View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9998_low_35 (Length: 239)
Name: NF9998_low_35
Description: NF9998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9998_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 58 - 223
Target Start/End: Complemental strand, 36965474 - 36965302
Alignment:
| Q |
58 |
aatgtgtcccttgatcagggaaatgagatcataactcacaagcaagtatacacacggcgttaaaaaatatggcgtttttaccttgtagaatgtgaggtgg |
157 |
Q |
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| T |
36965474 |
aatgtgtcccttgatcagggaaatgagatcataactcacaagcaagtatacacacggcgttaaaaaatatggcgtttttaccttgtagaatgtgaggtgg |
36965375 |
T |
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| Q |
158 |
taa-------agacacaacataacaaaggaaaatgtcgggtaaatggggagaaaatggtatttgacagaagat |
223 |
Q |
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| T |
36965374 |
taaagactaaagacacaacataacaaaggaaaatgtcgggtaaatggggagaaaatggtatttgacagaagat |
36965302 |
T |
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