View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9999_low_1 (Length: 1074)

Name: NF9999_low_1
Description: NF9999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9999_low_1
NF9999_low_1
[»] chr3 (46 HSPs)
chr3 (17-754)||(30665723-30666466)
chr3 (1033-1074)||(25441498-25441539)
chr3 (1025-1074)||(52904133-52904182)
chr3 (584-630)||(1395610-1395655)
chr3 (1025-1074)||(38130948-38130998)
chr3 (1033-1066)||(1111839-1111872)
chr3 (1037-1074)||(8238586-8238623)
chr3 (1025-1074)||(25505691-25505740)
chr3 (1033-1074)||(32843260-32843301)
chr3 (1033-1074)||(34899119-34899160)
chr3 (1036-1069)||(35347296-35347329)
chr3 (1037-1074)||(49975807-49975844)
chr3 (1033-1069)||(8075812-8075848)
chr3 (1034-1074)||(13829076-13829116)
chr3 (1033-1069)||(20612275-20612311)
chr3 (1034-1074)||(33745121-33745161)
chr3 (1034-1074)||(35191816-35191856)
chr3 (1033-1069)||(48849761-48849797)
chr3 (1026-1074)||(52172778-52172826)
chr3 (1043-1074)||(1743934-1743965)
chr3 (1035-1074)||(2153501-2153540)
chr3 (1026-1069)||(21160079-21160122)
chr3 (1024-1074)||(25727955-25728006)
chr3 (1035-1074)||(41817521-41817560)
chr3 (1035-1074)||(45431970-45432009)
chr3 (1033-1068)||(45885475-45885510)
chr3 (585-623)||(2128344-2128381)
chr3 (1025-1074)||(4601866-4601916)
chr3 (1035-1069)||(16663236-16663270)
chr3 (1036-1074)||(20018219-20018257)
chr3 (1036-1074)||(21245815-21245853)
chr3 (1025-1074)||(25340913-25340963)
chr3 (1036-1066)||(27185507-27185537)
chr3 (1036-1066)||(35863814-35863844)
chr3 (581-631)||(45535367-45535416)
chr3 (1035-1069)||(53207997-53208031)
chr3 (1036-1069)||(913601-913634)
chr3 (1033-1066)||(2186425-2186458)
chr3 (1033-1074)||(7464489-7464530)
chr3 (1033-1074)||(8136630-8136671)
chr3 (1033-1074)||(10922306-10922347)
chr3 (743-784)||(40294796-40294837)
chr3 (1036-1069)||(48656900-48656933)
chr3 (1041-1074)||(53996321-53996354)
chr3 (1033-1074)||(54230097-54230138)
chr3 (1025-1069)||(55066589-55066634)
[»] chr5 (33 HSPs)
chr5 (20-412)||(34435088-34435480)
chr5 (1033-1074)||(24408517-24408558)
chr5 (1025-1074)||(6489029-6489079)
chr5 (1026-1069)||(21139139-21139182)
chr5 (1025-1074)||(15889433-15889483)
chr5 (1025-1074)||(22522790-22522840)
chr5 (1033-1074)||(5846051-5846092)
chr5 (1033-1074)||(40715947-40715988)
chr5 (1033-1073)||(979823-979863)
chr5 (585-629)||(7096214-7096257)
chr5 (1026-1069)||(9893661-9893705)
chr5 (1026-1066)||(12190022-12190062)
chr5 (587-631)||(12595536-12595579)
chr5 (1026-1074)||(37614331-37614379)
chr5 (1026-1069)||(5614792-5614835)
chr5 (1031-1074)||(34436873-34436916)
chr5 (1025-1074)||(6624798-6624848)
chr5 (1025-1074)||(11720916-11720965)
chr5 (585-623)||(12407754-12407791)
chr5 (585-623)||(13224369-13224406)
chr5 (1036-1074)||(17465396-17465434)
chr5 (1036-1074)||(33014245-33014283)
chr5 (1037-1074)||(3389184-3389221)
chr5 (1033-1066)||(10705989-10706022)
chr5 (585-622)||(12460094-12460130)
chr5 (1033-1066)||(13864374-13864407)
chr5 (1033-1066)||(20721080-20721113)
chr5 (1036-1069)||(31708147-31708180)
chr5 (1033-1074)||(32200445-32200486)
chr5 (1035-1068)||(32229092-32229125)
chr5 (1033-1074)||(34191455-34191496)
chr5 (585-630)||(39128579-39128623)
chr5 (1036-1069)||(42473921-42473954)
[»] chr4 (59 HSPs)
chr4 (41-411)||(6853480-6853850)
chr4 (590-630)||(24371039-24371079)
chr4 (1034-1069)||(6087774-6087809)
chr4 (1033-1068)||(17729454-17729489)
chr4 (1028-1074)||(1753345-1753391)
chr4 (1025-1074)||(43034331-43034381)
chr4 (1031-1069)||(44815968-44816006)
chr4 (1033-1066)||(10035295-10035328)
chr4 (1033-1074)||(11949761-11949802)
chr4 (1033-1074)||(16431638-16431679)
chr4 (1033-1074)||(21318251-21318292)
chr4 (1033-1074)||(38374979-38375020)
chr4 (1033-1074)||(47806254-47806295)
chr4 (1034-1074)||(675940-675980)
chr4 (1033-1065)||(6610294-6610326)
chr4 (1033-1069)||(19479475-19479511)
chr4 (1034-1074)||(20383510-20383550)
chr4 (1033-1069)||(22164267-22164303)
chr4 (1033-1069)||(22630358-22630394)
chr4 (1033-1069)||(37930845-37930881)
chr4 (1026-1074)||(40901128-40901176)
chr4 (1033-1069)||(49041979-49042015)
chr4 (585-629)||(51044546-51044589)
chr4 (585-629)||(52645836-52645879)
chr4 (1033-1069)||(54294420-54294456)
chr4 (1035-1074)||(14542760-14542799)
chr4 (1035-1074)||(17133780-17133819)
chr4 (1035-1074)||(20799394-20799433)
chr4 (1035-1074)||(49308842-49308881)
chr4 (1033-1072)||(50152236-50152275)
chr4 (585-623)||(6364089-6364126)
chr4 (1036-1074)||(7230302-7230340)
chr4 (1025-1074)||(9946449-9946499)
chr4 (1033-1067)||(11198357-11198391)
chr4 (1035-1069)||(18903758-18903792)
chr4 (1033-1067)||(23247596-23247630)
chr4 (585-623)||(25487638-25487675)
chr4 (1025-1074)||(28435237-28435287)
chr4 (1036-1074)||(39974524-39974562)
chr4 (1035-1069)||(54859709-54859743)
chr4 (1025-1074)||(56497597-56497647)
chr4 (1036-1073)||(2434459-2434496)
chr4 (1029-1074)||(7248358-7248403)
chr4 (1041-1074)||(12698619-12698652)
chr4 (1033-1074)||(13121566-13121607)
chr4 (1033-1074)||(21114303-21114344)
chr4 (1036-1069)||(21317339-21317372)
chr4 (1033-1074)||(24785460-24785501)
chr4 (1033-1074)||(24822765-24822806)
chr4 (1037-1074)||(25783451-25783488)
chr4 (1033-1074)||(37921768-37921809)
chr4 (1036-1069)||(43782306-43782339)
chr4 (1037-1074)||(47015570-47015607)
chr4 (1033-1066)||(47814249-47814282)
chr4 (1033-1074)||(48226496-48226537)
chr4 (1037-1074)||(49953405-49953442)
chr4 (1033-1074)||(52132300-52132341)
chr4 (1025-1069)||(54857604-54857649)
chr4 (1033-1074)||(56551590-56551631)
[»] chr2 (38 HSPs)
chr2 (1025-1074)||(10735820-10735870)
chr2 (1025-1074)||(24592835-24592885)
chr2 (1035-1074)||(23407018-23407057)
chr2 (1025-1074)||(9547398-9547448)
chr2 (1025-1074)||(29544649-29544699)
chr2 (1033-1074)||(2256993-2257034)
chr2 (1033-1074)||(12413515-12413556)
chr2 (1033-1074)||(12425575-12425616)
chr2 (1026-1074)||(25186232-25186281)
chr2 (1025-1069)||(27848185-27848230)
chr2 (1025-1069)||(29896283-29896328)
chr2 (1033-1074)||(31815885-31815926)
chr2 (1033-1074)||(41859874-41859915)
chr2 (1033-1074)||(42791317-42791358)
chr2 (1025-1069)||(5676766-5676810)
chr2 (1033-1069)||(10723966-10724002)
chr2 (1033-1069)||(15447712-15447748)
chr2 (1034-1074)||(20565074-20565114)
chr2 (1034-1074)||(43117189-43117229)
chr2 (1035-1074)||(3904224-3904263)
chr2 (1034-1069)||(31543039-31543074)
chr2 (585-623)||(5133712-5133749)
chr2 (1035-1069)||(27152380-27152414)
chr2 (1036-1074)||(36359336-36359374)
chr2 (1025-1066)||(44810735-44810777)
chr2 (1033-1074)||(660820-660861)
chr2 (1033-1074)||(4122011-4122052)
chr2 (1033-1074)||(5028878-5028919)
chr2 (1037-1074)||(8091160-8091197)
chr2 (1033-1074)||(8781648-8781689)
chr2 (1037-1074)||(11175807-11175844)
chr2 (1033-1066)||(12599863-12599896)
chr2 (1036-1069)||(18611964-18611997)
chr2 (1033-1074)||(24393267-24393308)
chr2 (1033-1074)||(27244679-27244720)
chr2 (1033-1074)||(29734713-29734754)
chr2 (1036-1069)||(30978389-30978422)
chr2 (589-630)||(31461382-31461422)
[»] chr1 (37 HSPs)
chr1 (1024-1069)||(3481588-3481634)
chr1 (1038-1074)||(7610172-7610208)
chr1 (1025-1069)||(10356704-10356748)
chr1 (1033-1069)||(11681250-11681286)
chr1 (585-629)||(23895276-23895319)
chr1 (1025-1074)||(42045361-42045411)
chr1 (1037-1074)||(16033452-16033489)
chr1 (1033-1074)||(16307671-16307712)
chr1 (1033-1074)||(22335380-22335421)
chr1 (1033-1074)||(25532995-25533036)
chr1 (1026-1074)||(33020033-33020082)
chr1 (1033-1069)||(12268982-12269018)
chr1 (1025-1069)||(29251781-29251825)
chr1 (1033-1068)||(5280659-5280694)
chr1 (585-628)||(17423026-17423069)
chr1 (1024-1066)||(24571613-24571656)
chr1 (585-628)||(50319232-50319274)
chr1 (1036-1074)||(10132445-10132483)
chr1 (1025-1074)||(17139506-17139556)
chr1 (1025-1074)||(27533265-27533315)
chr1 (1035-1069)||(32497481-32497515)
chr1 (1025-1074)||(32944758-32944808)
chr1 (1036-1074)||(34521191-34521229)
chr1 (1033-1074)||(2994780-2994821)
chr1 (1033-1074)||(5907821-5907862)
chr1 (1033-1074)||(6000141-6000182)
chr1 (1033-1074)||(8094063-8094104)
chr1 (1033-1066)||(8269366-8269399)
chr1 (1033-1074)||(8736457-8736498)
chr1 (1033-1070)||(11354016-11354053)
chr1 (1033-1074)||(14880850-14880891)
chr1 (1025-1074)||(21400013-21400062)
chr1 (1036-1069)||(34595899-34595932)
chr1 (585-630)||(36151591-36151635)
chr1 (1033-1074)||(41973277-41973318)
chr1 (1033-1074)||(44860881-44860922)
chr1 (1035-1068)||(46335059-46335092)
[»] chr7 (46 HSPs)
chr7 (1024-1068)||(5579721-5579766)
chr7 (1026-1074)||(10244749-10244797)
chr7 (1025-1069)||(3671851-3671896)
chr7 (1037-1074)||(5041361-5041398)
chr7 (1033-1074)||(18714470-18714511)
chr7 (1033-1074)||(19599167-19599208)
chr7 (585-630)||(24973884-24973928)
chr7 (1033-1074)||(27462434-27462475)
chr7 (585-630)||(49060480-49060524)
chr7 (1034-1074)||(35222946-35222986)
chr7 (1035-1074)||(6384873-6384912)
chr7 (1035-1074)||(7872748-7872787)
chr7 (1034-1069)||(20085758-20085793)
chr7 (1031-1066)||(21286380-21286415)
chr7 (1038-1069)||(37230031-37230062)
chr7 (583-629)||(5006596-5006641)
chr7 (1025-1066)||(7994873-7994915)
chr7 (1025-1074)||(10026016-10026066)
chr7 (1036-1066)||(16577861-16577891)
chr7 (1036-1066)||(16587771-16587801)
chr7 (1025-1074)||(19416536-19416586)
chr7 (1025-1074)||(27833390-27833440)
chr7 (1025-1074)||(31038511-31038561)
chr7 (1038-1072)||(32311422-32311456)
chr7 (1036-1074)||(42095944-42095982)
chr7 (1033-1074)||(2916124-2916165)
chr7 (1026-1074)||(3830090-3830139)
chr7 (1036-1069)||(5458072-5458105)
chr7 (1036-1069)||(7670461-7670494)
chr7 (1037-1074)||(11908980-11909017)
chr7 (1036-1069)||(16537537-16537570)
chr7 (1036-1069)||(16628092-16628125)
chr7 (1033-1074)||(19036100-19036141)
chr7 (1036-1069)||(19578138-19578171)
chr7 (1037-1074)||(19626527-19626564)
chr7 (1033-1074)||(20718495-20718536)
chr7 (586-623)||(28178910-28178946)
chr7 (1036-1069)||(31281766-31281799)
chr7 (585-622)||(33894563-33894599)
chr7 (585-630)||(35536047-35536091)
chr7 (1033-1074)||(40187634-40187675)
chr7 (589-630)||(42656459-42656499)
chr7 (1029-1074)||(43680984-43681029)
chr7 (1037-1074)||(46737807-46737844)
chr7 (1033-1074)||(46987108-46987149)
chr7 (1033-1074)||(48629063-48629104)
[»] chr6 (27 HSPs)
chr6 (1033-1074)||(20744160-20744201)
chr6 (1033-1067)||(4455594-4455628)
chr6 (1035-1069)||(9977084-9977118)
chr6 (1033-1074)||(8569731-8569772)
chr6 (1033-1074)||(14918298-14918339)
chr6 (1036-1069)||(15155762-15155795)
chr6 (1025-1069)||(27907940-27907985)
chr6 (1025-1069)||(10496961-10497005)
chr6 (1026-1069)||(24373700-24373744)
chr6 (1035-1067)||(27834368-27834400)
chr6 (1034-1069)||(291394-291429)
chr6 (743-782)||(1231216-1231255)
chr6 (1034-1069)||(12808896-12808931)
chr6 (1025-1074)||(7082981-7083031)
chr6 (1036-1066)||(17151266-17151296)
chr6 (1036-1074)||(33824903-33824941)
chr6 (1033-1074)||(2726415-2726456)
chr6 (1036-1069)||(8138459-8138492)
chr6 (1033-1074)||(9367423-9367464)
chr6 (1037-1066)||(10507530-10507559)
chr6 (1036-1065)||(12440694-12440723)
chr6 (1033-1074)||(12582227-12582268)
chr6 (585-630)||(24836285-24836329)
chr6 (707-768)||(27857436-27857497)
chr6 (585-630)||(29274315-29274359)
chr6 (1033-1074)||(29740504-29740545)
chr6 (1033-1074)||(33976266-33976307)
[»] chr8 (34 HSPs)
chr8 (1026-1066)||(36428685-36428725)
chr8 (1035-1074)||(39821906-39821945)
chr8 (1033-1067)||(7996969-7997003)
chr8 (706-780)||(10075472-10075546)
chr8 (1025-1074)||(12748923-12748973)
chr8 (1025-1074)||(32051521-32051571)
chr8 (1033-1074)||(26773800-26773841)
chr8 (1033-1074)||(30623315-30623356)
chr8 (1033-1069)||(28439986-28440022)
chr8 (1033-1069)||(30176417-30176453)
chr8 (1033-1069)||(31336805-31336841)
chr8 (1035-1066)||(27426263-27426294)
chr8 (1034-1069)||(33105418-33105453)
chr8 (1035-1074)||(38763515-38763554)
chr8 (1025-1066)||(12800889-12800931)
chr8 (1025-1074)||(24838159-24838209)
chr8 (585-623)||(26215436-26215473)
chr8 (585-623)||(26813897-26813935)
chr8 (1025-1074)||(27587243-27587293)
chr8 (1035-1065)||(29546924-29546954)
chr8 (1027-1065)||(32421600-32421638)
