View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9995_low_4 (Length: 431)
Name: NF9995_low_4
Description: NF9995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9995_low_4 |
 | |
|
| [»] scaffold0570 (1 HSPs) |
| | |
|
| [»] scaffold0479 (1 HSPs) |
| | |
|
| [»] scaffold1476 (1 HSPs) |
| | |
|
| [»] scaffold0233 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 355; Significance: 0; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 23 - 413
Target Start/End: Complemental strand, 48537216 - 48536826
Alignment:
| Q |
23 |
aggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaa |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
48537216 |
aggtaattttgtcgcaggccgaacaacctttctcccccctttacttgatatagagatgggtgaagccataggtctgttgtaggcaatgcagtgggcgaaa |
48537117 |
T |
|
| Q |
123 |
gagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
222 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48537116 |
gagcttaatttggtaagcacagacttcgaatcagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
48537017 |
T |
|
| Q |
223 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc |
322 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
48537016 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaagagacaagccaatagtgtagcccatagcttagatagggaagc |
48536917 |
T |
|
| Q |
323 |
attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttttct |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48536916 |
attatcacatgctagtttccaattgcatcttaatatcccttattgtataacttctttgattaataatgaaaagctataagcttccttttct |
48536826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 23 - 406
Target Start/End: Complemental strand, 51899769 - 51899386
Alignment:
| Q |
23 |
aggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaa |
122 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||| ||| | ||| | || |||||||| ||||||||| |
|
|
| T |
51899769 |
aggtaattttgtcgcaggtcgaacagcctttctatcccctttactcgatgtagagatgggtgaagcaatatggctgctacaagcaatgcaatgggcgaaa |
51899670 |
T |
|
| Q |
123 |
gagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
222 |
Q |
| |
|
||||| || |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| || || | |
|
|
| T |
51899669 |
gagctgaacatggtgagtatggacttcgaaacagactcaaagattgtggcagatagcatttataaaggagatggtgtctctgattttatggcaataattc |
51899570 |
T |
|
| Q |
223 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc |
322 |
Q |
| |
|
|||||||||| || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
51899569 |
atgattgtagacacttgttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccataatttagctagggaagc |
51899470 |
T |
|
| Q |
323 |
attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
51899469 |
actatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttc |
51899386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 22 - 413
Target Start/End: Complemental strand, 16933258 - 16932867
Alignment:
| Q |
22 |
taggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaa |
121 |
Q |
| |
|
|||| ||||||||||||| | ||||| ||| | ||||||||||||| || || |||||||||||||| ||| | || ||| | |||||||||||||| || |
|
|
| T |
16933258 |
tagggaattttgtcgcagccagaacagcctctatctcccctttacttgacattgagatgggtgaagctataaggcttttgtaagcaatgcagtgggcaaa |
16933159 |
T |
|
| Q |
122 |
agagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatc |
221 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||| ||||||||||| |||||||||| || ||| |
|
|
| T |
16933158 |
agagcttaacatggtaagcatggacttcgaaacagactcaaagactgtgacagataaaatttataaaggaaatggtgtctctgattttatggcaattatc |
16933059 |
T |
|
| Q |
222 |
catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag |
321 |
Q |
| |
|
||||||||||| || ||| | |||| ||| ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||| |
|
|
| T |
16933058 |
catgattgtagacacttgctgatgaccgatttaacaaactctgatgtgagtttaattaggagacaagccaatggtgttgcccatagtttagctagggaag |
16932959 |
T |
|
| Q |
322 |
cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttttct |
413 |
Q |
| |
|
||||||||||||||||||||||| | || ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16932958 |
cattatcacatgctagtttccaactatattttaatattccacattgtataactactttgattaataatgaaaagctataagcttccttttct |
16932867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 193 - 413
Target Start/End: Complemental strand, 12723580 - 12723360
Alignment:
| Q |
193 |
atggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaa |
292 |
Q |
| |
|
||||||||| | |||||||||| || |||||||||||||| || ||||| |||| ||| ||| |||||||||||||||||| ||||||||| || ||| |
|
|
| T |
12723580 |
atggtgtctatgattttatggcaattatccatgattgtagacacttgttgatgaccgatttaataaactctgatgtgagtttaattaggagataaatcaa |
12723481 |
T |
|
| Q |
293 |
tagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaa |
392 |
Q |
| |
|
| |||| |||||||| |||||||||||||||||||||||||||| ||||||||| || ||||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
12723480 |
tggtgttgcccatagtttagctagggaagcattatcacatgctaatttccaattatattttaatattccatattgtataactactttgattaataatgaa |
