View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: P12_high_1 (Length: 683)

Name: P12_high_1
Description: P12
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] P12_high_1
P12_high_1
[»] chr3 (83 HSPs)
chr3 (266-448)||(39391762-39391944)
chr3 (462-573)||(39392174-39392289)
chr3 (572-666)||(39392321-39392415)
chr3 (94-181)||(39391657-39391747)
chr3 (1-67)||(39390985-39391051)
chr3 (1-92)||(14170009-14170100)
chr3 (3-92)||(27219332-27219421)
chr3 (1-92)||(3985776-3985867)
chr3 (1-92)||(10453713-10453804)
chr3 (1-92)||(11244551-11244642)
chr3 (1-92)||(34715465-34715556)
chr3 (1-92)||(44573329-44573420)
chr3 (1-92)||(44573642-44573733)
chr3 (1-92)||(9179136-9179227)
chr3 (1-92)||(13769301-13769392)
chr3 (1-92)||(43101381-43101472)
chr3 (1-92)||(48511649-48511740)
chr3 (1-92)||(54369042-54369133)
chr3 (1-87)||(49477542-49477628)
chr3 (106-257)||(7976866-7977019)
chr3 (1-90)||(50203867-50203956)
chr3 (9-92)||(10450666-10450749)
chr3 (1-92)||(15820615-15820706)
chr3 (1-92)||(24453781-24453872)
chr3 (1-92)||(45443283-45443374)
chr3 (37-92)||(53966236-53966291)
chr3 (1-87)||(9264096-9264182)
chr3 (1-87)||(22407451-22407537)
chr3 (1-87)||(42258918-42259004)
chr3 (1-63)||(44573968-44574030)
chr3 (1-87)||(50692331-50692417)
chr3 (1-87)||(51642645-51642731)
chr3 (3-92)||(9180371-9180460)
chr3 (106-257)||(24241792-24241944)
chr3 (20-92)||(24860090-24860161)
chr3 (1-61)||(33909843-33909903)
chr3 (20-92)||(47833691-47833763)
chr3 (1-92)||(10856636-10856727)
chr3 (1-92)||(16060895-16060986)
chr3 (146-273)||(20634574-20634700)
chr3 (1-92)||(40769922-40770013)
chr3 (37-92)||(41380727-41380782)
chr3 (37-92)||(48511456-48511511)
chr3 (1-87)||(9264303-9264389)
chr3 (1-87)||(9264510-9264596)
chr3 (1-83)||(19820538-19820619)
chr3 (1-87)||(22339749-22339835)
chr3 (1-87)||(22407658-22407744)
chr3 (1-63)||(37058781-37058843)
chr3 (1-63)||(39078781-39078843)
chr3 (1-63)||(39956684-39956746)
chr3 (38-92)||(48685364-48685418)
chr3 (1-87)||(50692534-50692620)
chr3 (1-87)||(51338451-51338537)
chr3 (5-87)||(54495539-54495621)
chr3 (20-92)||(10450453-10450525)
chr3 (44-92)||(16045423-16045471)
chr3 (40-92)||(22666367-22666419)
chr3 (1-92)||(16051545-16051636)
chr3 (98-257)||(21307192-21307351)
chr3 (1-92)||(21750478-21750569)
chr3 (4-87)||(37223583-37223666)
chr3 (45-92)||(51734611-51734658)
chr3 (1-87)||(4029654-4029740)
chr3 (1-87)||(4191132-4191218)
chr3 (38-92)||(4256237-4256291)
chr3 (1-91)||(9178911-9179001)
chr3 (41-92)||(29391402-29391455)
chr3 (145-191)||(32666194-32666240)
chr3 (1-55)||(34356852-34356906)
chr3 (147-273)||(34396209-34396335)
chr3 (92-217)||(36636127-36636252)
chr3 (1-55)||(38300293-38300347)
chr3 (1-55)||(38300762-38300816)
chr3 (1-63)||(49477359-49477421)
chr3 (1-63)||(51642438-51642500)
chr3 (1-87)||(53640182-53640268)
chr3 (39-92)||(5321584-5321637)
chr3 (1-86)||(11414373-11414457)
chr3 (7-55)||(31564019-31564067)
chr3 (37-92)||(36020816-36020874)
chr3 (93-212)||(47283926-47284046)
chr3 (147-215)||(53470074-53470141)
[»] chr8 (45 HSPs)
chr8 (1-92)||(32931404-32931495)
chr8 (1-92)||(18905859-18905950)
chr8 (1-92)||(17607224-17607315)
chr8 (1-91)||(22277528-22277618)
chr8 (102-226)||(33422685-33422811)
chr8 (20-92)||(23027534-23027606)
chr8 (1-92)||(14019811-14019902)
chr8 (1-92)||(20298526-20298617)
chr8 (1-92)||(21085158-21085249)
chr8 (1-92)||(21653330-21653421)
chr8 (1-92)||(34248080-34248171)
chr8 (1-87)||(43599319-43599405)
chr8 (20-92)||(15711499-15711571)
chr8 (1-92)||(14582233-14582324)
chr8 (1-92)||(21653807-21653898)
chr8 (1-92)||(23027838-23027929)
chr8 (1-92)||(34248362-34248453)
chr8 (1-92)||(35908681-35908772)
chr8 (1-87)||(8559589-8559675)
chr8 (1-87)||(10989251-10989337)
chr8 (1-87)||(15011039-15011125)
chr8 (1-87)||(35561674-35561760)
chr8 (1-87)||(42228779-42228865)
chr8 (1-89)||(36997172-36997260)
chr8 (33-92)||(38287779-38287838)
chr8 (38-92)||(8276552-8276606)
chr8 (1-63)||(10989044-10989106)
chr8 (1-87)||(20760670-20760756)
chr8 (1-81)||(3183921-3184001)
chr8 (20-92)||(18464073-18464145)
chr8 (3-63)||(40902405-40902465)
chr8 (103-273)||(9982961-9983132)
chr8 (41-92)||(20232447-20232498)
chr8 (37-87)||(5720913-5720963)
chr8 (37-91)||(8605494-8605548)
chr8 (1-87)||(15010831-15010917)
chr8 (1-87)||(16454645-16454731)
chr8 (1-63)||(35561490-35561552)
chr8 (1-55)||(36039804-36039858)
chr8 (1-55)||(43984326-43984380)
chr8 (7-92)||(39587874-39587959)
chr8 (106-173)||(28324359-28324427)
chr8 (147-215)||(33376954-33377022)
chr8 (1-57)||(38287974-38288030)
chr8 (1-53)||(39588094-39588146)
[»] chr1 (62 HSPs)
chr1 (1-92)||(19937053-19937144)
chr1 (1-92)||(17419790-17419881)
chr1 (4-92)||(2697344-2697432)
chr1 (1-92)||(4022135-4022226)
chr1 (1-92)||(17294981-17295072)
chr1 (1-92)||(31305714-31305805)
chr1 (1-92)||(38474286-38474377)
chr1 (1-87)||(2997066-2997152)
chr1 (145-273)||(39588704-39588831)
chr1 (1-92)||(51722256-51722348)
chr1 (1-92)||(8520103-8520194)
chr1 (1-92)||(18585041-18585132)
chr1 (1-92)||(28509397-28509488)
chr1 (1-92)||(43423282-43423373)
chr1 (1-92)||(45858658-45858749)
chr1 (145-215)||(19652947-19653017)
chr1 (1-87)||(39649094-39649180)
chr1 (2-92)||(40664213-40664303)
chr1 (1-92)||(12287851-12287942)
chr1 (1-92)||(20735525-20735616)
chr1 (1-92)||(27958057-27958148)
chr1 (1-92)||(29228451-29228542)
chr1 (1-92)||(33879788-33879879)
chr1 (1-92)||(33964376-33964467)
chr1 (5-92)||(45443223-45443310)
chr1 (102-212)||(1902400-1902509)
chr1 (1-63)||(12233315-12233377)
chr1 (38-92)||(40642823-40642877)
chr1 (147-257)||(41822154-41822264)
chr1 (1-87)||(43361562-43361648)
chr1 (1-87)||(52846859-52846945)
chr1 (1-86)||(21538944-21539029)
chr1 (40-93)||(40521542-40521595)
chr1 (3-63)||(36326938-36326998)
chr1 (106-254)||(44571508-44571656)
chr1 (1-92)||(4187524-4187614)
chr1 (1-88)||(20735762-20735849)
chr1 (37-92)||(29228678-29228733)
chr1 (1-92)||(29383633-29383724)
chr1 (1-92)||(37600875-37600966)
chr1 (1-87)||(15392033-15392119)
chr1 (1-55)||(22892443-22892497)
chr1 (1-87)||(29273235-29273321)
chr1 (1-87)||(43361767-43361853)
chr1 (9-90)||(33562145-33562226)
chr1 (110-217)||(6470350-6470458)
chr1 (1-65)||(28950928-28950992)
chr1 (1-65)||(36332142-36332206)
chr1 (1-57)||(45403478-45403534)
chr1 (1-92)||(2104270-2104361)
chr1 (1-92)||(30604470-30604561)
chr1 (1-55)||(463093-463147)
chr1 (1-55)||(11149433-11149487)
chr1 (1-83)||(15391831-15391913)
chr1 (46-92)||(20208137-20208183)
chr1 (46-92)||(20208436-20208482)
chr1 (2-92)||(31411571-31411661)
chr1 (1-63)||(33342288-33342350)
chr1 (1-87)||(48558331-48558417)
chr1 (153-257)||(32647656-32647761)
chr1 (147-215)||(946740-946807)
chr1 (1-57)||(15392142-15392198)
[»] chr7 (64 HSPs)
chr7 (1-92)||(257277-257368)
chr7 (1-92)||(36092402-36092493)
chr7 (1-92)||(43384290-43384381)
chr7 (1-92)||(1661201-1661292)
chr7 (1-90)||(43383956-43384045)
chr7 (1-92)||(27585259-27585350)
chr7 (1-92)||(28910035-28910126)
chr7 (1-92)||(34748781-34748872)
chr7 (1-91)||(36092609-36092699)
chr7 (1-92)||(1663614-1663706)
chr7 (1-92)||(7135253-7135344)
chr7 (1-92)||(36495892-36495983)
chr7 (1-92)||(37272055-37272146)
chr7 (1-92)||(37530933-37531024)
chr7 (1-92)||(41670586-41670677)
chr7 (1-92)||(36270480-36270571)
chr7 (37-92)||(39550024-39550079)
chr7 (1-92)||(40121628-40121719)
chr7 (1-92)||(47346104-47346195)
chr7 (1-92)||(47346333-47346424)
chr7 (1-87)||(6783046-6783132)
chr7 (1-87)||(9378801-9378887)
chr7 (1-87)||(36237810-36237896)
chr7 (1-91)||(36495670-36495760)
chr7 (39-92)||(33909140-33909193)
chr7 (8-92)||(22206295-22206379)
chr7 (8-92)||(22228360-22228444)
chr7 (4-83)||(9379012-9379091)
chr7 (1-92)||(12518180-12518271)
chr7 (1-92)||(34914930-34915021)
chr7 (37-92)||(37755984-37756039)
chr7 (37-92)||(37756210-37756265)
chr7 (37-92)||(37761958-37762013)
chr7 (1-92)||(43167903-43167994)
chr7 (5-92)||(43288267-43288354)
chr7 (1-55)||(12578470-12578524)
chr7 (102-203)||(14790395-14790496)
chr7 (1-87)||(21557024-21557110)
chr7 (38-92)||(22686780-22686834)
chr7 (1-87)||(31374773-31374859)
chr7 (1-87)||(36238013-36238099)
chr7 (11-92)||(20296266-20296347)
chr7 (110-254)||(30080392-30080537)
chr7 (9-90)||(40121957-40122038)
chr7 (3-56)||(43288571-43288624)
chr7 (1-65)||(14991519-14991583)
chr7 (1-65)||(15421130-15421194)
chr7 (1-92)||(19843487-19843577)
chr7 (1-92)||(19843710-19843801)
chr7 (1-92)||(29780150-29780241)
chr7 (1-92)||(36270707-36270798)
chr7 (147-226)||(37460582-37460660)
chr7 (41-92)||(44314354-44314405)
chr7 (9-87)||(6782834-6782912)
chr7 (1-87)||(23396617-23396703)
chr7 (1-92)||(27729484-27729579)
chr7 (9-87)||(29252584-29252662)
chr7 (1-87)||(35866649-35866735)
chr7 (1-87)||(39808607-39808693)
chr7 (1-55)||(40703421-40703475)
chr7 (147-228)||(2411670-2411751)
chr7 (193-258)||(45181836-45181901)
chr7 (147-215)||(30629417-30629485)
chr7 (147-215)||(35456163-35456231)
[»] chr2 (69 HSPs)
chr2 (1-92)||(3976481-3976572)
chr2 (1-92)||(23054329-23054420)
chr2 (1-90)||(39596716-39596805)
chr2 (1-92)||(10862068-10862159)
chr2 (1-92)||(11969055-11969146)
chr2 (1-92)||(21213895-21213986)
chr2 (1-91)||(42768344-42768432)
chr2 (1-92)||(43195787-43195878)
chr2 (8-92)||(33532753-33532837)
chr2 (1-92)||(3977013-3977104)
chr2 (1-92)||(6183376-6183467)
chr2 (1-92)||(21214211-21214302)
chr2 (1-92)||(25441699-25441790)
chr2 (1-87)||(883611-883697)
chr2 (1-86)||(27545126-27545211)
chr2 (112-228)||(44205301-44205418)
chr2 (4-92)||(43169245-43169333)
chr2 (33-92)||(4506082-4506141)
chr2 (1-92)||(7877847-7877938)
chr2 (1-92)||(15962167-15962258)
chr2 (1-87)||(3435496-3435582)
chr2 (1-87)||(12431906-12431992)
chr2 (38-92)||(14288924-14288978)
chr2 (1-87)||(16006985-16007071)
chr2 (1-87)||(17727412-17727498)
chr2 (1-87)||(20998999-20999085)
chr2 (1-92)||(36161357-36161448)
chr2 (37-92)||(4342304-4342359)
chr2 (37-92)||(11349839-11349894)
chr2 (1-92)||(11350197-11350288)
chr2 (1-92)||(18901874-18901965)
chr2 (1-92)||(28193345-28193436)
chr2 (1-92)||(28193585-28193676)
chr2 (1-92)||(39420700-39420791)
chr2 (147-217)||(2925009-2925079)
chr2 (1-92)||(3976163-3976256)
chr2 (147-257)||(8736046-8736156)
chr2 (1-87)||(19860045-19860131)
chr2 (1-87)||(34775365-34775451)
chr2 (1-87)||(39108096-39108182)
chr2 (4-85)||(33985988-33986069)
chr2 (2-87)||(40009982-40010067)
chr2 (147-228)||(41585304-41585384)
chr2 (147-228)||(44255992-44256073)
chr2 (178-273)||(3271356-3271452)
chr2 (20-92)||(10861863-10861935)
chr2 (1-93)||(17325172-17325264)
chr2 (3-55)||(30156248-30156300)
chr2 (20-87)||(12432113-12432180)
chr2 (37-92)||(14280283-14280338)
chr2 (1-92)||(15961810-15961901)
chr2 (37-92)||(30166125-30166180)
chr2 (1-87)||(33985781-33985865)
chr2 (5-87)||(884065-884147)
chr2 (38-92)||(936815-936869)
chr2 (37-87)||(6986462-6986512)
chr2 (38-92)||(10862309-10862363)
chr2 (1-55)||(30160367-30160421)
chr2 (38-92)||(32810923-32810977)
chr2 (38-92)||(44266355-44266409)
chr2 (147-228)||(1583442-1583523)
chr2 (147-212)||(3092603-3092668)
chr2 (147-228)||(11141663-11141744)
chr2 (38-87)||(12419846-12419895)
chr2 (147-215)||(769389-769457)
chr2 (1-53)||(15061275-15061327)
chr2 (20-92)||(17509112-17509184)
chr2 (3-63)||(29684043-29684103)
chr2 (147-215)||(33188913-33188981)
[»] chr6 (38 HSPs)
chr6 (1-92)||(8144020-8144111)
chr6 (1-92)||(24055119-24055210)
chr6 (2-92)||(21067068-21067158)
chr6 (2-92)||(21088859-21088949)
chr6 (1-89)||(19054499-19054587)
chr6 (1-92)||(10418348-10418439)
chr6 (1-86)||(28149802-28149887)
chr6 (1-89)||(1744852-1744940)
chr6 (1-89)||(12134493-12134581)
chr6 (1-92)||(10733448-10733539)
chr6 (1-92)||(17096708-17096799)
chr6 (37-92)||(33396310-33396365)
chr6 (1-87)||(15101121-15101207)
chr6 (1-87)||(16877020-16877106)
chr6 (20-92)||(26842723-26842795)
chr6 (1-87)||(5269283-5269369)
chr6 (147-257)||(8475487-8475597)
chr6 (1-87)||(16590192-16590278)
chr6 (1-87)||(16605102-16605188)
chr6 (1-91)||(30539239-30539329)
chr6 (39-92)||(26339890-26339943)
chr6 (1-85)||(11313392-11313476)
chr6 (20-92)||(21043810-21043882)
chr6 (5-89)||(27443551-27443635)
chr6 (5-92)||(8427553-8427640)
chr6 (9-92)||(25184213-25184296)
chr6 (1-92)||(28068429-28068520)
chr6 (1-55)||(1469001-1469055)
chr6 (38-88)||(16194027-16194077)
chr6 (1-63)||(16876840-16876902)
chr6 (1-63)||(19712619-19712681)
chr6 (1-87)||(24558591-24558677)
chr6 (46-92)||(27582124-27582170)
chr6 (1-55)||(27914336-27914390)
chr6 (3-92)||(31885-31974)
chr6 (1-54)||(17147915-17147968)
chr6 (170-226)||(1405474-1405530)
chr6 (32-92)||(33396529-33396588)
[»] chr4 (62 HSPs)
chr4 (1-92)||(29669373-29669464)
chr4 (1-92)||(53740185-53740276)
chr4 (1-92)||(991207-991298)
chr4 (1-92)||(15665156-15665247)
chr4 (1-92)||(29669688-29669779)
chr4 (1-92)||(45427262-45427353)
chr4 (1-92)||(50858015-50858106)
chr4 (1-92)||(51469484-51469575)
chr4 (1-91)||(990551-990641)
chr4 (1-87)||(5488375-5488461)
chr4 (3-92)||(43798139-43798228)
chr4 (1-92)||(36558476-36558567)
chr4 (1-92)||(45426946-45427037)
chr4 (1-92)||(51470486-51470577)
chr4 (1-92)||(53739869-53739960)
chr4 (147-273)||(17727769-17727894)
chr4 (1-91)||(23018474-23018564)
chr4 (6-92)||(37288884-37288970)
chr4 (1-87)||(43943681-43943767)
chr4 (1-91)||(43972359-43972449)
chr4 (1-92)||(11290172-11290263)
chr4 (9-92)||(22867087-22867170)
chr4 (1-92)||(27048418-27048509)
chr4 (1-92)||(46528933-46529024)
chr4 (1-92)||(50868023-50868114)
chr4 (1-87)||(12016693-12016779)
chr4 (1-87)||(12016901-12016987)
chr4 (1-87)||(27634336-27634422)
chr4 (1-91)||(29734565-29734655)
chr4 (1-92)||(50858331-50858419)
chr4 (1-89)||(52214621-52214709)
chr4 (1-92)||(13254386-13254477)
chr4 (111-273)||(31947893-31948056)
chr4 (1-92)||(33912046-33912137)
chr4 (1-56)||(52827242-52827297)
chr4 (1-92)||(56509612-56509703)
chr4 (1-55)||(21497693-21497747)
chr4 (1-55)||(21498227-21498281)
chr4 (1-87)||(21498539-21498625)
chr4 (1-87)||(25753615-25753701)
chr4 (2-92)||(26941864-26941954)
chr4 (5-87)||(39110915-39110997)
chr4 (1-86)||(29113458-29113543)
chr4 (1-78)||(35269028-35269105)
chr4 (38-91)||(52810672-52810725)
chr4 (8-92)||(2016535-2016619)
chr4 (44-92)||(4026076-4026124)
chr4 (4-56)||(28085733-28085785)
chr4 (1-92)||(34206003-34206095)
chr4 (1-92)||(37097741-37097832)
chr4 (1-92)||(53738218-53738309)
chr4 (1-87)||(28497224-28497310)
chr4 (1-55)||(41176746-41176800)
chr4 (9-87)||(41743168-41743246)
chr4 (9-87)||(49380898-49380976)
chr4 (38-92)||(49544335-49544389)
chr4 (1-87)||(54210385-54210471)
chr4 (127-255)||(5715975-5716104)
chr4 (11-92)||(48843037-48843118)
chr4 (20-92)||(991041-991112)
chr4 (1-53)||(27048147-27048199)
chr4 (1-92)||(34206265-34206357)
[»] chr5 (64 HSPs)
chr5 (1-92)||(84044-84135)
chr5 (1-92)||(37995644-37995735)
chr5 (1-92)||(24994075-24994163)
chr5 (9-92)||(1028111-1028194)
chr5 (1-92)||(13843700-13843791)
chr5 (1-92)||(13844016-13844107)
chr5 (1-92)||(22196336-22196427)
chr5 (1-92)||(22196563-22196654)
chr5 (1-92)||(38131767-38131858)
chr5 (1-87)||(35526998-35527084)
chr5 (1-62)||(24918194-24918255)
chr5 (3-92)||(30329839-30329928)
chr5 (20-92)||(28009826-28009898)
chr5 (106-257)||(28489779-28489930)
chr5 (1-92)||(83821-83911)
chr5 (1-92)||(873706-873797)
chr5 (1-92)||(2471703-2471794)
chr5 (147-258)||(17492769-17492879)
chr5 (5-92)||(27760078-27760165)
chr5 (1-92)||(29432415-29432506)
chr5 (1-92)||(32395324-32395415)
chr5 (1-92)||(33040066-33040157)
chr5 (37-92)||(39668463-39668518)
chr5 (1-87)||(48114-48200)
chr5 (1-87)||(24125070-24125156)
chr5 (1-87)||(38376739-38376825)
chr5 (1-86)||(3762915-3763000)
chr5 (3-92)||(30330064-30330153)
chr5 (1-92)||(14769842-14769933)
chr5 (1-92)||(20811457-20811548)
chr5 (1-92)||(20837812-20837903)
chr5 (1-92)||(29396353-29396444)
chr5 (1-87)||(2716554-2716640)
chr5 (1-87)||(2908572-2908658)
chr5 (1-87)||(13413592-13413678)
chr5 (195-273)||(21541144-21541222)
chr5 (1-87)||(28358045-28358131)
chr5 (1-87)||(34457311-34457397)
chr5 (1-87)||(37656742-37656828)
chr5 (1-87)||(40169051-40169137)
chr5 (3-92)||(33040473-33040562)
chr5 (8-92)||(19439863-19439947)
chr5 (20-92)||(28010145-28010217)
chr5 (1-92)||(18541725-18541816)
chr5 (9-92)||(24792285-24792367)
chr5 (37-92)||(30588060-30588115)
chr5 (1-56)||(38663286-38663341)
chr5 (1-63)||(48321-48383)
chr5 (1-87)||(11632439-11632525)
chr5 (1-55)||(12965256-12965310)
chr5 (1-87)||(20720560-20720646)
chr5 (1-55)||(28156070-28156124)
chr5 (1-63)||(34457128-34457190)
chr5 (1-87)||(37781854-37781940)
chr5 (1-87)||(43490473-43490559)
chr5 (147-228)||(927659-927740)
chr5 (38-87)||(17135527-17135576)
chr5 (38-87)||(43490303-43490352)
chr5 (1-53)||(2908779-2908831)
chr5 (129-256)||(8255301-8255429)
chr5 (92-159)||(28490238-28490306)
chr5 (39-83)||(30870933-30870977)
chr5 (1-57)||(35527284-35527340)
chr5 (147-215)||(41761868-41761936)
[»] scaffold0129 (1 HSPs)
scaffold0129 (110-257)||(19388-19536)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-92)||(165787-165871)
[»] scaffold0785 (1 HSPs)
scaffold0785 (38-92)||(3167-3221)
[»] scaffold0169 (1 HSPs)
scaffold0169 (98-257)||(4331-4487)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-87)||(76860-76946)
[»] scaffold0419 (1 HSPs)
scaffold0419 (1-63)||(4249-4311)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-86)||(13315-13400)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-89)||(43726-43810)
[»] scaffold0166 (1 HSPs)
scaffold0166 (9-92)||(34668-34750)
[»] scaffold0989 (1 HSPs)
scaffold0989 (1-87)||(2957-3043)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-87)||(21273-21359)


