View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9993_high_17 (Length: 250)

Name: NF9993_high_17
Description: NF9993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9993_high_17
NF9993_high_17
[»] chr3 (3 HSPs)
chr3 (11-250)||(8341833-8342072)
chr3 (27-133)||(8333037-8333143)
chr3 (75-250)||(26727429-26727604)
[»] chr1 (6 HSPs)
chr1 (12-246)||(44144755-44144990)
chr1 (75-242)||(44785757-44785924)
chr1 (121-250)||(44611657-44611786)
chr1 (75-247)||(35898952-35899124)
chr1 (12-200)||(11544676-11544868)
chr1 (12-126)||(44612085-44612199)
[»] scaffold0061 (1 HSPs)
scaffold0061 (27-250)||(29813-30036)
[»] scaffold0017 (2 HSPs)
scaffold0017 (27-250)||(168756-168979)
scaffold0017 (12-250)||(173765-174003)
[»] chr2 (2 HSPs)
chr2 (27-246)||(29228546-29228765)
chr2 (27-246)||(29341845-29342064)
[»] chr5 (9 HSPs)
chr5 (30-112)||(29508115-29508197)
chr5 (27-115)||(29507536-29507624)
chr5 (30-115)||(29507611-29507696)
chr5 (30-115)||(29507683-29507768)
chr5 (77-115)||(29507874-29507912)
chr5 (77-115)||(29507946-29507984)
chr5 (77-115)||(29508090-29508128)
chr5 (30-115)||(29507755-29507840)
chr5 (30-115)||(29507971-29508056)


Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 8342072 - 8341833
Alignment:
Q  11 cagagattgcaataacgaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattccca 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8342072 cagagattgcaataacgaaagatttccgagttggaaagggattgtaccaacaagatcattaagactgagattaaggtgttgcaattgtgagagattccca 8341973  T
Q  111 agttgagtaggaatcttcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtat 210  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8341972 agttgagtaggaatctttccctcataaccaccgtttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtat 8341873  T
Q  211 tcaaataactgaggtctagatatgttagatgttgcaactc 250  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  8341872 tcaaataactgaggtcaagatatgttagatgttacaactc 8341833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 8333143 - 8333037
Alignment:
Q  27 gaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatct 126  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8333143 gaaagattttcgagttggaaagggatttttccaacaagatcattaagtctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatct 8333044  T
Q  127 tcccctc 133  Q
    | |||||    
T  8333043 ttccctc 8333037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 26727604 - 26727429
Alignment:
Q  75 ctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatcttcccctcataaccaccatttgagagatcaaggtatcgtaagttgctga 174  Q
    ||||||| |||||||||||| |||||||| || |||||||||| |||||||||| | | | ||    |||||||||||| |||||||||||| ||| |||    
T  26727604 ctgagatcaaggtgttgcaactgtgagagttttccaagttgagaaggaatcttctcattaaaaaaggcatttgagagattaaggtatcgtaaattgatga 26727505  T
Q  175 acgatccaataaattttggaatttgaccactagtattcaaataactgaggtctagatatgttagatgttgcaactc 250  Q
    | || |||||||| ||||| || ||||| ||| |  ||||  |||| |||||||||||||||||||||||||||||    
T  26727504 aggagccaataaaatttgggatatgacctctaatcatcaatgaactaaggtctagatatgttagatgttgcaactc 26727429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 44144990 - 44144755
Alignment:
Q  12 agagattgcaataacgaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaa 111  Q
    ||||| |||||||| |||||||||||||||||||||||||||  |||||  || |||||  | || | || ||||||| ||||| |||||||||||||||    
T  44144990 agagactgcaataatgaaagatttccgagttggaaagggatttctccaatgagttcattgtagctaaaatcaaggtgtcgcaatcgtgagagattcccaa 44144891  T
Q  112 gttgagtaggaatcttcccctcataaccaccatttgagagatcaa-ggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtat 210  Q