12723381 |
T |
|
| Q |
393 |
aagctataagcttccttttct |
413 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
12723380 |
aagctataaacttccttttct |
12723360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 114 - 406
Target Start/End: Complemental strand, 30468931 - 30468639
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
30468931 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
30468832 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
30468831 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagc |
30468732 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
30468731 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
30468639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 166 - 411
Target Start/End: Original strand, 25737448 - 25737696
Alignment:
| Q |
166 |
ttgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtagg---catttgttaatgatcgacttagcaaactc |
262 |
Q |
| |
|
||||||||||||| || || ||||| |||||||||||||||| |||||| || || || |||||||| || ||||| ||||| | ||||| ||||| |
|
|
| T |
25737448 |
ttgtggcagatagtatctacaaaggggatggtgtctctaattatatggctataattcacgattgtagtagacaattgttgatgattaatttagcgaactc |
25737547 |
T |
|
| Q |
263 |
tgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccct |
362 |
Q |
| |
|
|||||| | ||||||||||||||| || ||| ||| ||||||||| |||||||| |||||||| ||||||| ||||||||| |||||||| || || |
|
|
| T |
25737548 |
tgatgtaaagtttattaggagacaaacctataatgttgcccatagcctagctaggaaagcattacatcatgctaatttccaatttcatcttaacattcca |
25737647 |
T |
|
| Q |
363 |
cattgtataacttctttgattaataatgaaaagctataagcttcctttt |
411 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
25737648 |
cattgtattcatgctttgattaataatgaaaaactataagcttcttttt |
25737696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 406
Target Start/End: Original strand, 31637495 - 31637760
Alignment:
| Q |
141 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
238 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||| ||||| || ||| |||||||||| || || |
|
|
| T |
31637495 |
atggacttcgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgatttcatggcaataatcaatgattgtagacactt |
31637592 |
T |
|
| Q |
239 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
338 |
Q |
| |
|
||| | | ||| |||| ||||||||||||| || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
31637593 |
gttgagtaccgatttagtgaactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
31637692 |
T |
|
| Q |
339 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
31637693 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
31637760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 406
Target Start/End: Complemental strand, 6999653 - 6999442
Alignment:
| Q |
195 |
ggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaata |
294 |
Q |
| |
|
||||||||| |||| ||||| || ||| |||||||||| || ||||| | | | | |||| ||||||||||||| || ||||||||||||| |||| |
|
|
| T |
6999653 |
ggtgtctctgatttcatggcaataatcaatgattgtagacacttgttgagtaccaatttagtgaactctgatgtgaagttcattaggagacaagtcaatg |
6999554 |
T |
|
| Q |
295 |
gtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaa |
394 |
Q |
| |
|
|||| || ||||| ||||||| ||||||| || || |||||| |||| | | |||||| || || |||||||| |||||||||| ||||||||||| |
|
|
| T |
6999553 |
gtgtggctcatagtttagctaaggaagcactacaccacgctagtctccacattcgtcttaacattccacattgtatttcttctttgatcaataatgaaaa |
6999454 |
T |
|
| Q |
395 |
gctataagcttc |
406 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6999453 |
gctataagcttc |
6999442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 25177952 - 25178010
Alignment:
| Q |
348 |
catcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||| || || |||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
25177952 |
catcttaacattccacattgtatttctactttgatcaataatgaaaagctataagcttc |
25178010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 23 - 406
Target Start/End: Original strand, 329979 - 330362
Alignment:
| Q |
23 |
aggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaa |
122 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||| ||||| ||| | || |||||||| ||||||||| |
|
|
| T |
329979 |
aggtaattttgtcgcaggtcgaacagcctttctatcccctttactcgatgtagagatgggtgaagcaatagggctgctacaagcaatgcaatgggcgaaa |
330078 |
T |
|
| Q |
123 |
gagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
222 |
Q |
| |
|
||||| || |||| || |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| || || | |
|
|
| T |
330079 |
gagctgaacatggtgagtatggacttcgaaacagactcaaagattgtggcatatagcatttataaaggagatggtgtctctgattttatggcaataattc |
330178 |
T |
|
| Q |
223 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc |
322 |
Q |
| |
|
|||||||||| || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
330179 |
atgattgtagacacttgttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagctagggaagc |
330278 |
T |
|
| Q |
323 |
attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
330279 |
actatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaaactataagcttc |
330362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 406
Target Start/End: Complemental strand, 13997425 - 13997160
Alignment:
| Q |
141 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
238 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||| ||| ||| |||||| ||||||||| |||||||||| || ||| |||||||||| || || |
|
|
| T |
13997425 |
atggacttcgaaacagactcaaaagttgtggctgataacatatatggcaaggag--ggtgtctctgattttatggcaataatcaatgattgtagacactt |
13997328 |
T |
|
| Q |
239 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
338 |
Q |
| |
|
||| | | ||| |||| ||||||||||| | || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
13997327 |
gttgagtaccgatttagtgaactctgatgttaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
13997228 |
T |
|
| Q |
339 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||| | |||||||| || || |||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
13997227 |
ctccacattcatcttaacattccacattgtatttattctttgatcaataatgaaaagctataagcttc |
13997160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 6816301 - 6816241
Alignment:
| Q |
350 |
tcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttt |
410 |
Q |
| |
|
|||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6816301 |
tcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttccttt |
6816241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 344
Target Start/End: Complemental strand, 34701438 - 34701261
Alignment:
| Q |
166 |
ttgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctga |
265 |
Q |
| |
|
||||||||||||| || || ||||| || |||| | | |||||||||| || || | ||||||||| || ||||| | ||| || |||| |||||||| |
|
|
| T |
34701438 |
ttgtggcagatagtatctacaaaggggacagtgtttttgattttatggctataattcgtgattgtagacacttgttgacgattgatttagtgaactctga |
34701339 |
T |
|
| Q |
266 |
tgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaa |
344 |
Q |
| |
|
| ||| || ||||| |||||| ||||||| | |||||||| |||||||||| |||| || ||||||||||||||| |
|
|
| T |
34701338 |
tttgaagttcattagaagacaaaccaatagagccgcccatagtttagctaggg-agcactaaatcatgctagtttccaa |
34701261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 23 - 409
Target Start/End: Original strand, 48207298 - 48207684
Alignment:
| Q |
23 |
aggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaa |
122 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| | ||||||||||||||| ||||||| ||||| || ||||| ||| | || |||||||||||||||||| |
|
|
| T |
48207298 |
aggtaattttgtcgcaggtcgaacagcctttatatcccctttactcgatgtagagataggtgaggcaatagggctgctacaagcaatgcagtgggcgaaa |
48207397 |
T |
|
| Q |
123 |
gagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
222 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||| || || | |
|
|
| T |
48207398 |
gagcttaacatggtgagcatggatttcgaaacagactcaaagattgtggcagatagcatttataaaggaaatggtgactctgattttatggcaataattc |
48207497 |
T |
|
| Q |
223 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc |
322 |
Q |
| |
|
|||||||||| || || || |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
48207498 |
atgattgtagacactttttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagctagggaagc |
48207597 |
T |
|
| Q |
323 |
attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctt |
409 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
48207598 |
actatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttcctt |
48207684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 406
Target Start/End: Original strand, 5045367 - 5045653
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| |||||||| ||| | || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
5045367 |
tgggcgaaagacctaaatttagtaaatatggatttcgaaacggacgcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
5045466 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| || ||||| |||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
5045467 |
ccataatacacgattgtagacatctattaatgactgatttagcgaa------tgtgaagtttattaggagacaagccaatagtgttgcccataatctagc |
5045560 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
5045561 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagttataagcttc |
5045653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 30 - 410
Target Start/End: Original strand, 14585636 - 14586016
Alignment:
| Q |
30 |
tttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaagagctta |
129 |
Q |
| |
|
|||||||||| | ||||||||| | ||||||||||||| || | |||||||||||||| ||||| || |||| |||||||||||||| |||||||||| |
|
|
| T |
14585636 |
tttgtcgcagccagaacaacctctatctcccctttacttgacgttgagatgggtgaagctatagggcttctgcaagcaatgcagtgggcaaaagagctta |
14585735 |
T |
|
| Q |
130 |
atttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattg |
229 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| || || |||||||| |
|
|
| T |
14585736 |
acatggtaagcatggacttcgaaacagactctaagattgtgacagatagcatttatgaaggagatggtgtctctgattttatggcaattattcatgattg |