Alignment Details
Target: chr3 (Bit Score: 146; Significance: 1e-76; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 266 - 448
Target Start/End: Original strand, 39391762 - 39391944
Alignment:
Q  266 aattgaatgaggcatataattctaatttctccaaaatgaattggtgcttgcttagctgattgcatttcttctcttgaagtttttgacaactcatccacat 365  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39391762 aattgaatcaggcatataattctaatttctccaaaatgaattggtgcttgcttagcttattgcatttcttctcttgaagtttttgacaactcatccacat 39391861  T
Q  366 aggtcgctaaactgccatgattcgttaaacggattttgcgnnnnnnnctaagcggattgtgctctatattgggccttcaattc 448  Q
    |||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||    
T  39391862 aggtcgctaaactgacatgattcgttaaacggattttgcgtttttttctaagcggattgtgctctatattgggcctttaattc 39391944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 462 - 573
Target Start/End: Original strand, 39392174 - 39392289
Alignment:
Q  462 cctatagtgcttgcttcatat----gcttgttggtttggagtgcaggcaatgaattttaactatttgatatgtttgtacatggtgaatttgaaagggaat 557  Q
    |||||||||||||||||||||    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39392174 cctatagtgcttgcttcatatatatgcttgttggtttggagtgcaggcaatgaactttaactatttgatatgtttgtacatggtgaatttgaaagggaat 39392273  T
Q  558 gaatttagtagtcttt 573  Q
    ||||||||||||||||    
T  39392274 gaatttagtagtcttt 39392289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 572 - 666
Target Start/End: Original strand, 39392321 - 39392415
Alignment:
Q  572 ttgaacaggtaaaaatattgtcatgattcatgaaataattggcctgctggggtatagtgtaatcagttagtgaggattggagcatagcattgcat 666  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39392321 ttgaacaggtaaaaacattgccatgattcatgaaataattggcctgctggggtatagtgtaatcagttagtgaggattggagcattgcattgcat 39392415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 39391657 - 39391747
Alignment:
Q  94 aaatattgcaaattggcccctcaaaatttttggtatttgcaaattaaccc---ttttttcaattttcaaagttgacccgaaaaattcaaaa 181  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||| |||||||||||||    
T  39391657 aaatattgcaaattgtcccctcaaaatttttggtatttgcaatttaaccctttttttttcaattttcaaagttgaccggaaaaattcaaaa 39391747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39390985 - 39391051
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaatta 67  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39390985 tcatccttacaaaagcgaattgtaaggcgagtagtacctcctctttataaactcttcccaataatta 39391051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14170009 - 14170100
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||| ||||| ||||| |  |||||||||||||||||||||||||    
T  14170009 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaaatcttctcaagagtgttatttatccgatgtgggactaaatc 14170100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 27219421 - 27219332
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  27219421 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 27219332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3985867 - 3985776
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| | ||||||||||||||||||| ||| | | |||| |||||||||||||||||||||    
T  3985867 tcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatc 3985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10453713 - 10453804
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||||||||| |||| |||||||  ||| |||||||| ||||||||||||    
T  10453713 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaacccttctcaagaatcctatctatccgatctgggactaaatc 10453804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11244551 - 11244642
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||||||   ||| |||||||||||||||||||||    
T  11244551 tcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatc 11244642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34715465 - 34715556
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||| | |  ||| |||||||||||||||||||||    
T  34715465 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaaagtgctatctatccgatgtgggactaaatc 34715556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44573420 - 44573329
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  44573420 tcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 44573329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44573733 - 44573642
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| || ||| ||||  |||||||||||||||    
T  44573733 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagatttttatctatcttatgtgggactaaatc 44573642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9179227 - 9179136
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||  |||||||| ||| ||| | ||||||||||||||||||| || |||| || | |||||||||||||||||||||    
T  9179227 tcatccttacaaaaccgacttgtaaggtgaggagtgcatcctctttataaactcttctcatgaatcatgtctatccgatgtgggactaaatc 9179136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13769301 - 13769392
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||| |||||||||||||||    
T  13769301 tcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatc 13769392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 43101381 - 43101472
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||  |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  43101381 tcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgatgtgggactaaatc 43101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48511649 - 48511740
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  48511649 tcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 48511740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 54369133 - 54369042
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||| ||| ||| |||||| | ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  54369133 tcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 54369042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 49477628 - 49477542
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  49477628 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 49477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 7976866 - 7977019
Alignment:
Q  106 ttggcccctcaaaatttttggtatttgcaaattaa-cccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaata 204  Q
    ||||||||||||||||||||  |||| |||||| | ||||  |||||||||||||| ||| ||| ||||| |||||||| |||||||  ||||||||||     
T  7976866 ttggcccctcaaaatttttgaaatttacaaattgatccctaatttcaattttcaaatttggcccaaaaaaatcaaaatttataaaagttgcccaaaaatg 7976965  T
Q  205 ataacaatgaaa-tgatttattactctaaccaaccaacaatatttagaaatgaa 257  Q
    ||  |||||||| |  |||||| ||| | |||| ||| |||||| |||||||||    
T  7976966 atggcaatgaaatttttttatttctccatccaaacaaaaatattgagaaatgaa 7977019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 50203867 - 50203956
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaa 90  Q
    |||||||||||||| ||| || ||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||||||| |||||||    
T  50203867 tcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagactaaa 50203956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 10450666 - 10450749
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||||||   ||| |||||||||||||||||||||    
T  10450666 acaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatc 10450749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15820615 - 15820706
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| |||  |||||| ||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  15820615 tcatccctacaaaaccggcttgtacggtgaggagtgtctcctcgttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 15820706  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24453872 - 24453781
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| |||||| |||||||||||||| ||||||   ||| |||||||||||||||||||||    
T  24453872 tcatccatacaaaaccggcttgtacggtgaggagtgcctcctgtttataaactcttctcaagaaccctatctatccgatgtgggactaaatc 24453781  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 45443374 - 45443283
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||| |||| ||| |||||||| ||  ||| ||||||||||||||||||||| ||||| |  ||| ||||| |||||||||||||||    
T  45443374 tcatccttaaaaaaccggcttgtaaggtgaagagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatc 45443283  T

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Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 53966291 - 53966236
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  53966291 cctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 53966236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9264096 - 9264182
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  9264096 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 9264182  T

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Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22407451 - 22407537
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||| ||||||| | ||| || | | ||||||||||||||||    
T  22407451 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctcgagagttttgtctatccgatgtgggact 22407537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42259004 - 42258918
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||| ||||| ||| |||||||| ||| | | ||||||||||||| ||||||| |||||||  ||| ||||||||||||||||    
T  42259004 tcatccttgcaaaatcggcttgtaaggtgaggattgcctcctctttatatactcttctcaagaatcttatctatccgatgtgggact 42258918  T

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Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44574030 - 44573968
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||    
T  44574030 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 44573968  T

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Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50692417 - 50692331
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  50692417 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 50692331  T

