View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: P12_low_1 (Length: 689)

Name: P12_low_1
Description: P12
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] P12_low_1
P12_low_1
[»] chr1 (35 HSPs)
chr1 (10-332)||(3877485-3877803)
chr1 (392-672)||(3877215-3877487)
chr1 (447-652)||(43241162-43241368)
chr1 (468-659)||(35829195-35829387)
chr1 (447-652)||(49348175-49348381)
chr1 (447-652)||(51441545-51441751)
chr1 (220-385)||(32066805-32066967)
chr1 (196-394)||(32083255-32083453)
chr1 (452-538)||(32083531-32083617)
chr1 (468-660)||(34827888-34828080)
chr1 (196-385)||(35828903-35829092)
chr1 (440-580)||(37463636-37463777)
chr1 (447-543)||(51601463-51601559)
chr1 (235-390)||(28528159-28528314)
chr1 (447-652)||(8671216-8671421)
chr1 (271-385)||(40419264-40419378)
chr1 (196-321)||(51441274-51441399)
chr1 (462-517)||(13027297-13027352)
chr1 (486-580)||(40419049-40419143)
chr1 (437-559)||(46227075-46227198)
chr1 (196-321)||(7921574-7921699)
chr1 (196-312)||(19936177-19936294)
chr1 (196-280)||(51234302-51234386)
chr1 (234-293)||(12807635-12807694)
chr1 (196-322)||(1210391-1210517)
chr1 (447-533)||(7813911-7813996)
chr1 (196-321)||(27445545-27445670)
chr1 (343-395)||(7814067-7814119)
chr1 (514-609)||(16142675-16142771)
chr1 (271-376)||(16273417-16273519)
chr1 (196-394)||(8671494-8671692)
chr1 (196-322)||(43240891-43241017)
chr1 (196-322)||(51601704-51601830)
chr1 (284-390)||(52421008-52421114)
chr1 (440-520)||(38205425-38205505)
[»] chr8 (23 HSPs)
chr8 (462-619)||(15216068-15216226)
chr8 (447-652)||(36566022-36566228)
chr8 (447-619)||(42854794-42854967)
chr8 (462-652)||(36544447-36544638)
chr8 (447-580)||(12492623-12492757)
chr8 (239-385)||(38667142-38667286)
chr8 (437-580)||(41445074-41445219)
chr8 (232-395)||(41444849-41445013)
chr8 (196-385)||(36544735-36544924)
chr8 (196-312)||(4033004-4033120)
chr8 (235-382)||(25985128-25985273)
chr8 (220-385)||(33830767-33830929)
chr8 (196-311)||(42854514-42854629)
chr8 (440-529)||(30579002-30579092)
chr8 (196-322)||(36565751-36565877)
chr8 (503-579)||(3284861-3284938)
chr8 (212-266)||(18124878-18124932)
chr8 (271-325)||(18849700-18849754)
chr8 (265-385)||(28300687-28300803)
chr8 (453-521)||(11130727-11130796)
chr8 (233-322)||(12492389-12492478)
chr8 (340-396)||(13984202-13984258)
chr8 (461-529)||(38666986-38667054)
[»] chr3 (29 HSPs)
chr3 (447-652)||(51448490-51448696)
chr3 (462-652)||(52138123-52138314)
chr3 (437-561)||(29816891-29817016)
chr3 (196-387)||(48221365-48221556)
chr3 (196-387)||(25190960-25191151)
chr3 (464-540)||(9258294-9258370)
chr3 (470-658)||(48221070-48221259)
chr3 (447-652)||(38849389-38849595)
chr3 (235-396)||(44395002-44395163)
chr3 (260-391)||(19757645-19757776)
chr3 (273-385)||(43111606-43111715)
chr3 (437-543)||(50630092-50630198)
chr3 (220-321)||(27917219-27917320)
chr3 (297-385)||(1448224-1448312)
chr3 (236-376)||(32490274-32490414)
chr3 (437-500)||(19736614-19736677)
chr3 (437-500)||(19757432-19757495)
chr3 (462-528)||(26592236-26592302)
chr3 (196-322)||(38849740-38849866)
chr3 (196-322)||(47542221-47542347)
chr3 (196-394)||(51448219-51448417)
chr3 (297-394)||(30724411-30724508)
chr3 (297-385)||(1470708-1470796)
chr3 (233-396)||(15750810-15750973)
chr3 (342-393)||(19757559-19757610)
chr3 (219-310)||(26489975-26490066)
chr3 (437-522)||(805377-805462)
chr3 (447-500)||(25190827-25190880)
chr3 (272-397)||(26592022-26592147)
[»] chr7 (34 HSPs)
chr7 (447-652)||(11593248-11593454)
chr7 (452-652)||(46356637-46356838)
chr7 (447-652)||(49028576-49028782)
chr7 (447-609)||(32629946-32630109)
chr7 (447-580)||(33350587-33350721)
chr7 (447-652)||(36651289-36651495)
chr7 (447-580)||(39907160-39907294)
chr7 (437-570)||(43793803-43793938)
chr7 (447-541)||(36870070-36870164)
chr7 (469-609)||(38896949-38897090)
chr7 (196-394)||(38606580-38606777)
chr7 (461-608)||(24426284-24426432)
chr7 (461-570)||(38606415-38606525)
chr7 (472-570)||(20499486-20499585)
chr7 (242-394)||(32630181-32630333)
chr7 (454-543)||(24177983-24178072)
chr7 (472-580)||(48055623-48055732)
chr7 (212-312)||(24177721-24177821)
chr7 (303-383)||(24436514-24436594)
chr7 (462-521)||(21520229-21520288)
chr7 (238-385)||(43793592-43793739)
chr7 (196-394)||(37616490-37616688)
chr7 (196-322)||(46356361-46356487)
chr7 (196-322)||(11593606-11593732)
chr7 (447-521)||(23087896-23087970)
chr7 (196-394)||(33350316-33350514)
chr7 (196-322)||(36651640-36651766)
chr7 (271-312)||(18608275-18608316)
chr7 (271-312)||(18626562-18626603)
chr7 (271-312)||(18637236-18637277)
chr7 (271-312)||(18650671-18650712)
chr7 (447-500)||(31004672-31004725)
chr7 (233-322)||(49028913-49029002)
chr7 (439-521)||(17101259-17101338)
[»] chr4 (44 HSPs)
chr4 (461-652)||(23907097-23907289)
chr4 (447-672)||(39707738-39707963)
chr4 (461-652)||(435527-435719)
chr4 (447-579)||(1212088-1212221)
chr4 (242-395)||(10775975-10776128)
chr4 (447-617)||(1777796-1777967)
chr4 (507-652)||(53703905-53704051)
chr4 (437-533)||(17666796-17666892)
chr4 (442-529)||(42037327-42037414)
chr4 (196-322)||(27450683-27450809)
chr4 (447-580)||(48623308-48623442)
chr4 (271-382)||(33369356-33369464)
chr4 (196-385)||(41427422-41427610)
chr4 (461-580)||(27450968-27451088)
chr4 (196-394)||(31960324-31960522)
chr4 (211-396)||(20917554-20917739)
chr4 (233-390)||(39708035-39708192)
chr4 (230-371)||(47265748-47265889)
chr4 (196-322)||(435875-436001)
chr4 (196-294)||(3273096-3273194)
chr4 (437-582)||(10776190-10776336)
chr4 (298-396)||(25867163-25867261)
chr4 (196-322)||(33226855-33226981)
chr4 (196-322)||(48623037-48623163)
chr4 (196-309)||(1629090-1629203)
chr4 (461-561)||(3272815-3272916)
chr4 (461-512)||(16002350-16002401)
chr4 (235-326)||(39754920-39755011)
chr4 (195-322)||(56374936-56375063)
chr4 (196-322)||(1777525-1777651)
chr4 (447-533)||(17668104-17668190)
chr4 (196-322)||(23906811-23906937)
chr4 (437-519)||(35556092-35556173)
chr4 (487-533)||(55769198-55769244)
chr4 (437-542)||(15183461-15183566)
chr4 (220-385)||(17666572-17666732)
chr4 (461-533)||(21060188-21060260)
chr4 (483-541)||(20917413-20917471)
chr4 (447-501)||(53707241-53707295)
chr4 (487-533)||(55833454-55833500)
chr4 (447-501)||(56374737-56374791)
chr4 (261-325)||(25597933-25597997)
chr4 (343-395)||(55769034-55769086)
chr4 (343-395)||(55833290-55833342)
[»] chr2 (33 HSPs)
chr2 (447-645)||(24584387-24584586)
chr2 (447-672)||(2609803-2610029)
chr2 (462-609)||(452412-452560)
chr2 (447-609)||(38453399-38453562)
chr2 (447-652)||(45368406-45368612)
chr2 (447-643)||(8180099-8180296)
chr2 (196-394)||(11992616-11992814)
chr2 (196-322)||(45368134-45368259)
chr2 (468-580)||(876521-876634)
chr2 (486-579)||(16292081-16292175)
chr2 (196-394)||(24584116-24584314)
chr2 (196-322)||(38453130-38453256)
chr2 (448-529)||(13148741-13148822)
chr2 (197-394)||(41763560-41763757)
chr2 (221-385)||(7789074-7789238)
chr2 (199-395)||(37281680-37281878)
chr2 (196-394)||(2610102-2610300)
chr2 (447-541)||(12475202-12475296)
chr2 (462-569)||(14769676-14769785)
chr2 (272-352)||(12904584-12904664)
chr2 (196-322)||(4807238-4807364)
chr2 (440-528)||(7135445-7135533)
chr2 (327-383)||(14769884-14769940)
chr2 (482-533)||(13593172-13593223)
chr2 (196-385)||(8180363-8180552)
chr2 (196-312)||(452132-452248)
chr2 (272-356)||(23866267-23866351)
chr2 (489-524)||(33595091-33595126)
chr2 (196-322)||(13148959-13149085)
chr2 (459-517)||(34502106-34502164)
chr2 (437-499)||(36038669-36038731)
chr2 (462-526)||(7789347-7789411)
chr2 (297-385)||(13592959-13593047)
[»] chr6 (21 HSPs)
chr6 (447-652)||(6082695-6082901)
chr6 (462-619)||(9706103-9706261)
chr6 (447-609)||(30670226-30670389)
chr6 (470-586)||(2208206-2208323)
chr6 (447-577)||(5258931-5259063)
chr6 (487-609)||(3629568-3629691)
chr6 (196-395)||(5258660-5258859)
chr6 (200-394)||(10100371-10100565)
chr6 (461-541)||(5631224-5631304)
chr6 (447-579)||(20428418-20428551)
chr6 (437-539)||(9369171-9369274)
chr6 (469-541)||(2680853-2680926)
chr6 (193-381)||(7079728-7079909)
chr6 (196-312)||(9706432-9706548)
chr6 (196-381)||(20428146-20428331)
chr6 (196-394)||(5631391-5631590)
chr6 (447-526)||(33495629-33495708)
chr6 (463-582)||(27790521-27790641)
chr6 (260-371)||(3632613-3632724)
chr6 (342-384)||(2680706-2680748)
chr6 (193-293)||(8811840-8811940)
[»] chr5 (36 HSPs)
chr5 (447-643)||(2076255-2076452)
chr5 (452-652)||(1288375-1288576)
chr5 (447-652)||(1274560-1274766)
chr5 (447-652)||(24177819-24178025)
chr5 (447-580)||(3394078-3394212)
chr5 (447-643)||(20318295-20318492)
chr5 (196-394)||(3394285-3394482)
chr5 (461-582)||(27296-27417)
chr5 (452-579)||(12493148-12493276)
chr5 (450-543)||(3301254-3301347)
chr5 (447-543)||(10638703-10638799)
chr5 (196-394)||(3301423-3301621)
chr5 (212-530)||(43558340-43558670)
chr5 (196-394)||(20318565-20318763)
chr5 (260-377)||(25937662-25937780)
chr5 (447-533)||(28977638-28977724)
chr5 (239-384)||(6368478-6368623)
chr5 (196-322)||(12492897-12493023)
chr5 (463-609)||(40383794-40383941)
chr5 (463-517)||(14099757-14099811)
chr5 (487-580)||(31502868-31502962)
chr5 (328-382)||(35685437-35685491)
chr5 (461-570)||(37123946-37124056)
chr5 (196-385)||(1274848-1275037)
chr5 (235-312)||(27302496-27302573)
chr5 (234-369)||(16347950-16348085)
chr5 (462-533)||(35685270-35685340)
chr5 (196-322)||(2075984-2076110)
chr5 (196-322)||(10638943-10639069)
chr5 (468-517)||(3096625-3096674)
chr5 (240-329)||(21363013-21363102)
chr5 (437-533)||(7672588-7672684)
chr5 (471-511)||(16134841-16134881)
chr5 (232-312)||(17341747-17341827)
chr5 (297-385)||(23979815-23979903)
chr5 (196-312)||(24178180-24178296)
[»] scaffold0018 (1 HSPs)
scaffold0018 (447-652)||(30763-30969)
[»] scaffold0286 (1 HSPs)
scaffold0286 (470-586)||(305-422)
