View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9991_low_22 (Length: 251)
Name: NF9991_low_22
Description: NF9991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9991_low_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 42748095 - 42748334
Alignment:
| Q |
12 |
catagggaaatggatattaaaagtactcatggcaagtattttaagcaagtgacaactttggtttaacttgaaaatcactctcacaagcctcaaataccgt |
111 |
Q |
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| T |
42748095 |
catagggaaatggatattaaaagtactcatagcaagtattttaagcaagtgacaactttggtttaacttgaaaatcactctcacaagcctcaaataccgt |
42748194 |
T |
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| Q |
112 |
agcattgatgacataacatgtgaattttataactagtgggctggtacctttctattgcaagtaactaaggactaagcctcttagaaagctccaactatta |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42748195 |
agcattgatgacataacatgtgaattttataactagtgggctggtacctttctattgcaagtaactaaggactaagcctcttagaaagctccaactatta |
42748294 |
T |
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| Q |
212 |
aaattgtttaatttgaatgtactatatagaagctccaaca |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
42748295 |
aaattgtttaatttgaatgtactatatagaagctccaaca |
42748334 |
T |
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