View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9993_high_18 (Length: 250)

Name: NF9993_high_18
Description: NF9993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9993_high_18
NF9993_high_18
[»] chr4 (13 HSPs)
chr4 (11-250)||(2796390-2796629)
chr4 (43-92)||(51383996-51384045)
chr4 (42-86)||(20119953-20119997)
chr4 (50-86)||(32369927-32369963)
chr4 (47-86)||(31277036-31277075)
chr4 (43-86)||(36768857-36768900)
chr4 (43-102)||(47040239-47040298)
chr4 (44-86)||(843150-843192)
chr4 (43-93)||(19262932-19262982)
chr4 (41-82)||(1386537-1386578)
chr4 (46-86)||(8457933-8457973)
chr4 (41-93)||(18783978-18784030)
chr4 (49-93)||(35212741-35212785)
[»] chr6 (10 HSPs)
chr6 (42-91)||(6284668-6284717)
chr6 (42-111)||(34625717-34625786)
chr6 (43-81)||(32577472-32577510)
chr6 (41-86)||(6294542-6294587)
chr6 (42-82)||(4012732-4012772)
chr6 (44-80)||(4945274-4945310)
chr6 (42-86)||(34598546-34598590)
chr6 (41-84)||(6074523-6074566)
chr6 (43-105)||(18262791-18262854)
chr6 (41-85)||(7564170-7564214)
[»] chr1 (8 HSPs)
chr1 (41-86)||(3451863-3451908)
chr1 (43-103)||(2445861-2445921)
chr1 (43-86)||(26462653-26462696)
chr1 (43-85)||(3148159-3148201)
chr1 (46-87)||(9656775-9656816)
chr1 (43-84)||(29127664-29127705)
chr1 (48-84)||(1118409-1118445)
chr1 (43-87)||(36251257-36251301)
[»] chr5 (8 HSPs)
chr5 (41-84)||(28322251-28322294)
chr5 (43-103)||(9878040-9878100)
chr5 (41-93)||(9895148-9895200)
chr5 (41-76)||(40141299-40141334)
chr5 (43-93)||(16274348-16274397)
chr5 (41-86)||(15086706-15086751)
chr5 (41-86)||(39828474-39828519)
chr5 (43-103)||(32444757-32444817)
[»] chr3 (9 HSPs)
chr3 (46-86)||(49636837-49636877)
chr3 (43-86)||(18268013-18268056)
chr3 (43-83)||(19323456-19323496)
chr3 (43-86)||(47542543-47542586)
chr3 (41-87)||(19730215-19730261)
chr3 (41-87)||(19750805-19750851)
chr3 (68-101)||(9791348-9791381)
chr3 (43-84)||(13725318-13725359)
chr3 (56-84)||(20980954-20980982)
[»] chr7 (11 HSPs)
chr7 (43-96)||(17285062-17285115)
chr7 (43-91)||(26993567-26993615)
chr7 (48-84)||(40826525-40826561)
chr7 (60-103)||(30177029-30177072)
chr7 (43-86)||(46179918-46179961)
chr7 (43-93)||(24401830-24401880)
chr7 (41-83)||(31837762-31837804)
chr7 (43-84)||(27012134-27012175)
chr7 (43-87)||(20204246-20204290)
chr7 (46-86)||(40688891-40688931)
chr7 (42-86)||(44172897-44172941)
[»] chr8 (11 HSPs)
chr8 (57-105)||(10170408-10170456)
chr8 (43-86)||(3066050-3066093)
chr8 (43-86)||(29096954-29096997)
chr8 (47-86)||(31551847-31551886)
chr8 (47-105)||(32145226-32145284)
chr8 (42-84)||(43806203-43806245)
chr8 (47-96)||(1979410-1979459)
chr8 (57-86)||(2517115-2517144)
chr8 (54-83)||(12969205-12969234)
chr8 (41-86)||(13342605-13342650)
chr8 (57-86)||(25799156-25799185)
[»] chr2 (11 HSPs)
chr2 (44-84)||(35198240-35198280)
chr2 (43-95)||(42205843-42205895)
chr2 (43-86)||(28341332-28341375)
chr2 (203-250)||(29263903-29263949)
chr2 (42-84)||(14667666-14667708)
chr2 (47-85)||(17427321-17427359)
chr2 (58-103)||(14268756-14268801)
chr2 (47-84)||(32102872-32102909)
chr2 (43-95)||(16630794-16630846)
chr2 (42-82)||(38738423-38738463)
chr2 (46-102)||(42043208-42043264)


Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 2796629 - 2796390
Alignment:
Q  11 caaaggcgggtcccggtgtccgaatcaaatcaacacatgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtcaatttcat 110  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2796629 caaaggcgtgtcccggtgtccgaatcaaattaacacatgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtcaatgtcat 2796530  T
Q  111 ggtcgggtccattttgaggcttcatatttgaataaaccaaataataacaccaacatttgtttagttaacataataataaaataataagagtgtgataaat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2796529 ggtcgggtccattttgaggcttcatatttgaataaaccaaataataacaccaacatttgtttagttaacataataataaaataataagagtgtgataaat 2796430  T
Q  211 taaagattgagatgcttaccaaatcagccctcctctcctc 250  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2796429 taaagattgagatgcttaccaaatcagccctcctctcctc 2796390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 51383996 - 51384045
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtg 92  Q
    ||||||||||||| ||||||||| ||||||||| |||||| |||||||||    
T  51383996 acacatgtgattacattcaattatttcattttcacaaattgttaatggtg 51384045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 20119997 - 20119953
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||    
T  20119997 aacacatgtgattacattaaattatttcattttctcaaattatta 20119953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 32369927 - 32369963
Alignment:
Q  50 tgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32369927 tgattacattcaattaattcattttctcaaattatta 32369963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 31277036 - 31277075
Alignment:
Q  47 atgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  31277036 atgtgattacattcaattagttcattttctcaaattatta 31277075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 36768857 - 36768900
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||    
T  36768857 acacatgtgattacattcaattaattaattctctcaaattatta 36768900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 47040239 - 47040298
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtc 102  Q
    ||||||||||||| || || |||||||||||||||||||||| | |||||| || |||||    
T  47040239 acacatgtgattatatccagttaattcattttctcaaattatcattggtgtcgacgtgtc 47040298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 843150 - 843192
Alignment:
Q  44 cacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||  ||||| |||||||||||||||||||||||    
T  843150 cacatgtgattacgttcaaataattcattttctcaaattatta 843192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 19262932 - 19262982
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgt 93  Q
    ||||||||||||| |||||||||  |||| |||||||||||||| ||||||    
T  19262932 acacatgtgattacattcaattatgtcatcttctcaaattattactggtgt 19262982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 1386537 - 1386578
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaatt 82  Q
    ||||||||||||||| ||||||||||||  ||||||||||||    
T  1386537 caacacatgtgattatattcaattaattacttttctcaaatt 1386578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 8457973 - 8457933
Alignment:
Q  46 catgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||| |||||||||  |||||||||||||||||||    
T  8457973 catgtgattacattcaattatgtcattttctcaaattatta 8457933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 18784030 - 18783978
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattattaatggtgt 93  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||| ||| ||||    
T  18784030 caacacgtgtaattacattcaattacttcattttctcaaattatgaattgtgt 18783978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 35212741 - 35212785
Alignment:
Q  49 gtgattaaattcaattaattcattttctcaaattattaatggtgt 93  Q
    ||||||| ||||||||| || ||||||||||||||||| ||||||    
T  35212741 gtgattacattcaattatttaattttctcaaattattattggtgt 35212785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 6284668 - 6284717
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaattattaatggt 91  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6284668 aacacatgtgattaaattcaattatgtcattttctcaaattattaatggt 6284717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 34625786 - 34625717
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtcaatttcatg 111  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||  ||||| || || |||||||||||    
T  34625786 aacatatgtgattacattcaattaattcattttctcaaattattatcggtgtcgatgtatcaatttcatg 34625717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 32577472 - 32577510
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaat 81  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  32577472 acacatgtgattacattcaattaattcattttctcaaat 32577510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 6294542 - 6294587
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||    
T  6294542 caacacatgcgattgcattcaattaattcattttctcaaattatta 6294587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 4012772 - 4012732
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaatt 82  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  4012772 aacacatgtgattatattcaattaattcattttttcaaatt 4012732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 4945310 - 4945274
Alignment:
Q  44 cacatgtgattaaattcaattaattcattttctcaaa 80  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4945310 cacatgtgattacattcaattaattcattttctcaaa 4945274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 34598590 - 34598546
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||| ||||||||| || |||||||||||||||||||||||||||    
T  34598590 aacatatgtgattacatccaattaattcattttctcaaattatta 34598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 6074566 - 6074523
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||||||||||||||  ||||| |||||||||||||||||||||    
T  6074566 caacacatgtgattacgttcaactaattcattttctcaaattat 6074523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 18262791 - 18262854
Alignment:
Q  43 acacatgtgattaaattcaattaattc-attttctcaaattattaatggtgttgaagtgtcaat 105  Q
    |||||||||||||  |||||||||||| ||||| ||||||||||| |||||||||  |||||||    
T  18262791 acacatgtgattactttcaattaattcaattttatcaaattattattggtgttgatatgtcaat 18262854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 7564170 - 7564214
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattatt 85  Q
    |||||| | |||||| |||||||||||| ||||||||||||||||    
T  7564170 caacacgtatgattacattcaattaatttattttctcaaattatt 7564214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 3451908 - 3451863