[»] scaffold0606 (2 HSPs)
scaffold0606 (235-356)||(9269-9390)
scaffold0606 (485-587)||(9028-9131)
[»] scaffold0024 (1 HSPs)
scaffold0024 (200-312)||(82377-82489)
[»] scaffold0045 (1 HSPs)
scaffold0045 (492-586)||(88760-88855)
[»] scaffold0570 (1 HSPs)
scaffold0570 (196-322)||(2780-2906)
[»] scaffold0113 (2 HSPs)
scaffold0113 (447-516)||(12373-12442)
scaffold0113 (233-312)||(12145-12224)
[»] scaffold0220 (2 HSPs)
scaffold0220 (473-533)||(25020-25080)
scaffold0220 (328-383)||(24863-24918)
[»] scaffold0896 (1 HSPs)
scaffold0896 (193-293)||(4286-4386)


Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 10 - 332
Target Start/End: Complemental strand, 3877803 - 3877485
Alignment:
Q  10 attatactccctcttctcatgttcttcttttaactttaaatgggtccggcaaatgattgatgagattgaaccccgatttgtccgttcatggactagttac 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| |||    
T  3877803 attatactccctcttctcatgttcttcttttaactttaaatgggtccggcaaatgatcgatgagattgaaccccgatatgtcggttcatggactagatac 3877704  T
Q  110 cgaatcaaacattttcgtattaaatggggtcggcttatgttaccatgtttaatcataaaccatatttccattaaactcattcattaatttcaaccaccca 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||    ||||||||||||| ||||||    
T  3877703 cgaatcaaacattttcgtattaaatggggtcggcttatgttaccatgtttaatcataaaccatatttcggttcaac----tcattaatttcaagcaccca 3877608  T
Q  210 tattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3877607 tattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatataatctc 3877508  T
Q  310 caatttttacctctaaaatagaa 332  Q
    |||||||||||||||||| ||||    
T  3877507 caatttttacctctaaaacagaa 3877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 392 - 672
Target Start/End: Complemental strand, 3877487 - 3877215
Alignment:
Q  392 gaagttgtgtgtttttaaggtttatctccaacctcctattcaatgctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttg 491  Q
    |||||||||||||||||| | ||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||       
T  3877487 gaagttgtgtgtttttaaagcttatctccaacctcct--tcaatgctccaagtagaactgcatcattttcaaaaaacatacatctcgatcctagctc--- 3877393  T
Q  492 gatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttaggttgatccttgatgcaatcatattgttacgggaaaatcgttggtgacct 591  Q
       ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3877392 ---gtgttctataagtacatccaaaactaaggtaaaaagatatggactaaggttgatccttgatgcaatcatattgttacgggaaaatcgttggtgacct 3877296  T
Q  592 catcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatataagtaatccatactcctttct 672  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  3877295 catcgtgcgtcctcacactagttgaagcctcctagtagatgtccttgatagctcaaatataagtaatccttactcctttct 3877215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 447 - 652
Target Start/End: Original strand, 43241162 - 43241368
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  43241162 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 43241261  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   | |||||||||||||||||| ||| |||||  |||  ||||| ||||||||||| |    
T  43241262 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcgtgcgtcctcacactagtcgaagctccctcatacatatccttgatagccc 43241361  T
Q  646 gaatata 652  Q
     ||||||    
T  43241362 taatata 43241368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 468 - 659
Target Start/End: Original strand, 35829195 - 35829387
Alignment:
Q  468 catacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactt-aggttgatccttgatgcaatcatatt 566  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| || ||| |||||| ||| || |||||||||| ||||||| ||||    
T  35829195 catacatatcggtgctagctcttggatgtgttctgtaagtacatccaaaactaagttagaaatatatgggcttaagtttgatccttggtgcaatcctatt 35829294  T
Q  567 gttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatataagtaatc 659  Q
    |||| ||||||||||| || |||| |||| || || ||||||| |||||||| | |||  | ||| |  ||||||||||||| ||||| ||||    
T  35829295 gttatgggaaaatcgtcggcgaccccatcttgtgtactcacactagttgaagtcccctcatgcatatatttgatagctcgaacataagcaatc 35829387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 652
Target Start/End: Original strand, 49348175 - 49348381
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| || |    
T  49348175 gactacatcatctacaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggct 49348274  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| |    
T  49348275 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcatgcgtcctcacactagtcgaagctccctcatacatatccttgatagccc 49348374  T
Q  646 gaatata 652  Q
     ||||||    
T  49348375 taatata 49348381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 652
Target Start/End: Original strand, 51441545 - 51441751
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| | ||||||||| ||||||| ||||    
T  51441545 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagaaaaaagataaggacttagggtt 51441644  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   | |||| ||||||||||||| | | |||||  |||  ||||| ||||||||||| |    
T  51441645 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcttgcgtcctcacactaatcgaagctccctcatacatatccttgatagccc 51441744  T
Q  646 gaatata 652  Q
     ||||||    
T  51441745 taatata 51441751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 220 - 385
Target Start/End: Original strand, 32066805 - 32066967
Alignment:
Q  220 gatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttac 319  Q
    ||||| ||| |||||||| ||||||||  || |||| || |||| |||||  ||||||||| ||||||| ||||   |||||||||||||||||||| ||    
T  32066805 gatgatttacatttgcttttatttctctgtcattttgtactatgaacccaaaatatttaaactgtgtaacttgt---atgatatgatctccaattttcac 32066901  T
Q  320 ctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    ||||||  ||||| || |||  ||||||||||||||| ||| ||||||||||||| ||||||||||    
T  32066902 ctctaaggtagaactacttcaccttttgctaaaattacattacatatactatgtcatgcttctact 32066967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 32083255 - 32083453
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| |||||| ||||||||||| || |||| || |||||||||| ||||||||||||||| || ||| |     
T  32083255 atttcaaccacccagcttgaatacgatgatttacatttgcctctatttctccgtcattttgtactatggacccaagatatttaaattgtgcaacttgggg 32083354  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||   | |||  |||||||| || ||| ||| ||||||||  |||||||||||||| ||||||||    
T  32083355 tatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaa 32083453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 32083531 - 32083617
Alignment:
Q  452 catcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggac 538  Q
    |||||||| |||||| ||||||||||| ||||| |||||||||||||||| | ||||||||||||||||| ||||||||||| ||||    
T  32083531 catcatttgcaaaaagcatacatctcggtgctaactcttggatgtgttctgtcagtacatccaaaactaaagtaaaaagataaggac 32083617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 660
Target Start/End: Original strand, 34827888 - 34828080
Alignment:
Q  468 catacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactt-aggttgatccttgatgcaatcatatt 566  Q
    |||| |||| ||||||| |||||||||||||| | |||| |||||||||||||| |||||||  || || ||| || |||||||||| ||||| | ||||    
T  34827888 cataaatcttgatgctaactcttggatgtgttatgtaagaacatccaaaactaaagtaaaaaagtaaggtcttaagattgatccttg-tgcaagcctatt 34827986  T
Q  567 gttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatataagtaatcc 660  Q
    ||||  |||||||| ||||| |||||||| || |||||||||| ||| || ||| |||  ||||| || | ||||| ||||||||||| |||||    
T  34827987 gttattggaaaatcattggtaacctcatcttgagtcctcacactagtggaggccccctcatacatatcttggatagatcgaatataagcaatcc 34828080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 385
Target Start/End: Original strand, 35828903 - 35829092
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||| || || ||||| ||||| ||| || ||||||||||||||| ||| ||| || |||||||||| ||| |||||   | |||| |||||     
T  35828903 atttcaaccacacagatcgaattcgatgatttacatatgcttctatttctccgtcgctttgtactatggacccaagatgtttaagcagcgtaacttgtgg 35829002  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
     ||||||||||||| |  ||| ||||| ||  ||||| || |  ||||||||||||||||| |||||||||||| |||||||||| ||||    
T  35829003 tatgatatgatctctagctttcacctccaaggtagaactactatgtcttttgctaaaattacatttcatatactttgtcttgcttgtact 35829092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 580
Target Start/End: Original strand, 37463636 - 37463777
Alignment:
Q  440 caagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggact 539  Q
    |||| |||||| | |||| | |||||| ||||||||||| ||||| |||||||||||||||  |||| |||||||||||||| |||||||| || || ||    
T  37463636 caagcaggactacgtcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtaagaacatccaaaactaaagtaaaaaggtaagggct 37463735  T
Q  540 ta-ggttgatccttgatgcaatcatattgttacgggaaaatc 580  Q
    || |||||| ||||| ||||||| ||||||||  ||||||||    
T  37463736 tagggttgacccttggtgcaatcctattgttataggaaaatc 37463777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 447 - 543
Target Start/End: Complemental strand, 51601559 - 51601463
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg 543  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| |||||||||||||||||||||    
T  51601559 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagatatggacttagg 51601463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 390
Target Start/End: Complemental strand, 28528314 - 28528159
Alignment:
Q  235 cttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaat 334  Q
    ||||||||||||||| ||||| ||  || |||||| |||||||||| ||||||| |||||  ||| |||||||||||| ||| |||||||   ||||||     
T  28528314 cttctatttctccattgttttgtaacatagacccaagatatttaaactgtgtaacttgtggtatgctatgatctccaactttcacctctaggctagaaac 28528215  T
Q  335 aattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggc 390  Q
      |||| || ||||||||| |||||  |||||||| ||||||||||||||| ||||    