chr8 (1032-1074)||(32944947-32944989)
chr8 (1035-1069)||(41603088-41603122)
chr8 (585-623)||(42597341-42597378)
chr8 (1033-1074)||(444435-444476)
chr8 (1033-1074)||(1244703-1244744)
chr8 (1033-1074)||(6235549-6235590)
chr8 (1033-1074)||(7869639-7869680)
chr8 (1033-1074)||(8881297-8881338)
chr8 (585-630)||(14482142-14482186)
chr8 (1033-1074)||(19163534-19163575)
chr8 (1025-1069)||(19260568-19260613)
chr8 (1033-1074)||(29376923-29376964)
chr8 (1033-1074)||(32944838-32944879)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1026-1074)||(15920-15969)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1033-1074)||(53378-53419)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1037-1074)||(99059-99096)
[»] scaffold0590 (1 HSPs)
scaffold0590 (585-629)||(1161-1204)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1034-1074)||(5204-5244)
[»] scaffold0275 (1 HSPs)
scaffold0275 (585-629)||(2771-2814)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1038-1074)||(42337-42373)
[»] scaffold1127 (1 HSPs)
scaffold1127 (1034-1069)||(1164-1199)
[»] scaffold1149 (1 HSPs)
scaffold1149 (1036-1074)||(2354-2392)
[»] scaffold0743 (1 HSPs)
scaffold0743 (1025-1074)||(1408-1458)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1028-1074)||(52400-52446)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1040-1069)||(122918-122947)


Alignment Details
Target: chr3 (Bit Score: 669; Significance: 0; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 669; E-Value: 0
Query Start/End: Original strand, 17 - 754
Target Start/End: Original strand, 30665723 - 30666466
Alignment:
Q  17 cagacaccaatacggtcttctcttgtaggagcccagtagaatttctccatacgaccatcacggatgagaggagcataaagtgttgagaaatcattaccgg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30665723 cagacaccaatacggtcttctcttgtaggagcccagtagaatttctccatacgaccatcacggatgagaggagcataaagtgttgagaaatcgttaccgg 30665822  T
Q  117 tgacaatgatgggcacacgagcgttatcttccttgttgtacataccagggagttggacattggtggggttatcagcaatgttcatgagtgtggcattcac 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30665823 tgacaatgatgggcacacgagcgttatcttccttgttgtacataccagggagttggacattggtggggttatcagcaatgttcatgagtgtggcattcac 30665922  T
Q  217 catctggttgttgacagtgtattgtgtggttccacccatacgacctgctcctgcatcgagatcgttgatgaacagacaacacatctttcccttcctgata 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30665923 catctggttgttgacagtgtattgtgtggttccacccatacgacctgctcctgcatcgagatcgttgatgaacagacaacacatctttcccttcctgata 30666022  T
Q  317 atgtcagcggcttcacggtatctctgtctgatcagttttgctggctctcctgcatttccactttcaagctctccagcactcatcatgatggggctgtaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30666023 atgtcagcggcttcacggtatctctgtctgatcagttttgctggctctcctgcatttccactttcaagctctccagcactcatcatgatggggctgtaac 30666122  T
Q  417 acaatttcaacatcaaattagttagaagattatgtagcacaacatatgctatatactgagcatatttggaagagcttctttggtcttgcttcatgaaata 516  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30666123 acaatttcaacatcaaattatgtagaagattatgtagcacaacatatgctatatactgagcatatttggaagagcttctttggtcttgcttcatgaaata 30666222  T
Q  517 agcacttgaattaggccatgtttgcacaataagtttattaagaccttatagcataaacgttgatcgtatatgtataagctatttctataacaaaaagata 616  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30666223 agcacttgaattaggccatgtttgcacaataagtttattaagaccttatagcataaacattgatcgtatatgtataagctatttctataacaaaaagata 30666322  T
Q  617 aaataaattcaaataagccataaactgcttttgtacgctatcttgcagtgcttatcg------nnnnnnnngacaacatcttatagacatcgtttatttt 710  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||              |||||||||||||||||||||||||||||    
T  30666323 aaataaattcaaataagccataaactgcttttgtacgctatcttggagtgcttatcggaaagaaaaaaaaagacaacatcttatagacatcgtttatttt 30666422  T
Q  711 cataagctctcctaaatagtctcgcaagcatatatgtcaataga 754  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  30666423 cataagctctcctaaatagtctcgcaagcgtatacgtcaataga 30666466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 25441498 - 25441539
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  25441498 cggggtttgaaccccagaccttgcatatattatgcattgtcc 25441539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 52904133 - 52904182
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  52904133 ggtggtggcggggtttgaacccccgacattgcatatattatgcattgtcc 52904182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 584 - 630
Target Start/End: Original strand, 1395610 - 1395655
Alignment:
Q  584 atatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  1395610 atatgtataagctatttctataac-aaaagataaaataaagtcaaat 1395655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 38130948 - 38130998
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  38130948 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 38130998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Original strand, 1111839 - 1111872
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||||||||||||||||||||||    
T  1111839 cggggtttgaaccccagaccttgcatatattatg 1111872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Complemental strand, 8238623 - 8238586
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8238623 gtttgaaccccagaccttgcatatattatgcattgtcc 8238586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 25505691 - 25505740
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||| ||||    
T  25505691 ggtggtgtccgggttcgaaccccagaccttgcatatattatgcattgtcc 25505740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 32843260 - 32843301
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  32843260 cggggtttgaaccccagaccttgcatattttatgcattgtcc 32843301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 34899160 - 34899119
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  34899160 cggggtttgaaccccggaccttgcatatattatgcattgtcc 34899119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 35347296 - 35347329
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||||||||||||||||||||    
T  35347296 ggtttgaaccccagaccttgcatatattatgcat 35347329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 49975807 - 49975844
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  49975807 gtttgaaccccagaccttgcatatattatgcattgtcc 49975844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Complemental strand, 8075848 - 8075812
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8075848 cggggtttgaacctcagaccttgcatatattatgcat 8075812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Original strand, 13829076 - 13829116
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  13829076 ggggttcgaaccccagaccttgcatatattatgcattgtcc 13829116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 20612275 - 20612311
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20612275 cggggtttgaaccccaaaccttgcatatattatgcat 20612311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Complemental strand, 33745161 - 33745121
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  33745161 ggggtttgaaccccagaccttgcatattttatgcattgtcc 33745121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Original strand, 35191816 - 35191856
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  35191816 ggggttcgaaccccagaccttgcatatattatgcattgtcc 35191856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 48849761 - 48849797
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||| |||||||||||||||||||||    
T  48849761 cggggtttgaaccccggaccttgcatatattatgcat 48849797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Original strand, 52172778 - 52172826
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  52172778 gtggtggcgcggtttgaactccagatcttgcatatattatgcattgtcc 52172826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1043 - 1074
Target Start/End: Original strand, 1743934 - 1743965
Alignment:
Q  1043 accccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||    
T  1743934 accccagaccttgcatatattatgcatcgtcc 1743965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Original strand, 2153501 - 2153540
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  2153501 gggtttaaaccccagaccttgcatatattatgcattgtcc 2153540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1026 - 1069
Target Start/End: Complemental strand, 21160122 - 21160079
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||    
T  21160122 gtggtggtggggtttgaacccccgaccttacatatattatgcat 21160079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1024 - 1074
Target Start/End: Original strand, 25727955 - 25728006
Alignment:
Q  1024 gggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  25727955 gggtggtggtcgggatttgaaccccggaccttgcatatattatgcattgtcc 25728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Complemental strand, 41817560 - 41817521
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  41817560 gggtttgaaccccggaccttgcatatattatgcattgtcc 41817521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Complemental strand, 45432009 - 45431970
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  45432009 gggtttgaaccccggaccttgcatatattatgcattgtcc 45431970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1033 - 1068
Target Start/End: Original strand, 45885475 - 45885510
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgca 1068  Q
    ||||||||||||| ||||||||||||||||||||||    
T  45885475 cggggtttgaacctcagaccttgcatatattatgca 45885510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Complemental strand, 2128381 - 2128344
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2128381 tatgtataagctatttctataac-aaaagataaaataaa 2128344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 4601916 - 4601866
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||| ||||    
T  4601916 ggtggtggccggggtttgaaccccggaccttgcatttattatgcattgtcc 4601866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Original strand, 16663236 - 16663270
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||| |||||||||||||||||||||    
T  16663236 gggtttgaaccccggaccttgcatatattatgcat 16663270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Complemental strand, 20018257 - 20018219
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  20018257 ggtttgaaccccagaccttgcatattttatgcattgtcc 20018219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Complemental strand, 21245853 - 21245815
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  21245853 ggtttgaaccccagaccttacatatattatgcattgtcc 21245815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 25340913 - 25340963
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||| ||||    
T  25340913 ggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtcc 25340963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1066
Target Start/End: Complemental strand, 27185537 - 27185507
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||||||||||||    
T  27185537 ggtttgaaccccagaccttgcatatattatg 27185507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1066
Target Start/End: Original strand, 35863814 - 35863844
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||||||||||||    
T  35863814 ggtttgaaccccagaccttgcatatattatg 35863844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 581 - 631
Target Start/End: Complemental strand, 45535416 - 45535367
Alignment:
Q  581 cgtatatgtataagctatttctataacaaaaagataaaataaattcaaata 631  Q
    |||||||||| ||||||||||||||||||||| ||||| |||| |||||||    
T  45535416 cgtatatgtagaagctatttctataacaaaaa-ataaattaaagtcaaata 45535367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Complemental strand, 53208031 - 53207997
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||| |||||||||||||||||||||||||||||    
T  53208031 gggttcgaaccccagaccttgcatatattatgcat 53207997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 913601 - 913634
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| |||||||||||||||||||||    
T  913601 ggtttgaaccccggaccttgcatatattatgcat 913634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Original strand, 2186425 - 2186458
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||| |||||||||||    