    |||||| |||||||||||| ||||||||||||  ||||||||||| ||| |||||| |||||||| || |||||||||||||| |||||||||| |||||    
T  44144890 gttgagcaggaatcttcccatcataaccaccaactgagagatcaaaggtgtcgtaacttgctgaaggagccaataaattttgggatttgaccaccagtat 44144791  T
Q  211 tcaaataactgaggtctagatatgttagatgttgca 246  Q
    |||||||||| |||||||||| ||||||||||||||    
T  44144790 tcaaataacttaggtctagatgtgttagatgttgca 44144755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 44785757 - 44785924
Alignment:
Q  75 ctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatcttcccctcataaccaccatttgagagatcaaggtatcgtaagttgctga 174  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||  | |||||||||  |||||| ||||||||||||||||||||||    
T  44785757 ctgagatcaaggtgtcgcaattgtgagagattcccaagttgagtaggaatctttccaccgtaaccaccaactgagaggtcaaggtatcgtaagttgctga 44785856  T
Q  175 acgatccaataaattttggaatttgaccactagtattcaaataactgaggtctagatatgttagatgt 242  Q
    | |||||||||||||||||||||||| || ||||| |||||| |||||||||||||||| ||||||||    
T  44785857 aggatccaataaattttggaatttgatcattagtaatcaaatgactgaggtctagatattttagatgt 44785924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 121 - 250
Target Start/End: Complemental strand, 44611786 - 44611657
Alignment:
Q  121 gaatcttcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtattcaaataact 220  Q
    |||||||||| ||| |||||| |||||||||||||||||||| |||||||| ||| || |||||||||||||| ||||||||||||||||||| ||||||    
T  44611786 gaatcttcccatcaaaaccactatttgagagatcaaggtatcttaagttgcagaaggagccaataaattttgggatttgaccactagtattcagataact 44611687  T
Q  221 gaggtctagatatgttagatgttgcaactc 250  Q
    ||||| ||||||||||||||||||||||||    
T  44611686 gaggtttagatatgttagatgttgcaactc 44611657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 247
Target Start/End: Complemental strand, 35899124 - 35898952
Alignment:
Q  75 ctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatcttcccctcataaccaccatttgagagatcaaggtatcgtaagttgctga 174  Q
    ||||||| ||||| ||||||   ||||||||||| ||| |||| |||||||||||| ||  |||||| |||||||||||||| |||||| ||||||||||    
T  35899124 ctgagatcaaggtattgcaacaatgagagattcctaagctgagcaggaatcttcccatcgaaaccactatttgagagatcaatgtatcgcaagttgctga 35899025  T
Q  175 acgatccaataaattttggaatttgaccactagtattcaaataactgaggtctagatatgttagatgttgcaa 247  Q
    | || |||||||||||||| ||||||||||||||||||||| |||  ||||||| |||||| |||||||||||    
T  35899024 aggagccaataaattttgggatttgaccactagtattcaaaaaaccaaggtctaaatatgtaagatgttgcaa 35898952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 11544676 - 11544868
Alignment:
Q  12 agagattgcaataacgaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaa 111  Q
    ||||| ||||| || ||||||||||||||||||||||| |||  |||||  || |||||  | || |||| |||||||  ||| ||||||||||| ||||    
T  11544676 agagactgcaacaatgaaagatttccgagttggaaaggaatttctccaatgagttcattgtagctaagatcaaggtgtctcaactgtgagagattgccaa 11544775  T
Q  112 gttgagtag----gaatcttcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttga 200  Q
    |||||| ||    |||||||| | | ||||  || ||||||||||| |||||||| ||| ||| | || || |||||||||||||| ||||||    
T  11544776 gttgagaaggaatgaatcttcgcatgataataactatttgagagattaaggtatcataacttggttaaggagccaataaattttgggatttga 11544868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 44612199 - 44612085
Alignment:
Q  12 agagattgcaataacgaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaa 111  Q
    ||||| ||||| || ||||||||||| |||||||||||||||  ||||   || |||||    || |||| ||||||| |||||||||||||||||||||    
T  44612199 agagactgcaacaatgaaagatttccaagttggaaagggatttctccagtgagttcattgtcacttagatcaaggtgtcgcaattgtgagagattcccaa 44612100  T
Q  112 gttgagtaggaatct 126  Q