T  28528214 gcttcgcctcttgctaaaactatatcccatatactttgtcttgcttctactcaggc 28528159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 8671421 - 8671216
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||| ||||||||| ||||||||||| ||||||| ||||    
T  8671421 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacat-caaaactaaagtaaaaagataaggacttagggtt 8671323  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||| | ||||||  |||||||| ||||||||| | | |   | |||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| |    
T  8671322 gaccctaggtgcaattctattgttatgggaaaatcttcgatagtcccatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagccc 8671223  T
Q  646 gaatata 652  Q
     ||||||    
T  8671222 taatata 8671216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 385
Target Start/End: Complemental strand, 40419378 - 40419264
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatacta 370  Q
    |||||||||| ||||||| |||||  |||||||||||||||| ||| |||| ||   |||||||  || | ||||||||||||||| ||| |||||||||    
T  40419378 gatatttaaactgtgtaacttgtggtatgatatgatctccaactttcacctttacgctagaaatgctttgccttttgctaaaattacattccatatacta 40419279  T
Q  371 tgtcttgcttctact 385  Q
    |||| ||||||||||    
T  40419278 tgtcgtgcttctact 40419264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 321
Target Start/End: Original strand, 51441274 - 51441399
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||| || |||| ||| |  |||||| |||||||||| ||||||| ||| |     
T  51441274 atttcaaccacccagcttgaatatgatggcttagatctgcttctatttctccgtcattttgtatgaaagacccaagatatttaaactgtgtaacttgggg 51441373  T
Q  296 aatgatatgatctccaatttttacct 321  Q
     |||||||||||||||| ||| ||||    
T  51441374 tatgatatgatctccaactttcacct 51441399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 13027297 - 13027352
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaa 517  Q
    ||||||||||||||||  ||||||||||||||||| |||| |||||||||||||||    
T  13027297 aaaaaacatacatctcagtgctagctcttggatgttttctgtaagtacatccaaaa 13027352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 486 - 580
Target Start/End: Complemental strand, 40419143 - 40419049
Alignment:
Q  486 ctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttag-gttgatccttgatgcaatcatattgttacgggaaaatc 580  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||| |  ||||| ||||| | ||| ||||||| |||||||| |||||||||    
T  40419143 ctcttggatgtgttccgtaagtacatccaaaactaaggtgaaaagataagtgcttagtgttgaacattggtgcaatc-tattgttatgggaaaatc 40419049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 559
Target Start/End: Original strand, 46227075 - 46227198
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatgg 536  Q
    |||||| |||| || |||||| | |||||  ||||||||| | ||||| |||||||| |||||   ||||||||||||||||||| |||||||| || ||    
T  46227075 ctccaaatagggctacatcatatgcaaaaggcatacatcttggtgctaactcttggacgtgtttcgtaagtacatccaaaactaaagtaaaaaggtaagg 46227174  T
Q  537 actta-ggttgatccttgatgcaa 559  Q
     |||| |||||||||||| |||||    
T  46227175 gcttagggttgatccttggtgcaa 46227198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 321
Target Start/End: Complemental strand, 7921699 - 7921574
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    |||||||| |||||  ||||||| ||||  ||| || | |||||||||||| |||||||| || |||||| ||| ||||| ||||| |||||| |||||     
T  7921699 atttcaacaacccaacttgaattcgatggtttacatctccttctatttctcaatcgttttgtactatggatccaagatatataaatcgtgtaacttgtgg 7921600  T
Q  296 aatgatatgatctccaatttttacct 321  Q
     | |||||||||||||| ||| ||||    
T  7921599 taagatatgatctccaactttcacct 7921574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 19936294 - 19936177
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatc-gttttatattatggacccatgatatttaaattgtgtaatttgtg 294  Q
    ||||||||||||||  ||||||  ||||| ||| || ||||||||||||||| ||  |||| ||||||||||||| ||||||||||   ||||| ||| |    
T  19936294 atttcaaccacccagcttgaatacgatgatttacatatgcttctatttctccttcatttttgtattatggacccaagatatttaaaccatgtaacttggg 19936195  T
Q  295 aaatgatatgatctccaa 312  Q
      ||||||||||||||||    
T  19936194 gtatgatatgatctccaa 19936177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 51234386 - 51234302
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaa 280  Q
    ||||||||||||||  ||||||||||||| ||| || |||||| ||||||||||| ||||  | ||||||| || ||||||||||    
T  51234386 atttcaaccacccaacttgaatttgatgatttacatctgcttcaatttctccatcattttgcactatggactcaagatatttaaa 51234302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 12807635 - 12807694
Alignment:
Q  234 gcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgt 293  Q
    |||||||||||| | |||||||||| |||||| ||| |||||||||||||||||| ||||    
T  12807635 gcttctatttcttcgtcgttttatactatggatccaagatatttaaattgtgtaacttgt 12807694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 1210517 - 1210391
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||| |||||||||||| |||| ||  |  |||||| |||||||||| ||||||| ||| |     
T  1210517 atttcaaccacccagcttgaatacgatggcttacatctgcttttatttctccatcattttgtacgaaagacccaagatatttaaactgtgtaacttgggg 1210418  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  1210417 tatgatatgatctccaactttcacctc 1210391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 7813996 - 7813911
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||| |||||| | ||||||||||||||||| ||| ||  |||||||| |||| | |||||||||||||||||||  ||||||||||    
T  7813996 gactacatcatctgcaaaaaacatacatctcaatgttaattcttggat-tgttttttaagtacatccaaaactaaaataaaaagata 7813911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 321
Target Start/End: Complemental strand, 27445670 - 27445545
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    |||||||||| |||  ||||||  ||||| ||| || |||||||||||||||||| |||| || ||||||||||  ||| |||||  |||||| ||| |     
T  27445670 atttcaaccaaccaacttgaatacgatgatttacatctgcttctatttctccatcattttgtactatggacccaacataattaaaccgtgtaacttgggg 27445571  T
Q  296 aatgatatgatctccaatttttacct 321  Q
     |||||| ||||||||| ||| ||||    
T  27445570 tatgataagatctccaactttcacct 27445545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 7814119 - 7814067
Alignment:
Q  343 ttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaag 395  Q
    ||||||| |||||| |||||||||||| ||||||||||||||| | |||||||    
T  7814119 ttttgctgaaattacatttcatatactctgtcttgcttctactcaagcggaag 7814067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 609
Target Start/End: Original strand, 16142675 - 16142771
Alignment:
Q  514 aaaactaaggtaaaaagatatggacttaggtt-gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacac 609  Q
    |||||||| ||||||||||| || |||||||| || | ||||||||||| |||||||||| |||||| |||| | | |||||| | | |||||||||    
T  16142675 aaaactaaagtaaaaagataaggtcttaggtttgacctttgatgcaatcctattgttacgagaaaattgttgataatctcatcttacatcctcacac 16142771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 16273417 - 16273519
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatacta 370  Q
    |||||||||||||||||| ||||   |||||||||||||||| ||| | ||||||  |  || || ||| ||||||| | |||||| ||| |||||||||    
T  16273417 gatatttaaattgtgtaacttgt---atgatatgatctccaactttcatctctaaggtcaaactatttcatcttttgttgaaattacattacatatacta 16273513  T
Q  371 tgtctt 376  Q
    ||||||    
T  16273514 tgtctt 16273519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 8671692 - 8671494
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    |||| |||||||||  ||||||  ||||| ||| || ||||||||||||| | || |||| ||  | ||||||| ||||||||||  |||||| ||  |     
T  8671692 attttaaccacccagcttgaatacgatgacttacatctgcttctatttcttcgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttaggg 8671593  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||  || |||  ||| |||| || ||| ||| ||||||||  |||||||||||||| | ||||||    
T  8671592 tatgatatgatctccaactttcacctccaaggtagacctacttctccttctgctgaagttacattccatatactccgtcttgcttctactcaagcggaa 8671494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 43240891 - 43241017
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || |||||| |||||||| || |||| ||  | ||| ||| ||||||||||  |||||| ||| |     
T  43240891 atttcaaccacccagcttgaatatgatggcttacatctgcttccatttctccgtcattttgtacgaaggatccaagatatttaaaccgtgtaacttgggg 43240990  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  43240991 tatgatatgatctccaactttcacctc 43241017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 51601830 - 51601704
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||| ||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  51601830 atttccaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 51601731  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  51601730 tatgatatgatctccaactttcacctc 51601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 52421114 - 52421008
Alignment:
Q  284 tgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttcta 383  Q
    ||||| |||||  ||||||||||||| || ||| |||| |||  |||| ||| |||  |||||||| |||||  ||||||||||  |||||||||||| |    
T  52421114 tgtaacttgtggcatgatatgatctctaactttcacctataaggtagagatacttcaccttttgctgaaattccatttcatatatcatgtcttgcttcaa 52421015  T
Q  384 cttaggc 390  Q
    |||||||    
T  52421014 cttaggc 52421008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 520
Target Start/End: Original strand, 38205425 - 38205505
Alignment:
Q  440 caagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaacta 520  Q
    |||||||||||  ||||||| ||||||||||| |||||| | | | ||||||||| ||||   ||| ||||||||||||||    
T  38205425 caagtaggactatatcatttacaaaaaacatatatctcggttcaaactcttggatatgttacgtaactacatccaaaacta 38205505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 462 - 619
Target Start/End: Original strand, 15216068 - 15216226
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaat 560  Q
