagtcaattacatatattatatatcc 21317404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 13061058 - 13061146
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  13061058 ataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatcccaa 13061146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 13045065 - 13045150
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||| | |||||||||    
T  13045065 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagccaattacatacacaatatatcc 13045150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 6707723 - 6707811
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||| | |||| |||||||    
T  6707723 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatacatcccaa 6707811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 27084387 - 27084299
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| |||||||||  ||||||||| ||||| ||||||||||||||| | ||||||||||||    
T  27084387 ataggctcgtagcacatcaacataaatataaataatattgacaattaagagagtgatggttagtcaattacatacacaatatatcccaa 27084299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 32018531 - 32018443
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  32018531 ataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 32018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 11105721 - 11105634
Alignment:
Q  21 taggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||||| || | ||||| |||||||||| ||||||||||||||    
T  11105721 taggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggttattagccaattacatacataatatatcccaa 11105634  T

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Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 3213004 - 3212916
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| | ||||||| ||||    
T  3213004 ataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacatacacaatatataccaa 3212916  T

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Target: chr6; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 234728 - 234645
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatat 103  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||| | |||||||    
T  234728 atagactcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaactacatacacaatatat 234645  T

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Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 19128567 - 19128482
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 105  Q
    ||||||||||| || |||||||||||||||| |||| |||| |||||||||| ||| ||||||||||||||||| | |||||||||    
T  19128567 ataggctcgtaacacatcaacataaatataaataatgttgacgattaagagagtgacgattagtcaattacatacacaatatatcc 19128482  T

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Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 7255353 - 7255282
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattaca 91  Q
    |||| ||||||||| |||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  7255353 atagactcgtagcacatcaacattaatataaataatattgacgattaagagagtgatgattagtcaattaca 7255282  T

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Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 10894201 - 10894286
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataag-taatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    ||||||||| |||| |||| |||||||||||  ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  10894201 ataggctcgaagcacatcagcataaatataaaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatc 10894286  T

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Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 3299472 - 3299384
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||| || |||||||| ||||||| ||| ||| | |||||||||| | ||||||||||||||||||| | ||||||||||||    
T  3299472 ataggctcgtaccacatcaacatgaatataaataacattaacgattaagagagtaatgattagtcaattacatacacaatatatcccaa 3299384  T

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Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 26327730 - 26327646
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 104  Q
    |||||||||||||| |||||||| ||||||| ||||  ||| |||||||||| ||||||||||||| ||||||| | ||||||||    
T  26327730 ataggctcgtagcacatcaacattaatataaataattatgacgattaagagagtgatgattagtcagttacatagacaatatatc 26327646  T

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Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 32130222 - 32130290
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  32130222 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 32130290  T

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Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 13607497 - 13607552
Alignment:
Q  53 aatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  13607497 aatattgatgattaagagagtgatgattagtcaattacatacacaatatatcccaa 13607552  T

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Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 7187938 - 7188024
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||| || || |||||||||| ||||||||| |||||||||| |||| |||||| ||||||||| | ||||||| ||||    
T  7187938 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtgatcattagttaattacatacacaatatataccaa 7188024  T

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Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 8357835 - 8357767
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  8357835 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacata 8357767  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 4153245 - 4153315
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattac 90  Q
    |||||||| ||||| |||||||||||||||| ||||||| | |||||||||| ||||||| | ||||||||    
T  4153245 ataggctcatagcacatcaacataaatataaataatattaacgattaagagagtgatgatcactcaattac 4153315  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 22988838 - 22988878
Alignment:
Q  46 tataagtaatattgatgattaagagactgatgattagtcaa 86  Q
    ||||||||||||||| ||||||| || ||||||||||||||    
T  22988838 tataagtaatattgacgattaagcgagtgatgattagtcaa 22988878  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 23799558 - 23799518
Alignment:
Q  46 tataagtaatattgatgattaagagactgatgattagtcaa 86  Q
    ||||||||||||||| ||||||| || ||||||||||||||    
T  23799558 tataagtaatattgacgattaagcgagtgatgattagtcaa 23799518  T

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Target: scaffold0250 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 6083 - 6015
Alignment:
Q  25 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||| ||||| ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  6083 ctcgtatcatattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 6015  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 202466 - 202547
Alignment:
Q  20 ataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 108  Q
    |||||||||||||| |||||||||||||||| ||||||||| ||||||       ||||||||||||||||||||| | ||||||||||    
T  202466 ataggctcgtagcacatcaacataaatataaataatattgacgattaa-------atgattagtcaattacatatacagtatatcccaa 202547  T

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Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 43765 - 43836
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || || |||||||||| ||||||||| |||||||||| || | ||||||||||||||||    
T  43765 aggctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaattacata 43836  T

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Target: scaffold0060 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 29804 - 29875
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    |||||||||||| || ||||||||||||| ||||||| | |||||||||| || | ||||||||||||||||    
T  29804 aggctcgtagcacattaacataaatataaataatattaacgattaagagagtggtcattagtcaattacata 29875  T

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Target: scaffold0285 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 13810 - 13729
Alignment:
Q  22 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatat 103  Q
    |||||| ||||| || ||||| ||||||| ||||  ||| |||||||||| ||||||||||||||| ||||| | |||||||    
T  13810 aggctcatagcacataaacattaatataaataattatgacgattaagagagtgatgattagtcaatgacatacacaatatat 13729  T

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Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 41276 - 41329
Alignment:
Q  40 cataaatataagtaatattgatgattaagagactgatgattagtcaattacata 93  Q
    ||||||||||| ||||||| | |||||||||| || | ||||||||||||||||    
T  41276 cataaatataaataatattaacgattaagagagtggtcattagtcaattacata 41329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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