T  2186425 cggggtttgaaccccagaccttacatatattatg 2186458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 7464489 - 7464530
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| |||||| |||||||||||||| ||||    
T  7464489 cggggtttgaaccccggaccttacatatattatgcattgtcc 7464530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 8136630 - 8136671
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||   ||||||||||||||||||||||||||    
T  8136630 cggggtttgaaccttggaccttgcatatattatgcatcgtcc 8136671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 10922306 - 10922347
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| || |||||||||||||||||| ||||    
T  10922306 cggggtttgaaccccggatcttgcatatattatgcattgtcc 10922347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 743 - 784
Target Start/End: Original strand, 40294796 - 40294837
Alignment:
Q  743 tatgtcaatagataaactcaaataaatgaatcaaaacatgtc 784  Q
    |||||||||| |||||||||||||||| |||| |||||||||    
T  40294796 tatgtcaataaataaactcaaataaatcaatctaaacatgtc 40294837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 48656900 - 48656933
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| |||||||||||||||||||||    
T  48656900 ggtttgaaccccggaccttgcatatattatgcat 48656933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1041 - 1074
Target Start/End: Complemental strand, 53996354 - 53996321
Alignment:
Q  1041 gaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||| ||||    
T  53996354 gaaccccagaccttgcatatattatgcattgtcc 53996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 54230097 - 54230138
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| |||||||| |||||||||||||||||||| ||||    
T  54230097 cggggttcgaaccccaaaccttgcatatattatgcattgtcc 54230138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Original strand, 55066589 - 55066634
Alignment:
Q  1025 ggtggtggcgggg-tttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  55066589 ggtggtggccgggatttgaaccccagaccatgcatatattatgcat 55066634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 3e-97; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 20 - 412
Target Start/End: Original strand, 34435088 - 34435480
Alignment:
Q  20 acaccaatacggtcttctcttgtaggagcccagtagaatttctccatacgaccatcacggatgagaggagcataaagtgttgagaaatcattaccggtga 119  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||||| || |    
T  34435088 acaccaatacgatcttctcttgtaggtgcccaatagaatttctccatacgaccgtcacgaataagaggagcatacaatgttgaaaaatcattaccagtaa 34435187  T
Q  120 caatgatgggcacacgagcgttatcttccttgttgtacataccagggagttggacattggtggggttatcagcaatgttcatgagtgtggcattcaccat 219  Q
    ||||||| |||||||| || || ||||| ||||| ||||||||||| ||||| ||||| || |||||||||||||||||||| ||||| ||||| |||||    
T  34435188 caatgataggcacacgtgcattctcttctttgttatacataccaggaagttgaacatttgttgggttatcagcaatgttcataagtgttgcatttaccat 34435287  T
Q  220 ctggttgttgacagtgtattgtgtggttccacccatacgacctgctcctgcatcgagatcgttgatgaacagacaacacatctttcccttcctgataatg 319  Q
     || ||||| || ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| || || || || || |||    
T  34435288 ttgattgttcactgtgtactgtgttgttccacccatacgaccggctcctgcatcaagatcgtttatgaagagacaacacattttcccttttcttattatg 34435387  T
Q  320 tcagcggcttcacggtatctctgtctgatcagttttgctggctctcctgcatttccactttcaagctctccagcactcatcatgatggggctg 412  Q
    || |  ||||| | |||||| ||||  || ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  34435388 tctgatgcttctctgtatctttgtcgaattagttttgctggttctcccgcatttccactttctagctctccagcactcatcatgatagggctg 34435480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 24408558 - 24408517
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24408558 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 24408517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 6489079 - 6489029
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  6489079 ggtggtggccggggtttgaaccccagaccttgcatatattatgcattgtcc 6489029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1026 - 1069
Target Start/End: Original strand, 21139139 - 21139182
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||| |||||||||| |||||||||||||||||||||    
T  21139139 gtggtggcgggttttgaaccccggaccttgcatatattatgcat 21139182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 15889483 - 15889433
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  15889483 ggtggtggtcggggtttgaaccctagaccttgcatatattatgcattgtcc 15889433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 22522790 - 22522840
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  22522790 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 22522840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 5846092 - 5846051
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  5846092 cggggtttgaaccccagactttgcatatattatgcattgtcc 5846051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 40715947 - 40715988
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  40715947 cggggtttgaaccccggaccttgcatatattatgcattgtcc 40715988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1073
Target Start/End: Original strand, 979823 - 979863
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtc 1073  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  979823 cggggtttgaaccctagacgttgcatatattatgcatcgtc 979863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 629
Target Start/End: Complemental strand, 7096257 - 7096214
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaa 629  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  7096257 tatgtataagctatttctataac-aaaagataaaataaagtcaaa 7096214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1026 - 1069
Target Start/End: Original strand, 9893661 - 9893705
Alignment:
Q  1026 gtggtggc-ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  9893661 gtggtggctggggtttgaaccccagaccttgcatattttatgcat 9893705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1026 - 1066
Target Start/End: Complemental strand, 12190062 - 12190022
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  12190062 gtggtggcggggtttgaacccccgaccttacatatattatg 12190022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 587 - 631
Target Start/End: Complemental strand, 12595579 - 12595536
Alignment:
Q  587 tgtataagctatttctataacaaaaagataaaataaattcaaata 631  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  12595579 tgtataagctatttctatagcaaaa-gataaaataaattcaaata 12595536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Original strand, 37614331 - 37614379
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||| ||||    
T  37614331 gtggtggctgggttcgaatcccagaccttgcatatattatgcattgtcc 37614379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1026 - 1069
Target Start/End: Complemental strand, 5614835 - 5614792
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||    
T  5614835 gtggtggtggggtttgaacccccgaccttacatatattatgcat 5614792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1031 - 1074
Target Start/End: Complemental strand, 34436916 - 34436873
Alignment:
Q  1031 ggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||    
T  34436916 ggcggggtttgaaccccggcccttgcatatattatgcattgtcc 34436873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 6624848 - 6624798
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  6624848 ggtggtggccggggttcgaaccccggaccttgcatatattatgcattgtcc 6624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 11720965 - 11720916
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  11720965 ggtggtggccggggtttgaacccc-gaccttgcatatattatgcattgtcc 11720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Complemental strand, 12407791 - 12407754
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12407791 tatgtataagctatttctataac-aaaagataaaataaa 12407754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Original strand, 13224369 - 13224406
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  13224369 tatgtataagctatttctataac-aaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Original strand, 17465396 - 17465434
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  17465396 ggttcgaaccccagaccttgcatatattatgcatagtcc 17465434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Original strand, 33014245 - 33014283
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  33014245 ggtttgaaccccagacctttcatatattatgcattgtcc 33014283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Complemental strand, 3389221 - 3389184
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  3389221 gtttgaaccccagatcttgcatatattatgcattgtcc 3389184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Complemental strand, 10706022 - 10705989
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||||||||| |||||    
T  10706022 cggggtttgaaccccagaccttgcatattttatg 10705989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 622
Target Start/End: Complemental strand, 12460130 - 12460094
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataa 622  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  12460130 tatgtataagctatttctataac-aaaagataaaataa 12460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Complemental strand, 13864407 - 13864374
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||| ||||||||||||||||||    
T  13864407 cggggtttgaaccccggaccttgcatatattatg 13864374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Complemental strand, 20721113 - 20721080
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||| ||||||||||||||||||    
T  20721113 cggggtttgaaccccggaccttgcatatattatg 20721080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 31708147 - 31708180
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||| |||||||||||||||||||||||||||||    
T  31708147 ggttcgaaccccagaccttgcatatattatgcat 31708180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 32200445 - 32200486
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||    
T  32200445 cggggcttgaaccccggaccttgcatatattatgcattgtcc 32200486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1035 - 1068
Target Start/End: Complemental strand, 32229125 - 32229092
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgca 1068  Q
    ||||||||||||||||| ||||||||||||||||    
T  32229125 gggtttgaaccccagacattgcatatattatgca 32229092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 34191496 - 34191455
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| |||||||||||| |||||||| ||||    
T  34191496 cggggtttgaaccccggaccttgcatattttatgcattgtcc 34191455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 630
Target Start/End: Original strand, 39128579 - 39128623
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  39128579 tatgtataagctaattctataac-aaaagataaaataaagtcaaat 39128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Complemental strand, 42473954 - 42473921
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| |||||||||||||||||||||    
T  42473954 ggtttgaaccccggaccttgcatatattatgcat 42473921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 8e-70; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 41 - 411
Target Start/End: Original strand, 6853480 - 6853850
Alignment:
Q  41 gtaggagcccagtagaatttctccatacgaccatcacggatgagaggagcataaagtgttgagaaatcattaccggtgacaatgatgggcacacgagcgt 140  Q
    ||||| |||||||||||||| |||||||| |||||||| || | ||||||||| |  || ||||| ||||| || ||||| ||||| || || || || |    
T  6853480 gtaggtgcccagtagaatttttccatacgtccatcacgaattaaaggagcatacaacgtagagaagtcattgccagtgacgatgatagggacgcgggcat 6853579  T
Q  141 tatcttccttgttgtacataccagggagttggacattggtggggttatcagcaatgttcatgagtgtggcattcaccatctggttgttgacagtgtattg 240  Q
    | ||||| |||||||||||||| || ||||| |||||||| ||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||    
T  6853580 tctcttctttgttgtacataccgggaagttgaacattggtagggttgtcagcaatgttcatgagggttgcatttaccatctggttgttgactgtgtattg 6853679  T
Q  241 tgtggttccacccatacgacctgctcctgcatcgagatcgttgatgaacagacaacacatctttcccttcctgataatgtcagcggcttcacggtatctc 340  Q