    |||||| ||||||||    
T  44612099 gttgagaaggaatct 44612085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 29813 - 30036
Alignment:
Q  27 gaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatct 126  Q
    |||||||||||||||||||||||||||  ||||   ||||||||    || |||| ||| ||| |||||||||| ||||||||||||||| |||||||||    
T  29813 gaaagatttccgagttggaaagggatttctccattcagatcattcctgctaagatcaagatgtcgcaattgtgatagattcccaagttgaataggaatct 29912  T
Q  127 tcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtattcaaataactgaggtc 226  Q
    |||| ||||||||||||  |||||||||||||||| |||| |||||||  ||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  29913 tcccatcataaccaccaaatgagagatcaaggtattgtaatttgctgatggatccaataaattttgggatttgaccactggtattcaaatatctgaggtc 30012  T
Q  227 tagatatgttagatgttgcaactc 250  Q
     |||||| ||||||||||||||||    
T  30013 aagatattttagatgttgcaactc 30036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 168979 - 168756
Alignment:
Q  27 gaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatct 126  Q
    |||||||||||||||||||||||||||  ||||   ||||||||    || |||| ||| ||| |||||||||| ||||||||||||||| |||||||||    
T  168979 gaaagatttccgagttggaaagggatttctccattcagatcattcctgctaagatcaagatgtcgcaattgtgatagattcccaagttgaataggaatct 168880  T
Q  127 tcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtattcaaataactgaggtc 226  Q
    |||| ||||||||||||  |||||||||||||||| |||| |||||||  ||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  168879 tcccatcataaccaccaaatgagagatcaaggtattgtaatttgctgatggatccaataaattttgggatttgaccactggtattcaaatatctgaggtc 168780  T
Q  227 tagatatgttagatgttgcaactc 250  Q
     |||||| ||||||||||||||||    
T  168779 aagatattttagatgttgcaactc 168756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 174003 - 173765
Alignment:
Q  12 agagattgcaataacgaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaa 111  Q
    ||||| ||||| || |||||||||||||||||||||||||||  |||||  || |||||  | || |||| ||||| |  ||||||||| ||||| ||||    
T  174003 agagactgcaacaatgaaagatttccgagttggaaagggatttctccaatgagttcattgtagctaagatcaaggtatcacaattgtgatagatttccaa 173904  T
Q  112 gttgagtaggaatcttcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtatt 211  Q
    ||| |  ||||| |||||| ||||||  ||||||||| ||||||||||  || || |||||||| || |||||||||||||  ||||||| |||||||||    
T  173903 gttcaaaaggaaccttcccatcataatgaccatttgacagatcaaggtgccgcaacttgctgaaggagccaataaattttgagatttgactactagtatt 173804  T
Q  212 caaataactgaggtctagatatgttagatgttgcaactc 250  Q
    ||||||||||||||||| ||||||||||| ||| |||||    
T  173803 caaataactgaggtctaaatatgttagattttgtaactc 173765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 29228546 - 29228765
Alignment:
Q  27 gaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatct 126  Q
    |||||||||||||||||||||||||||| |||||  || |||||    || |||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  29228546 gaaagatttccgagttggaaagggattgctccaatgagttcattgttgctaagatcaaggtgttgcaattgtgagagatttccaagttgagaaggaatct 29228645  T
Q  127 tcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtattcaaataactgaggtc 226  Q
    |||| ||||||  |||  |||||||||  |||||| |||| |||||||| || |||||||||||||| |||||||||||||||| |||||||||||||||    
T  29228646 tcccatcataatgacctgttgagagattgaggtattgtaacttgctgaaggagccaataaattttgggatttgaccactagtatgcaaataactgaggtc 29228745  T
Q  227 tagatatgttagatgttgca 246  Q
    ||||||| ||||||||||||    
T  29228746 tagatattttagatgttgca 29228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 29341845 - 29342064
Alignment:
Q  27 gaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttgagtaggaatct 126  Q