14585835 |
T |
|
| Q |
230 |
taggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatca |
329 |
Q |
| |
|
|| || ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
14585836 |
taaacacttgttgatgaccgacttagcaaactctgatgtgaattttattaggagacaagccaatggtgttgcccatagtttagctagggaagcattatca |
14585935 |
T |
|
| Q |
330 |
catgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttt |
410 |
Q |
| |
|
||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14585936 |
catgctagtttccaattatatcttaatattccacattgtataactagtttgattaataatgaaaagctataagcttccttt |
14586016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 23 - 403
Target Start/End: Complemental strand, 33737838 - 33737458
Alignment:
| Q |
23 |
aggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaa |
122 |
Q |
| |
|
|||||||||||||||||| |||||||||||| | ||||||||||| ||| |||||||||||||||| ||||| ||| | || |||||||||||||||||| |
|
|
| T |
33737838 |
aggtaattttgtcgcaggtcgaacaacctttttatcccctttacttgatgtagagatgggtgaagcgataggactgctacaagcaatgcagtgggcgaaa |
33737739 |
T |
|
| Q |
123 |
gagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
222 |
Q |
| |
|
|||||||| |||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| || || | |
|
|
| T |
33737738 |
gagcttaacatggtgagcatggattttgaaacagactcaaagattgtggcagatagtgtttataaaggaaatggtgtctctgattttatggcaataattc |
33737639 |
T |
|
| Q |
223 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc |
322 |
Q |
| |
|
| |||||||| || ||||| |||| ||| |||| |||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
33737638 |
aagattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattaggagacaagccaatggtgttgcccatagtttagctagggaagc |
33737539 |
T |
|
| Q |
323 |
attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc |
403 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
33737538 |
gctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc |
33737458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 406
Target Start/End: Complemental strand, 45274535 - 45274243
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
45274535 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
45274436 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| || |||| |||| |
|
|
| T |
45274435 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgctcataatctagc |
45274336 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
45274335 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
45274243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 141 - 406
Target Start/End: Original strand, 35322245 - 35322510
Alignment:
| Q |
141 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
238 |
Q |
| |
|
||||| |||||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||| ||||| || ||| |||||||||| || || |
|
|
| T |
35322245 |
atggaattcgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgatttcatggcaataatcaatgattgtagacactt |
35322342 |
T |
|
| Q |
239 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
338 |
Q |
| |
|
||| | | ||| |||| ||||||||||||| || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
35322343 |
gttgagtaccgatttagtgaactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
35322442 |
T |
|
| Q |
339 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
35322443 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
35322510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 6663165 - 6663242
Alignment:
| Q |
243 |
atgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaa |
320 |
Q |
| |
|
||||| || ||||||||||||||||||| |||||||||| |||| |||||||| |||||||| |||| ||||||| |
|
|
| T |
6663165 |
atgattgatttagcaaactctgatgtgaagtttattaggatacaatttaatagtgttgcccatagtttagttagggaa |
6663242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 404
Target Start/End: Original strand, 3215179 - 3215207
Alignment:
| Q |
376 |
ctttgattaataatgaaaagctataagct |
404 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3215179 |
ctttgattaataatgaaaagctataagct |
3215207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 23 - 403
Target Start/End: Complemental strand, 36481139 - 36480759
Alignment:
| Q |
23 |
aggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaa |
122 |
Q |
| |
|
|||||||||||||||||| |||||||||||| | ||||||||||| ||| |||||||||||||||| ||||| ||| | || |||||||||||||||||| |
|
|
| T |
36481139 |
aggtaattttgtcgcaggtcgaacaacctttttatcccctttacttgatgtagagatgggtgaagcgataggactgctacaagcaatgcagtgggcgaaa |
36481040 |
T |
|
| Q |
123 |
gagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
222 |
Q |
| |
|
|||||||| |||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| || || | |
|
|
| T |
36481039 |
gagcttaacatggtgagcatggattttgaaacagactcaaagattgtggcagatagtgtttataaaggaaatggtgtctctgattttatggcaataattc |
36480940 |
T |
|
| Q |
223 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc |
322 |
Q |
| |
|
| |||||||| || ||||| |||| ||| |||| |||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
36480939 |
aagattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattaggagacaagccaatggtgttgcccatagtttagctagggaagc |
36480840 |
T |
|
| Q |
323 |
attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc |
403 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
36480839 |
gctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc |
36480759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 222 - 409
Target Start/End: Original strand, 48254960 - 48255147
Alignment:
| Q |
222 |
catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag |
321 |
Q |
| |
|
|||||| |||| |||||||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| |||||||| |
|
|
| T |
48254960 |
catgatcgtagacatttgttgatgaccgatttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagttagggaag |
48255059 |
T |
|
| Q |
322 |
cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctt |
409 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
48255060 |
cactatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttcctt |
48255147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 114 - 406
Target Start/End: Complemental strand, 36221019 - 36220727
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| |||||||| ||||| || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
36221019 |
tgggcgaaagacctaaatttagtaaatatggatttcgaaacggactcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
36220920 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| | ||||||||||||||||||||| | ||||||| |||| |
|
|
| T |
36220919 |
ccataatacacgattgtagacatctattaatgactgatttagcgaactctgatgtgaagtccattaggagacaagccaatagtattgcccataatctagc |
36220820 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
36220819 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagctataagcttc |
36220727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 141 - 406
Target Start/End: Original strand, 6682672 - 6682937
Alignment:
| Q |
141 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
238 |
Q |
| |
|
|||||||| ||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||||||||| || ||| |||||||||| || || |
|
|
| T |
6682672 |
atggactttgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgattttatggcaataatcaatgattgtagacactt |
6682769 |
T |
|
| Q |
239 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
338 |
Q |
| |
|
||| | | ||| |||| ||||||||||| | || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
6682770 |
gttgagtaccgatttagtgaactctgatgtaaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
6682869 |
T |
|
| Q |
339 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
6682870 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
6682937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 393
Target Start/End: Complemental strand, 12702233 - 12701957
Alignment:
| Q |
117 |
gcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggcca |
216 |
Q |
| |
|
|||||||| || |||||||||| ||||| |||||||| ||||| || | || ||||| || || ||||| |||||||| ||||| ||||| ||||||| |
|
|
| T |
12702233 |
gcgaaagacctaaatttggtaaatatggatttcgaaacggactcaaaagtggtagcagaaagtatctataagggagatggggtctcaaatttcatggcca |
12702134 |
T |
|
| Q |
217 |
tcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctag |
316 |
Q |
| |
|
| || || |||||||| || | ||||||| || ||||| ||||||||||||| || |||||||||||| |||||||| | ||| ||| || |||| |
|
|
| T |
12702133 |
taatacacgattgtagacacctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaaaccaatagttttgcctataatctaactag |
12702034 |
T |
|
| Q |
317 |
ggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaa |
393 |
Q |
| |
|
||||||| || ||| |||||||||| | |||| |||||| || |||| |||| | |||||||||||||||||| |
|
|
| T |
12702033 |
ggaagcactaaatcatcctagtttccattatcatcctaatattccacattctatacatactttgattaataatgaaa |
12701957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 393
Target Start/End: Original strand, 12904047 - 12904249
Alignment:
| Q |
191 |
agatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagcc |
290 |
Q |
| |
|
|||||||||||| ||||| |||||||| || || |||||||| || | ||||||| || ||||| ||||| |||||| || ||||||||||||||| |
|
|
| T |
12904047 |
agatggtgtctcaaatttcatggccataatacacgattgtagacacctattaatgactgatttagcgaactcatatgtgaagttcattaggagacaagcc |
12904146 |
T |
|
| Q |
291 |
aatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatg |
390 |
Q |
| |
|
|||||||| ||| ||| || ||||||||||| || ||| |||||||||| | ||||||||||| || |||| |||| | ||||||||||||||| |
|
|
| T |
12904147 |
aatagtgttgcctataatctaactagggaagcactaaatcatcctagtttccattatcatcttaatattccacattctatacatactttgattaataatg |
12904246 |
T |
|
| Q |
391 |
aaa |
393 |
Q |
| |
|
||| |
|
|
| T |
12904247 |
aaa |
12904249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 33037261 - 33037137
Alignment:
| Q |
195 |
ggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaata |
294 |
Q |
| |
|
||||||||| |||| ||| |||| || || ||||||| ||| ||||||||| | ||| ||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
33037261 |