     || || |||||||| | ||| ||||||||||| ||||| |||||||| ||||| ||||||||||| || ||||||||||| |  || |||||||| ||     
T  6853680 agtagtgccacccattctaccagctcctgcatcaagatcattgatgaagagacagcacatctttccttttctgataatgtcggacgcctcacggtacctt 6853779  T
Q  341 tgtctgatcagttttgctggctctcctgcatttccactttcaagctctccagcactcatcatgatggggct 411  Q
    || || ||||  ||||| ||||||||||||||||||||||| |  ||||| ||||||||||| || |||||    
T  6853780 tgcctaatcaactttgcaggctctcctgcatttccactttccaattctccggcactcatcattatagggct 6853850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 590 - 630
Target Start/End: Complemental strand, 24371079 - 24371039
Alignment:
Q  590 ataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  24371079 ataagctatttctataaccaaaagataaaataaattcaaat 24371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1034 - 1069
Target Start/End: Complemental strand, 6087809 - 6087774
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||||||||||||||||||||||    
T  6087809 ggggtttgaaccccagaccttgcatatattatgcat 6087774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1033 - 1068
Target Start/End: Complemental strand, 17729489 - 17729454
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgca 1068  Q
    ||||||||||||||||||||||||||||||||||||    
T  17729489 cggggtttgaaccccagaccttgcatatattatgca 17729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1028 - 1074
Target Start/End: Original strand, 1753345 - 1753391
Alignment:
Q  1028 ggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||    
T  1753345 ggtggcggggtttgaacccccgaccttgcatatgttatgcattgtcc 1753391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 43034331 - 43034381
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  43034331 ggtggtggccggggtttgaacctcagaccttgcatatattatgcattgtcc 43034381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1031 - 1069
Target Start/End: Complemental strand, 44816006 - 44815968
Alignment:
Q  1031 ggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  44816006 ggcggggtttgaaccccggaccttgcatatattatgcat 44815968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Complemental strand, 10035328 - 10035295
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||||||||||||||||||||||    
T  10035328 cggggtttgaaccccagaccttgcatatattatg 10035295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 11949761 - 11949802
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  11949761 cggggtttgaaccccggaccttgcatatattatgcattgtcc 11949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 16431679 - 16431638
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  16431679 cggggtttgaaccccagaccttgcatattttatgcattgtcc 16431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 21318251 - 21318292
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  21318251 cggggtttgaaccctagaccttgcatatattatgcattgtcc 21318292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 38375020 - 38374979
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  38375020 cggggtttgaactccagaccttgcatatattatgcattgtcc 38374979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 47806254 - 47806295
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  47806254 cggggttcgaaccccagaccttgcatatattatgcattgtcc 47806295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Complemental strand, 675980 - 675940
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  675980 ggggtttgaaccccggaccttgcatatattatgcattgtcc 675940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1065
Target Start/End: Complemental strand, 6610326 - 6610294
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattat 1065  Q
    |||||||||||||||||||||||||||||||||    
T  6610326 cggggtttgaaccccagaccttgcatatattat 6610294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 19479475 - 19479511
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19479475 cggggtttgaaccccggaccttgcatatattatgcat 19479511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Complemental strand, 20383550 - 20383510
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  20383550 ggggtttgaaccccggaccttgcatatattatgcattgtcc 20383510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 22164267 - 22164303
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22164267 cggggtttgaaccccagaccttacatatattatgcat 22164303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 22630358 - 22630394
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22630358 cggggtttgaacctcagaccttgcatatattatgcat 22630394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 37930845 - 37930881
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37930845 cggggtttgaacctcagaccttgcatatattatgcat 37930881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Original strand, 40901128 - 40901176
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||| |||||||| || ||||||||||||||||||||| ||||    
T  40901128 gtggtggcggagtttgaactcccgaccttgcatatattatgcattgtcc 40901176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 49041979 - 49042015
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49041979 cggggtttgaaccccggaccttgcatatattatgcat 49042015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 629
Target Start/End: Complemental strand, 51044589 - 51044546
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaa 629  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  51044589 tatgtataagctatttctataac-aaaagataaaataaagtcaaa 51044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 629
Target Start/End: Complemental strand, 52645879 - 52645836
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaa 629  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  52645879 tatgtataagctatttctataac-aaaagataaaatcaattcaaa 52645836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 54294420 - 54294456
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54294420 cggggtttgaaccccggaccttgcatatattatgcat 54294456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Original strand, 14542760 - 14542799
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  14542760 gggttcgaaccccagaccttgcatatattatgcattgtcc 14542799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Original strand, 17133780 - 17133819
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  17133780 gggtttaaaccccagacctttcatatattatgcatcgtcc 17133819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Original strand, 20799394 - 20799433
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  20799394 gggtttgaaccccggaccttgcatatattatgcattgtcc 20799433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Complemental strand, 49308881 - 49308842
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  49308881 gggttcgaaccccagaccttgcatatattatgcattgtcc 49308842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1033 - 1072
Target Start/End: Original strand, 50152236 - 50152275
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgt 1072  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  50152236 cggggtttgaaccccgaaccttgcatatattatgcatcgt 50152275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Original strand, 6364089 - 6364126
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6364089 tatgtataagctatttctataac-aaaagataaaataaa 6364126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Complemental strand, 7230340 - 7230302
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  7230340 ggtttgaaccccggaccttgcatatattatgcattgtcc 7230302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 9946499 - 9946449
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||| ||||    
T  9946499 ggtggtggtcggggtttgaaccccggaccttgcatattttatgcattgtcc 9946449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1033 - 1067
Target Start/End: Complemental strand, 11198391 - 11198357
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgc 1067  Q
    ||||||||||||||| |||||||||||||||||||    
T  11198391 cggggtttgaaccccggaccttgcatatattatgc 11198357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Original strand, 18903758 - 18903792
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||| ||||||||||||||    
T  18903758 gggtttgaaccccagaccttacatatattatgcat 18903792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1033 - 1067
Target Start/End: Original strand, 23247596 - 23247630
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgc 1067  Q
    |||||||| ||||||||||||||||||||||||||    
T  23247596 cggggtttaaaccccagaccttgcatatattatgc 23247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Complemental strand, 25487675 - 25487638
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  25487675 tatgtataagctatttctataacaaaaa-ataaaataaa 25487638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 28435237 - 28435287
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||| ||||    
T  28435237 ggtggtggctggggtttgaaccccgaaccttgcatatattatgcattgtcc 28435287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Complemental strand, 39974562 - 39974524
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  39974562 ggtttgaaccccagaccttccatatattatgcattgtcc 39974524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Original strand, 54859709 - 54859743
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| ||||||||||||||||||||||    
T  54859709 gggtttgaacccaagaccttgcatatattatgcat 54859743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 56497597 - 56497647
Alignment:
Q  1025 ggtggtggcggggttt-gaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||| ||||    
T  56497597 ggtggtggccgggattcgaaccccagaccttgcatatattatgcattgtcc 56497647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1073
Target Start/End: Original strand, 2434459 - 2434496
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtc 1073  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  2434459 ggtttgaacccctgaccttgcatatagtatgcatcgtc 2434496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1029 - 1074
Target Start/End: Complemental strand, 7248403 - 7248358
Alignment:
Q  1029 gtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| |||||||||||| ||||||||||||| |||||||| ||||    
T  7248403 gtggccgggtttgaaccctagaccttgcatattttatgcattgtcc 7248358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1041 - 1074
Target Start/End: Complemental strand, 12698652 - 12698619
Alignment:
Q  1041 gaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||| ||||    
T  12698652 gaaccccagaccttgcatatattatgcattgtcc 12698619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 13121607 - 13121566
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||  ||||||||||||||||||||||| ||||    
T  13121607 cggggtttgaacttcagaccttgcatatattatgcattgtcc 13121566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 21114303 - 21114344
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| |||||||||||||| |||||| ||||    
T  21114303 cggggtttgaaccccggaccttgcatatatcatgcattgtcc 21114344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 21317339 - 21317372
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| |||||||||||||||||||||    
T  21317339 ggtttgaacccctgaccttgcatatattatgcat 21317372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 24785460 - 24785501
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  24785460 cggggttcgaaccccagaccttgtatatattatgcattgtcc 24785501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 24822806 - 24822765
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  24822806 cggggttcgaaccccagaccttgtatatattatgcattgtcc 24822765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 25783451 - 25783488
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  25783451 gtttgaaccccggaccttgcatatattatgcattgtcc 25783488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 37921809 - 37921768
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||    
T  37921809 cggggtttgaatcccggaccttgcatatattatgcattgtcc 37921768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 43782306 - 43782339
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||| |||||||||||||||||||||||    