    |||||||||||||||||||||||||||| |||||  || |||||    || |||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  29341845 gaaagatttccgagttggaaagggattgctccaatgagttcattgttgctaagatcaaggtgttgcaattgtgagagatttccaagttgagaaggaatct 29341944  T
Q  127 tcccctcataaccaccatttgagagatcaaggtatcgtaagttgctgaacgatccaataaattttggaatttgaccactagtattcaaataactgaggtc 226  Q
    |||| ||||||  |||  |||||||||  |||||| |||| |||||||| || |||||||||||||| |||||||||||||||| |||||||||||||||    
T  29341945 tcccatcataatgacctgttgagagattgaggtattgtaacttgctgaaggagccaataaattttgggatttgaccactagtatgcaaataactgaggtc 29342044  T
Q  227 tagatatgttagatgttgca 246  Q
    ||||||| ||||||||||||    
T  29342045 tagatattttagatgttgca 29342064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 29508115 - 29508197
Alignment:
Q  30 agatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaag 112  Q
    |||||||| |||||||| || |||| |||||  || ||||||  |||||||| |||||||||||||||||||||||| |||||    
T  29508115 agatttccaagttggaagggaattgctccaatgagttcattacctctgagatcaaggtgttgcaattgtgagagatttccaag 29508197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 29507536 - 29507624
Alignment:
Q  27 gaaagatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    |||||||||  |||||| |||||||||| |||||  || |||||  | ||||||| ||||||||| |||||||||||||| ||||||||    
T  29507536 gaaagattttggagttgtaaagggattgctccaattagttcattgtagctgagatcaaggtgttgtaattgtgagagatttccaagttg 29507624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 29507611 - 29507696
Alignment:
Q  30 agatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    |||||||| |||||||| || |||| |||||  || |||||    ||||||| |||||||||||||||||||||||| ||||||||    
T  29507611 agatttccaagttggaagggaattgctccaatgagttcattttcgctgagatcaaggtgttgcaattgtgagagatttccaagttg 29507696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 29507683 - 29507768
Alignment:
Q  30 agatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    |||||||| |||||||| || |||| |||||  || |||||    ||||||| |||||||||||||||||||||||| ||||||||    
T  29507683 agatttccaagttggaagggaattgctccaatgagttcatttctgctgagatcaaggtgttgcaattgtgagagatttccaagttg 29507768  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 29507874 - 29507912
Alignment:
Q  77 gagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  29507874 gagatcaaggtgttgcaattgtgagagatttccaagttg 29507912  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 29507946 - 29507984
Alignment:
Q  77 gagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  29507946 gagatcaaggtgttgcaattgtgagagatttccaagttg 29507984  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 29508090 - 29508128
Alignment:
Q  77 gagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  29508090 gagatcaaggtgttgcaattgtgagagatttccaagttg 29508128  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 29507755 - 29507840
Alignment:
Q  30 agatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    |||||||| |||||||| || |||  |||||  || |||||  | ||||||| ||| |||||||||||||||||||| ||||||||    
T  29507755 agatttccaagttggaagggaattcctccaatgagttcattgtagctgagatcaagatgttgcaattgtgagagatttccaagttg 29507840  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 29507971 - 29508056
Alignment:
Q  30 agatttccgagttggaaagggattgttccaacaagatcattaaatctgagattaaggtgttgcaattgtgagagattcccaagttg 115  Q
    |||||||| |||||||| || |||  |||||  || |||||  | ||||||| ||| |||||||||||||||||||| ||||||||    
T  29507971 agatttccaagttggaagggaattcctccaatgagttcattgtagctgagatcaagatgttgcaattgtgagagatttccaagttg 29508056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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