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Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51642645 - 51642731
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  51642645 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 51642731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 9180460 - 9180371
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||| | | ||||| || ||| |||  |||||||||||||||| ||| |||||||  ||| |||||||||||||||||||||    
T  9180460 atccttacaaaaccagcttgtacggtgaggagtgtctcctctttataaacttttctcaagaatcctatctatccgatgtgggactaaatc 9180371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 24241944 - 24241792
Alignment:
Q  106 ttggcccctcaaaatttttggtatttgcaaattaacccttt-tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaata 204  Q
    ||||||||||||||||||||  ||||  ||||| |||| |  |||||||||||||| ||| ||| ||||| | |||||| |||||||  || |||||||     
T  24241944 ttggcccctcaaaatttttgaaatttaaaaattgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgctcaaaaatg 24241845  T
Q  205 ataacaatgaaatgatttattactctaaccaaccaacaatatttagaaatgaa 257  Q
    ||  |||||||||  |||||| ||| | |||| ||| |||||| |||||||||    
T  24241844 atgccaatgaaattttttatttctccatccaaacaaaaatattgagaaatgaa 24241792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 24860090 - 24860161
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||| ||| ||||||||||||||||||||| ||||| |  |||||||||||||| ||||||||||    
T  24860090 ttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatttatccgatgt-ggactaaatc 24860161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33909843 - 33909903
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaa 61  Q
    |||||||||||||| ||| |||||||||||| ||| | |||||||||||||||||| ||||    
T  33909843 tcatccttacaaaaccggcttgtaaggcgaggagtgcatcctctttataaactcttaccaa 33909903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 47833691 - 47833763
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||| ||| |||||||||||||||| |||| ||||| |  ||| |||||||||||||||||||||    
T  47833691 ttgtaaggtgaggagtgcctcctctttataaacacttctcaagagtcctatctatccgatgtgggactaaatc 47833763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10856636 - 10856727
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||  |  || ||| ||||||||||||||||||||  |||||||  |||  ||||||||||||||||||||    
T  10856636 tcatccttacaaaaccggcttgtatagtaaggagtgcctcctctttataaactcttttcaagaatcctatccatccgatgtgggactaaatc 10856727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16060895 - 16060986
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | ||||| || ||  |||  ||| |||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  16060895 tcatccttacaaaaccagcttgtacggtgaagagtgtctcatctttataaactcttctcaagaatattatatatccgatgtgggactaaatc 16060986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 20634574 - 20634700
Alignment:
Q  146 ttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaata 245  Q
    ||||||||||||||||||| ||  ||| || || |||| | || || | |||||||||||| |||||||||| ||||||||||| | |||| ||| ||||    
T  20634574 ttttcaattttcaaagttggcca-aaacatccataatttacaagagtaacccaaaaataatgacaatgaaattatttattactcaatccaaacaaaaata 20634672  T
Q  246 tttagaaatgaagtgaattcaattgaat 273  Q
    |||| |||| | |  |||||||||||||    
T  20634673 tttaaaaataatgacaattcaattgaat 20634700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40769922 - 40770013
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| |||||  | ||| |||  ||||||||||| |||||||| ||| ||| |||| |||||||||||||||||||||    
T  40769922 tcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttatgaactcttcacaataatcatatctatccgatgtgggactaaatc 40770013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 41380782 - 41380727
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  41380782 cctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 41380727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 48511456 - 48511511
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  48511456 cctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 48511511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9264303 - 9264389
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  | | ||||||||||||||||    
T  9264303 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttgtctatccgatgtgggact 9264389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9264510 - 9264596
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||| | ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  9264510 tcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 9264596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19820538 - 19820619
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgg 83  Q
    |||||||||||||| ||| |||||||| ||| | |  |||||||||||||||||||| ||||| || || |||||||||||||    
T  19820538 tcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagtttta-ttatccgatgtgg 19820619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22339835 - 22339749
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||  |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  22339835 tcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 22339749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22407658 - 22407744
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||| ||||||| | ||| |  | | ||||||||||||||||    
T  22407658 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctcgagagtcttgtctatccgatgtgggact 22407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37058781 - 37058843
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | ||||||||||||||| ||||||| |||||    
T  37058781 tcatccttacaaaaccggtttgtaaggtgaggattacctcctctttatatactcttctcaaga 37058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39078781 - 39078843
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| |||||    
T  39078781 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 39078843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39956684 - 39956746
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| |||||    
T  39956684 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 39956746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 48685364 - 48685418
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  48685364 ctcctctttataaactcttctcaagagtactatatatccgatgtgggactaaatc 48685418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50692620 - 50692534
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||  ||||| |  | | ||||||||||||||||    
T  50692620 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgggact 50692534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51338451 - 51338537
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| |||| |||||||||||    
T  51338451 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggact 51338537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 54495621 - 54495539
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||| ||| |||||||| ||| | |  |||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  54495621 ccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 54495539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 10450453 - 10450525
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| || ||| ||| ||||||| ||||||||||||| ||||||   ||| |||||||||||||||||||||    
T  10450453 ttgtacggtgaggagtgcctcctcgttataaactcttctcaagaaacctatctatccgatgtgggactaaatc 10450525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 16045423 - 16045471
Alignment:
Q  44 tttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  16045423 tttataaactcttctcaagaatattatatatccgatgtgggactaaatc 16045471  T

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Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 22666367 - 22666419
Alignment:
Q  40 cctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||| |||||||  ||| ||||||| |||||||||||||    
T  22666367 cctctttataaactcttctcaagaatcctatctatccgacgtgggactaaatc 22666419  T

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Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16051545 - 16051636
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||  | |  ||| |||||||||||||||| |||||||  ||| |||| ||||||||||||||||    
T  16051545 tcatccttacaaaaccggcttgtacggtgaagaatgtctcatctttataaactcttctcaagaatattatatatctgatgtgggactaaatc 16051636  T

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Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 21307351 - 21307192
Alignment:
Q  98 attgcaaattggcccctcaaaatttttggtatttgcaaattaacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagccc 197  Q
    ||||||||||| ||||||||||||||||  |||| |||| | |||||  |||||||||| ||| ||| ||| |||||   |||||| | ||||   | ||    
T  21307351 attgcaaattgacccctcaaaatttttgaaatttacaaactgaccctaatttcaatttttaaatttggcccaaaaaaaataaaatttacaaaaagtggcc 21307252  T
Q  198 aaaaataataacaatgaaatgatttattactctaaccaaccaacaatatttagaaatgaa 257  Q
     ||||| || | ||||||||  |||||||||| | |||| ||| |||||| |||||||||    
T  21307251 caaaatgatgataatgaaatcttttattactccatccaaacaaaaatattgagaaatgaa 21307192  T

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Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21750569 - 21750478
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  || |||||||| ||| ||| |||||||||||||||||||   ||||  |  ||| || ||||||||||||||||||    
T  21750569 tcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaaccgatgtgggactaaatc 21750478  T

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Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 37223666 - 37223583
Alignment:
Q  4 tccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||||||| ||| |||||||| ||  | | ||||||||||||||||||||| || || |  ||| ||||||||||||||||    
T  37223666 tccttacaaaaccggcttgtaaggtgatgattgcctcctctttataaactcttctcaggagtcttatctatccgatgtgggact 37223583  T

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Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 51734611 - 51734658
Alignment:
Q  45 ttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  51734611 ttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 51734658  T

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Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4029654 - 4029740
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||  | |   ||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  4029654 tcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttatctatccgatgtgggact 4029740  T

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Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4191132 - 4191218
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| ||||||||  || | |  |||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  4191132 tcatccttacaaaaccggcttgtaaggtcaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 4191218  T

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Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 4256291 - 4256237
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| ||||| |  |||  ||||||||||||||||||||    
T  4256291 ctcctctttataaactcttctcaagagtgttatccatccgatgtgggactaaatc 4256237  T

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Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9179001 - 9178911
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||| |||||  || |||||||| ||  |||  ||||||||||||||||||||  ||||||  ||| |||||||| |||||||||||    
T  9179001 tcatccttccaaaactggcttgtaaggtgaagagtgtctcctctttataaactcttcttaagaatcctatctatccgatatgggactaaat 9178911  T

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Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 29391402 - 29391455
Alignment:
Q  41 ctctttataaactcttcccaagaa--ttatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||| ||||||  |||||| |||||||||| ||||||||||    
T  29391402 ctctttataaactcttctcaagaatgttatatctatccgatgtaggactaaatc 29391455  T

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Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 32666194 - 32666240
Alignment:
Q  145 tttttcaattttcaaagttgacccgaaaaattcaaaattgataaaag 191  Q
    |||||||||||||||| ||||||| ||||||| |||||| |||||||    
T  32666194 tttttcaattttcaaatttgaccccaaaaatttaaaatttataaaag 32666240  T

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Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34356852 - 34356906
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| ||| | |||||||||||||||||    
T  34356852 tcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 34356906  T

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Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 273
Target Start/End: Complemental strand, 34396335 - 34396209
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatat 246  Q
    |||||||||||||| ||| ||  ||||| | |||||| || ||||   ||||||||| || ||| ||||||  |||||||||||| |||| ||| | |||    
T  34396335 tttcaattttcaaatttggccaaaaaaaattaaaatttattaaagttccccaaaaatgatgacattgaaattttttattactctacccaaacaaaagtat 34396236  T
Q  247 ttagaaatgaagtgaattcaattgaat 273  Q
    | |||||||||  ||||| ||||||||    
T  34396235 tgagaaatgaaaagaatttaattgaat 34396209  T

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Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 36636127 - 36636252
Alignment:
Q  92 caaaatattgcaaattggcccctcaaaatttttggtatttgcaaattaa-cccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaa 190  Q
    ||||| ||||||||||| |||||| |||||||| | ||||||||||||| ||||  |||||||||||||| |||  || ||||| | |||| | || |||    
T  36636127 caaaaaattgcaaattgacccctc-aaattttttgaatttgcaaattaacccctgatttcaattttcaaatttggtccaaaaaaataaaaaattatgaaa 36636225  T
Q  191 gcagcccaaaaataataacaatgaaat 217  Q
    |  || ||||||| || ||||||||||    
T  36636226 gttgctcaaaaatgatgacaatgaaat 36636252  T

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Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38300293 - 38300347
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| | | ||| |||||||||||||||||||    
T  38300293 tcatccttacaaaaccggcttgtaaggtggggagtgcctcctctttataaactct 38300347  T

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Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38300762 - 38300816
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||||||    
T  38300762 tcatccgtacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 38300816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49477421 - 49477359
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||| ||| |||||    
T  49477421 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttttctcaaga 49477359  T

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Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51642438 - 51642500
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| |||||    
T  51642438 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaaga 51642500  T

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Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 53640182 - 53640268
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||||||| || ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| |||| |||||||||||    
T  53640182 tcatccttacataaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggact 53640268  T

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Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 5321584 - 5321637
Alignment:
Q  39 tcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||  ||| |||  ||| |||||||||||||||||||||    
T  5321584 tcctctttataaactcttttcaaaaatcctatctatccgatgtgggactaaatc 5321637  T

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Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11414457 - 11414373
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggac 86  Q
    |||||||||||||| ||| || ||||| ||| | |  |||||||||||||||||||| ||||| |  || ||||||||||||||||    
T  11414457 tcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaagagtctta-ttatccgatgtgggac 11414373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 31564019 - 31564067
Alignment:
Q  7 ttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||| ||| |||||||| ||| ||| |||||||||||||||||||    
T  31564019 ttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 31564067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 36020874 - 36020816
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatat---ttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||| ||| ||||   |||||||||||| |||||||||    
T  36020874 cctcctctttataaactcttctcaaaaatcatatctattatccgatgtgagactaaatc 36020816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 47284046 - 47283926
Alignment:
Q  93 aaaatattgcaaattggcccctcaaaatttttggtatttgcaaatt-aacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaag 191  Q
    |||| ||||||||||| ||||||||||||||||  |||| |||||| | ||||  ||| | |||||||| ||| ||| ||||| | |||||| |||||||    
T  47284046 aaaaaattgcaaattgacccctcaaaatttttgaaattttcaaattgacccctaattttatttttcaaatttggcccaaaaaaattaaaatttataaaag 47283947  T
Q  192 cagcccaaaaataataacaat 212  Q
      | |||||||| || |||||    
T  47283946 ttgtccaaaaattatgacaat 47283926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 53470141 - 53470074
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||| ||| ||||||| |||||| |||||||  |||||||||| || ||||||||    
T  53470141 tttcaattttcaaatttggcccaaaaaatt-aaaatttataaaagttgcccaaaaatgatgacaatgaa 53470074  T

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Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32931495 - 32931404
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  32931495 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatgatatctatccgatgtgggactaaatc 32931404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18905950 - 18905859
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  18905950 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 18905859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17607224 - 17607315
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  || ||||| || ||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||| |||||||||    
T  17607224 tcatccttacaaaactggcttgtacggtgagtagtgcctcctctttataaactcttcacaagaatcctatctatccgatgtgagactaaatc 17607315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22277618 - 22277528
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| ||| |||||||| |||||||  |||||||||||||||||||| | | |||  ||| ||||||||||||||||||||    
T  22277618 tcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaactcttctcgataatgttatatatccgatgtgggactaaat 22277528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 33422811 - 33422685
Alignment:
Q  102 caaattggcccctcaaaatttttggtatttgcaaattaac-ccttttt-tcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaa 199  Q
    |||||||  |||||||||||||||  |||| |||||| || ||| ||| |||||||||||||||| ||| |||| ||||||||| ||||||| || | ||    
T  33422811 caaattgatccctcaaaatttttgaaattttcaaattgacacctatttgtcaattttcaaagttgtcccaaaaatttcaaaatttataaaagtaggctaa 33422712  T
Q  200 aaataataacaatgaaatgatttatta 226  Q
    |||||||||||||||||  ||||||||    
T  33422711 aaataataacaatgaaaatatttatta 33422685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 23027534 - 23027606
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||    
T  23027534 ttgtaaggcgattagtgcctcctctttataaactcttctcaagagttctatctatctgatgtgggactaaatc 23027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14019902 - 14019811
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||  || ||| ||| ||||||||||||||||||||| ||||||   ||| |||||||||||||||||||||    
T  14019902 tcatccttacaaaaccggcttgttcggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatc 14019811  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20298526 - 20298617
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| |||||||| | | |||||||| ||| ||| ||||||||||||||||||||| ||||||| |||| ||||  |||||||||||||||    
T  20298526 tcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatctatcaaatgtgggactaaatc 20298617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21085158 - 21085249
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| |||||||| | | |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  21085158 tcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 21085249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21653421 - 21653330
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||| |||||||||||| |||||    ||| |||||||||||||||||||||    
T  21653421 tcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaagagcactatctatccgatgtgggactaaatc 21653330  T