ggtgtctctgatttcatgaccataatacacaattgtagacatctgttaatgactaatttaacaaactctgatgtgaagtttattaggagacaaaccaata |
33037162 |
T |
|
| Q |
295 |
gtgtagcccatagcttagctaggga |
319 |
Q |
| |
|
|||| |||||||| ||||||||||| |
|
|
| T |
33037161 |
gtgttgcccatagtttagctaggga |
33037137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0570 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0570
Description:
Target: scaffold0570; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 403
Target Start/End: Complemental strand, 5215 - 4839
Alignment:
| Q |
23 |
aggtaattttgtcgcaggccgaacaacctttctctcccctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaa |
122 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| | ||||||||||| ||| |||||||||||||||| ||||| ||| | || ||||||||||||| |||| |
|
|
| T |
5215 |
aggtaattttgtcgcaggtcgaacagcctttttatcccctttacttgatgtagagatgggtgaagcgataggactgctacaagcaatgcagtgggtgaaa |
5116 |
T |
|
| Q |
123 |
gagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatcc |
222 |
Q |
| |
|
|||||||| |||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| || || | |
|
|
| T |
5115 |
gagcttaacatggtgagcatggattttgaaacagactcaaagattgtggcagatagtgtttataaaggaaatggtgtctctgattttatggcaataattc |
5016 |
T |
|
| Q |
223 |
atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc |
322 |
Q |
| |
|
| |||||||| || ||||| |||| ||| |||| |||||||||||||||||| ||||| |||||||||||| |||| |||||||| |||||| || | |
|
|
| T |
5015 |
aagattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattagaagacaagccaatggtgttgcccatagtttagct----aaac |
4920 |
T |
|
| Q |
323 |
attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc |
403 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
4919 |
gctatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc |
4839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0479 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0479
Description:
Target: scaffold0479; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 193 - 413
Target Start/End: Original strand, 10765 - 10985
Alignment:
| Q |
193 |
atggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaa |
292 |
Q |
| |
|
||||||||||| |||||||| | || |||||||||||||| || ||||| |||| ||| ||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10765 |
atggtgtctctgattttatgccaattatccatgattgtagacacttgttgatgaccgatttaacaaactctgatgtgagtttaattaggagacaagccaa |
10864 |
T |
|
| Q |
293 |
tagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaa |
392 |
Q |
| |
|
| |||| |||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
10865 |
tcgtgttgcccatagtttagctaaggaagcattatcacatgctagtttccaattatattttaatattccacattgtataactactttgattaataatgaa |
10964 |
T |
|
| Q |
393 |
aagctataagcttccttttct |
413 |
Q |
| |
|
|||| |||| |||||||||| |
|
|
| T |
10965 |
aagcaataaaattccttttct |
10985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 150 - 405
Target Start/End: Original strand, 39648177 - 39648432
Alignment:
| Q |
150 |
gaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcg |
249 |
Q |
| |
|
|||||||||||||| |||| | ||| || ||||| ||||| |||||||||||| ||||||||||||| || ||||||||||| || ||||| |||| | |
|
|
| T |
39648177 |
gaaacagactctaaagttgtagtagacagtatttacaaaggggatggtgtctctgattttatggccataattcatgattgtagacacttgttgatgactg |
39648276 |
T |
|
| Q |
250 |
acttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgca |
349 |
Q |
| |
|
| ||||| ||||| ||||||| || || | |||||| ||||||||||| |||||||| ||||||| ||||||| ||| ||||||||||| | | ||| |
|
|
| T |
39648277 |
atttagcgaactcagatgtgaagttcatcaagagacaggccaatagtgttgcccatagtttagctaaggaagcactatattatgctagtttcgagtagca |
39648376 |
T |
|
| Q |
350 |
tcttaatatccctcattgtataacttctttgattaataatgaaaagctataagctt |
405 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39648377 |
tcttaatattctacattgtataacttctttgattaataaagaaaagctataagctt |
39648432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 114 - 406
Target Start/End: Original strand, 12997140 - 12997432
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
12997140 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
12997239 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
12997240 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagc |
12997339 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
12997340 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
12997432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 406
Target Start/End: Original strand, 26423107 - 26423399
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| ||| |||| ||||| || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
26423107 |
tgggcgaaagacctaaatttagtaaatatggatttcaaaacggactcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
26423206 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
||| || || |||||||| ||| | ||||||| || |||| ||||||||||||| || ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
26423207 |