T  43782306 ggtttgaaccgcagaccttgcatatattatgcat 43782339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 47015570 - 47015607
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  47015570 gtttgaaccccagaccttgtatatattatgcattgtcc 47015607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Original strand, 47814249 - 47814282
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||| ||||||||||||||||||    
T  47814249 cggggtttgaaccccggaccttgcatatattatg 47814282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 48226496 - 48226537
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||| ||||||||||||||||||||||| |||||||| ||||    
T  48226496 cgggatttgaaccccagaccttgcatattttatgcattgtcc 48226537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 49953405 - 49953442
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  49953405 gtttgaaccccggaccttgcatatattatgcattgtcc 49953442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 52132300 - 52132341
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||    
T  52132300 cggggttcgaaccacagaccttgcatatattatgcattgtcc 52132341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Original strand, 54857604 - 54857649
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||    
T  54857604 ggtggtggccggggtttgaaccccggaccttgcatattttatgcat 54857649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 56551590 - 56551631
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| | ||||||||||||||||||||| ||||    
T  56551590 cggggtttgaacctcggaccttgcatatattatgcattgtcc 56551631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000002; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 10735820 - 10735870
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  10735820 ggtggtggccggggtttgaaccccggaccttgcatatattatgcatcgtcc 10735870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 24592835 - 24592885
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  24592835 ggtggtggccggggtttgaaccccagaccttgcatatattatgcattgtcc 24592885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Original strand, 23407018 - 23407057
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  23407018 gggtttgaaccccagaccttgcatatattatgcattgtcc 23407057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 9547398 - 9547448
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  9547398 ggtggtggtcggggtttgaaccccaaaccttgcatatattatgcattgtcc 9547448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 29544699 - 29544649
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  29544699 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 29544649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 2257034 - 2256993
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  2257034 cggggttcgaaccccagaccttgcatatattatgcattgtcc 2256993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 12413556 - 12413515
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  12413556 cggggtttgaacctcagaccttgcatatattatgcattgtcc 12413515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 12425616 - 12425575
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  12425616 cggggtttgaacctcagaccttgcatatattatgcattgtcc 12425575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Original strand, 25186232 - 25186281
Alignment:
Q  1026 gtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  25186232 gtggtggctggggtttgaaccccggaccttgcatatattatgcattgtcc 25186281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Complemental strand, 27848230 - 27848185
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||    
T  27848230 ggtggtggccggggtttgaaccccggaccttgcatatattatgcat 27848185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Original strand, 29896283 - 29896328
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  29896283 ggtggtggtcggggtttgaaccccaaaccttgcatatattatgcat 29896328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 31815885 - 31815926
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  31815885 cggggtttgaaccccggaccttgcatatattatgcattgtcc 31815926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 41859915 - 41859874
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  41859915 cggggtttgaaccccagaccttgcatattttatgcattgtcc 41859874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 42791358 - 42791317
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  42791358 cggggtttgaaccccggaccttgcatatattatgcattgtcc 42791317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Complemental strand, 5676810 - 5676766
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||||||   |||||||||||||||||||    
T  5676810 ggtggtggcggggtttgaacccccacccttgcatatattatgcat 5676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Complemental strand, 10724002 - 10723966
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10724002 cggggtttgaacctcagaccttgcatatattatgcat 10723966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 15447712 - 15447748
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15447712 cggggtttgaactccagaccttgcatatattatgcat 15447748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Original strand, 20565074 - 20565114
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  20565074 ggggtttgaaccccggaccttgcatatattatgcattgtcc 20565114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Original strand, 43117189 - 43117229
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  43117189 ggggtttgaacctcagaccttgcatatattatgcattgtcc 43117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Complemental strand, 3904263 - 3904224
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  3904263 gggtttgaaccccagaccttacatatattatgcattgtcc 3904224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1034 - 1069
Target Start/End: Complemental strand, 31543074 - 31543039
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||| |||||||||||||||||||||    
T  31543074 ggggtttgaaccccggaccttgcatatattatgcat 31543039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Original strand, 5133712 - 5133749
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5133712 tatgtataagctatttctataac-aaaagataaaataaa 5133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Complemental strand, 27152414 - 27152380
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||| |||||||||||||||||||||||||||||    
T  27152414 gggttcgaaccccagaccttgcatatattatgcat 27152380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Complemental strand, 36359374 - 36359336
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  36359374 ggtttgaaccccggaccttgcatatattatgcattgtcc 36359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1066
Target Start/End: Complemental strand, 44810777 - 44810735
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  44810777 ggtggtggctggggtttgaaccccggaccttgcatatattatg 44810735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 660820 - 660861
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||  ||||||||||||||||||||| ||||    
T  660820 cggggtttgaaccctggaccttgcatatattatgcattgtcc 660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 4122011 - 4122052
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||| ||| |||||||||||||||||||||||||||| ||||    
T  4122011 cgggatttaaaccccagaccttgcatatattatgcattgtcc 4122052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 5028919 - 5028878
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||| ||||| |||||||||||||| ||||    
T  5028919 cggggtttgaaccccaaaccttacatatattatgcattgtcc 5028878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 8091160 - 8091197
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  8091160 gtttgaaccccggaccttgcatatattatgcattgtcc 8091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 8781648 - 8781689
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||    
T  8781648 cggggtttgaaccccggaccttgcatacattatgcattgtcc 8781689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Complemental strand, 11175844 - 11175807
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  11175844 gtttgaaccccagatcttgcatatattatgcattgtcc 11175807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Original strand, 12599863 - 12599896
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||| ||||||||||||||||||||||||||    
T  12599863 cggggttcgaaccccagaccttgcatatattatg 12599896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 18611964 - 18611997
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||| ||||||||||||||||||||    
T  18611964 ggtttgaaccccaaaccttgcatatattatgcat 18611997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 24393308 - 24393267
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||    
T  24393308 cggggttcgaacctcagaccttgcatatattatgcattgtcc 24393267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 27244720 - 27244679
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||| ||||||||| |||||||||||||||||||||| ||||    
T  27244720 cgggctttgaaccctagaccttgcatatattatgcattgtcc 27244679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 29734754 - 29734713
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| | ||||||||||||||||||||| ||||    
T  29734754 cggggtttgaaccacggaccttgcatatattatgcattgtcc 29734713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Complemental strand, 30978422 - 30978389
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| |||||||||||||||||||||    
T  30978422 ggtttgaacccctgaccttgcatatattatgcat 30978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 589 - 630
Target Start/End: Original strand, 31461382 - 31461422
Alignment:
Q  589 tataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  31461382 tataagctatttctataac-aaaagataaaataaagtcaaat 31461422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1024 - 1069
Target Start/End: Complemental strand, 3481634 - 3481588
Alignment:
Q  1024 gggtggtggc-ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  3481634 gggtggtggccggggtttgaaccccagaccttgcatatattatgcat 3481588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1038 - 1074
Target Start/End: Original strand, 7610172 - 7610208
Alignment:
Q  1038 tttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||||||||||||||||||||    
T  7610172 tttgaaccccagaccttgcatatattatgcatcgtcc 7610208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Original strand, 10356704 - 10356748
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  10356704 ggtggtggtcgggtttgaaccccagaccttgcatatattatgcat 10356748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Complemental strand, 11681286 - 11681250
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||||||||||||||||||||    
T  11681286 cggggtttgaaccccagaccttgcatatattatgcat 11681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 585 - 629
Target Start/End: Original strand, 23895276 - 23895319
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaa 629  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  23895276 tatgtataagctatttctataac-aaaagataaaataaattcaaa 23895319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 42045361 - 42045411
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  42045361 ggtggtggccggggtttgaactccagaccttgcatatattatgcattgtcc 42045411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 16033452 - 16033489
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16033452 gtttgaaccccagaccttgcatatattatgcattgtcc 16033489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 16307712 - 16307671
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||| |||||||||||||||||||||||||| ||||    
T  16307712 cggggtttgatccccagaccttgcatatattatgcattgtcc 16307671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 22335421 - 22335380
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  22335421 cggggtttgaacctcagaccttgcatatattatgcattgtcc 22335380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 25533036 - 25532995