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  3451908 caacacatgtgattaaattcaattaattcgttttctcaaattatta 3451863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 2445921 - 2445861
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtca 103  Q
    |||||| |||||||||| |||||  ||||||||||||||||| | ||||||||||||||||    
T  2445921 acacatatgattaaattgaattatgtcattttctcaaattatcattggtgttgaagtgtca 2445861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 26462653 - 26462696
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||    
T  26462653 acacatgtgattacattcaattatttcattttcttaaattatta 26462696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 3148201 - 3148159
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatt 85  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||    
T  3148201 acacatgtgattatattaaattaatttattttctcaaattatt 3148159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 9656775 - 9656816
Alignment:
Q  46 catgtgattaaattcaattaattcattttctcaaattattaa 87  Q
    |||||||||| |||||||||| ||||||| ||||||||||||    
T  9656775 catgtgattacattcaattaaatcattttttcaaattattaa 9656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 29127705 - 29127664
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||||| |||||| |||||||||| |||||||||||||||||    
T  29127705 acacatttgattacattcaattaactcattttctcaaattat 29127664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 1118409 - 1118445
Alignment:
Q  48 tgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||||||| |||||||||||||||||| |||||||||    
T  1118409 tgtgattacattcaattaattcattttttcaaattat 1118445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 36251257 - 36251301
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaa 87  Q
    |||||||| |||| |||| |||| |||||||||||||||||||||    
T  36251257 acacatgttattacattctattagttcattttctcaaattattaa 36251301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 28322294 - 28322251
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28322294 caacacatgtgattacattcaattaattcattttctcaaattat 28322251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 9878040 - 9878100
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtca 103  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||| |||||| || ||||||    
T  9878040 acacaagtgattacattcaattaattcatattctcaaattattattggtgtcgacgtgtca 9878100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 9895200 - 9895148
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattattaatggtgt 93  Q
    |||||||||||||||  ||||| ||||| ||||||||||||||||| ||||||    
T  9895200 caacacatgtgattacgttcaaataatttattttctcaaattattactggtgt 9895148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 40141334 - 40141299
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttct 76  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40141334 caacacatgtggttaaattcaattaattcattttct 40141299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 16274348 - 16274397
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgt 93  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||    
T  16274348 acacatgtgattacattcaattaattca-tttctcaaatttttactggtgt 16274397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 15086751 - 15086706
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||||||||  ||||| ||||||| |||||||||||||||    
T  15086751 caacacatgtgattacgttcaaataattcactttctcaaattatta 15086706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 39828519 - 39828474
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  39828519 caacacatgtggttacattcaattatttcatattctcaaattatta 39828474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 32444817 - 32444757
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtca 103  Q
    |||||| |||||| ||| |||||  |||| |||||||||| ||||||||||||| ||||||    
T  32444817 acacatttgattacattgaattatgtcatcttctcaaattgttaatggtgttgacgtgtca 32444757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 49636837 - 49636877
Alignment:
Q  46 catgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  49636837 catgtgattacattcaattaattcattttctcaaattatta 49636877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 18268013 - 18268056
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  18268013 acacatgtgattacgttcaattaattcattttctcaaattatta 18268056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 19323456 - 19323496
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaatta 83  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  19323456 acacatgtgattaaattcaattatgtcattttctcaaatta 19323496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 47542586 - 47542543
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||| |||||| || ||||||||||||||||||||    
T  47542586 acacatgtgattacattcaaatagttcattttctcaaattatta 47542543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 19730215 - 19730261