tcataatacacgattgtagacatctattaatgactgatttagtgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagc |
26423306 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || | |||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
26423307 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacgttgtattcatactttgattaataatgaaaagctataagcttc |
26423399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 26999364 - 26999250
Alignment:
| Q |
205 |
attttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagccca |
304 |
Q |
| |
|
|||||||||| || || | ||||||||| || ||||| ||||| || |||| ||||||||| ||| || ||||| |||||||||||||| | ||||| |
|
|
| T |
26999364 |
attttatggctataattcgtgattgtagacacttgttgatgattgatttagtgaactctgatttgaagttcattagaagacaagccaatagagccgccca |
26999265 |
T |
|
| Q |
305 |
tagcttagctaggga |
319 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
26999264 |
tagtttagctaggga |
26999250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 404
Target Start/End: Complemental strand, 14150270 - 14150242
Alignment:
| Q |
376 |
ctttgattaataatgaaaagctataagct |
404 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14150270 |
ctttgattaataatgaaaagctataagct |
14150242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 114 - 405
Target Start/End: Complemental strand, 22697848 - 22697557
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| |||||||| ||||| || | |||||||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
22697848 |
tgggcgaaagacctaaatttagtaaatatggatttcgaaacggactcaaaagtggtggcagagaatatctataagggggatggtgtctcagatttcatgg |
22697749 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
22697748 |
ccataatacacgattgtagacatctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagc |
22697649 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagctt |
405 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
22697648 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagctataagctt |
22697557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 114 - 406
Target Start/End: Original strand, 31089315 - 31089607
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || ||||| |||| ||||| || ||||||||||| || | |||| ||| | || ||||| || ||||||||||| |||| |||| |
|
|
| T |
31089315 |
tgggcgaaagacctaaatttagtaaatatggattttgaaacagactcaaaagtggtggtagagaatatctataagggggatggtgtctcagatttcatgg |
31089414 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || || |||||||| ||| | ||||||| || ||||| ||||||||||||| || |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
31089415 |
ccataatacacgattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagc |
31089514 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||||||||| || |||||||||||||| | ||||||||||| || |||||||| | |||| |||||||||||||||||||||||||| |
|
|
| T |
31089515 |
tagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc |
31089607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 60 - 406
Target Start/End: Original strand, 24442400 - 24442746
Alignment:
| Q |
60 |
cctttactcgatatagagatgggtgaagccataggtctgttgcaggcaatgcagtgggcgaaagagcttaatttggtaagcatggacttcgaaacagact |
159 |
Q |
| |
|
|||||||| ||| | || ||||||||||| ||||| || |||| || |||| ||||||||||| || |||||||||| ||||| |||||||| |||| |
|
|
| T |
24442400 |
cctttacttgatgtggaaatgggtgaagctataggactcctgcatgctatgcgatgggcgaaagacctaaatttggtaaatatggatttcgaaacggact |
24442499 |
T |
|
| Q |
160 |
ctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaa |
259 |
Q |
| |
|
| || | |||||||| || || ||||| | |||||||| || |||| |||||||| || || |||||||| ||| | ||||||| || ||||| || |
|
|
| T |
24442500 |
caaaagtggtggcagagagtatctataagagggatggtgtatcagatttcatggccataatacacgattgtagacatctattaatgactgatttagcgaa |
24442599 |
T |
|
| Q |
260 |
ctctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatc |
359 |
Q |
| |
|
||||||||||| || |||||||||||| |||||||||| ||||||| ||||||| |||||| || |||||||||||||| | ||||||||||| |
|
|
| T |
24442600 |
ctctgatgtgaagttcattaggagacaaaccaatagtgttgcccataatctagctagagaagcactaaatcatgctagtttccattatcatcttaatatt |
24442699 |
T |
|
| Q |
360 |
cctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
| |||||||| | |||||||||||||| |||| ||||||||||| |
|
|
| T |
24442700 |
ctacattgtattcatactttgattaataattaaaaactataagcttc |
24442746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 105 - 406
Target Start/End: Original strand, 18678373 - 18678674
Alignment:
| Q |
105 |
gcaatgcagtgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctcta |
204 |
Q |
| |
|
|||||||| |||| |||||||| ||| |||| |||||||||||||||| ||| ||| || |||||||||||||| ||| | || | ||||||| |
|
|
| T |
18678373 |
gcaatgcaatgggtaaaagagctgaatatggtgcacatggacttcgaaacaaactataaaatagtggcagatagcatatatggaaaggacgatgtctctg |
18678472 |
T |
|
| Q |
205 |
attttatggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagccca |
304 |
Q |
| |
|
|||| ||||| || || |||||||||| ||||||||| | ||| |||| ||||||| |||||||||| ||||||||||||||||||||||| || || |
|
|
| T |
18678473 |