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Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34248171 - 34248080
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| || ||||||||||||||||||    
T  34248171 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatc 34248080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43599405 - 43599319
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  43599405 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 43599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 15711571 - 15711499
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  15711571 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 15711499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14582324 - 14582233
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | ||||| || ||| |||  |||||||||||||||||||| |||| || |||||||||  |||||||||||||||    
T  14582324 tcatccttacaaaatcagtttgtacggtgagaagtggctcctctttataaactcttctcaagtatcatatttatcaaatgtgggactaaatc 14582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21653898 - 21653807
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||| |||||||| ||| |||||    ||| |||||||||||||||||||||    
T  21653898 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttttctcaagagcactatctatccgatgtgggactaaatc 21653807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23027838 - 23027929
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| |||| |||| ||| |||||||| ||| ||| |||||||||||||| |||||| ||||| || ||| ||||| |||||||||||||||    
T  23027838 tcattcttaaaaaaccggcttgtaaggtgaggagtgcctcctctttataagctcttctcaagagttctatctatcctatgtgggactaaatc 23027929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34248453 - 34248362
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| || || |||||||||||||||    
T  34248453 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtgggactaaatc 34248362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35908772 - 35908681
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| ||| ||||||||||||||||| |||| ||  ||| || ||||||||||||||||||    
T  35908772 tcatccttacaaaaccggcttgtacggtgaggagtgccttctctttataaactcttctcaagtatcctatctacccgatgtgggactaaatc 35908681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8559675 - 8559589
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  8559675 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 8559589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 10989251 - 10989337
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  10989251 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 10989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15011039 - 15011125
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  15011039 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 15011125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35561760 - 35561674
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| |||  || |||| ||| | | ||||||||||||||||||||| |||||||  ||| ||||||||||||||||    
T  35561760 tcatccttacaaaaccggcatgcaaggtgaggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggact 35561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42228865 - 42228779
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  42228865 tcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 42228779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36997260 - 36997172
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaa 89  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| || || ||||||||||||    
T  36997260 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtagtatctacccaatgtgggactaa 36997172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 38287779 - 38287838
Alignment:
Q  33 agtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| |||||||||||||||||||  |||||||  ||| |||||||||||||||||||||    
T  38287779 agtatctcctctttataaactcttatcaagaatcctatctatccgatgtgggactaaatc 38287838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 8276606 - 8276552
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| |||||||  ||| ||||| |||||||||||||||    
T  8276606 ctcctctttataaactcttctcaagaatcctatctatccaatgtgggactaaatc 8276552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10989044 - 10989106
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| |||||    
T  10989044 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 10989106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 20760670 - 20760756
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | |||| |||||||||||||||| ||||| |  | | ||||||||||||||||    
T  20760670 tcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccgatgtgggact 20760756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3183921 - 3184001
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgt 81  Q
    ||||| |||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||    
T  3183921 tcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcctatctatccgatgt 3184001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 18464145 - 18464073
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| || ||| ||| ||| ||||||||||||||||| |||||||  ||| |||| ||||||||||||||||    
T  18464145 ttgtacggtgaggagtgccttctctttataaactcttctcaagaatcctatctatctgatgtgggactaaatc 18464073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 40902405 - 40902465
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| |||||    
T  40902405 atccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 40902465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 9982961 - 9983132
Alignment:
Q  103 aaattggcccctcaaaatttttggtatttgcaaattaacccttt-tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaa 201  Q
    |||||| |||||||||||||||   | || |||||| |||| |  ||||||||| |||| ||| ||| ||||  | |||||| |||||||  ||||||||    
T  9982961 aaattgacccctcaaaatttttaaaaattacaaattgacccataatttcaatttccaaatttggcccaaaaacattaaaatttataaaagttgcccaaaa 9983060  T
Q  202 ataataacaatgaaatgatttattactctaaccaaccaacaatatttagaaatgaagtgaattcaattgaat 273  Q
    || || ||||||||||  ||||||  || | |||| |||  ||||||| ||||||| | |||||||||||||    
T  9983061 atgatgacaatgaaattttttatttttccatccaaacaaggatatttaaaaatgaaatcaattcaattgaat 9983132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 20232447 - 20232498
Alignment:
Q  41 ctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||| |||||||   || |||||||||||||||||||||    
T  20232447 ctctttataaactcttctcaagaatctcatctatccgatgtgggactaaatc 20232498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 5720913 - 5720963
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  5720913 cctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 5720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 8605548 - 8605494
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||| |||||||||||| |||||||  ||||||||||| ||| ||||||||    
T  8605548 cctcctctatataaactcttctcaagaatcctatttatccgacgtgagactaaat 8605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15010831 - 15010917
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||||| |||| ||| |||||||| ||| | | ||||||||||||||| ||||| ||||| |  | | ||||||||||||||||    
T  15010831 tcatccttataaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgatgtgggact 15010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16454645 - 16454731
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| |||||||  |||| |  ||| ||||||||||| ||||    
T  16454645 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttcttaagagtcttatctatccgatgtgagact 16454731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35561552 - 35561490
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| ||  |||| ||| | ||||||||||||||||||||||| |||||    
T  35561552 tcatccttacaaaaccggcttacaaggtgaggattacctcctctttataaactcttctcaaga 35561490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36039804 - 36039858
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||| ||| ||||||| | |||||||||||||||||    
T  36039804 tcatccttacaaaaccggcttgtgaggtgagtagtgcatcctctttataaactct 36039858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43984326 - 43984380
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| ||||| || ||| ||| |||||||||||||||||||    
T  43984326 tcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaactct 43984380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 39587874 - 39587959
Alignment:
Q  7 ttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||| || ||||| ||| ||| | ||||||||||||||||||| | |||||  |||  ||| ||||||||||||||||    
T  39587874 ttacaaaaccggcttataaggtgaggagtgcttcctctttataaactcttctctagaatcctatccatctgatgtgggactaaatc 39587959  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 28324427 - 28324359
Alignment:
Q  106 ttggcccctcaaaatttttggtatttgcaaatt-aacccttttttcaattttcaaagttgacccgaaaa 173  Q
    ||||||||||||||||||||  ||||||||||| | ||||  ||||| |||||||| ||||||| ||||    
T  28324427 ttggcccctcaaaatttttgaaatttgcaaattgacccctaatttcatttttcaaatttgacccaaaaa 28324359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 33377022 - 33376954
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || ||||||||    
T  33377022 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaa 33376954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38287974 - 38288030
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttc 57  Q
    |||||||||||||| | | ||||| || |||||||  ||||||||||||||||||||    
T  38287974 tcatccttacaaaaccagcttgtacggtgagtagtgtctcctctttataaactcttc 38288030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39588094 - 39588146
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaact 53  Q
    |||||||||||||| ||| || ||||| ||| ||| |||||||||||||||||    
T  39588094 tcatccttacaaaaccggcttataaggtgaggagtgcctcctctttataaact 39588146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19937053 - 19937144
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  19937053 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaattctatctatccgatgtgggactaaatc 19937144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17419881 - 17419790
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  17419881 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 17419790  T

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Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 2697344 - 2697432
Alignment:
Q  4 tccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  2697344 tccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 2697432  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4022135 - 4022226
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  || |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  4022135 tcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 4022226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17295072 - 17294981
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  17295072 tcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 17294981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31305805 - 31305714
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  31305805 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatcggatgtgggactaaatc 31305714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38474377 - 38474286
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  |||||||  ||| |||||||||| ||||||||||    
T  38474377 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagaatcctatctatccgatgtaggactaaatc 38474286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2997066 - 2997152
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||| ||| ||||| ||||||||||||||| ||||||| ||||| || ||| ||||||||||||||||    
T  2997066 tcatccttacaaaaccggcttgtgaggtgagtattacctcctctttatatactcttctcaagagttttatctatccgatgtgggact 2997152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 145 - 273
Target Start/End: Complemental strand, 39588831 - 39588704
Alignment:
Q  145 tttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaat 244  Q
    |||||||| ||||||  ||||||  |||||||||||||| | ||||| ||||||||||||||||||||||||  ||||||||||| | | || ||| |||    
T  39588831 tttttcaactttcaagattgacca-aaaaattcaaaatttacaaaagtagcccaaaaataataacaatgaaactatttattactccatctaaacaaaaat 39588733  T
Q  245 atttagaaatgaagtgaattcaattgaat 273  Q
    ||||| || | |||  |||||||||||||    
T  39588732 atttaaaattaaagacaattcaattgaat 39588704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51722348 - 51722256
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctct-ttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| |||||||| ||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  51722348 tcatccttacaaaaccggcttgtacggtgaggagtgcctcctctcttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 51722256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8520103 - 8520194
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| |||||||| ||| |||||||| ||| ||| |||| |||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  8520103 tcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 8520194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18585132 - 18585041
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  || ||||| || ||| ||| ||||||||||||||| ||||| |||||||  ||| |||||||||||||||||||||    
T  18585132 tcatccttacaaaactggcttgtacggtgaggagtccctcctctttataaaatcttctcaagaatcctatctatccgatgtgggactaaatc 18585041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28509397 - 28509488
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || |   ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  28509397 tcatccttacaaaaccggcttgtacggtggagagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 28509488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 43423373 - 43423282
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  || |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||| ||||||    
T  43423373 tcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgggaataaatc 43423282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 45858749 - 45858658
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||| |||| ||  ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  45858749 tcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 45858658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 19653017 - 19652947
Alignment:
Q  145 tttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||| |||||||||||||||| || |||||||||||||| ||||||  ||||||||||| |||||||||||    
T  19653017 ttttccaattttcaaagttgatccaaaaaattcaaaatttataaaactagcccaaaaatcataacaatgaa 19652947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 39649094 - 39649180
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  39649094 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 39649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 40664303 - 40664213
Alignment:
Q  2 catccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||  ||||| |  ||| || |||||||| |||||||||    
T  40664303 catccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgagactaaatc 40664213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12287942 - 12287851
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | ||||| || ||| ||| |||||||||||||| |||||  |||||||  ||| |||||||||||||||||||||    
T  12287942 tcatccttacaaaaccagcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccgatgtgggactaaatc 12287851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20735616 - 20735525
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||| ||||| ||||| |  ||| |||| ||||||||| ||||||    
T  20735616 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagtactatctatctgatgtgggattaaatc 20735525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27958057 - 27958148
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| ||||  ||| |||||||||||    
T  27958057 tcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatctaatgcgggactaaatc 27958148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29228542 - 29228451
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||||||||| |||||||    
T  29228542 tcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggtctaaatc 29228451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33879788 - 33879879
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | |||||||| ||| |||  |||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  33879788 tcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagtgctatatatctgatgtgggactaaatc 33879879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33964467 - 33964376
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | |||||||| ||| |||  |||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  33964467 tcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagtgctatatatctgatgtgggactaaatc 33964376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 45443310 - 45443223
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||| ||| ||||| ||  || ||| |||| |||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  45443310 ccttacaaaaccggcttgtacggttaggagtgcctcatctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 45443223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 1902400 - 1902509
Alignment:
Q  102 caaattggcccctcaaaatttttggtatttgcaaattaacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaa 201  Q
    |||||||||||||| |||||||    ||||||||||| |||| |||| ||| ||||||||||| ||| |||| ||||||||| |||||||   |||| ||    
T  1902400 caaattggcccctctaaattttaaaaatttgcaaattgacccctttt-caaatttcaaagttggccccaaaatttcaaaatttataaaagttacccataa 1902498  T
Q  202 ataataacaat 212  Q
    |||||||||||    
T  1902499 ataataacaat 1902509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12233377 - 12233315
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    ||||||||| |||| ||| |||||||| ||| ||||||||||||||||||||||||| |||||    
T  12233377 tcatccttataaaaccggcttgtaaggtgaggagtacctcctctttataaactcttctcaaga 12233315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 40642823 - 40642877
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  40642823 ctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 40642877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 41822264 - 41822154
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatat 246  Q
    |||||||||||||| ||||||  ||||| | |||||| |||||||  |||||||||| || ||||||||||  |||||||||| | |||| ||| | |||    
T  41822264 tttcaattttcaaatttgacctaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttattactccatccaaacaaaagtat 41822165  T
Q  247 ttagaaatgaa 257  Q
    | |||||||||    
T  41822164 tgagaaatgaa 41822154  T

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Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43361562 - 43361648
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  43361562 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 43361648  T

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Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 52846859 - 52846945
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  52846859 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 52846945  T

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Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21538944 - 21539029
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggac 86  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||| ||||| ||||| |  |||||||||||| ||||||    
T  21538944 tcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttatttatccgatatgggac 21539029  T

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Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 40521542 - 40521595
Alignment:
Q  40 cctctttataaactcttcccaagaattatatttatccgatgtgggactaaatca 93  Q
    |||||||||||||||||| |||||||  ||| ||||||||||||||||||||||    
T  40521542 cctctttataaactcttctcaagaatcttatctatccgatgtgggactaaatca 40521595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 36326998 - 36326938
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||    
T  36326998 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaga 36326938  T

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Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 254
Target Start/End: Original strand, 44571508 - 44571656
Alignment:
Q  106 ttggcccctcaaaatttttggtatttgcaaattaacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataa 205  Q
    ||||||||||||||||||||  |||| |||||| |||| |  |||||||||| || ||| ||| ||||| | |||||| | |||||  |||||||||| |    
T  44571508 ttggcccctcaaaatttttgcaatttacaaattgacccctaattcaattttctaatttggcccaaaaaaattaaaatttacaaaagttgcccaaaaatga 44571607  T
Q  206 taacaatgaaatgatttattactctaaccaaccaacaatatttagaaat 254  Q
    |  |||||||||  |||||| ||| | |||| ||| |||||| ||||||    
T  44571608 tggcaatgaaattttttatttctccatccaaacaaaaatattgagaaat 44571656  T

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Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4187524 - 4187614
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||| ||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  4187524 tcatccatacaaaaccggcttgtacggtgaggagtgcctcctctt-ataaactcttctcaagattcctatctatccgatgtgggactaaatc 4187614  T

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Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20735849 - 20735762
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggacta 88  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||| | | ||| |  ||| |||| ||||||||||||    
T  20735849 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctactcgagagtcttatctatctgatgtgggacta 20735762  T

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Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 29228733 - 29228678
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  29228733 cctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 29228678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29383633 - 29383724
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  || ||||| ||  || ||| ||||| ||||||||||||||| |||| ||  ||| |||||||||||||||||||||    
T  29383633 tcatccttacaaaactggcttgtacggtaaggagtgcctccgctttataaactcttctcaagtatcttatctatccgatgtgggactaaatc 29383724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37600966 - 37600875
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| || ||||| ||| ||| || |||||||||||||||||| ||||| |  ||| ||||| ||| |||||||||||    
T  37600966 tcatccttacaaaaccggcttataaggtgaggagtgccgcctctttataaactcttctcaagagtgttatctatccaatgagggactaaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15392119 - 15392033
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||| | ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  15392119 tcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 15392033  T

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Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22892443 - 22892497
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| |||||||| ||| ||| ||| |||||||||||||||||||    
T  22892443 tcatccttacaaaaccggattgtgaggtgaggagtgcctcctctttataaactct 22892497  T

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Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29273235 - 29273321
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||| ||||||||||||||| ||||| |  | | ||||||||||||||||    
T  29273235 tcatccttacaaaaccggcttgtaaggtgaggattgcctcccctttataaactcttctcaagagtcttgtctatccgatgtgggact 29273321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43361767 - 43361853
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | | ||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  43361767 tcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 43361853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 33562145 - 33562226
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaa 90  Q
    |||||| ||| ||||| || ||| ||| |||||||||||||| |||||  |||||||  ||| |||||||||||||||||||    
T  33562145 acaaaaccggcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccgatgtgggactaaa 33562226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 6470458 - 6470350
Alignment:
Q  110 cccctcaaaatttttggtatttgcaaatt-aacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataa 208  Q
    ||||||||||||||||  |||| |||||| | ||||  |||||| ||||||| ||||||| ||||| | |||||| |||||||  |||||||||| || |    
T  6470458 cccctcaaaatttttgaaatttacaaattgacccctaatttcaaatttcaaatttgacccaaaaaagtaaaaatttataaaagttgcccaaaaatgatga 6470359  T
Q  209 caatgaaat 217  Q
    || ||||||    
T  6470358 cagtgaaat 6470350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28950928 - 28950992
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaat 65  Q
    ||||| ||||||||  |||||||| || ||| |||| |||||||||||||||||||| |||||||    
T  28950928 tcatctttacaaaattggattgtacggtgagaagtatctcctctttataaactcttctcaagaat 28950992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36332206 - 36332142
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaat 65  Q
    |||||||||||||| ||| |||||||| ||| ||| | ||||||||||||||||||  |||||||    
T  36332206 tcatccttacaaaaccggcttgtaaggtgaggagtgcatcctctttataaactcttaacaagaat 36332142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45403534 - 45403478
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttc 57  Q
    |||||||||||||| | | |||||||| ||| ||| |||||||||||||||||||||    
T  45403534 tcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttc 45403478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2104270 - 2104361
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||| |||||||   ||||  |  ||| || ||||||||||||||||||    
T  2104270 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttacaaactctgatcaagcttcctatctaaccgatgtgggactaaatc 2104361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30604470 - 30604561
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| |||||||   || |||  |||||||||||||||| ||| ||||| |  ||| |||||||||||||||||||||    
T  30604470 tcatccatacaaaaccggcttgtaagataaggagtgtctcctctttataaactattctcaagattcctatctatccgatgtgggactaaatc 30604561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 463093 - 463147
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| ||| | |||||||||||||||||    
T  463093 tcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 463147  T

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Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11149433 - 11149487
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| ||| | |||||||||||||||||    
T  11149433 tcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 11149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15391913 - 15391831
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgg 83  Q
    ||||||||||||||  || |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||    
T  15391913 tcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgg 15391831  T