    ||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| |||||||||||| |||| |    
T  15216068 aaaaaacatacatctcggtgctaactcttggatgtgttctgtcagtacatccaaaactaaagtaaaaagataaggacttagggttgatccttggtgcagt 15216167  T
Q  561 catattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagc 619  Q
    | |||||||| |||||||||   |||  ||||||| ||||||||||||| ||| |||||    
T  15216168 cctattgttatgggaaaatctacggtatcctcatcctgcgtcctcacactagtcgaagc 15216226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 447 - 652
Target Start/End: Original strand, 36566022 - 36566228
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  36566022 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 36566121  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| |  ||   |||||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| |    
T  36566122 gacccttggtgcaatcctattgttatgggaaaatcttcagtagtctcatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagccc 36566221  T
Q  646 gaatata 652  Q
     ||||||    
T  36566222 taatata 36566228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 447 - 619
Target Start/End: Original strand, 42854794 - 42854967
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||||| || |||||||||||||| ||||||||||| ||||||| ||||    
T  42854794 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttctatcaggacatccaaaactaaagtaaaaagataaggacttagggtt 42854893  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagc 619  Q
    || ||||| |||| || ||||||||  ||||||||   |||  | ||||| ||||||||||||| ||| |||||    
T  42854894 gacccttggtgcagtcctattgttataggaaaatctacggtatcttcatcctgcgtcctcacactagtcgaagc 42854967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 462 - 652
Target Start/End: Complemental strand, 36544638 - 36544447
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaat 560  Q
    ||||| ||||||||||  ||||| ||||||||||||||  || | ||||||||||||||| ||||||||||| | ||||| |||||| ||||| ||||||    
T  36544638 aaaaagcatacatctcagtgctaactcttggatgtgttgcatcaatacatccaaaactaaagtaaaaagataagaacttagggttgacccttggtgcaat 36544539  T
Q  561 catattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatata 652  Q
    | |||||||| ||||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  || || ||||||||||| | ||||||    
T  36544538 cctattgttatgggaaaatcttcggtagtcccatcctgcgtcctcacactagtcgaagctccctcatatatatccttgatagccctaatata 36544447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 447 - 580
Target Start/End: Original strand, 12492623 - 12492757
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactt-aggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| | |||| || ||    
T  12492623 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataagaacttaagatt 12492722  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatc 580  Q
    || ||||| ||||||| |||||||| || ||||||    
T  12492723 gacccttggtgcaatcctattgttatggaaaaatc 12492757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 239 - 385
Target Start/End: Complemental strand, 38667286 - 38667142
Alignment:
Q  239 tatttctccatcgttttatattatggacccatgatatttaaat-tgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataat 337  Q
    |||||||| |||||||| || |||| ||||| ||||||||||  | ||||| ||||   |||||||||||||||| ||| |||||||  |||||| || |    
T  38667286 tatttctctatcgttttgtactatgaacccaagatatttaaaactttgtaacttgt---atgatatgatctccaagtttcacctctaggatagaactact 38667190  T
Q  338 tcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    ||| |||||||||||| || ||| ||||||| ||||||||||||||||    
T  38667189 tcgccttttgctaaaactacattacatataccatgtcttgcttctact 38667142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 437 - 580
Target Start/End: Original strand, 41445074 - 41445219
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaa-aagatatg 535  Q
    |||||||||||||| |||||| | ||||||| | |||||||| |||||||| |||||||||||   ||| ||||||||||| ||| ||||| || ||| |    
T  41445074 ctccaagtaggactacatcatctacaaaaaatagacatctcggtgctagcttttggatgtgtttcgtaattacatccaaaattaaagtaaacaaaataag 41445173  T
Q  536 gactta-ggttgatccttgatgcaatcatattgttacgggaaaatc 580  Q
    | |||| |||| | ||||| | |||||||||||||| |||||||||    
T  41445174 ggcttagggttaacccttggtacaatcatattgttatgggaaaatc 41445219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 395
Target Start/End: Original strand, 41444849 - 41445013
Alignment:
Q  232 ttgcttctatttctccatcgttttatattatgga-cccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatag 330  Q
    |||||||||||||| |||| |||| ||| || || |||| ||||||||||    |||| |||||  |||||||||||||||  ||| ||||||||  |||    
T  41444849 ttgcttctatttctacatcattttgtatcattgaacccaagatatttaaaccaagtaacttgtggtatgatatgatctccacctttcacctctaagttag 41444948  T
Q  331 aaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaag 395  Q
    ||||  |||| ||||||||||||||| ||| |||||||| | |||||||| |||| | |||||||    
T  41444949 aaatgcttcgccttttgctaaaattacattccatatactttatcttgcttttactcatgcggaag 41445013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 385
Target Start/End: Complemental strand, 36544924 - 36544735
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| || ||||||||||||||| || |||| ||  |  | |||||||||||||||   ||||| ||| |     
T  36544924 atttcaaccacccaacttgaatacgatgacttacatctgcttctatttctccgtcattttgtacgaaagccccatgatatttaaaccttgtaacttgggg 36544825  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
     |||||||||||||||| ||| ||||| ||  ||||  || |||  |||  |||||| ||| ||| |||||||| |||||||||||||||    
T  36544824 tatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctaaagttacattccatatactctgtcttgcttctact 36544735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 312
Target Start/End: Original strand, 4033004 - 4033120
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||| ||| || ||||| |||||||||||| || | || |||| ||||| |||| |||||  |||||| ||| |     
T  4033004 atttcaaccacccaacttgaatatgatgatttacatatgcttttatttctccatcattgtgtactatgaacccaagatacttaaaccgtgtaacttgggg 4033103  T
Q  296 aatgatatgatctccaa 312  Q
     ||||||||||||||||    
T  4033104 tatgatatgatctccaa 4033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 382
Target Start/End: Complemental strand, 25985273 - 25985128
Alignment:
Q  235 cttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaat 334  Q
    |||||||||||||||  |||| || ||| || |||  |||||||||  |||||| |||||  |||||||||||  ||| ||| ||||||||  |||||||    
T  25985273 cttctatttctccatatttttgtactatagatccaatatatttaaaccgtgtaacttgtggtatgatatgatc--caactttcacctctaagctagaaat 25985176  T
Q  335 aattcgtcttttgctaaaattatatttcatatactatgtcttgcttct 382  Q
      |||| || |||||||| ||| ||| |||||||| ||||||||||||    
T  25985175 gcttcgcctcttgctaaacttacattccatatactctgtcttgcttct 25985128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 385
Target Start/End: Original strand, 33830767 - 33830929
Alignment:
Q  220 gatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttac 319  Q
    ||||| ||| || ||||| ||||||| | || |||| ||  |||||||||  ||||||||| ||||||| || |   |||||| ||| ||||| ||| |     
T  33830767 gatgatttacatatgcttttatttcttcgtcattttgtacaatggacccaaaatatttaaactgtgtaacttat---atgataagatatccaactttcat 33830863  T
Q  320 ctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
     |||||  ||||| || |||||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  33830864 gtctaaggtagaactacttcgtcgtttgctaaaattacattacatatactatgttttgcttctact 33830929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 196 - 311
Target Start/End: Original strand, 42854514 - 42854629
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| || |||||||||||||| | | |||| ||  ||||||||| ||||||||||  |||||| ||| |     
T  42854514 atttcaaccacccagcttgaatacgatgatttacatctgcttctatttctcaaacattttgtacgatggacccaagatatttaaaccgtgtaacttgggg 42854613  T
Q  296 aatgatatgatctcca 311  Q
     |||||||||||||||    
T  42854614 tatgatatgatctcca 42854629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 529
Target Start/End: Original strand, 30579002 - 30579092
Alignment:
Q  440 caagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatc-caaaactaaggtaaaaa 529  Q
    |||| |||||| || ||| |||||||| || |||||||  |||||||||||| ||||||||| ||||||||||  |||||||| |||||||    
T  30579002 caagaaggactacaccatcttcaaaaagcaaacatctcagtgctagctcttgtatgtgttctgtaagtacatcaaaaaactaaagtaaaaa 30579092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 36565751 - 36565877
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  36565751 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaaccgtgtaacttgggg 36565850  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  36565851 tatgatatgatctccaactttcacctc 36565877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 3284938 - 3284861
Alignment:
Q  503 taagtacatccaaaactaaggtaaaaagatatggacttag-gttgatccttgatgcaatcatattgttacgggaaaat 579  Q
    |||||||||||||||||||||| |||||||| || ||||| ||||| ||||| ||||||  |||||||| | ||||||    
T  3284938 taagtacatccaaaactaaggtgaaaagataagggcttagtgttgaaccttggtgcaatactattgttatgagaaaat 3284861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 18124932 - 18124878
Alignment:
Q  212 ttgaatttgatgaattatatttgcttctatttctccatcgttttatattatggac 266  Q
    ||||||| ||||| ||| || |||||||||||||||||| |||| ||||||||||    
T  18124932 ttgaattcgatgagttacatctgcttctatttctccatcattttgtattatggac 18124878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 18849700 - 18849754
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaa 325  Q
    ||||||||||  |||||| ||| |  |||||||||||||||||||||||||||||    
T  18849700 gatatttaaaccgtgtaacttggggtatgatatgatctccaatttttacctctaa 18849754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 265 - 385
Target Start/End: Original strand, 28300687 - 28300803
Alignment:
Q  265 acccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcat 364  Q
    ||||| |||||||||| ||||||| ||||   |||||||||||||||  ||| ||||||||  | ||| || ||||||||||| | |||| | |||  ||    
T  28300687 acccaagatatttaaactgtgtaacttgt---atgatatgatctccagctttcacctctaaggtcgaactacttcgtcttttgatgaaatcacattaaat 28300783  T
Q  365 atactatgtcttgcttctact 385  Q
    |||||||||| ||||||||||    
T  28300784 atactatgtc-tgcttctact 28300803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 521
Target Start/End: Original strand, 11130727 - 11130796
Alignment:
Q  453 atcattttcaaaaaac-atacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaa 521  Q
    |||||||||||||||  |||||||| |||||||| | |||||||| ||  ||||||||||| ||||||||    
T  11130727 atcattttcaaaaaaatatacatcttgatgctagattttggatgtctttcataagtacatcaaaaactaa 11130796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 12492389 - 12492478
Alignment:
Q  233 tgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctc 322  Q
    ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |  |||||||||||||||| ||| |||||    
T  12492389 tgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 12492478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 13984258 - 13984202
Alignment:
Q  340 gtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaagt 396  Q
    |||||||||| || ||| ||| |||||||| ||||||||||||||| | ||||||||    
T  13984258 gtcttttgctgaagttacattccatatactctgtcttgcttctactcatgcggaagt 13984202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 461 - 529
Target Start/End: Complemental strand, 38667054 - 38666986
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaa 529  Q
    ||||||| |||||| ||  |||||||| ||||||||||| |  |||||||| ||||||||| |||||||    
T  38667054 caaaaaaaatacatttcagtgctagctattggatgtgttttgcaagtacattcaaaactaatgtaaaaa 38666986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 447 - 652
Target Start/End: Original strand, 51448490 - 51448696
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||||||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  51448490 gactacatcatctgcaaaaagcatacatctcgatgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 51448589  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   | |||| ||||||||||||||||| |||||  |||  ||||| ||||||||||| |    
T  51448590 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcctgcgtcctcacaccagtcgaagctccctcatacatatccttgatagccc 51448689  T
Q  646 gaatata 652  Q
     ||||||    
T  51448690 taatata 51448696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 462 - 652
Target Start/End: Complemental strand, 52138314 - 52138123
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaat 560  Q
    ||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||    
T  52138314 aaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggttgatccttggtgcaat 52138215  T
Q  561 catattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatata 652  Q
      |||||||| ||||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| | ||||||    
T  52138214 tctattgttatgggaaaatcttcggtagtcccatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagccctaatata 52138123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 437 - 561
Target Start/End: Complemental strand, 29817016 - 29816891
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatgg 536  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||| |||| ||||||||| | |||||||||||||| ||||||||||||| || ||    
T  29817016 ctccaagtaggactgtatcatcttcaaaaaacatacatctcggtgctaactctaggatgtgttttgtaagtacatccaaacctaaggtaaaaaggtaagg 29816917  T
Q  537 actta-ggttgatccttgatgcaatc 561  Q
     |||| |||||| ||||| |||||||    
T  29816916 gcttagggttgagccttggtgcaatc 29816891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 196 - 387
Target Start/End: Complemental strand, 48221556 - 48221365
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    |||||||||| |||  ||||||| ||||| ||| || |||||||| |||||  || |||| || |||| | ||| |||||||||| ||||||| |||||     
T  48221556 atttcaaccatccagtttgaattcgatgatttacatatgcttctacttctctgtcattttgtactatgaatccaagatatttaaaatgtgtaacttgtgg 48221457  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctactta 387  Q
     |||||||||||| ||| ||| |||||||| |||||| || | |  |||||||| |||||| ||| ||||||||||||||| ||||||||||    
T  48221456 tatgatatgatcttcaactttcacctctaagatagaactactacaccttttgctgaaattacattacatatactatgtcttacttctactta 48221365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 196 - 387
Target Start/End: Complemental strand, 25191151 - 25190960
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| ||||||||||||||||||||| |||| || ||| |||||| ||||||||||  |||||| ||| |     
T  25191151 atttcaaccacccagcttgaatacgatgatttacatttgcttctatttctccatcattttgtactatagacccaagatatttaaaccgtgtaacttgggc 25191052  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctactta 387  Q
     |||||||||||||||| ||| ||||| ||  ||||   | |||  |||||||| || ||| ||| ||||||||  ||||||||||||||||    
T  25191051 tatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactta 25190960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 464 - 540
Target Start/End: Complemental strand, 9258370 - 9258294
Alignment:
Q  464 aaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactt 540  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||    
T  9258370 aaaacatacatctcggtgctaactcttggatgtgttccgtaagtacatccaaaactaaagtaaaaagataaggactt 9258294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 470 - 658
Target Start/End: Complemental strand, 48221259 - 48221070
Alignment:
Q  470 tacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatg-gacttaggttgatccttgatgcaatcatattgt 568  Q
    ||||||||||||||| |||||||||||||| |  ||||||||| |||||||| |||||||  ||||   || |||||| | |||| ||||||| ||||||    
T  48221259 tacatctcgatgctaactcttggatgtgttttgcaagtacatctaaaactaaagtaaaaatttatgatcctaaggttggttcttggtgcaatcctattgt 48221160  T
Q  569 tacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatataagtaat 658  Q
    || || ||| |||| ||||  | |||| ||| ||||||||| || |||| || |||  ||||| || |||||||||||| ||||||||||    
T  48221159 tatggaaaattcgtcggtggtcgcatcctgcatcctcacactagctgaatccacctcatacatatctttgatagctcgagtataagtaat 48221070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 38849595 - 38849389
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg-tt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||  |||||||| ||||||     ||||||||||||||||   ||||||||| |||||||   ||    
T  38849595 gactacatcatctacaaaaagcatacatctcggtgcttactcttggacgtgttccgcccgtacatccaaaactaaataaaaaagataaggacttacaatt 38849496  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| || ||||| || |||||| |||||  || |||  ||||||||||||| ||| |||||  |||  ||||| |||||||||||||    
T  38849495 gacccttggtgcaatcctactgttatggaaaaatctttggtagccccattttgcgtcctcacactagtcgaagctccctcatacatatccttgatagctc 38849396  T
Q  646 gaatata 652  Q
     ||||||    
T  38849395 taatata 38849389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 396
Target Start/End: Complemental strand, 44395163 - 44395002
Alignment:
Q  235 cttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaat 334  Q
    ||||||||||||  | ||||  || |||||||||  ||||||||||| |||||| ||| |   || |||||||||||| ||| | ||||||| |||||||    
T  44395163 cttctatttctctgttgtttagtactatggacccgagatatttaaatcgtgtaacttgcgttgtggtatgatctccaactttcatctctaaactagaaat 44395064  T
Q  335 aattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaagt 396  Q
      || | ||||||||||| ||  ||| |||||||| | |||||||||||| |||||||||||    
T  44395063 gctttgccttttgctaaagttgcattccatatactctatcttgcttctacataggcggaagt 44395002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 260 - 391
Target Start/End: Complemental strand, 19757776 - 19757645
Alignment:
Q  260 tatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatat 359  Q
    |||||||||| ||||||||||   ||||| ||| |  |||||||||||||||| ||| ||||| ||  ||| | || || | ||||||||||| ||| ||    
T  19757776 tatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcacctccaaggtaggactactttgccttttgctaaagttacat 19757677  T
Q  360 ttcatatactatgtcttgcttctacttaggcg 391  Q
    | |||||||| ||||||||||||||| |||||    
T  19757676 tccatatactctgtcttgcttctactaaggcg 19757645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 43111606 - 43111715
Alignment:
Q  273 tatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatg 372  Q
    |||||||||||||||| || |   |||||||||||||||| | | ||||||||  || || || ||| ||||||||| |||||| ||| |||||||||||    
T  43111606 tatttaaattgtgtaacttat---atgatatgatctccaactgtcacctctaaggtacaactacttcttcttttgctgaaattacattacatatactatg 43111702  T
Q  373 tcttgcttctact 385  Q
    |||| ||||||||    
T  43111703 tcttacttctact 43111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 543
Target Start/End: Original strand, 50630092 - 50630198
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatgg 536  Q
    |||||||||| |||  ||| ||| |||||| ||| || || | ||||||| |||||||||||||  |||||| |||||||||||| ||||||||||| ||    
T  50630092 ctccaagtagaactatatcgtttgcaaaaatcatgcaccttggtgctagcacttggatgtgttccgtaagtaaatccaaaactaaagtaaaaagataagg 50630191  T
Q  537 acttagg 543  Q
     ||||||    
T  50630192 gcttagg 50630198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 27917320 - 27917219
Alignment:
Q  220 gatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttac 319  Q
    ||||| |||||| ||||| ||||||||| || |||| || ||||||| || ||||||||||  |||||| ||| || |||||||||||||||| ||| ||    
T  27917320 gatgatttatatatgcttatatttctccgtcattttgtactatggactcaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcac 27917221  T
Q  320 ct 321  Q
    ||    
T  27917220 ct 27917219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 385
Target Start/End: Original strand, 1448224 - 1448312
Alignment:
Q  297 atgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    |||||||||||||||| ||||||||||||  |||||||  |||  || ||| ||||||| ||||||||||| | |||||| ||||||||    
T  1448224 atgatatgatctccaacttttacctctaagctagaaatgtttcacctcttgttaaaattttatttcatatattttgtctttcttctact 1448312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 376
Target Start/End: Original strand, 32490274 - 32490414
Alignment:
Q  236 ttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaata 335  Q
    |||||||| | | |||| ||||| ||| |||||| || ||||||||||||||| |||||  |||||||||||| ||| ||| | || |||  |||||| |    
T  32490274 ttctattttttcgtcgtcttataatatagacccaagaaatttaaattgtgtaacttgtggtatgatatgatcttcaactttcatctataagttagaaaca 32490373  T
Q  336 attcgtcttttgctaaaattatatttcatatactatgtctt 376  Q
     |||  ||||||||||| ||  |||||||||||| ||||||    
T  32490374 cttcaccttttgctaaacttgcatttcatatactctgtctt 32490414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 437 - 500
Target Start/End: Complemental strand, 19736677 - 19736614
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttc 500  Q
    ||||||| ||||||||||||| | |||||| ||||||||| | ||||| |||||||||||||||    
T  19736677 ctccaagcaggactgcatcatctgcaaaaagcatacatcttggtgctaactcttggatgtgttc 19736614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 437 - 500
Target Start/End: Complemental strand, 19757495 - 19757432
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttc 500  Q
    ||||||| ||||||||||||| | |||||| ||||||||| | ||||| |||||||||||||||    
T  19757495 ctccaagcaggactgcatcatctgcaaaaagcatacatcttggtgctaactcttggatgtgttc 19757432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 26592236 - 26592302
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaa 528  Q
    |||||||||||||| | |||||| |||||||| ||||||| ||||||||||| ||| ||| ||||||    
T  26592236 aaaaaacatacatcacaatgctaactcttggacgtgttctgtaagtacatcccaaagtaaagtaaaa 26592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 38849866 - 38849740
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||   |||  ||| || ||||||||||||||| || |||| || | |||||||| ||||||||||  |||||| ||| |     
T  38849866 atttcaaccacccagcttgaatacaatggcttacatctgcttctatttctccgtcattttgtactgtggacccaagatatttaaaccgtgtaaattgagg 38849767  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  38849766 tatgatatgatctccaactttcacctc 38849740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 47542221 - 47542347
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  47542221 atttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 47542320  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||| ||||||||||| ||| |||||    
T  47542321 tatgaaatgatctccaactttcacctc 47542347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 51448219 - 51448417
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  |||   ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  51448219 atttcaaccacccagcttgaatacgatagcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 51448318  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||  || |||  |||  ||| || ||| ||||||||||||  |||||||||||||| | ||||||    
T  51448319 tatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacatttcatatactccgtcttgcttctactcaagcggaa 51448417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 30724411 - 30724508
Alignment:
Q  297 atgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
    ||||||||||||||||  || |||| ||||  ||||| | || | |||||||||| | || |||||||||||| ||| |||||||| |||||||||||    
T  30724411 atgatatgatctccaacgttcacctataaacgagaaacactttgccttttgctaataatacatttcatatactttgttttgcttcttcttaggcggaa 30724508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 385
Target Start/End: Original strand, 1470708 - 1470796
Alignment:
Q  297 atgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    |||||||||||||||| ||| ||||||||   | |||| ||||  || ||||||||||| ||||||||||||| ||||||  |||||||    
T  1470708 atgatatgatctccaactttcacctctaagcaataaatgattcacctcttgctaaaattttatttcatatactctgtctttattctact 1470796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 396
Target Start/End: Complemental strand, 15750973 - 15750810
Alignment:
Q  233 tgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaa 332  Q
    |||||| || ||||| |||||||  |||||| |||||  || |||||||  ||||||||| ||  | ||||||||||||| ||| |  | ||| ||| ||    
T  15750973 tgcttcgatgtctccttcgttttgcattatgaacccaaaatgtttaaatcatgtaatttgagatgtcatatgatctccaactttcaaatgtaagataaaa 15750874  T
Q  333 ataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaagt 396  Q
     || || | |||||||| |||||| ||| |||||||| | |||| ||||||||||||| |||||    
T  15750873 ctactttgccttttgctgaaattacattccatatactttatcttacttctacttaggcagaagt 15750810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 19757610 - 19757559
Alignment:
Q  342 cttttgctaaaattatatttcatatactatgtcttgcttctacttaggcgga 393  Q
    ||||||||||| ||| ||| |||||||| ||||||||||||||| |||||||    
T  19757610 cttttgctaaagttacattccatatactctgtcttgcttctactaaggcgga 19757559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 26490066 - 26489975
Alignment:
Q  219 tgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctcc 310  Q
    |||||| ||| || ||||||||||||||| || |||||||| ||||| ||| |||||||||||  ||||| |||    ||||||||||||||    
T  26490066 tgatgatttacatctgcttctatttctccgtcattttatatcatggaaccaagatatttaaatcatgtaacttggagtatgatatgatctcc 26489975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 522
Target Start/End: Complemental strand, 805462 - 805377
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaag 522  Q
    ||||||||||||| | ||||| | ||||||  |||||||| |  ||| ||||||||||||||||  |||| |||||| ||||||||    
T  805462 ctccaagtaggaccgtatcatatgcaaaaagtatacatcttggcgcttgctcttggatgtgttccgtaagcacatcccaaactaag 805377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 500
Target Start/End: Complemental strand, 25190880 - 25190827
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttc 500  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||    
T  25190880 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttc 25190827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 397
Target Start/End: Original strand, 26592022 - 26592147
Alignment:
Q  272 atatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactat 371  Q
    ||||||||| ||| |||  ||||  |||||||| | ||||| ||| |||||||| ||||||||| |  ||||||||||||||||  ||| ||| |  |||    
T  26592022 atatttaaaatgtataacatgtggtatgatatgttatccaactttcacctctaagatagaaatattctgtcttttgctaaaattgcattccatttgttat 26592121  T
Q  372 gtcttgcttctacttaggcggaagtt 397  Q
     ||||| ||||||| | |||||||||    
T  26592122 atcttgtttctactcatgcggaagtt 26592147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 11593454 - 11593248
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  11593454 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 11593355  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   |||||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| |    
T  11593354 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtctcatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagccc 11593255  T
Q  646 gaatata 652  Q
     ||||||    
T  11593254 taatata 11593248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 652
Target Start/End: Original strand, 46356637 - 46356838
Alignment:
Q  452 catcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatcc 550  Q
    |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| |||||| ||    
T  46356637 catcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggttgaccc 46356736  T
Q  551 ttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaata 650  Q
    ||| ||||||| |||||||| ||||||||| |||||   | |||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| | ||||    
T  46356737 ttggtgcaatcctattgttatgggaaaatctttggtagtcccatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagccctaata 46356836  T
Q  651 ta 652  Q
    ||    
T  46356837 ta 46356838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 49028782 - 49028576
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||| | ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  49028782 gactacatcatctgcaaaaagcatacatcttggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 49028683  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   | |||| | ||||||||||| ||| |||||  |||  ||||| ||||||||||| |    
T  49028682 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcctacgtcctcacactagtcgaagctccctcatacatatccttgatagccc 49028583  T
Q  646 gaatata 652  Q
     ||||||    
T  49028582 taatata 49028576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 447 - 609
Target Start/End: Complemental strand, 32630109 - 32629946
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | ||||||||||||||||  ||||||||||| ||||||| ||||    
T  32630109 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgttagtacatccaaaactagagtaaaaagataaggacttagggtt 32630010  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacac 609  Q
    || ||||| |||| || |||||||| |||||||||   |||  || |||| |||||||||||||    
T  32630009 gacccttggtgcagtcctattgttatgggaaaatctacggtatccccatcctgcgtcctcacac 32629946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 580
Target Start/End: Original strand, 33350587 - 33350721
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||| ||| ||||    
T  33350587 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggagttagggtt 33350686  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatc 580  Q
    || ||||| ||||||| |||||||| |||||||||    
T  33350687 gacccttggtgcaatcctattgttatgggaaaatc 33350721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 36651495 - 36651289
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | |||||| |||||||| ||||||||||| ||||||| ||||    