atttcatggcaataattaatgattgtagacatttgttaggtaccgatttagtaaactctaatgtgagtttcattaggagacaagccaatagtgttgctca |
18678572 |
T |
|
| Q |
305 |
tagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagct |
404 |
Q |
| |
|
||| ||||||| |||| || ||| |||||||| |||| | |||||||| |||| |||||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
18678573 |
tagtttagctaaggaatcactatacaatgctagtctccatgttcatcttaacatcctacattgtatttctacttcaattaataatgaaaagctataagct |
18678672 |
T |
|
| Q |
405 |
tc |
406 |
Q |
| |
|
|| |
|
|
| T |
18678673 |
tc |
18678674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 406
Target Start/End: Complemental strand, 33305198 - 33304933
Alignment:
| Q |
141 |
atggacttcgaaacagactctaagattgtggcagatagcatttata--aaggagatggtgtctctaattttatggccatcatccatgattgtaggcattt |
238 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||| ||| |||||| ||||||||| |||| ||||| || ||| |||||||||| || || |
|
|
| T |
33305198 |
atggacttcgaaacagactcaaaagttgtggctgatagcatatatggcaaggag--ggtgtctctgatttcatggcaataatcaatgattgtagacactt |
33305101 |
T |
|
| Q |
239 |
gttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagt |
338 |
Q |
| |
|
||| | | ||| |||| ||||||||||||| || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| || || |||||| |
|
|
| T |
33305100 |
gttgagtaccgatttagtgaactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagt |
33305001 |
T |
|
| Q |
339 |
ttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|||| | |||||||| || || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
33305000 |
ctccacattcatcttaacattccacattgtatttcttctttgatcaataatgaaaagctataagcttc |
33304933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 411
Target Start/End: Original strand, 20864042 - 20864177
Alignment:
| Q |
273 |
tttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataa |
372 |
Q |
| |
|
|||||||| ||||||||||| ||||| || |||||| |||||||||| |||||| |||||| ||||||||| ||| | || || |||| ||| |
|
|
| T |
20864042 |
tttattagaagacaagccaacagtgttgctcatagcatagctagggaggcattacataatgctattttccaatttcatt---acattccacattctattc |
20864138 |
T |
|
| Q |
373 |
cttctttgattaataatgaaaagctataagcttcctttt |
411 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20864139 |
atactttgattaataatgaaaagctataagcttcttttt |
20864177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 406
Target Start/End: Complemental strand, 17904946 - 17904654
Alignment:
| Q |
114 |
tgggcgaaagagcttaatttggtaagcatggacttcgaaacagactctaagattgtggcagatagcatttataaaggagatggtgtctctaattttatgg |
213 |
Q |
| |
|
||||||||||| || |||||||||| ||| | |||||||| ||||| || | |||| ||| || || ||||| | ||||||||||| |||| |||| |
|
|
| T |
17904946 |
tgggcgaaagacctaaatttggtaaatatgaatttcgaaacggactcaaaagtggtggaagaaagtatctataagagggatggtgtctcagatttcatgg |
17904847 |
T |
|
| Q |
214 |
ccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagc |
313 |
Q |
| |
|
|||| || | |||||||| || | ||||||| || ||||| ||||||||||||| || ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
17904846 |
ccataatatacgattgtagacacctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagc |
17904747 |
T |
|
| Q |
314 |
tagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
||||||| || || |||||||||||||| | |||| |||||| || ||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
17904746 |
tagggaaacactaaatcatgctagtttccattatcatcctaatattccacattgtatacatactttgattaataatgaaaagctataagcttc |
17904654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1476 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1476
Description:
Target: scaffold1476; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 406
Target Start/End: Complemental strand, 1385 - 1238
Alignment:
| Q |
259 |
actctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatat |
358 |
Q |
| |
|
||||| ||||||||||| || ||||| ||| |||| ||| | ||||| ||||||| | ||||| ||| ||||||||| ||||| | |||| ||| || |
|
|
| T |
1385 |
actctaatgtgagttttgttcggagagaagtcaatggtgctgttcatagtttagctaagcaagcactataccatgctagtctccaaattcatcgtaacat |
1286 |
T |
|
| Q |
359 |
ccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|| |||||||| || |||||||||||||||||||||||||| |||| |
|
|
| T |
1285 |
tccacattgtatttctactttgattaataatgaaaagctataaacttc |
1238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 406
Target Start/End: Complemental strand, 19399 - 19250
Alignment:
| Q |
257 |
aaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaat |
356 |
Q |
| |
|
|||||||||||||| || ||||||||||||| |||| |||| || |||| ||| ||| ||||||| | || ||||| |||| | ||||||||| |
|
|
| T |
19399 |
aaactctgatgtgaagttcattaggagacaagtcaatggtgttgcttatagtttaactaaggaagcacaacaccacactagtctccacattcatcttaat |
19300 |
T |
|
| Q |
357 |
atccctcattgtataacttctttgattaataatgaaaagctataagcttc |
406 |
Q |
| |
|
|| || |||||||| || ||||||| ||||||||||||||||||||||| |
|
|
| T |
19299 |
attccacattgtattcctactttgatcaataatgaaaagctataagcttc |
19250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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