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Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 20208137 - 20208183
Alignment:
Q  46 tataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||  ||||||| |||| |||||||||||||||||||||    
T  20208137 tataaactcttttcaagaatcatatctatccgatgtgggactaaatc 20208183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 20208436 - 20208482
Alignment:
Q  46 tataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||  ||||||| |||| |||||||||||||||||||||    
T  20208436 tataaactcttttcaagaatcatatctatccgatgtgggactaaatc 20208482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 31411571 - 31411661
Alignment:
Q  2 catccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| ||||||| ||| ||||| || |||  || |||||| |||||||||||||  |||||||  ||| |||| ||||||||||||||||    
T  31411571 catccatacaaaaccggcttgtacggtgagatgtgcctcctttttataaactcttttcaagaatcctatctatctgatgtgggactaaatc 31411661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33342288 - 33342350
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| |||   ||||||||||||||| ||||||| |||||    
T  33342288 tcatccttacaaaaccggcttgtaaggtgaggtttacctcctctttatatactcttctcaaga 33342350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48558331 - 48558417
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | | ||||||||||| ||||||| ||||| |  ||| |||||||| |||||||    
T  48558331 tcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttatatactcttctcaagagtcttatctatccgatatgggact 48558417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 32647656 - 32647761
Alignment:
Q  153 ttttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa-atgatttattactctaaccaaccaacaatatttaga 251  Q
    |||||||| ||| ||  ||||| | |||||| |||||||  ||||||||||||| ||||||||  || |||||||||| | |||| ||| | ||||||||    
T  32647656 ttttcaaatttggccaaaaaaaattaaaatttataaaagttgcccaaaaataatgacaatgaatttgttttattactccatccaaacaaaagtatttaga 32647755  T
Q  252 aatgaa 257  Q
    ||||||    
T  32647756 aatgaa 32647761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 946740 - 946807
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||||||| ||||||| |||||| |||||||  | |||||||| || ||||||||    
T  946740 tttcaattttcaaatttgacccaaaaaatt-aaaatttataaaagttgtccaaaaatgatgacaatgaa 946807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15392198 - 15392142
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttc 57  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| |||||||    
T  15392198 tcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttatatactcttc 15392142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 7e-23; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 257277 - 257368
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| | |||||| ||| ||| ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  257277 tcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatctatccgatgtgggactaaatc 257368  T

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Target: chr7; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36092402 - 36092493
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| |||||||||||| |||||||||||| ||||||| |||| ||||| |||||||||||||||    
T  36092402 tcatccttacaaaaccggcttgtaaggtgaggagtacctcctctctataaactcttctcaagaatcatatctatccaatgtgggactaaatc 36092493  T

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Target: chr7; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 43384290 - 43384381
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  43384290 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 43384381  T

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Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1661201 - 1661292
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| ||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||    
T  1661201 tcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatctatccgatgtgggactaaatc 1661292  T

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Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43383956 - 43384045
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaa 90  Q
    |||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||  ||||| |  ||| |||||||||||||||||||    
T  43383956 tcatccttacaaaaccggtttgtaaggggagtagtgcctcctctttataaactctttgcaagactcctatctatccgatgtgggactaaa 43384045  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27585350 - 27585259
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| |||||| |||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  27585350 tcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 27585259  T

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Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28910126 - 28910035
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||||||||| |  ||| ||||  |||||||||||||||    
T  28910126 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttcccaagagtcctatctatcttatgtgggactaaatc 28910035  T

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Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34748872 - 34748781
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| | | ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  34748872 tcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 34748781  T

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Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36092609 - 36092699
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| | | |||||||| ||| ||| |||||||| |||||||||||| |||||||  ||| ||||||||||||||||||||    
T  36092609 tcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatctatccgatgtgggactaaat 36092699  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1663614 - 1663706
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctcttt-ataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||| ||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  1663614 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 1663706  T

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Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7135253 - 7135344
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| |||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||||||| |||||||||    
T  7135253 tcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgtgactaaatc 7135344  T

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Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36495983 - 36495892
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||| ||| |||||||  ||| |||||||||||||||||||||    
T  36495983 tcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagaatcctatctatccgatgtgggactaaatc 36495892  T

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Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37272055 - 37272146
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| || ||||||||||||||||||    
T  37272055 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatc 37272146  T

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Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37530933 - 37531024
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||||| ||| |||||||  ||| ||| ||||||||||||||||||||| |||||||  ||| ||||||| |||||||||||||    
T  37530933 tcatccttgcaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgacgtgggactaaatc 37531024  T

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Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41670677 - 41670586
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||| |||||||||||||||||    
T  41670677 tcatccttacaaaaccagtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctattcgatgtgggactaaatc 41670586  T

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Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36270480 - 36270571
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||  ||| ||||| || ||| |||  ||||||||||||||||| || |||||||  ||| |||||||||||||||||||||    
T  36270480 tcatccttacaaagccggcttgtacggtgaggagtgtctcctctttataaactcgtctcaagaatcctatctatccgatgtgggactaaatc 36270571  T

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Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 39550024 - 39550079
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  39550024 cctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 39550079  T

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Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40121628 - 40121719
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| |||||||| |||||||||||| ||||| |  ||| |||||||||||| ||||||||    
T  40121628 tcatccttacaaaaccggcttgtagggtgaggagtgcctcctctctataaactcttctcaagagtactatctatccgatgtggaactaaatc 40121719  T

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Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47346104 - 47346195
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  47346104 tcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatctgatgtgggactaaatc 47346195  T

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Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47346333 - 47346424
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||||| |  ||| | |||||||||||||||||||    
T  47346333 tcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctttccgatgtgggactaaatc 47346424  T

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Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6783132 - 6783046
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||| ||||    
T  6783132 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagact 6783046  T

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Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9378887 - 9378801
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| ||||||||| || | | ||||||||||||||||||||| ||||| |  ||| ||| ||||||||||||    
T  9378887 tcatccttacaaaaccggcttgtaaggcaaggattgcctcctctttataaactcttctcaagagtcttatctattcgatgtgggact 9378801  T

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Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36237896 - 36237810
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| ||||| ||||||||||    
T  36237896 tcatccttacaaaaccggcttgtaaggagaggagtgcctcctctttataaactcttatcaagagtcctatgtatccaatgtgggact 36237810  T

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Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36495760 - 36495670
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||| ||||||| ||| || || || ||| ||| ||||||||||||||||| ||| |||||||  ||| ||||||||||||||||||||    
T  36495760 tcatccctacaaaaccggcttctacggtgaggagtgcctcctctttataaactattctcaagaatcctatctatccgatgtgggactaaat 36495670  T

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Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 33909193 - 33909140
Alignment:
Q  39 tcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  33909193 tcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 33909140  T

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Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 22206295 - 22206379
Alignment:
Q  8 tacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||| ||| ||||| || ||| ||| ||||||||||||||||| ||| |||||||  ||| ||| |||||||||||||||||    
T  22206295 tacaaaatcggtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatctattcgatgtgggactaaatc 22206379  T

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Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 22228444 - 22228360
Alignment:
Q  8 tacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||| ||| ||||| || ||| ||| ||||||||||||||||| ||| |||||||  ||| ||| |||||||||||||||||    
T  22228444 tacaaaatcggtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatctattcgatgtgggactaaatc 22228360  T

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Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 9379091 - 9379012
Alignment:
Q  4 tccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgg 83  Q
    ||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||    
T  9379091 tccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgg 9379012  T

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Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12518180 - 12518271
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| || ||||||||||||| ||| || ||||||||||||||||   ||||  || ||| || || |||||||||||||||    
T  12518180 tcatccttacaaaaccgaattgtaaggcgaggagtgccccctctttataaactctgatcaagctttctatctaaccaatgtgggactaaatc 12518271  T

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Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34914930 - 34915021
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| |||| ||||| |||||||||| |||||||  | | |||||||||||||||||||||    
T  34914930 tcatccctacaaaaccggcttgtacggtgaggagtgcctcatctttgtaaactcttctcaagaatcctgtctatccgatgtgggactaaatc 34915021  T

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Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 37755984 - 37756039
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  37755984 cctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 37756039  T

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Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 37756210 - 37756265
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  37756210 cctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 37756265  T

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Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 37761958 - 37762013
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  37761958 cctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 37762013  T

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Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 43167903 - 43167994
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |  ||||| ||| | | ||||||||||||||||||||| ||||| |  ||| |||||||| ||||||||||||    
T  43167903 tcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagtgctatctatccgatttgggactaaatc 43167994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 43288354 - 43288267
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||| |||||||||||  ||| ||| ||||||||||||||||||||  ||||| |  ||| || ||||||||||| ||||||    
T  43288354 ccttacaaaaccggattgtaagatgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggagtaaatc 43288267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12578470 - 12578524
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| || ||||||||||||| ||| |||||||||| ||||||||    
T  12578470 tcatccttacaaaatcgaattgtaaggcgaggagtgcctcctctttctaaactct 12578524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 14790395 - 14790496
Alignment:
Q  102 caaattggcccctcaaaatttttggtatttgcaaatt-aacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaa 200  Q
    ||||||| ||||||||||||||||  |||| |||||| | ||||  |||||||||||||| ||| ||| ||||||| |||||| |||||||  |||||||    
T  14790395 caaattgacccctcaaaatttttgaaatttacaaattgacccctaatttcaattttcaaatttggcccaaaaaatt-aaaatttataaaagttgcccaaa 14790493  T
Q  201 aat 203  Q
    |||    
T  14790494 aat 14790496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21557110 - 21557024
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||| ||||||||  ||||||||||| ||| ||| || | |||||||||||||||  ||||| || ||| ||||||||||||||||    
T  21557110 tcatctttacaaaactggattgtaaggtgagaagttccccatctttataaactcttatcaagagttctatctatccgatgtgggact 21557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 22686780 - 22686834
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||  |||||||  |||||||||||||||||| ||||||    
T  22686780 ctcctctttataaactcttttcaagaatcctatttatccgatgtgggattaaatc 22686834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31374859 - 31374773
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||| | |  ||| |||||||||| |||||    
T  31374859 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaatagtcttatctatccgatgtaggact 31374773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36238099 - 36238013
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| ||  | ||||||||||||||||||  ||||| | |||| ||||| ||||||||||    
T  36238099 tcatccttacaaaaccggcttgtaaggagaggagagcatcctctttataaactcttaacaagagtcatatgtatccaatgtgggact 36238013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 20296347 - 20296266
Alignment:
Q  11 aaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| ||| ||||| |||||| |||  |||||||||||||||||||| |||||||  | | ||||| |||||||||||||||    
T  20296347 aaaaccggcttgtatggcgaggagtgtctcctctttataaactcttctcaagaatcctctctatccaatgtgggactaaatc 20296266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 254
Target Start/End: Complemental strand, 30080537 - 30080392
Alignment:
Q  110 cccctcaaaatttttggtatttgcaaattaac-ccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataa 208  Q
    ||||||||| ||||||  |||| |||||| || |||  |||||||||| ||| ||| ||| ||||| | |||||| |||||||   ||||||||| ||||    
T  30080537 cccctcaaattttttgaaatttacaaattgactcctaatttcaattttaaaatttggcccaaaaaaattaaaatttataaaagtttcccaaaaatgataa 30080438  T
Q  209 caatgaaatgatttattactctaaccaaccaacaatatttagaaat 254  Q
    |||||||||  |||||||||| | |||| ||| | |||| ||||||    
T  30080437 caatgaaattttttattactccatccaaacaaaagtattgagaaat 30080392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 40121957 - 40122038
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaa 90  Q
    |||||| ||| ||||| || ||| |||  |||||||||||||||||||| ||||| |  ||| |||||||||||||||||||    
T  40121957 acaaaaccggcttgtagggtgaggagtgtctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaa 40122038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 43288624 - 43288571
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactctt 56  Q
    |||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||    
T  43288624 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 43288571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14991519 - 14991583
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaat 65  Q
    |||||||||||||| ||  ||||| || ||| ||| ||||||||||||||||||||| |||||||    
T  14991519 tcatccttacaaaatcgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaat 14991583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15421130 - 15421194
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaat 65  Q
    |||||||||||||| ||  ||||| || ||| ||| ||||||||||||||||||||| |||||||    
T  15421130 tcatccttacaaaatcgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaat 15421194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19843577 - 19843487
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| ||| ||||||||||| ||||||||| ||| |||  ||| |||||||| ||||||| ||||    
T  19843577 tcatccttacaaaatcggcttgtacggtgaggagtgcctcctcttta-aaactcttctcaataatcctatctatccgatttgggacttaatc 19843487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19843801 - 19843710
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||  ||||| || ||| ||| | | ||||||||||||||||| |||||||  ||| |||| ||| ||||||||||||    
T  19843801 tcatccttacaaaatcgtcttgtacggtgaggagtgctttctctttataaactcttctcaagaatcctatctatctgatttgggactaaatc 19843710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29780241 - 29780150
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||| |||| ||  |||||||| ||| |||  |||||||||||||||||||| ||||| | |||| |||  |||||| |||||||||    
T  29780241 tcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtcatatctatttgatgtgagactaaatc 29780150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36270707 - 36270798
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||  | ||| ||| |||||||||||||||||| |  |||||||  ||| ||||| ||||||||| |||||    
T  36270707 tcatccttacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcctgtcaagaatcctatctatccaatgtgggacaaaatc 36270798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 37460660 - 37460582
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttatta 226  Q
    |||||||||||||| ||| ||| ||||||| |||||| |||||||  |||||||||| || ||||||||||  |||||||    
T  37460660 tttcaattttcaaatttggcccaaaaaatt-aaaatttataaaagttgcccaaaaatgatgacaatgaaattttttatta 37460582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 44314354 - 44314405
Alignment:
Q  41 ctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||| |||||||   || |||||||||||||||||||||    
T  44314354 ctctttataaactcttctcaagaatctcatctatccgatgtgggactaaatc 44314405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 6782912 - 6782834
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||| ||||    
T  6782912 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagact 6782834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23396703 - 23396617
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | |||| |||||||| ||||||| ||||| |  ||| |||||| |||||||||    
T  23396703 tcatccttacaaaaccggcttgtaaggtgaggattgcctcatctttatatactcttctcaagagtcttatctatccgttgtgggact 23396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27729484 - 27729579
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaat----tatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||| | | | || |||||||||||||||||||| |||    | ||| |||||||||||||||||||||    
T  27729484 tcatccttacaaaatcggcttgtacggtgaggattgcatcatctttataaactcttcccaataatcctatctatctatccgatgtgggactaaatc 27729579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 29252662 - 29252584
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||| ||||||||    
T  29252662 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgacgtgggact 29252584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 35866649 - 35866735
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||  ||||| | || ||||| |||||||||||  ||||| |  ||| ||||||||||||||||    
T  35866649 tcatccttacaaaaccggcttgtaagttgagtattgccccctctatataaactcttatcaagagtcttatctatccgatgtgggact 35866735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 39808607 - 39808693
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||| ||||||  || |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  39808607 tcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 39808693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40703421 - 40703475
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||| ||| ||| ||| |||||||||||||||||||    
T  40703421 tcatccttacaaaaccggcttgtgaggtgaggagtgcctcctctttataaactct 40703475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 2411670 - 2411751
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattact 228  Q
    |||||||||||||| ||||||| ||||| | |||||| |||||||  | |||||||| || |||||||| |  |||||||||    
T  2411670 tttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattact 2411751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 45181901 - 45181836
Alignment:
Q  193 agcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatatttagaaatgaag 258  Q
    |||||||||||  |||||||||| |  |||||||||||| |||| ||| || ||||||||||||||    
T  45181901 agcccaaaaattttaacaatgaatttttttattactctatccaaacaaaaagatttagaaatgaag 45181836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 30629417 - 30629485
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || ||||||||    
T  30629417 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaa 30629485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 35456163 - 35456231
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || ||||||||    
T  35456163 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaa 35456231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3976481 - 3976572
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  3976481 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatattatctatccgatgtgggactaaatc 3976572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23054420 - 23054329
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||  |||||||| ||| ||| ||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||    
T  23054420 tcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttatatctatctgatgtgggactaaatc 23054329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 39596716 - 39596805
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaa 90  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||  ||||| || ||| || ||||||||||||||||    
T  39596716 tcatcctcacaaaaccggattgtaaggcgaggagtgcctcctctttataaactcttatcaagagttctatatagccgatgtgggactaaa 39596805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10862068 - 10862159
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||  ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  10862068 tcatccttacaaaaccggcttgtacggtgatgagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 10862159  T

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Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11969146 - 11969055
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||| |||||||||||||    
T  11969146 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgacgtgggactaaatc 11969055  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21213895 - 21213986
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||| |||||||||||||||    
T  21213895 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccaatgtgggactaaatc 21213986  T

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Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 42768344 - 42768432
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||||||    
T  42768344 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt--tatctatccgatgtgggactaaat 42768432  T

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Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 43195878 - 43195787
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  43195878 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 43195787  T