T  36651495 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatctaaaactaaagtaaaaagataaggacttagggtt 36651396  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||| | | |||   | |||| ||||||||||||| ||| ||| |  |||  ||||| ||||||||||| |    
T  36651395 gacccttggtgcaatcctattgttatgggaaaaacttcggtagtcccatcctgcgtcctcacactagtcgaaactccctcatacatatccttgatagccc 36651296  T
Q  646 gaatata 652  Q
     ||||||    
T  36651295 taatata 36651289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 580
Target Start/End: Original strand, 39907160 - 39907294
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| || |||||||| ||||||| ||||    
T  39907160 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtgaaaagataaggacttagggtt 39907259  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatc 580  Q
    || ||||| ||||||| |||||||| |||||||||    
T  39907260 gacccttggtgcaatcctattgttatgggaaaatc 39907294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 43793803 - 43793938
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaa-catacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatg 535  Q
    ||||||||||||||  ||||||| ||||||| ||||||||| | |||| ||||||||||||||| | ||||||||||||| |||||||| |||||||| |    
T  43793803 ctccaagtaggactatatcatttgcaaaaaagcatacatcttggtgctcgctcttggatgtgttttgtaagtacatccaacactaaggtgaaaagataag 43793902  T
Q  536 gacttag-gttgatccttgatgcaatcatattgtta 570  Q
    | ||||| ||| | ||||| ||||||| ||||||||    
T  43793903 ggcttagtgttcaaccttggtgcaatcttattgtta 43793938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 36870070 - 36870164
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta 541  Q
    |||| |||||| | |||||| ||||||||||| |||||||||||||||||||||  | ||||||||||||||||| ||||||||||| |||||||    
T  36870070 gactacatcatctgcaaaaagcatacatctcggtgctagctcttggatgtgttccgtcagtacatccaaaactaaagtaaaaagataaggactta 36870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 469 - 609
Target Start/End: Complemental strand, 38897090 - 38896949
Alignment:
Q  469 atacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaatcatattg 567  Q
    |||||||||| ||||| |||||||||||||||  | | ||||||||||||||| | ||||||||| ||||||| |||||| ||||| ||||||| |||||    
T  38897090 atacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagcaaaaagataaggacttagggttgacccttggtgcaatcctattg 38896991  T
Q  568 ttacgggaaaatcgttggtgacctcatcgtgcgtcctcacac 609  Q
    ||| ||||||||| | |||   | |||| |||||||||||||    
T  38896990 ttatgggaaaatcttcggtagtcccatcctgcgtcctcacac 38896949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 38606777 - 38606580
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||| | || |||| || |||||||||| ||||||||||  |||||| ||| ||    
T  38606777 atttcaaccacccagcttgaatacgatggtttacatctgcttctatttcttcgtcattttgtactatggacccaagatatttaaaccgtgtaacttggga 38606678  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||   | |||  ||||||| ||||||| ||| ||||||||  |||||||||||||| ||||||||    
T  38606677 tatgatatgatctccaactttcacctc-aaggtagacccacttctccttttgcaaaaattacattccatatactccgtcttgcttctactcaggcggaa 38606580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 608
Target Start/End: Original strand, 24426284 - 24426432
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaa 559  Q
    ||||||| |||||||||||||||| |||||  |||||||  |||||||||||||||| ||  ||||||||||| | ||||| |||||| ||||| |||||    
T  24426284 caaaaaatatacatctcgatgctaactcttaaatgtgttgcataagtacatccaaaattatagtaaaaagataagcacttatggttgacccttggtgcaa 24426383  T
Q  560 tcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcaca 608  Q
    |||| ||||||  | |||||| |  || |||||||| ||| ||||||||    
T  24426384 tcatgttgttatagaaaaatcatcagtaacctcatcttgcatcctcaca 24426432  T

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Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 38606525 - 38606415
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaa 559  Q
    |||||| ||||||||| | ||||| |||||||||||||||| | ||||||||||||||||| | ||||||||| ||||| | |||||| ||||| ||||     
T  38606525 caaaaagcatacatcttggtgctaactcttggatgtgttctgtcagtacatccaaaactaaagcaaaaagataaggactaagggttgacccttggtgcag 38606426  T
Q  560 tcatattgtta 570  Q
    || ||||||||    
T  38606425 tcctattgtta 38606415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 20499585 - 20499486
Alignment:
Q  472 catctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaatcatattgtta 570  Q
    ||||||| |||||||||||||||||||||   |||||||||||||| ||| ||||||||||| || |||| |||| | ||||| ||||||| ||||||||    
T  20499585 catctcggtgctagctcttggatgtgttccgcaagtacatccaaaagtaaagtaaaaagataagggcttatggttcaaccttggtgcaatcctattgtta 20499486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 242 - 394
Target Start/End: Complemental strand, 32630333 - 32630181
Alignment:
Q  242 ttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgt 341  Q
    ||||||||| |||| || |||||||||| ||||||||||  |||||| ||| |  |||||||||||||||| ||| ||||| ||  ||||   | |||      
T  32630333 ttctccatcattttgtaatatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacccacttctc 32630234  T
Q  342 cttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
    |||||||| || ||| ||| ||||||||  |||||||||||||| ||||||||    
T  32630233 cttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaa 32630181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 24177983 - 24178072
Alignment:
Q  454 tcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg 543  Q
    |||||| |||||| ||||||||||| ||||| |||||||  ||||||  | |||||||||||||||||  |||||||||| | |||||||    
T  24177983 tcatttgcaaaaagcatacatctcggtgctaactcttgggcgtgttccgtcagtacatccaaaactaaaataaaaagataagaacttagg 24178072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 580
Target Start/End: Original strand, 48055623 - 48055732
Alignment:
Q  472 catctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaatcatattgtta 570  Q
    ||||||| |||||||||||||||||| ||   | |||||||||||| ||| ||||||||||| || |||| |||| | ||||| ||||||| ||||||||    
T  48055623 catctcggtgctagctcttggatgtgctccgcaggtacatccaaaagtaaagtaaaaagataagggcttatggttcagccttggtgcaatcctattgtta 48055722  T
Q  571 cgggaaaatc 580  Q
     || ||||||    
T  48055723 tggaaaaatc 48055732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 312
Target Start/End: Original strand, 24177721 - 24177821
Alignment:
Q  212 ttgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctcca 311  Q
    |||||| |||||| ||| || ||||||||||||||| || |||| || ||| ||||| |||||||||||  |||||| ||| |  |||||||||||||||    
T  24177721 ttgaatatgatgatttacatctgcttctatttctccgtcattttgtactattgacccgtgatatttaaaccgtgtaaattggggtatgatatgatctcca 24177820  T
Q  312 a 312  Q
    |    
T  24177821 a 24177821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 24436514 - 24436594
Alignment:
Q  303 tgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttcta 383  Q
    ||||||| || ||| ||||| | |||| ||||| |||| |||||| |||||||| |||||||||||| |||||||||||||    
T  24436514 tgatctcaaactttcacctcaacaataaaaatatttcgccttttgttaaaattacatttcatatactttgtcttgcttcta 24436594  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 521
Target Start/End: Original strand, 21520229 - 21520288
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaa 521  Q
    ||||| ||||||||||| ||||| |||||||||||||||  ||| |||||||||||||||    
T  21520229 aaaaagcatacatctcggtgctaactcttggatgtgttccgtaaatacatccaaaactaa 21520288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 385
Target Start/End: Original strand, 43793592 - 43793739
Alignment:
Q  238 ctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataat 337  Q
    |||||||| | || |||| || ||| |||||| |||||||||| ||||||| | |||  ||||||||||||| || ||| ||||||| | | ||||   |    
T  43793592 ctatttcttcgtcattttgtactatagacccaagatatttaaaatgtgtaactagtggtatgatatgatctctaactttcacctctacactcgaaacgct 43793691  T
Q  338 tcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    ||| || |||||||| ||| ||| | |||||| |||||||||||||||    
T  43793692 tcgcctcttgctaaatttacattccgtatactctgtcttgcttctact 43793739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 37616688 - 37616490
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||   |||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||| |||||| ||| |     
T  37616688 atttcaaccacccagcttgaatacaatggcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaatcgtgtaacttgggg 37616589  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||  ||| ||||| ||  ||||  || |||  ||| |||| || ||| ||| ||||||||  |||||||||||||| | ||||||    
T  37616588 tatgatatgatctccacctttcacctccaaggtagacctacttctccttctgctgaagttacattccatatactccgtcttgcttctactcaagcggaa 37616490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 46356361 - 46356487
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  46356361 atttcaaccacccaacttgaatacgatggcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaaccgtgtaacttgggg 46356460  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  46356461 tatgatatgatctccaactttcacctc 46356487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 11593732 - 11593606
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || |||||||||||||||||| |||| ||  | ||||||| ||||||||||  || ||| ||| |     
T  11593732 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccatcattttgtacgaaggacccaagatatttaaaccgtctaacttgggg 11593633  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||| ||| ||| |||||    
T  11593632 tatgatatgatcttcaactttcacctc 11593606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 521
Target Start/End: Original strand, 23087896 - 23087970
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaa 521  Q
    |||| |||||| | ||||| |||||||||||  ||||| || ||||||||||| | |||||| ||||||||||||    