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  25533036 cggggtttgaaccccggaccttgcatatattatgcattgtcc 25532995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Original strand, 33020033 - 33020082
Alignment:
Q  1026 gtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  33020033 gtggtggctggggtttgaacctcagaccttgcatatattatgcattgtcc 33020082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 12268982 - 12269018
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||| |||||||||||||||||||||    
T  12268982 cggggtttgaaccccggaccttgcatatattatgcat 12269018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Complemental strand, 29251825 - 29251781
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||    
T  29251825 ggtggtggccgggttcgaacctcagaccttgcatatattatgcat 29251781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1033 - 1068
Target Start/End: Complemental strand, 5280694 - 5280659
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgca 1068  Q
    ||||||| ||||||||||||||||||||||||||||    
T  5280694 cggggttcgaaccccagaccttgcatatattatgca 5280659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 628
Target Start/End: Complemental strand, 17423069 - 17423026
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaa 628  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||    
T  17423069 tatgtataagctttttctataacaaaacgataaaataaagtcaa 17423026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1024 - 1066
Target Start/End: Original strand, 24571613 - 24571656
Alignment:
Q  1024 gggtggtgg-cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||    
T  24571613 gggtggtggtcggagtttgaaccccagaccttgcatatattatg 24571656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 628
Target Start/End: Original strand, 50319232 - 50319274
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaa 628  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  50319232 tatgtataagctatttctataac-aaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Original strand, 10132445 - 10132483
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  10132445 ggttcgaaccccagaccttgcatatattatgcattgtcc 10132483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 17139506 - 17139556
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||    
T  17139506 ggtggtggtcggggtttgaaccccggaccttgaatatattatgcattgtcc 17139556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 27533315 - 27533265
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||||  |||||||||||||||||||| ||||    
T  27533315 ggtggtggtcggggtttgaaccccgaaccttgcatatattatgcattgtcc 27533265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Original strand, 32497481 - 32497515
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| ||||||||||||||||||||||    
T  32497481 gggtttgaaccctagaccttgcatatattatgcat 32497515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 32944808 - 32944758
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||| ||||    
T  32944808 ggtggtggtcggggttcgaaccccagacgttgcatatattatgcattgtcc 32944758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Original strand, 34521191 - 34521229
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  34521191 ggtttgaaccccggaccttgcatatattatgcattgtcc 34521229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 2994821 - 2994780
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||    
T  2994821 cggggtttgaaccccggaccttgcatatattatacattgtcc 2994780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 5907862 - 5907821
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||  ||||||||||||||||||||| ||||    
T  5907862 cggggtttgaaccctggaccttgcatatattatgcattgtcc 5907821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 6000141 - 6000182
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| | ||||||||||||||||||||| ||||    
T  6000141 cggggtttgaacctcggaccttgcatatattatgcattgtcc 6000182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 8094104 - 8094063
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| ||||||  |||||||||||||||||||||||||    
T  8094104 cggggtttaaaccccgcaccttgcatatattatgcatcgtcc 8094063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1066
Target Start/End: Original strand, 8269366 - 8269399
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||| ||||||||||||||||||    
T  8269366 cggggtttgaaccccggaccttgcatatattatg 8269399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 8736498 - 8736457
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| |||||||||||| |||||||| ||||    
T  8736498 cggggtttgaaccccggaccttgcatattttatgcattgtcc 8736457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1070
Target Start/End: Original strand, 11354016 - 11354053
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatc 1070  Q
    |||||||  |||||||||||||||||||||||||||||    
T  11354016 cggggttcaaaccccagaccttgcatatattatgcatc 11354053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 14880891 - 14880850
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||| |||||||| ||||||||||||||||||||||| ||||    
T  14880891 cgggatttgaacctcagaccttgcatatattatgcattgtcc 14880850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 21400013 - 21400062
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| | ||||| |||||| |||||||||||||||||||||| ||||    
T  21400013 ggtggtgtcagggttcgaacccaagaccttgcatatattatgcattgtcc 21400062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Complemental strand, 34595932 - 34595899
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| |||||||||||||||||||||    
T  34595932 ggtttgaaccccggaccttgcatatattatgcat 34595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 630
Target Start/End: Complemental strand, 36151635 - 36151591
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  36151635 tatgtataagctatttcaataac-aaaagataaaataaagtcaaat 36151591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 41973318 - 41973277
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||    
T  41973318 cggggttcgaaccccggaccttgcatatattatgcattgtcc 41973277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 44860881 - 44860922
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||| |||| |||||||| ||||    
T  44860881 cggggtttgaaccccagaccttggatattttatgcattgtcc 44860922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1035 - 1068
Target Start/End: Original strand, 46335059 - 46335092
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgca 1068  Q
    ||||||||||| ||||||||||||||||||||||    
T  46335059 gggtttgaacctcagaccttgcatatattatgca 46335092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000006; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 1024 - 1068
Target Start/End: Complemental strand, 5579766 - 5579721
Alignment:
Q  1024 gggtggtgg-cggggtttgaaccccagaccttgcatatattatgca 1068  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  5579766 gggtggtggtcggggtttgaaccccagaccttgcatatattatgca 5579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Complemental strand, 10244797 - 10244749
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  10244797 gtggtggccgggtttgaaccccggaccttgcatatattatgcattgtcc 10244749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Complemental strand, 3671896 - 3671851
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  3671896 ggtggtggtcggggtttgaactccagaccttgcatatattatgcat 3671851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Complemental strand, 5041398 - 5041361
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5041398 gtttgaaccccagaccttgcatatattatgcattgtcc 5041361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 18714511 - 18714470
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  18714511 cggggtttgaaccccggaccttgcatatattatgcattgtcc 18714470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 19599208 - 19599167
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  19599208 cggggtttgaaccccggaccttgcatatattatgcattgtcc 19599167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 585 - 630
Target Start/End: Original strand, 24973884 - 24973928
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  24973884 tatgtaaaagctatttctataac-aaaagataaaataaattcaaat 24973928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 27462434 - 27462475
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  27462434 cggggtttgaaccccggaccttgcatatattatgcattgtcc 27462475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 585 - 630
Target Start/End: Original strand, 49060480 - 49060524
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||    
T  49060480 tatgtataagctatttctataacaaaaa-ataaaataaagtcaaat 49060524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Complemental strand, 35222986 - 35222946
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  35222986 ggggtttgaaccccagaccttgcatatatcatgcattgtcc 35222946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Complemental strand, 6384912 - 6384873
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  6384912 gggttcgaaccccagaccttgcatatattatgcattgtcc 6384873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Original strand, 7872748 - 7872787
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  7872748 gggttcgaaccccagaccttgcatatattatgcattgtcc 7872787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1034 - 1069
Target Start/End: Original strand, 20085758 - 20085793
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||| |||||||||||||||||||||    
T  20085758 ggggtttgaaccccggaccttgcatatattatgcat 20085793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1031 - 1066
Target Start/End: Complemental strand, 21286415 - 21286380
Alignment:
Q  1031 ggcggggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||| ||||||||||||||||||||||||||    
T  21286415 ggcggggttggaaccccagaccttgcatatattatg 21286380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1038 - 1069
Target Start/End: Original strand, 37230031 - 37230062
Alignment:
Q  1038 tttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||||||||||||||||||    
T  37230031 tttgaaccccagaccttgcatatattatgcat 37230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 583 - 629
Target Start/End: Complemental strand, 5006641 - 5006596
Alignment:
Q  583 tatatgtataagctatttctataacaaaaagataaaataaattcaaa 629  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  5006641 tatatgtataagctattcctataac-aaaagataaaataaagtcaaa 5006596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1066
Target Start/End: Original strand, 7994873 - 7994915
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  7994873 ggtggtggtcggggtttgaaccccagaccttacatatattatg 7994915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 10026066 - 10026016
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||| ||||    
T  10026066 ggtggtggtcggggtttgaaccccataccttgcatattttatgcattgtcc 10026016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1066
Target Start/End: Original strand, 16577861 - 16577891
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||||||||||||    
T  16577861 ggtttgaaccccagaccttgcatatattatg 16577891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1066
Target Start/End: Complemental strand, 16587801 - 16587771
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||||||||||||    
T  16587801 ggtttgaaccccagaccttgcatatattatg 16587771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 19416586 - 19416536
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||| ||||    
T  19416586 ggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtcc 19416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 27833390 - 27833440
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||| ||||    
T  27833390 ggtggtggtcggggtttgaaccccggaccttacatatattatgcattgtcc 27833440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 31038511 - 31038561
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||||||||||||||| | ||||||| ||||    
T  31038511 ggtggtggccggggtttgaaccccagaccttgcatacaatatgcattgtcc 31038561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1038 - 1072