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Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 33532753 - 33532837
Alignment:
Q  8 tacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  33532753 tacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 33532837  T

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Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3977013 - 3977104
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||||   ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  3977013 tcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 3977104  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 6183376 - 6183467
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| |||  |||||||||||||||||||| ||||| |  ||| |||||||||||||| ||||||    
T  6183376 tcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatctatccgatgtgggattaaatc 6183467  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21214211 - 21214302
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||  |||||||||||||||    
T  21214211 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctaatgtgggactaaatc 21214302  T

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Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25441790 - 25441699
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| || |||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  25441790 tcatccttacaaaaccggcttgtaaggtgaggagtgccccctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 25441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 883611 - 883697
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  883611 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 883697  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 27545126 - 27545211
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggac 86  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| |||||||||||||||    
T  27545126 tcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggac 27545211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 44205418 - 44205301
Alignment:
Q  112 cctcaaaatttttggtatttgcaaattaacccttt-tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataaca 210  Q
    ||||||||||||||  |||| |||||| |||| || |||||||||| ||| ||| ||| ||||| | |||||| |||||||  | |||||||||||||||    
T  44205418 cctcaaaatttttgaaatttacaaattgaccccttatttcaattttaaaatttggcccaaaaaaattaaaatttataaaagttgtccaaaaataataaca 44205319  T
Q  211 atgaaatgatttattact 228  Q
    |||||||  |||||||||    
T  44205318 atgaaattttttattact 44205301  T

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Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 43169333 - 43169245
Alignment:
Q  4 tccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||  || ||| |||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  43169333 tccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 43169245  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 4506082 - 4506141
Alignment:
Q  33 agtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| |||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  4506082 agtatctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 4506141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7877938 - 7877847
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| |||  |||||||||||||||||||| | ||| |  ||| |||||||||| ||||||||||    
T  7877938 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcgagagtgctatctatccgatgtaggactaaatc 7877847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15962167 - 15962258
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||| ||| ||||| |  ||| |||||||||||||||||||||    
T  15962167 tcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagattcctatctatccgatgtgggactaaatc 15962258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3435496 - 3435582
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | |||||||| |||||||||||| ||||| |  ||| ||||||||||||||||    
T  3435496 tcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatctatccgatgtgggact 3435582  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12431992 - 12431906
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | |  |||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  12431992 tcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 12431906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 14288978 - 14288924
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||    
T  14288978 ctcctctttataaactcttctcaagaatcatatttatccgacatgggactaaatc 14288924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16007071 - 16006985
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | ||||||||||||||| ||||||| ||||| |  | | ||||||||||||||||    
T  16007071 tcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatccgatgtgggact 16006985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17727498 - 17727412
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||| ||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  17727498 tcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtgggact 17727412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 20998999 - 20999085
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  20998999 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 20999085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36161357 - 36161448
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatat-ttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| |||||||||| |||||||||| |||||||  ||| ||||||||||||||||||||||    
T  36161357 tcatccctacaaaaccggcttgtacggtgaggagtgcctcctcttt-taaactcttctcaagaatcctatcttatccgatgtgggactaaatc 36161448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 4342304 - 4342359
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||| |||||| | |||||||| ||| |||||||||||||||||||||    
T  4342304 cctcctctttattaactctcctcaagaattctatctatccgatgtgggactaaatc 4342359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 11349839 - 11349894
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| ||||||   ||| |||||||||||||||||||||    
T  11349839 cctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatc 11349894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11350197 - 11350288
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| || || || ||| ||| ||||||||||||||||||||| ||||||   ||| |||||||| ||||||||||||    
T  11350197 tcatccatacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatatgggactaaatc 11350288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18901874 - 18901965
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| |||||||||  || |||||||| ||  ||| ||||||||||||||||||||  ||||| |  ||| |||||||||||||||||||||    
T  18901874 tcattcttacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactcttttcaagagtcttatctatccgatgtgggactaaatc 18901965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28193345 - 28193436
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| ||| |||| ||| ||||| || ||| ||| |||||| |||||||||||||| |||||||  ||| ||||||||||| |||||||||    
T  28193345 tcatctttaaaaaatcggcttgtacggtgaggagtgcctcctatttataaactcttctcaagaatcctatctatccgatgtgagactaaatc 28193436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28193585 - 28193676
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  |  ||||| || ||| ||| ||||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||    
T  28193585 tcatccttacaaaactgacttgtacggtgaggagtgcctcctctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatc 28193676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 39420791 - 39420700
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| |||||  | ||| ||| ||||||||||||||||||||| ||| | |  ||| |||||||||||||||||||||    
T  39420791 tcatccgtacaaaaccggcttgtactgtgaggagtgcctcctctttataaactcttctcaaaattcctatctatccgatgtgggactaaatc 39420700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 2925009 - 2925079
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaat 217  Q
    |||||||||||||| ||||||| ||||| | |||||| |||||||  |||||||||| || ||||||||||    
T  2925009 tttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaat 2925079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3976163 - 3976256
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagt--agtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| |||   |||  |||||| ||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  3976163 tcatccttacaaaaccggcttgtaaggtgagaggagtgtctcctccttataaactcttctcaagagtactatctatccgatgtgggactaaatc 3976256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 8736156 - 8736046
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatat 246  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| ||  |||||||||  |||||| ||| | |||| ||| |||||    
T  8736156 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatggcaatgaaattttttatttctccatccaaacaaaaatat 8736057  T
Q  247 ttagaaatgaa 257  Q
    | |||||||||    
T  8736056 tgagaaatgaa 8736046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19860131 - 19860045
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| | | | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  19860131 tcatccttacaaaaccggcttgtaaggtgtggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 19860045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34775451 - 34775365
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||| ||||| ||||| |  | | ||||||||||||||||    
T  34775451 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgatgtgggact 34775365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39108182 - 39108096
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| |||||||||||| ||  | |||||||||| |||||||||||  ||||| |  ||| |||| |||||||||||    
T  39108182 tcatccttacaaaatcggattgtaaggtgatgattacctcctctatataaactcttatcaagattcttatatatctgatgtgggact 39108096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 33985988 - 33986069
Alignment:
Q  4 tccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtggga 85  Q
    ||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||    
T  33985988 tccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtggga 33986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 40010067 - 40009982
Alignment:
Q  2 catccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| ||  |||||| ||||| || ||| ||||||||||||||||    
T  40010067 catccttacaaaaccggcttgtaaggtgaggattgcctcctctttctatgctcttctcaagagttttatctatccgatgtgggact 40009982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 41585384 - 41585304
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattact 228  Q
    |||||||||||||| ||| ||| ||||||| |||||| |||||||  |||||||||| ||||||||||| |  |||||||||    
T  41585384 tttcaattttcaaatttggcccaaaaaatt-aaaatttataaaagttgcccaaaaattataacaatgaatttttttattact 41585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 44255992 - 44256073
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattact 228  Q
    |||||||||||||| ||||||| ||||| | |||||| |||||||  |||||||||| || |||||||| |  |||||||||    
T  44255992 tttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattact 44256073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 3271356 - 3271452
Alignment:
Q  178 aaaattgataaaagcagcccaaaaataataacaatgaaatgattt-attactctaaccaaccaacaatatttagaaatgaagtgaattcaattgaat 273  Q
    |||||| ||||||||| |||||||||| | |||||||| |  ||| |||||| || |||  ||| |||||||||||||||||  |||||||||||||    
T  3271356 aaaatttataaaagcaacccaaaaatattcacaatgaattttttttattactttatccacacaaaaatatttagaaatgaaggaaattcaattgaat 3271452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 10861863 - 10861935
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| ||||| || ||||||||||||    
T  10861863 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatatatccaatatgggactaaatc 10861935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17325264 - 17325172
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatca 93  Q
    |||||||||||||| ||| |||||  | ||  ||| ||||||||||||||| |||||  ||||||  ||| |||| |||||||||||||||||    
T  17325264 tcatccttacaaaaccggcttgtacagtgaagagtgcctcctctttataaattcttcttaagaatcctatctatcagatgtgggactaaatca 17325172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30156300 - 30156248
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||| ||| |||||||| ||| ||| |||||||||||||||||||    
T  30156300 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 30156248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 12432180 - 12432113
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  12432180 ttgtaaggtgaggattgcctcctctttataaactcttctcaagattcttatctatccgatgtgggact 12432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 14280338 - 14280283
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| || ||||  ||| ||||| |||||||||||||||    
T  14280338 cctcctctttataaactcttctcatgaatcctatctatccaatgtgggactaaatc 14280283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15961810 - 15961901
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| |||||||||||||||   ||| ||||| |  ||| |||||||||||||||||||||    
T  15961810 tcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaaagattctcaagattcctatctatccgatgtgggactaaatc 15961901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 30166125 - 30166180
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| |||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  30166125 cctcttctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 30166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33985781 - 33985865
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||  ||||||| ||||| |  ||| ||||||||||||||||    
T  33985781 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttat--actcttctcaagagtcttatctatccgatgtgggact 33985865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 884147 - 884065
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |   || ||||||||||||||||    
T  884147 ccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggact 884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 936869 - 936815
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| ||||| |  ||| ||||||||||| |||||||||    
T  936869 ctcctctttataaactcttctcaagattcctatctatccgatgtgagactaaatc 936815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 6986462 - 6986512
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  6986462 cctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 6986512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 10862363 - 10862309
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||  || |||  ||| |||||||||||||||||||||    
T  10862363 ctcctctttataaactcttctaaaaaatcttatctatccgatgtgggactaaatc 10862309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30160421 - 30160367
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||    
T  30160421 tcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactct 30160367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 32810923 - 32810977
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||  |||||||  ||| ||||||||| |||||||||||    
T  32810923 ctcctctttataaactcttatcaagaatcctatctatccgatgcgggactaaatc 32810977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 44266355 - 44266409
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| ||| |||  ||| |||| ||||||||||||||||    
T  44266355 ctcctctttataaactcttctcaaaaatcttatctatctgatgtgggactaaatc 44266409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 1583523 - 1583442
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattact 228  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || |||||||| |  |||||||||    
T  1583523 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattact 1583442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 3092603 - 3092668
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaat 212  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  ||||||||||||| |||||    
T  3092603 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaataatgacaat 3092668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 11141663 - 11141744
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattact 228  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || |||||||| |  |||||||||    
T  11141663 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattact 11141744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 12419895 - 12419846
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  12419895 ctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 12419846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 769389 - 769457
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || ||||||||    
T  769389 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaa 769457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15061275 - 15061327
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaact 53  Q
    |||||||||||||| | | |||||||| ||| ||| |||||||||||||||||    
T  15061275 tcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaact 15061327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 17509184 - 17509112
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||| ||| ||||||||||||||||||||| ||||  |  ||| |||| |||||||| |||||||    
T  17509184 ttgtaaggtgaggagtgcctcctctttataaactcttctcaagggtgctatctatctgatgtggggctaaatc 17509112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 29684103 - 29684043
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| |||||    
T  29684103 atccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaaga 29684043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 33188981 - 33188913
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || ||||||||    
T  33188981 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaa 33188913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8144111 - 8144020
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  8144111 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 8144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24055119 - 24055210
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||| |||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  24055119 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 24055210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 21067068 - 21067158
Alignment:
Q  2 catccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| |||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||| ||||||||||||    
T  21067068 catctttacaaaaccggcttgtaaggggaggagtgcctcctctttataaactcttctcaagaatgctatctatccgatatgggactaaatc 21067158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 21088859 - 21088949
Alignment:
Q  2 catccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| |||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||| ||||||||||||    
T  21088859 catctttacaaaaccggcttgtaaggggaggagtgcctcctctttataaactcttctcaagaatgctatctatccgatatgggactaaatc 21088949  T

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Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19054587 - 19054499
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaa 89  Q
    |||||||||||||| ||| |||||||| ||| ||| |||| |||||||||||||||| ||||| |  ||| ||||||||||||||||||    
T  19054587 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaagagtgttatctatccgatgtgggactaa 19054499  T

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Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10418348 - 10418439
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||||||||||||   ||||| |  ||| |||||||||||||||||||||    
T  10418348 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatctatccgatgtgggactaaatc 10418439  T

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Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 28149887 - 28149802
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggac 86  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||  ||||| || ||| |||||||||||||||    
T  28149887 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatctatccgatgtgggac 28149802  T

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Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1744852 - 1744940
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaa 89  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| ||||| ||||||||||||    
T  1744852 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtactatctatccaatgtgggactaa 1744940  T

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Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12134493 - 12134581
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaa 89  Q
    |||||||||||||| ||| ||||||||  || |||  |||||||||||||||||||| ||||| |  ||| ||||||||||||||||||    
T  12134493 tcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaa 12134581  T

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Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10733448 - 10733539
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| |||  |||||||||||||||||||| ||||| |  ||| | ||| |||||||||||||||    
T  10733448 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtgttatctgtccaatgtgggactaaatc 10733539  T

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Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17096708 - 17096799
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| |||||| |||  |||||||||||||||||||| ||||| |  ||| ||| ||||||| |||||||||    
T  17096708 tcatccttacaaaaccggcttgtacggcgaggagtttctcctctttataaactcttctcaagactcctatctattcgatgtgagactaaatc 17096799  T

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Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 33396365 - 33396310
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  33396365 cctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 33396310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15101121 - 15101207
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  15101121 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 15101207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16877020 - 16877106
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  16877020 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 16877106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 26842795 - 26842723
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| || ||| ||| ||||||||||||||||||||| ||||||   ||| |||||||||||||||||||||    
T  26842795 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatc 26842723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5269283 - 5269369
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||| ||||||||||||||||| ||||| |  ||| ||||||||||| ||||    
T  5269283 tcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtgagact 5269369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 8475487 - 8475597
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatat 246  Q
    |||||||||||||| ||||||| ||||| | |||||| |||||||| | |||||||| || |||||||| |  ||||||||| || |||| ||| |  ||    
T  8475487 tttcaattttcaaatttgacccaaaaaaattaaaatttataaaagctgtccaaaaatgatgacaatgaatttttttattactttatccaaacaaaagaat 8475586  T
Q  247 ttagaaatgaa 257  Q
    | |||||||||    
T  8475587 tgagaaatgaa 8475597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16590278 - 16590192
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||| | ||| | | ||||||||||||||| ||||||||||| |  | | ||||||||||||||||    
T  16590278 tcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggact 16590192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16605102 - 16605188
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||| | ||| | | ||||||||||||||| ||||||||||| |  | | ||||||||||||||||    
T  16605102 tcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggact 16605188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30539329 - 30539239
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| ||| |||||||| ||| |||  |||  ||||||||||||||  ||||| |  ||| ||||||||||||||||||||    
T  30539329 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttataaactcttatcaagagtcttatctatccgatgtgggactaaat 30539239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 26339890 - 26339943
Alignment:
Q  39 tcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  26339890 tcctctttataaactcttctcaagattcttatctatccgatgtgggactaaatc 26339943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11313392 - 11313476
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtggga 85  Q
    ||||||||||||||  || |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||    
T  11313392 tcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtggga 11313476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 21043810 - 21043882
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||| ||| ||| ||||||||||||||||| ||||| |  ||| |||||||| ||||||||||||    
T  21043810 ttgtaaggggaggagtgccttctctttataaactcttctcaagagtgctatctatccgatatgggactaaatc 21043882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 27443551 - 27443635
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaa 89  Q
    |||||||||| ||||||||| || ||| |||   ||||||||||||||||||| |||||||  ||| |||| ||||||| |||||    
T  27443551 ccttacaaaatcggattgtacggtgaggagtgtttcctctttataaactcttctcaagaatcctatctatctgatgtggtactaa 27443635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 8427640 - 8427553
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||| ||  ||||| || ||| ||| |||||||||| |||||||||| |||||||  ||| |||||||||||  ||||||||    
T  8427640 ccttacaaaaccgacttgtacggtgaggagtgcctcctctttctaaactcttctcaagaatcttatatatccgatgtgaaactaaatc 8427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 25184296 - 25184213
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||| |||||||| ||| | | | ||||||||||||||||||  |||||||  ||| ||||||||| |||||||||||    
T  25184296 acaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttatcaagaatcctatctatccgatgcgggactaaatc 25184213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28068429 - 28068520
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| |||||||| | | |||||||| |||||||  ||| |||||||| || |||| ||||| |  ||| |||||||||||||||||||||    
T  28068429 tcatctttacaaaatcagcttgtaaggtgagtagtgtctcgtctttatatacccttctcaagagtgttatctatccgatgtgggactaaatc 28068520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1469055 - 1469001
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||||||| |||  |||||||||||| |||||    
T  1469055 tcatccttacaaaaccggcttgtaaggcgaggagtgtctcctctttatatactct 1469001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 16194077 - 16194027
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggacta 88  Q
    ||||||||||||||||||||  ||||||  ||| |||||||||||||||||    
T  16194077 ctcctctttataaactcttctaaagaatcctatatatccgatgtgggacta 16194027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16876840 - 16876902
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||| ||| |||||    
T  16876840 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaaga 16876902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19712619 - 19712681
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| | | |||||||| ||| | | ||||||||||||||||||||| |||||    
T  19712619 tcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaaga 19712681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24558677 - 24558591
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||||| |||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| |||| |||||||||||    
T  24558677 tcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggact 24558591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 27582124 - 27582170
Alignment:
Q  46 tataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||||    
T  27582124 tataaactcttctcaagaattttatctatccgttgtgggactaaatc 27582170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27914336 - 27914390
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| ||||||||  || ||| |||||||||||||||||||    
T  27914336 tcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactct 27914390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 31885 - 31974
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||  || |||||||  ||| ||| |||| |||||||||||||||  ||||| |  ||| |||||||||| ||||||||||    
T  31885 atccttacaaaactggcttgtaagttgaggagtgcctcgtctttataaactcttatcaagagtcttatctatccgatgttggactaaatc 31974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17147915 - 17147968
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactc 54  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||    
T  17147915 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactc 17147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 1405474 - 1405530
Alignment:
Q  170 aaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttatta 226  Q
    |||| ||||||| | ||||||| ||| ||||| ||||||||||||||| ||||||||    
T  1405474 aaaatttcaaaacttataaaagtagctcaaaattaataacaatgaaattatttatta 1405530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 33396588 - 33396529
Alignment:
Q  32 tagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| ||||||||||||||||||||| ||| |||  ||| |||||||||| ||||||||||    
T  33396588 tagtgcctcctctttataaactcttctcaaaaatcctatctatccgatgt-ggactaaatc 33396529  T

