View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9991_low_8 (Length: 430)
Name: NF9991_low_8
Description: NF9991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9991_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 7 - 416
Target Start/End: Complemental strand, 38683332 - 38682923
Alignment:
| Q |
7 |
tttggtgttgttgtagtagctggcgagctgtatgtattgacacatttatatgatgatgatttcacagaaagtcgaaggtccagatcctataagaagacag |
106 |
Q |
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| T |
38683332 |
tttggtgttgttgtagtagctggcgagctgtatgtattgacacatttatatgatgatgatttcacagaaagtcgaaggtccagatcctataagaagacag |
38683233 |
T |
|
| Q |
107 |
gaacaatgtgctttcaaatctataatccgaaaaggaaggcatggagaacaatggtcacaaaatcgcctttcactcgccgtgtagatattactagtgctgt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38683232 |
gaacaatgtgctttcaaatctataatccgaaaaggaaggcatggagaacaatggtcacaaaatcgcctttcactcgccgtgtagatattactagtgctgt |
38683133 |
T |
|
| Q |
207 |
attgagcacaattggtctgtgaattgtggtacatcttatttttatagtttaggcatctctgccaaattcattgtgcagcacttcatttgaccaccgggtt |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38683132 |
attgagcacaattggtctgtgaattgtggtacatcttatttttatagtttaggcatctctgccaaattcattgtgcagcacttcatttgaccaccgggtt |
38683033 |
T |
|
| Q |
307 |
ccatgtaggtggcttatatttgtatatttctgtgtttagtacatctcttgacttgatcaggatatatagttcattttgtattagctgataccgtataaat |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38683032 |
ccatgtaggtggcttatatttgtatatttctgtgtttagtacatctcttgacttgatcaggatatatagttcattttgtattagctgataccgtataaat |
38682933 |
T |
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| Q |
407 |
atgcatattg |
416 |
Q |
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|||||||||| |
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| T |
38682932 |
atgcatattg |
38682923 |
T |
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