Target Start/End: Original strand, 32311422 - 32311456
Alignment:
Q  1038 tttgaaccccagaccttgcatatattatgcatcgt 1072  Q
    ||||||||||||||||||| |||||||||||||||    
T  32311422 tttgaaccccagaccttgcgtatattatgcatcgt 32311456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Original strand, 42095944 - 42095982
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  42095944 ggtttgaaccccggaccttgcatatattatgcatggtcc 42095982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 2916165 - 2916124
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||    
T  2916165 cggggttcgaatcccagaccttgcatatattatgcattgtcc 2916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Complemental strand, 3830139 - 3830090
Alignment:
Q  1026 gtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||  ||||||||||||||||||||| ||||    
T  3830139 gtggtggctggggtttgaaccctggaccttgcatatattatgcattgtcc 3830090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 5458072 - 5458105
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||| |||||||||||||||||||||||||    
T  5458072 ggtttgaatcccagaccttgcatatattatgcat 5458105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Complemental strand, 7670494 - 7670461
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||| |||||||||||||||||||||    
T  7670494 ggtttgaaccccggaccttgcatatattatgcat 7670461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 11908980 - 11909017
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  11908980 gtttgaacaccagaccttgcatatattatgcattgtcc 11909017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 16537537 - 16537570
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||| |||||||||||||    
T  16537537 ggtttgaaccccagaccttgtatatattatgcat 16537570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Complemental strand, 16628125 - 16628092
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||| |||||||||||||    
T  16628125 ggtttgaaccccagaccttgtatatattatgcat 16628092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 19036100 - 19036141
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  19036100 cggggtttgaactccagaccttgcatattttatgcattgtcc 19036141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 19578138 - 19578171
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||||||||||| ||||||||    
T  19578138 ggtttgaaccccagaccttgcatattttatgcat 19578171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Original strand, 19626527 - 19626564
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  19626527 gtttgaaccccggaccttgcatatattatgcattgtcc 19626564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 20718536 - 20718495
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  20718536 cggggtttgaactccagaccttgcatattttatgcattgtcc 20718495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 586 - 623
Target Start/End: Original strand, 28178910 - 28178946
Alignment:
Q  586 atgtataagctatttctataacaaaaagataaaataaa 623  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28178910 atgtataagctatttctataac-aaaagataaaataaa 28178946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 31281766 - 31281799
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||| |||||||||||||||||||||||||    
T  31281766 ggtttgaatcccagaccttgcatatattatgcat 31281799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 33894563 - 33894599
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataa 622  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  33894563 tatgtataagctatttctataac-aaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 630
Target Start/End: Original strand, 35536047 - 35536091
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||    
T  35536047 tatgtataagctatttctataac-ataagataaaataaagtcaaat 35536091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 40187634 - 40187675
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| |||||||| |||||||||||||| ||||    
T  40187634 cggggtttgaaccgcagaccttacatatattatgcattgtcc 40187675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 589 - 630
Target Start/End: Original strand, 42656459 - 42656499
Alignment:
Q  589 tataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  42656459 tataagctatttctataac-aaaagataaaataaagtcaaat 42656499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1029 - 1074
Target Start/End: Original strand, 43680984 - 43681029
Alignment:
Q  1029 gtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| |||||||||||| ||||||||||||| |||||||| ||||    
T  43680984 gtggccgggtttgaaccctagaccttgcatattttatgcattgtcc 43681029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Complemental strand, 46737844 - 46737807
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  46737844 gtttgaaccccggaccttgcatatattatgcattgtcc 46737807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 46987149 - 46987108
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||    
T  46987149 cggggttcgaaccccggaccttgcatatattatgcattgtcc 46987108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 48629063 - 48629104
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||| ||||||||||||||||||||| ||||    
T  48629063 cggggtttaaaccccggaccttgcatatattatgcattgtcc 48629104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000006; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 20744201 - 20744160
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  20744201 cggggtttgaaccccagaccttgcatatattatgcattgtcc 20744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1033 - 1067
Target Start/End: Original strand, 4455594 - 4455628
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgc 1067  Q
    |||||||||||||||||||||||||||||||||||    
T  4455594 cggggtttgaaccccagaccttgcatatattatgc 4455628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Complemental strand, 9977118 - 9977084
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||||||||||||||||||    
T  9977118 gggtttgaaccccagaccttgcatatattatgcat 9977084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 8569772 - 8569731
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  8569772 cggggtttgaaccccggaccttgcatatattatgcattgtcc 8569731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 14918298 - 14918339
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  14918298 cggggtttgaaccccagaccttgtatatattatgcattgtcc 14918339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Complemental strand, 15155795 - 15155762
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||||||||||||||||||||    
T  15155795 ggtttgaaccccagaccttgcatatattatgcat 15155762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Original strand, 27907940 - 27907985
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  27907940 ggtggtggccggggtttgaaccccagaccttgcatattttatgcat 27907985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Original strand, 10496961 - 10497005
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||| | || ||||||||||||||||||||||||||||||||    
T  10496961 ggtggtgtccggatttgaaccccagaccttgcatatattatgcat 10497005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1026 - 1069
Target Start/End: Original strand, 24373700 - 24373744
Alignment:
Q  1026 gtggtggc-ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  24373700 gtggtggctggggtttgaacccctgaccttgcatatattatgcat 24373744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1035 - 1067
Target Start/End: Complemental strand, 27834400 - 27834368
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgc 1067  Q
    |||||||||||||||||||||||||||||||||    
T  27834400 gggtttgaaccccagaccttgcatatattatgc 27834368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1034 - 1069
Target Start/End: Complemental strand, 291429 - 291394
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||| |||||||||||||||||||||    
T  291429 ggggtttgaaccccggaccttgcatatattatgcat 291394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 782
Target Start/End: Complemental strand, 1231255 - 1231216
Alignment:
Q  743 tatgtcaatagataaactcaaataaatgaatcaaaacatg 782  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  1231255 tatgtcaatagataaactcaaataaatcaatccaaacatg 1231216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1034 - 1069
Target Start/End: Complemental strand, 12808931 - 12808896
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||| |||||||||||||||||||||||||||||    
T  12808931 ggggttcgaaccccagaccttgcatatattatgcat 12808896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 7082981 - 7083031
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  7082981 ggtggtggctggggtttgaactccagatcttgcatatattatgcattgtcc 7083031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1066
Target Start/End: Complemental strand, 17151296 - 17151266
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||||||||||||    
T  17151296 ggtttgaaccccagaccttgcatatattatg 17151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Complemental strand, 33824941 - 33824903
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  33824941 ggtttgaaccccggaccttgcatatattatgcattgtcc 33824903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 2726415 - 2726456
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||    
T  2726415 cggggttcgaaccccggaccttgcatatattatgcattgtcc 2726456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1069
Target Start/End: Original strand, 8138459 - 8138492
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||||| ||||||||||||||    
T  8138459 ggtttgaaccccagaccttacatatattatgcat 8138492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 9367464 - 9367423
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| |||||||||||||||| |||||||| ||||    
T  9367464 cggggtttgaatcccagaccttgcatattttatgcattgtcc 9367423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1037 - 1066
Target Start/End: Original strand, 10507530 - 10507559
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||||||||||||||||||    
T  10507530 gtttgaaccccagaccttgcatatattatg 10507559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1036 - 1065
Target Start/End: Complemental strand, 12440723 - 12440694
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattat 1065  Q
    ||||||||||||||||||||||||||||||    
T  12440723 ggtttgaaccccagaccttgcatatattat 12440694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 12582227 - 12582268
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  12582227 cggggtttgaactccagaccttgcatattttatgcattgtcc 12582268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 630
Target Start/End: Complemental strand, 24836329 - 24836285
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||    
T  24836329 tatgtataagttatttctataac-aaaagataaaataaagtcaaat 24836285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 707 - 768
Target Start/End: Original strand, 27857436 - 27857497
Alignment:
Q  707 ttttcataagctctcctaaatagtctcgcaagcatatatgtcaatagataaactcaaataaa 768  Q
    |||||||||||||||| ||| ||| || ||||  | ||||||| ||||||||||||||||||    
T  27857436 ttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataaactcaaataaa 27857497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 630
Target Start/End: Complemental strand, 29274359 - 29274315
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||    
T  29274359 tatgtataagctatttctatagc-aaaagataaaataaagtcaaat 29274315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 29740545 - 29740504
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| |||||||| |||||||||||| ||||    
T  29740545 cggggtttgaaccccggaccttgcgtatattatgcattgtcc 29740504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 33976307 - 33976266
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| |||||||||||| |||||||| ||||    
T  33976307 cggggtttgaaccccggaccttgcatattttatgcattgtcc 33976266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000003; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1026 - 1066