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Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29669373 - 29669464
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  29669373 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 29669464  T

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Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53740276 - 53740185
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  53740276 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 53740185  T

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Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 991298 - 991207
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||| ||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  991298 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaagagtgttatctatccgatgtgggactaaatc 991207  T

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Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15665247 - 15665156
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||| |||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  15665247 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatctatccgatgtgggactaaatc 15665156  T

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Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29669688 - 29669779
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  29669688 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctgatgtgggactaaatc 29669779  T

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Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 45427262 - 45427353
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| | | || |||| ||||||||||||||||    
T  45427262 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtaaaatatatctgatgtgggactaaatc 45427353  T

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Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50858106 - 50858015
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| |||||||| |||||||||| ||||| ||||| |  ||| |||||||||||||||||||||    
T  50858106 tcatccttacaaaaccggcttgtaaggtgaggagtacctcttctttataaaatcttctcaagagtactatctatccgatgtgggactaaatc 50858015  T

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Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51469575 - 51469484
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||| || ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  51469575 tcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 51469484  T

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Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 990641 - 990551
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| ||  |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||||||    
T  990641 tcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgggactaaat 990551  T

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Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5488461 - 5488375
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  5488461 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatttatccgatgtgggact 5488375  T

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Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 43798139 - 43798228
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||| ||| || ||||| ||| ||||||||| ||| ||||||||||| |||||||  ||| |||||||||||||||||||||    
T  43798139 atccttacaaaaccggcttataaggtgaggagtacctccccttaataaactcttctcaagaatcctatatatccgatgtgggactaaatc 43798228  T

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Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36558476 - 36558567
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| | | ||||||||||||||||| ||| | | |||| |||||||||||||||||||||    
T  36558476 tcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatc 36558567  T

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Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 45426946 - 45427037
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||  |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||||||||| |||||||    
T  45426946 tcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtggggctaaatc 45427037  T

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Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51470577 - 51470486
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||  ||||||| ||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  51470577 tcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 51470486  T

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Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53739960 - 53739869
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||  ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||| ||||||||||||    
T  53739960 tcatccttacaaaaccggcttgtaagctgaggagttcctcctctttataaactcttctcaagagtactatctatccgatatgggactaaatc 53739869  T

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Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 147 - 273
Target Start/End: Original strand, 17727769 - 17727894
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatat 246  Q
    |||||||||||||| ||| ||| ||||| | ||| || |||||||  |||||||||| || ||||||||||  ||||||| || | |||| ||| |||||    
T  17727769 tttcaattttcaaatttggccccaaaaaattaaattt-ataaaagttgcccaaaaatgatgacaatgaaattttttattattccatccaaacaagaatat 17727867  T
Q  247 ttagaaatgaagtgaattcaattgaat 273  Q
    ||||||||||||| |||| ||||||||    
T  17727868 ttagaaatgaagtcaatttaattgaat 17727894  T

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Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23018564 - 23018474
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| | |||| ||||||||||| || |||||    
T  23018564 tcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtcatatctatccgatgtgagattaaat 23018474  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 37288884 - 37288970
Alignment:
Q  6 cttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||| ||| ||||| |||||  |||  ||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  37288884 cttacaaaatcggcttgtacggcgaagagtgtctcctttttataaactcttctcaagaatcatatctatccgatgtgggactaaatc 37288970  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43943767 - 43943681
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  43943767 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 43943681  T

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Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43972449 - 43972359
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||||| |||| ||| ||||| |  ||| ||||||||||||||||||||    
T  43972449 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatctatccgatgtgggactaaat 43972359  T

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Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11290263 - 11290172
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| | | ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  11290263 tcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 11290172  T

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Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 22867170 - 22867087
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||| |||||||||||||    
T  22867170 acaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgacgtgggactaaatc 22867087  T

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Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27048418 - 27048509
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||  |  ||| || ||||||||||||||||||    
T  27048418 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcttcctatctaaccgatgtgggactaaatc 27048509  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 46528933 - 46529024
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| |||||||   || ||||||||||| |||||||||    
T  46528933 tcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatccaatctatccgatgtgagactaaatc 46529024  T

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Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 50868023 - 50868114
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| | | ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  50868023 tcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 50868114  T

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Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12016693 - 12016779
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  12016693 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 12016779  T

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Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12016901 - 12016987
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  12016901 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 12016987  T

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Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27634336 - 27634422
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  27634336 tcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 27634422  T

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Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29734655 - 29734565
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||||  |||||||| ||| | |  ||| ||||||||||||||||||||    
T  29734655 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttaataactcttctcaaaagtcctatctatccgatgtgggactaaat 29734565  T

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Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50858419 - 50858331
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||   || ||| ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  50858419 tcatccttacaaaaccggcttgtaag---aggagtgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 50858331  T

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Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52214709 - 52214621
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaa 89  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| || || ||||||||||||    
T  52214709 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtattatctacccaatgtgggactaa 52214621  T

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Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13254477 - 13254386
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| ||||||||| ||| |||||||| ||| ||| |||| |||||||||||||||| ||| | |  ||| ||||| |||||||||||||||    
T  13254477 tcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaactcttctcaatagtcctatctatccaatgtgggactaaatc 13254386  T

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Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 273
Target Start/End: Original strand, 31947893 - 31948056
Alignment:
Q  111 ccctcaaaatttttggtatttgcaaatt-aacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataac 209  Q
    |||||||||||||||  |||| |||||| | ||||  ||| |||||||||| ||||||| ||||| | |||||| |||||||   ||||||||| ||  |    
T  31947893 ccctcaaaatttttgaaatttacaaattgacccctaattttaattttcaaatttgacccaaaaaaattaaaatttataaaagtttcccaaaaatgatgcc 31947992  T
Q  210 aatgaaatgatttattactctaaccaaccaacaatatttagaaatgaagtgaattcaattgaat 273  Q
    | ||||||  |||||||||| | |||| ||| | |||| |||||||||  ||||| ||||||||    
T  31947993 attgaaattttttattactccacccaaacaaaagtattgagaaatgaatggaatttaattgaat 31948056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33912137 - 33912046
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| || ||  | ||| ||| ||||||||||||||||||||| |||| ||  ||| || ||||||||||||||||||    
T  33912137 tcatccttacaaaaccggcttatacagtgaggagtgcctcctctttataaactcttctcaagtatcctatctacccgatgtgggactaaatc 33912046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52827242 - 52827297
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactctt 56  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||    
T  52827242 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 52827297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 56509703 - 56509612
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| |||||||  ||| ||| ||||||||||||||||||||| ||||  |  ||| |||||||||| ||||||||||    
T  56509703 tcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagggtcctatctatccgatgtaggactaaatc 56509612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21497693 - 21497747
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||||||||||||    
T  21497693 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21497747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21498281 - 21498227
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||||||||||||    
T  21498281 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21498625 - 21498539
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | ||||| ||||||||| ||||||| ||||| |  | | ||||||||||||||||    
T  21498625 tcatccttacaaaaccggcttgtaaggtgaggattaccttctctttatatactcttctcaagagtcttgtctatccgatgtgggact 21498539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25753615 - 25753701
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||  ||||| |  | | ||||||||||||||||    
T  25753615 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgggact 25753701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 26941954 - 26941864
Alignment:
Q  2 catccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||| ||| ||||| |  ||| ||| |||||||| |||||||||||| |||| ||  ||| ||| |||||||||||||||||    
T  26941954 catccttacaaaaccggcttgtacgatgaggagtgcctcctctatataaactcttctcaaggatactatctattcgatgtgggactaaatc 26941864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 39110997 - 39110915
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||| ||| |||||||||||| | |  |||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  39110997 ccttacaaaaccggcttgtaaggcgaggattgtctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 39110915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29113543 - 29113458
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggac 86  Q
    |||||||||||||| | | |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||    
T  29113543 tcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggac 29113458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35269105 - 35269028
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccga 78  Q
    |||||||||||||| | | |||||||| ||| ||| | ||||||||||||||||||| |||||||  ||| |||||||    
T  35269105 tcatccttacaaaatcagcttgtaaggtgaggagtgcttcctctttataaactcttctcaagaatcttatctatccga 35269028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 52810672 - 52810725
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaat 91  Q
    |||||||||||||||||||| |||||||  ||| |||||||||| |||||||||    
T  52810672 ctcctctttataaactcttctcaagaatcttatctatccgatgtaggactaaat 52810725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 2016619 - 2016535
Alignment:
Q  8 tacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||| ||| || || || ||| ||| ||||||||||||||||||||| |||||||  ||| |||| |||||| |||||||||    
T  2016619 tacaaaatcggcttatacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatctgatgtgagactaaatc 2016535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 4026124 - 4026076
Alignment:
Q  44 tttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  4026124 tttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 4026076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 28085785 - 28085733
Alignment:
Q  4 tccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactctt 56  Q
    ||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||    
T  28085785 tccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 28085733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34206003 - 34206095
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataa-actcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | |||||||| ||| ||| |||||||||||||| ||||||  ||||| |  ||| || ||||||||||||||||||    
T  34206003 tcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccgatgtgggactaaatc 34206095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37097741 - 37097832
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | |||||  | ||| |||  |||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||    
T  37097741 tcatccttacaaaacccgcttgtacagtgaggagtgtctcctctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatc 37097832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 53738218 - 53738309
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||  || |||||||| ||  |||  |||||||||||||||||||| ||||| |  ||| ||| | |||||||||||||||    
T  53738218 tcatccttacaaaactggcttgtaaggtgacgagtgtctcctctttataaactcttctcaagagtcttatctattctatgtgggactaaatc 53738309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28497224 - 28497310
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| ||  ||| |||  ||| ||||||||||||||||||||  ||||| |  ||| ||||||||||||||||    
T  28497224 tcatccttacaaaaccggtttacaagccgaagagtgcctcctctttataaactcttatcaagagtcttatctatccgatgtgggact 28497310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41176800 - 41176746
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| ||| | |||||||||||||||||    
T  41176800 tcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 41176746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 41743168 - 41743246
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||| ||| |||||||||||| |||  |||||||||||| ||||||| ||| | || ||| ||||||||||| ||||    
T  41743168 acaaaatcggtttgtaaggcgaggagtgtctcctctttatatactcttctcaaaagttgtatctatccgatgtgagact 41743246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 49380898 - 49380976
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||| ||||    
T  49380898 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagact 49380976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 49544389 - 49544335
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| |||||||  ||| |||||||||||| || |||||    
T  49544389 ctcctctttataaactcttctcaagaatcttatctatccgatgtggaacaaaatc 49544335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 54210471 - 54210385
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| ||||||   ||| | ||||||||||||||| ||||||| ||||| |  | | ||||||||||||||||    
T  54210471 tcatccttacaaaaccggcttgtaatttgagaattacctcctctttatatactcttctcaagagtcttgtctatccgatgtgggact 54210385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 5715975 - 5716104
Alignment:
Q  127 tatttgcaaattaacccttt-tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttatt 225  Q
    |||||||||||| ||||||  |||||||||| ||| ||| ||| ||||| | ||| ||||||| ||   || ||||||||| | ||||||||  ||||||    
T  5715975 tatttgcaaattgacccttaatttcaatttttaaatttggcccaaaaaaattaaatttgataatagtttccaaaaaataatgagaatgaaattttttatt 5716074  T
Q  226 actctaaccaaccaacaatatttagaaatg 255  Q
    |||  | |||| ||| ||||||||||||||    
T  5716075 acttgatccaaacaaaaatatttagaaatg 5716104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 48843037 - 48843118
Alignment:
Q  11 aaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| |||| |||| |||||||||||    
T  48843037 aaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtcctatctatctgatgcgggactaaatc 48843118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 991112 - 991041
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| ||||||| || ||||||||||    
T  991112 ttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgacgt-ggactaaatc 991041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27048147 - 27048199
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaact 53  Q
    |||||||||||||| ||| ||| |||| ||| ||| |||||||||||||||||    
T  27048147 tcatccttacaaaaccggcttgcaaggtgaggagtgcctcctctttataaact 27048199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34206265 - 34206357
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataa-actcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||| ||| ||| |||||||| ||| ||| |||||||||||||| ||||||  ||||| |  ||| || |||||||| |||||||||    
T  34206265 tcatccttacgaaaccggcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccgatgtgagactaaatc 34206357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 84044 - 84135
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  84044 tcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatatatccgatgtgggactaaatc 84135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37995644 - 37995735
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  37995644 tcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 37995735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24994163 - 24994075
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||| |||| ||  ||||||||   ||||||||||||||    
T  24994163 tcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactcttctcaagcatcctatttatc---tgtgggactaaatc 24994075  T

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Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 1028111 - 1028194
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  1028111 acaaaaccggtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatc 1028194  T

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Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13843791 - 13843700
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||  ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  13843791 tcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 13843700  T

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Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13844107 - 13844016
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||  |||||||| ||| ||| ||||||||||||||||||||| ||||| |  ||| |||| ||||||||||||||||    
T  13844107 tcatccttacaaaaccgttttgtaaggtgagaagtgcctcctctttataaactcttctcaagagtactatctatcagatgtgggactaaatc 13844016  T

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Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22196336 - 22196427
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| || || || ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  22196336 tcatccttacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatc 22196427  T

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Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22196563 - 22196654
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| || ||  |||  |||||||||||||||||||| ||||| | |||| |||||||||||||||||||||    
T  22196563 tcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggactaaatc 22196654  T

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Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38131858 - 38131767
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| | |  |||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  38131858 tcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatc 38131767  T

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Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 35526998 - 35527084
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  35526998 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 35527084  T

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Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24918255 - 24918194
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaag 62  Q
    |||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||| ||||    
T  24918255 tcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactcttctcaag 24918194  T

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Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 30329928 - 30329839
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||| ||||||| ||  ||||| || ||| ||| ||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  30329928 atccatacaaaaccgacttgtacggtgaggagttcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 30329839  T

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Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 28009826 - 28009898
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||| |||| |||| |||||||||||||||| ||||| || ||| |||| ||||||||||||||||    
T  28009826 ttgtaaggcgattagtgcctcttctttataaactcttctcaagagttctatctatctgatgtgggactaaatc 28009898  T