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattattaa 87  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||||    
T  19730215 caacacatgtgatcacattcaattatgtcattttctcaaattattaa 19730261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 19750805 - 19750851
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattattaa 87  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||||    
T  19750805 caacacatgtgatcacattcaattatgtcattttctcaaattattaa 19750851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 9791381 - 9791348
Alignment:
Q  68 tcattttctcaaattattaatggtgttgaagtgt 101  Q
    ||||||||||||||||||||||||||| ||||||    
T  9791381 tcattttctcaaattattaatggtgttaaagtgt 9791348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 13725359 - 13725318
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    ||||||||||||  |||||||||||||||||||||| |||||    
T  13725359 acacatgtgatttcattcaattaattcattttctcatattat 13725318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 20980954 - 20980982
Alignment:
Q  56 aattcaattaattcattttctcaaattat 84  Q
    |||||||||||||||||||||||||||||    
T  20980954 aattcaattaattcattttctcaaattat 20980982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 17285115 - 17285062
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgttga 96  Q
    ||||||||||||||||| |||||  ||||| ||||||||||||| |||||||||    
T  17285115 acacatgtgattaaattgaattatatcattctctcaaattattattggtgttga 17285062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 26993567 - 26993615
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggt 91  Q
    ||||||||||||  ||||| ||| |||||||||||||||||||||||||    
T  26993567 acacatgtgattgcattcagttacttcattttctcaaattattaatggt 26993615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 40826561 - 40826525
Alignment:
Q  48 tgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||||||| ||||||||||||||||||||||||||||    
T  40826561 tgtgattatattcaattaattcattttctcaaattat 40826525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 30177029 - 30177072
Alignment:
Q  60 caattaattcattttctcaaattattaatggtgttgaagtgtca 103  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||    
T  30177029 caattacttcattttctcaaattattactggtgttgacgtgtca 30177072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 46179918 - 46179961
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||    
T  46179918 acacatgtgattatattcaattaatttattttctcaacttatta 46179961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 24401880 - 24401830
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgt 93  Q
    ||||||||||||| ||||||||||| |||||||||||| | ||| ||||||    
T  24401880 acacatgtgattacattcaattaatccattttctcaaaattttactggtgt 24401830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 31837804 - 31837762
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaatta 83  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||    
T  31837804 caacacatgagattacattcaattatttcattttctcaaatta 31837762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 27012175 - 27012134
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||||||||| || ||| ||||||||||||||||||||||||    
T  27012175 acacatgtgaatacatttaattaattcattttctcaaattat 27012134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 20204290 - 20204246
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaa 87  Q
    |||||||||||||  ||||| | ||||||||||||||||||||||    
T  20204290 acacatgtgattacgttcaaatgattcattttctcaaattattaa 20204246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 40688931 - 40688891
Alignment:
Q  46 catgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||| ||| |||||||||||||| |||||||||||    
T  40688931 catgtgattacatttaattaattcattttatcaaattatta 40688891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 44172897 - 44172941
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||||||| ||| |||||  |||||||||||||||||||    
T  44172897 aacacatgtgattacattgaattatgtcattttctcaaattatta 44172941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 10170408 - 10170456
Alignment:
Q  57 attcaattaattcattttctcaaattattaatggtgttgaagtgtcaat 105  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||| ||||    
T  10170408 attcaattaatttattttctcaaattattattggtgttgacgtgccaat 10170456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 3066093 - 3066050
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||    
T  3066093 acacatgttattacattcaattaatccattttctcaaattatta 3066050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 29096997 - 29096954
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  29096997 acacatgtgattacattcaattaatttattttcttaaattatta 29096954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 31551847 - 31551886
Alignment:
Q  47 atgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  31551847 atgtgattatattcaatttattcattttctcaaattatta 31551886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 32145284 - 32145226
Alignment:
Q  47 atgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtcaat 105  Q
    |||||||||  || ||||| | |||||||||||||||||| ||||||| ||||||||||    
T  32145284 atgtgattacgtttaattattccattttctcaaattattactggtgttaaagtgtcaat 32145226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 43806203 - 43806245
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  43806203 aacatatgtgattatattcaattaattcattttcttaaattat 43806245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 1979459 - 1979410
Alignment:
Q  47 atgtgattaaattcaattaattcattttctcaaattattaatggtgttga 96  Q
    ||||||||| ||| |||||||| |||||||||||||||||  ||||||||    
T  1979459 atgtgattacatttaattaattaattttctcaaattattaccggtgttga 1979410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 2517144 - 2517115
Alignment:
Q  57 attcaattaattcattttctcaaattatta 86  Q
    ||||||||||||||||||||||||||||||    
T  2517144 attcaattaattcattttctcaaattatta 2517115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 83
Target Start/End: Complemental strand, 12969234 - 12969205
Alignment:
Q  54 taaattcaattaattcattttctcaaatta 83  Q
    ||||||||||||||||||||||||||||||    
T  12969234 taaattcaattaattcattttctcaaatta 12969205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 13342650 - 13342605
Alignment:
Q  41 caacacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    |||||||||||||| |||| ||||| |||||||| |||||||||||    
T  13342650 caacacatgtgattgaatttaattatttcattttatcaaattatta 13342605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 25799185 - 25799156
Alignment:
Q  57 attcaattaattcattttctcaaattatta 86  Q
    ||||||||||||||||||||||||||||||    
T  25799185 attcaattaattcattttctcaaattatta 25799156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 35198240 - 35198280
Alignment:
Q  44 cacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  35198240 cacatgtgattacattcaattaattcattttcttaaattat 35198280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 42205843 - 42205895
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgttg 95  Q
    |||||| ||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  42205843 acacatatgattattttcaattaagtcattttctcaaattattattggtgttg 42205895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 28341375 - 28341332
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattatta 86  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||    
T  28341375 acacatgtgattacatttaattaattcattttctcaaactatta 28341332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 29263949 - 29263903
Alignment:
Q  203 tgataaattaaagattgagatgcttaccaaatcagccctcctctcctc 250  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||    
T  29263949 tgataaattaaa-actgagatgcttaccaaatcagccctcctttcctc 29263903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 14667708 - 14667666
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaattat 84  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  14667708 aacatatgtgattatattcaattagttcattttctcaaattat 14667666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 17427321 - 17427359
Alignment:
Q  47 atgtgattaaattcaattaattcattttctcaaattatt 85  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  17427321 atgtgattaccttcaattaattcattttctcaaattatt 17427359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 14268756 - 14268801
Alignment:
Q  58 ttcaattaattcattttctcaaattattaatggtgttgaagtgtca 103  Q
    ||||||||| |||||||||||||||||||  |||||||| ||||||    
T  14268756 ttcaattaagtcattttctcaaattattaccggtgttgacgtgtca 14268801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 32102872 - 32102909
Alignment:
Q  47 atgtgattaaattcaattaattcattttctcaaattat 84  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  32102872 atgtgattatattcaattaatttattttctcaaattat 32102909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 16630846 - 16630794
Alignment:
Q  43 acacatgtgattaaattcaattaattcattttctcaaattattaatggtgttg 95  Q
    ||||||||||||||||| |||||  ||||||||| |||||||||  |||||||    
T  16630846 acacatgtgattaaattgaattatgtcattttcttaaattattatcggtgttg 16630794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 38738463 - 38738423
Alignment:
Q  42 aacacatgtgattaaattcaattaattcattttctcaaatt 82  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  38738463 aacacatgtgattacatttaattaattaattttctcaaatt 38738423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 42043208 - 42043264
Alignment:
Q  46 catgtgattaaattcaattaattcattttctcaaattattaatggtgttgaagtgtc 102  Q
    ||||| |||| |||||||||||||||||| | |||||||||  |||||||| |||||    
T  42043208 catgttattacattcaattaattcattttattaaattattatcggtgttgatgtgtc 42043264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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