View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9998_low_37 (Length: 221)
Name: NF9998_low_37
Description: NF9998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9998_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 31652694 - 31652486
Alignment:
| Q |
1 |
ttttgaagacaataataccctttgattcttgttgggatattatgaagccgcccacgtgttttatttgttcattcaaactagtaaagggtaattagggttg |
100 |
Q |
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| T |
31652694 |
ttttgaagacaataataccctttgattcttgttgggatactatgaagccgcccacgtgttttatttgttcattcaaactagtaaagggtaattagggttg |
31652595 |
T |
|
| Q |
101 |
taaagtatgcatgtacggacaaataccagattggtaattgattcttaatttttcattatttccctacttggtcggtcattcaagattgtataccaattaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31652594 |
taaagtatgcatgtacggacaaataccagattggtaattgattcttaatttttcattatttccctacttggtcggtcattcaagattgtataccaattaa |
31652495 |
T |
|
| Q |
201 |
caacattct |
209 |
Q |
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||||||||| |
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| T |
31652494 |
caacattct |
31652486 |
T |
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