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Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 28489779 - 28489930
Alignment:
Q  106 ttggcccctcaaaatttttggtatttgcaaattaaccctt-ttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaata 204  Q
    ||||||||||||||||||||  |||| |||||||||||||  |||||||||||||| ||| ||| ||||||| |||||| ||||||   ||| ||||||     
T  28489779 ttggcccctcaaaatttttgaaatttacaaattaacccttaatttcaattttcaaatttggcccaaaaaatt-aaaatttataaaaattgcctaaaaatg 28489877  T
Q  205 ataacaatgaaatgatttattactctaaccaaccaacaatatttagaaatgaa 257  Q
    ||  | |||||||  |||||| ||| | |||| ||| |||||| |||||||||    
T  28489878 atggcgatgaaattttttatttctccatccaaacaaaaatattgagaaatgaa 28489930  T

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Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 83821 - 83911
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||| ||| |||||||  ||| |||||||||||||||||||||    
T  83821 tcatccatacaaaaccggcttgtacggtgag-agtgcctcctctttataaacttttctcaagaatcctatatatccgatgtgggactaaatc 83911  T

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Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 873706 - 873797
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| | | |||||||| ||| | | |||||||| |||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  873706 tcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaactcttctcaagagtcctatctatccgatgtgggactaaatc 873797  T

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Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2471703 - 2471794
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||||||| ||| ||   ||| |||||||||||||||||||||    
T  2471703 tcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaaaaaccctatctatccgatgtgggactaaatc 2471794  T

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Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 17492879 - 17492769
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatat 246  Q
    |||||||||||||| ||| ||  ||||||| |||||| || ||||  | |||||||| |||||||||||||  |||||||||| | |||| ||| |||||    
T  17492879 tttcaattttcaaatttggcctaaaaaatt-aaaatttattaaagttgtccaaaaatgataacaatgaaattttttattactccagccaaacaaaaatat 17492781  T
Q  247 ttagaaatgaag 258  Q
    ||||||||||||    
T  17492780 ttagaaatgaag 17492769  T

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Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 27760165 - 27760078
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||| ||| |||||||| ||| ||| |||| |||||| ||||||||| ||||| |  ||| |||||||||||||||||||||    
T  27760165 ccttacaaaaccggcttgtaaggtgaggagtgcctcttctttagaaactcttctcaagagtcctatctatccgatgtgggactaaatc 27760078  T

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Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29432506 - 29432415
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||  ||||| |  ||| || || |||||||||||||||    
T  29432506 tcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtgggactaaatc 29432415  T

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Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32395324 - 32395415
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| |||||  | ||| ||| ||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  32395324 tcatccatacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatc 32395415  T

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Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33040157 - 33040066
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||| |||||||||||  |||||||  ||| ||| ||||||| |||||||||    
T  33040157 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttttcaagaatcctatatattcgatgtgagactaaatc 33040066  T

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Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 39668463 - 39668518
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||    
T  39668463 cctcctctttataaattcttctcaagaatcatatctatccgatgtgggactaaatc 39668518  T

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Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48114 - 48200
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  48114 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 48200  T

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Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24125156 - 24125070
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | ||||||||||||||| ||||||| ||||| |  | |||||||||||| |||||    
T  24125156 tcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtttatccgatgtaggact 24125070  T

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Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38376825 - 38376739
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | |  |||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  38376825 tcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 38376739  T

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Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3763000 - 3762915
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggac 86  Q
    |||||||||||||| ||| |||||||| ||  | | ||||||||||||||||||||| ||||| |  ||| |||||||||||||||    
T  3763000 tcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggac 3762915  T

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Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 30330153 - 30330064
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||| ||| ||||| || ||| ||| ||||||||||||| ||||||| ||||||| |||| ||| | |||||||||||||||    
T  30330153 atccttgcaaaaccggcttgtacggtgaggagtgcctcctctttatatactcttctcaagaatcatatctattcaatgtgggactaaatc 30330064  T

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Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14769842 - 14769933
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||||| ||| ||||| || ||| |||  ||| |||||||||||||||| |||||||  ||| ||||||||||| |||||||||    
T  14769842 tcatcctttcaaaaccggcttgtacggtgaggagtgtctcgtctttataaactcttctcaagaatcctatctatccgatgtgagactaaatc 14769933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20811548 - 20811457
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| |||||||| ||| |||||||| | | ||| ||||||||||||||| ||||| ||||| |  ||| ||||||| |||||||||||||    
T  20811548 tcatcattacaaaaccggcttgtaaggtgtggagtgcctcctctttataaaatcttctcaagagtgttatctatccgaagtgggactaaatc 20811457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20837903 - 20837812
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||| |||||||| ||| |||||||| | | ||| ||||||||||||||| ||||| ||||| |  ||| ||||||| |||||||||||||    
T  20837903 tcatcattacaaaaccggcttgtaaggtgtggagtgcctcctctttataaaatcttctcaagagtgttatctatccgaagtgggactaaatc 20837812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29396353 - 29396444
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||||||| ||| ||||| || ||| ||| ||||||||||||||||| ||| ||||| |  ||| |||| ||||||||||||||||    
T  29396353 tcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaacttttctcaagattcctatctatctgatgtgggactaaatc 29396444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2716640 - 2716554
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| || ||||| ||| ||| ||||||| ||||||||||||  ||||| | |||||||||| || |||||||    
T  2716640 tcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaactcttatcaagagtcatatttatccaatctgggact 2716554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2908572 - 2908658
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||| ||| ||||| |  | | ||||||||||||||||    
T  2908572 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatccgatgtgggact 2908658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13413678 - 13413592
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| |||  |||||||||||    
T  13413678 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatttgatgtgggact 13413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 21541222 - 21541144
Alignment:
Q  195 cccaaaaataataacaatgaaatgatttattactctaaccaaccaacaatatttagaaatgaagtgaattcaattgaat 273  Q
    |||||||||||| |||||||||| ||||||||||| | |||| ||| |||||||| |||| | |  |||||||||||||    
T  21541222 cccaaaaataatgacaatgaaattatttattactcaatccaaacaaaaatatttaaaaataatgacaattcaattgaat 21541144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28358045 - 28358131
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | |  |||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  28358045 tcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 28358131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34457397 - 34457311
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | | ||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  34457397 tcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 34457311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37656742 - 37656828
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||| ||||    
T  37656742 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagact 37656828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40169051 - 40169137
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| |||| |||||||||||    
T  40169051 tcatccttacaaaaccggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggact 40169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 33040562 - 33040473
Alignment:
Q  3 atccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||| ||| |||||||| ||| ||| |||||  |  ||||||||||| |||||||  ||| |||| ||||||||||||||||    
T  33040562 atccttacaaaaccggcttgtaaggtgaggagtgcctcccatacataaactcttctcaagaatcctatctatctgatgtgggactaaatc 33040473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 19439947 - 19439863
Alignment:
Q  8 tacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||| ||| ||||| || ||| |||  |||||||||||||| ||||| |||||||  ||| |||| ||||||||||||||||    
T  19439947 tacaaaaccggcttgtacggtgaggagtgtctcctctttataaattcttctcaagaatcctatctatctgatgtgggactaaatc 19439863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 28010145 - 28010217
Alignment:
Q  20 ttgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||| ||| ||| |||||||||||| | |||||| ||||| || ||| ||||| |||||||||||||||    
T  28010145 ttgtaaggtgaggagtgcctcctctttattagctcttctcaagagttctatctatcctatgtgggactaaatc 28010217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18541816 - 18541725
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||| ||| ||||| |  ||| ||| ||||||||||||||||| ||| |||||||  ||| |||||||| |  |||||||||    
T  18541816 tcatccttacaaaatcggcttgtaggttgaggagtgcctcctctttataaactattctcaagaatcttatctatccgatcttagactaaatc 18541725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 24792285 - 24792367
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||| |||||||| ||| ||| ||||||||| ||||||||||| ||||| |  ||| |||||||| ||||||||||||    
T  24792285 acaaaaccggtttgtaaggtgaggagtgcctcctctt-ataaactcttctcaagattcctatctatccgatatgggactaaatc 24792367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 30588115 - 30588060
Alignment:
Q  37 cctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||||||||||||||||  ||||| || ||| || ||||||||||||||||||    
T  30588115 cctcctctttataaactcttatcaagagttctatctaaccgatgtgggactaaatc 30588060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38663341 - 38663286
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactctt 56  Q
    |||||||||||||| ||| |||||||| ||  ||| ||||||||||||||||||||    
T  38663341 tcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactctt 38663286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48321 - 48383
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||| ||| |||||    
T  48321 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaacttttctcaaga 48383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11632525 - 11632439
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| || ||||| ||| | | |||| |||||||||||||||| ||||| |  | | ||||||||||||||||    
T  11632525 tcatccttacaaaaccggcttataaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccgatgtgggact 11632439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12965256 - 12965310
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| ||| | |||||||||||||||||    
T  12965256 tcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 12965310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 20720560 - 20720646
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| |||||| | ||| ||| |||||| |||| ||||||||  |||||||  ||| |||| |||||||||||    
T  20720560 tcatccttacaaaaccggcttgtaaagtgaggagtgcctcctttttacaaactcttatcaagaatcttatctatctgatgtgggact 20720646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28156124 - 28156070
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactct 55  Q
    |||||||||||||| ||| |||||||| ||| | | |||||||||||||||||||    
T  28156124 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct 28156070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34457190 - 34457128
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | | | ||||||||||||||||||| |||||    
T  34457190 tcatccttacaaaaccggcttgtaaggtgaggattgcatcctctttataaactcttctcaaga 34457128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37781854 - 37781940
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| | | |||||||| ||| | | ||||||||||||| ||||||| ||||| |  ||| ||||||||||| ||||    
T  37781854 tcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagact 37781940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43490473 - 43490559
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| ||| ||| |||| ||||| |  || ||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  43490473 tcatccttacaaaaccggcttggaaggtgagtattgtcttctctttataaactcttctcaagagtcttgtctatccgatgtgggact 43490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 927659 - 927740
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattact 228  Q
    |||||||||||||| ||||||| ||||| | |||||| |||||||  | |||||||| || |||||||| |  |||||||||    
T  927659 tttcaattttcaaatttgacccaaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattact 927740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 17135576 - 17135527
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||||||||  ||||| |  ||||||||||||||||||||    
T  17135576 ctcctctttataaactcttatcaagagtcttatttatccgatgtgggact 17135527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 43490303 - 43490352
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  43490303 ctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 43490352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2908779 - 2908831
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaact 53  Q
    |||||||||||||| ||| |||||||| ||| | | |||||||||||||||||    
T  2908779 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 2908831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 8255301 - 8255429
Alignment:
Q  129 tttgcaaattaacccttt-tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaaatgatttattac 227  Q
    |||||||||| ||||||  ||| |||||||||| ||| | | |||||   ||||||||||||||  ||  |||||| || ||||||||||  | ||||||    
T  8255301 tttgcaaattgacccttaattttaattttcaaatttgccgcaaaaaaaataaaattgataaaagttgctaaaaaatgatgacaatgaaattttgtattac 8255400  T
Q  228 tctaaccaaccaacaatatttagaaatga 256  Q
    || | |||| ||| |||||||||||||||    
T  8255401 tccatccaaacaagaatatttagaaatga 8255429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 28490238 - 28490306
Alignment:
Q  92 caaaatattgcaaattggcccctcaaaatttttggtatttgcaaattaaccctt-ttttcaattttcaa 159  Q
    ||||| |||| |||||| ||||||||||||||||  |||| |||||| ||||||  |||||||||||||    
T  28490238 caaaaaattgtaaattgacccctcaaaatttttgaaatttacaaattgacccttaatttcaattttcaa 28490306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 30870933 - 30870977
Alignment:
Q  39 tcctctttataaactcttcccaagaattatatttatccgatgtgg 83  Q
    ||||||||||||||||||| |||||||  ||| ||||||||||||    
T  30870933 tcctctttataaactcttctcaagaatcttatctatccgatgtgg 30870977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35527284 - 35527340
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttc 57  Q
    |||||||||||||| ||| |||||||| ||| | | |||||||||| ||||||||||    
T  35527284 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttc 35527340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 41761936 - 41761868
Alignment:
Q  147 tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataacaatgaa 215  Q
    |||||||||||||| ||| ||| ||||| | |||||| |||||||  |||||||||| || ||||||||    
T  41761936 tttcaattttcaaatttggcccaaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaa 41761868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 110 - 257
Target Start/End: Complemental strand, 19536 - 19388
Alignment:
Q  110 cccctcaaaatttttggtatttgcaaattaacccttt-tttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcccaaaaataataa 208  Q
    |||||||||||||||  || || |||||| |||| |  |||||||||||||| ||| ||| ||||| | |||||| |||||||| |||||||||| || |    
T  19536 cccctcaaaattttttataattacaaattgacccctaatttcaattttcaaatttggcccaaaaaaattaaaatttataaaagctgcccaaaaatgatga 19437  T
Q  209 caatgaaatgatttattactctaaccaaccaacaatatttagaaatgaa 257  Q
    |||||||||  |||||||||| | |||| ||| | |||| |||||||||    
T  19436 caatgaaattttttattactccatccaaacaaaagtattgagaaatgaa 19388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 165871 - 165787
Alignment:
Q  8 tacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    ||||||| ||| ||||| || ||  ||| ||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||    
T  165871 tacaaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagaattctatctatccgatgtaggactaaatc 165787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 3167 - 3221
Alignment:
Q  38 ctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||    
T  3167 ctcctctttataaactcttctcaaaaattctatctatccgatgtgggactaaatc 3221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 4331 - 4487
Alignment:
Q  98 attgcaaattggcccctcaaaatttttggtatttgcaaatt-aacccttttttcaattttcaaagttgacccgaaaaattcaaaattgataaaagcagcc 196  Q
    ||||||||||| ||||||||||||||||  |||| |||||| | ||||  ||| |||||||||| ||||||| |||||||  ||||  |||||||  |||    
T  4331 attgcaaattgacccctcaaaatttttgaaatttacaaattgacccctaattttaattttcaaatttgacccaaaaaatt--aaat--ataaaagttgcc 4426  T
Q  197 caaaaataataacaatgaaatgatttattactctaaccaaccaacaatatttagaaatgaa 257  Q
    ||||||| || ||||||||||  || ||||||| | |||| ||| | |||| |||||||||    
T  4427 caaaaatgatgacaatgaaatttttgattactccatccaaacaaaagtattgagaaatgaa 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 76946 - 76860
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    ||||| |||||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  ||| ||||||||||||||||    
T  76946 tcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 76860  T

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Target: scaffold0419 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4249 - 4311
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaaga 63  Q
    |||||||||||||| ||| |||||||| ||| | ||||||||||||||| ||||||| |||||    
T  4249 tcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaaga 4311  T

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Target: scaffold0434 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13400 - 13315
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggac 86  Q
    ||||||| |||||| ||| |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | |||||||||||||||    
T  13400 tcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggac 13315  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 43810 - 43726
Alignment:
Q  5 ccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaa 89  Q
    |||||||||| ||||||||| || ||| |||   ||||||||||||||||||| |||||||  ||| |||| ||||||| |||||    
T  43810 ccttacaaaatcggattgtacggtgaggagtgtttcctctttataaactcttctcaagaatcctatctatctgatgtggtactaa 43726  T

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Target: scaffold0166 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 34668 - 34750
Alignment:
Q  9 acaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggactaaatc 92  Q
    |||||| ||| |||||||| ||| ||| ||||||||| ||||||||||| ||||| |  ||| |||||||| ||||||||||||    
T  34668 acaaaaccggtttgtaaggtgaggagtgcctcctctt-ataaactcttctcaagattcctatctatccgatatgggactaaatc 34750  T

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Target: scaffold0989 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2957 - 3043
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| | | |||||| | ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  2957 tcatccttacaaaaccagcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 3043  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21273 - 21359
Alignment:
Q  1 tcatccttacaaaagcggattgtaaggcgagtagtacctcctctttataaactcttcccaagaattatatttatccgatgtgggact 87  Q
    |||||||||||||| |   |||||||| ||| | | ||||||||||||||||||||| ||||| |  | | ||||||||||||||||    
T  21273 tcatccttacaaaaccaacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 21359  T

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