Target Start/End: Original strand, 36428685 - 36428725
Alignment:
Q  1026 gtggtggcggggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  36428685 gtggtggcggggtttgaacccctgaccttgcatatattatg 36428725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Complemental strand, 39821945 - 39821906
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  39821945 gggtttgaaccccagaccttgcatatattatgcattgtcc 39821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1033 - 1067
Target Start/End: Complemental strand, 7997003 - 7996969
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgc 1067  Q
    |||||||||||||||||||||||||||||||||||    
T  7997003 cggggtttgaaccccagaccttgcatatattatgc 7996969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 706 - 780
Target Start/End: Complemental strand, 10075546 - 10075472
Alignment:
Q  706 attttcataagctctcctaaatagtctcgcaagcatatatgtcaatagataaactcaaataaatgaatcaaaaca 780  Q
    |||| ||||||||||| |||| ||||||||||| || |||| || ||||||||||||||||| | |||| |||||    
T  10075546 atttccataagctctcttaaacagtctcgcaagtatttatgccagtagataaactcaaataagttaatcgaaaca 10075472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 12748973 - 12748923
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  12748973 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 12748923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 32051521 - 32051571
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  32051521 ggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 32051571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 26773800 - 26773841
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  26773800 cgggatttgaaccctagaccttgcatatattatgcatcgtcc 26773841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 30623356 - 30623315
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  30623356 cggggttcgaaccccagaccttgcatatattatgcattgtcc 30623315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Complemental strand, 28440022 - 28439986
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||||| ||||||||||||||    
T  28440022 cggggtttgaaccccagaccttacatatattatgcat 28439986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 30176417 - 30176453
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30176417 cggggtttgaaccccggaccttgcatatattatgcat 30176453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1033 - 1069
Target Start/End: Original strand, 31336805 - 31336841
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||| ||||||||||||||||||||||    
T  31336805 cggggtttgaaccctagaccttgcatatattatgcat 31336841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1066
Target Start/End: Original strand, 27426263 - 27426294
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatg 1066  Q
    ||||||||||||||||||||||||||||||||    
T  27426263 gggtttgaaccccagaccttgcatatattatg 27426294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1034 - 1069
Target Start/End: Complemental strand, 33105453 - 33105418
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||| |||||||||||||||||||||    
T  33105453 ggggtttgaaccccggaccttgcatatattatgcat 33105418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1035 - 1074
Target Start/End: Original strand, 38763515 - 38763554
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  38763515 gggttcgaaccccagaccttgcatatattatgcattgtcc 38763554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1066
Target Start/End: Original strand, 12800889 - 12800931
Alignment:
Q  1025 ggtggtgg-cggggtttgaaccccagaccttgcatatattatg 1066  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  12800889 ggtggtggtcggggtttgaaccccggaccttgcatatattatg 12800931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 24838159 - 24838209
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||| ||||    
T  24838159 ggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtcc 24838209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Original strand, 26215436 - 26215473
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  26215436 tatgtataagctatttctataac-aaaagataaaataaa 26215473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Complemental strand, 26813935 - 26813897
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  26813935 tatgtataaattatttctataacaaaaagataaaataaa 26813897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Complemental strand, 27587293 - 27587243
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||| ||||    
T  27587293 ggtggtggccggggtttgaaccccggaccttgcatatatcatgcattgtcc 27587243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1065
Target Start/End: Complemental strand, 29546954 - 29546924
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattat 1065  Q
    |||||||||||||||||||||||||||||||    
T  29546954 gggtttgaaccccagaccttgcatatattat 29546924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1027 - 1065
Target Start/End: Complemental strand, 32421638 - 32421600
Alignment:
Q  1027 tggtggcggggtttgaaccccagaccttgcatatattat 1065  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  32421638 tggtggccgggtttgaaccccggaccttgcatatattat 32421600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1032 - 1074
Target Start/End: Complemental strand, 32944989 - 32944947
Alignment:
Q  1032 gcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  32944989 gcggggtttgaacttcagaccttgcatatattatgcattgtcc 32944947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1069
Target Start/End: Complemental strand, 41603122 - 41603088
Alignment:
Q  1035 gggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||||||||| ||||||||||||||    
T  41603122 gggtttgaaccccagaccttacatatattatgcat 41603088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 585 - 623
Target Start/End: Original strand, 42597341 - 42597378
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaa 623  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42597341 tatgtataagctatttctataac-aaaagataaaataaa 42597378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 444476 - 444435
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||| ||||||||||||||||||||| ||||    
T  444476 cggggtttaaaccccggaccttgcatatattatgcattgtcc 444435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 1244703 - 1244744
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  1244703 cggggttcgaaccccagaccttgtatatattatgcattgtcc 1244744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 6235549 - 6235590
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||| ||| |||||| |||||||||||||||||||    
T  6235549 cggggtttgaatcccggaccttacatatattatgcatcgtcc 6235590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 7869639 - 7869680
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||  |||||||||||||||||||| ||||    
T  7869639 cggggtttgaacccccaaccttgcatatattatgcattgtcc 7869680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 8881338 - 8881297
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||  ||||||||||||||||||||| ||||    
T  8881338 cggggtttgaaccctggaccttgcatatattatgcattgtcc 8881297  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 630
Target Start/End: Original strand, 14482142 - 14482186
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaat 630  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  14482142 tatgtataaactatttctataac-aaaagataaaataaagtcaaat 14482186  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 19163534 - 19163575
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||    
T  19163534 cggggtttgaaccccggaccttgcataaattatgcattgtcc 19163575  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1025 - 1069
Target Start/End: Original strand, 19260568 - 19260613
Alignment:
Q  1025 ggtggtggc-ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  19260568 ggtggtggccggggtttgaaccccggaccttacatatattatgcat 19260613  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 29376964 - 29376923
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  29376964 cggggtttgaactccagaccttgcatatattacgcattgtcc 29376923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 32944838 - 32944879
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| |||||||||||||| |||||||| ||||    
T  32944838 cggggtttgaacctcagaccttgcatattttatgcattgtcc 32944879  T

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Target: scaffold0262 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1026 - 1074
Target Start/End: Original strand, 15920 - 15969
Alignment:
Q  1026 gtggtggc-ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  15920 gtggtggctggggtttgaaccccagaccttgcatatattatacattgtcc 15969  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Original strand, 53378 - 53419
Alignment:
Q  1033 cggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  53378 cggggtttgaaccccagaccttgcatattttatgcattgtcc 53419  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1037 - 1074
Target Start/End: Complemental strand, 99096 - 99059
Alignment:
Q  1037 gtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  99096 gtttgaaccccagaccttgcatatattatgcattgtcc 99059  T

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Target: scaffold0590 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 629
Target Start/End: Complemental strand, 1204 - 1161
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaa 629  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  1204 tatgtataagctatttctataac-aaaagataaaataaagtcaaa 1161  T

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Target: scaffold0334 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1034 - 1074
Target Start/End: Complemental strand, 5244 - 5204
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  5244 ggggtttgaacctcagaccttgcatatattatgcattgtcc 5204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 629
Target Start/End: Original strand, 2771 - 2814
Alignment:
Q  585 tatgtataagctatttctataacaaaaagataaaataaattcaaa 629  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  2771 tatgtataagctatttctataac-aaaagataaaataaagtcaaa 2814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1038 - 1074
Target Start/End: Original strand, 42337 - 42373
Alignment:
Q  1038 tttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    |||||||||||||||||||||||||||||||| ||||    
T  42337 tttgaaccccagaccttgcatatattatgcattgtcc 42373  T

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Target: scaffold1127 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1034 - 1069
Target Start/End: Original strand, 1164 - 1199
Alignment:
Q  1034 ggggtttgaaccccagaccttgcatatattatgcat 1069  Q
    |||||||||||||| |||||||||||||||||||||    
T  1164 ggggtttgaaccccggaccttgcatatattatgcat 1199  T

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Target: scaffold1149 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1074
Target Start/End: Complemental strand, 2392 - 2354
Alignment:
Q  1036 ggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  2392 ggtttgaaccccaaaccttgcatatattatgcattgtcc 2354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1025 - 1074
Target Start/End: Original strand, 1408 - 1458
Alignment:
Q  1025 ggtggtggcggggtttgaaccccagaccttgcata-tattatgcatcgtcc 1074  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||| ||||    
T  1408 ggtggtggcggggttcgaaccccagacgttgcatattattatgcattgtcc 1458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1028 - 1074
Target Start/End: Original strand, 52400 - 52446
Alignment:
Q  1028 ggtggcggggtttgaaccccagaccttgcatatattatgcatcgtcc 1074  Q
    ||||||||||||||||||||| ||||| |||||||||| ||| ||||    
T  52400 ggtggcggggtttgaaccccataccttacatatattattcattgtcc 52446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1040 - 1069
Target Start/End: Complemental strand, 122947 - 122918
Alignment:
Q  1040 tgaaccccagaccttgcatatattatgcat 1069  Q
    ||||||||||||||||||||||||||||||    
T  122947 tgaaccccagaccttgcatatattatgcat 122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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