T  23087896 gactacatcatctgcaaaatacatacatctcagtgctatctgttggatgtgttttgtaagtatatccaaaactaa 23087970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 33350316 - 33350514
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  |  |||||  ||||||||||  |||||| ||| |     
T  33350316 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaagaccctagatatttaaaccgtgtaacttgggg 33350415  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||  || ||| ||||  ||| || ||| ||| ||||||||  |||||||||||||| | ||||||    
T  33350416 tatgatatgatctccaactttcacctccaaggtagacctacttcttcttccgctgaagttacattccatatacttcgtcttgcttctactcaagcggaa 33350514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 36651766 - 36651640
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  | |||| ||| |     
T  36651766 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgcgtaacttgggg 36651667  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  36651666 tatgatatgatctccaactttcacctc 36651640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 18608275 - 18608316
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaa 312  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  18608275 gatatttaaaatgtgtaacttgtgatatgatatgatctccaa 18608316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 18626603 - 18626562
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaa 312  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  18626603 gatatttaaaatgtgtaacttgtgatatgatatgatctccaa 18626562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 18637277 - 18637236
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaa 312  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  18637277 gatatttaaaatgtgtaacttgtgatatgatatgatctccaa 18637236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 18650712 - 18650671
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaa 312  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  18650712 gatatttaaaatgtgtaacttgtgatatgatatgatctccaa 18650671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 500
Target Start/End: Complemental strand, 31004725 - 31004672
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttc 500  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||    
T  31004725 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttc 31004672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 49029002 - 49028913
Alignment:
Q  233 tgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctc 322  Q
    |||||||||||||||||| |||| ||  | ||||||| ||||||||||  |||||| ||| |  ||||| |||||||||| ||| |||||    
T  49029002 tgcttctatttctccatcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatgatctgatctccaactttcacctc 49028913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 439 - 521
Target Start/End: Original strand, 17101259 - 17101338
Alignment:
Q  439 ccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaa 521  Q
    ||||||| ||||  ||||| |||||||| | ||||||||| |||||||| | ||   |||||||| |||||||||||||||||    
T  17101259 ccaagtaagactaaatcatcttcaaaaagcctacatctcggtgctagctatagg---tgttctattagtacatccaaaactaa 17101338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 5e-33; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 461 - 652
Target Start/End: Original strand, 23907097 - 23907289
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaa 559  Q
    |||||| ||||||||||| ||||| ||||||| |||||||  | | ||||||||||||||| ||||||||||| ||||||| |||||| ||||| |||||    
T  23907097 caaaaagcatacatctcggtgctaactcttggttgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggttgacccttggtgcaa 23907196  T
Q  560 tcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatata 652  Q
    || |||||||| ||||||||| | |||   |||||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||||| ||||||    
T  23907197 tcctattgttatgggaaaatcttcggtagtctcatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagctctaatata 23907289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 447 - 672
Target Start/End: Complemental strand, 39707963 - 39707738
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||||||||||| ||| ||| | |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||    
T  39707963 gactacatcatctgcaaaaaacatacatatcggtgcaaactcttggatgtgttctgtaagtacatccaaaactaaagtaaaaagataaggacttagggtt 39707864  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
     | ||||  ||||||| |||||||| ||||||||| ||||| | | |||| ||||||||||| | |||  || |  |||  ||||| |||||||||||||    
T  39707863 aacccttagtgcaatcctattgttatgggaaaatctttggt-agcccatcatgcgtcctcacgctagtcaaaactccctcatacatttccttgatagctc 39707765  T
Q  646 gaatataagtaatccatactcctttct 672  Q
     |||||| | |||||| || |||||||    
T  39707764 taatataggcaatccaaacccctttct 39707738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 461 - 652
Target Start/End: Complemental strand, 435719 - 435527
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaa 559  Q
    |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| |||||| ||||| ||||     
T  435719 caaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggttgacccttggtgcac 435620  T
Q  560 tcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaatata 652  Q
    || |||||||| ||||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| | ||||||    
T  435619 tcctattgttatgggaaaatcttcggtagtcccatcttgcgtcctcacactagtcgaagctccctcatacatatccttgatagccctaatata 435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 447 - 579
Target Start/End: Original strand, 1212088 - 1212221
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| ||||| |||||||| | ||||||||||||||||||| || |||||||| ||||||| ||||    
T  1212088 gactacatcatctccaaaaagcatacatctcggtgctaactcttagatgtgttatgtaagtacatccaaaactaaagtgaaaagataaggacttagggtt 1212187  T
Q  546 gatccttgatgcaatcatattgttacgggaaaat 579  Q
    || ||||| ||||||| |||||||| ||||||||    
T  1212188 gaaccttggtgcaatcctattgttatgggaaaat 1212221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 10775975 - 10776128
Alignment:
Q  242 ttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgt 341  Q
    ||||||||| |||| |||||| |||||| ||||||||||   ||||| |||||  |||||||||||||||| |||  |||||||| |||||| | ||||     
T  10775975 ttctccatcattttgtattatagacccaagatatttaaaccatgtaacttgtggtatgatatgatctccaactttcccctctaaactagaaacatttcgc 10776074  T
Q  342 cttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaag 395  Q
    ||||||||||||||| ||| |||||| |||||| ||||||| || |||||||||    
T  10776075 cttttgctaaaattacattccatatagtatgtcgtgcttctgctcaggcggaag 10776128  T

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Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 447 - 617
Target Start/End: Original strand, 1777796 - 1777967
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | || ||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| || |||||||| ||| ||| ||||    
T  1777796 gactacatcatctgcataaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagttaaaagataaggatttagggtt 1777895  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaa 617  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   | |||| | ||||||||||| |||||||    
T  1777896 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcctacgtcctcacactagttgaa 1777967  T

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Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 507 - 652
Target Start/End: Complemental strand, 53704051 - 53703905
Alignment:
Q  507 tacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctc 605  Q
    ||||||||||||||| ||||||||||| ||||||| |||||| ||||| ||||||| |||||||||||||||||| | |||   | |||| || ||||||    
T  53704051 tacatccaaaactaaagtaaaaagataaggacttagggttgacccttggtgcaatcctattgttacgggaaaatcttcggtagtcccatcctgtgtcctc 53703952  T
Q  606 acaccagttgaagcctcctagtacatgtccttgatagctcgaatata 652  Q
    |||| ||| |||||  |||  ||||| ||||||||||| | ||||||    
T  53703951 acactagtcgaagctccctcatacatatccttgatagccctaatata 53703905  T

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Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 437 - 533
Target Start/End: Original strand, 17666796 - 17666892
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||||| || |||| |||||| |||||||  ||||||||||| |||||| | ||||||||||| | ||||||||||||||||||| |||||||||||    
T  17666796 ctccaattaagactacatcatattcaaaatgcatacatctcggtgctagttgttggatgtgttatgtaagtacatccaaaactaatgtaaaaagata 17666892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 529
Target Start/End: Complemental strand, 42037414 - 42037327
Alignment:
Q  442 agtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaa 529  Q
    |||||||||  ||||| | ||||||| |||||||||| |||| ||||||||||||||| | |||||||||||||||||||||| ||||    
T  42037414 agtaggactatatcatctgcaaaaaaaatacatctcggtgctcgctcttggatgtgttttctaagtacatccaaaactaaggtgaaaa 42037327  T

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Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 27450683 - 27450809
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| || |||||||||||||||||| ||||  | |||||||||| ||||| |||| ||||||| ||| |     
T  27450683 atttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccatcattttgcactatggacccaagatatgtaaactgtgtaacttgggg 27450782  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  27450783 tatgatatgatctccaactttcacctc 27450809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 580
Target Start/End: Original strand, 48623308 - 48623442
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| ||||||||||||||   | | ||||||||||||||| ||||||||||| | ||||| ||||    
T  48623308 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttacgtcaatacatccaaaactaaagtaaaaagataagaacttagggtt 48623407  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatc 580  Q
    || ||||| ||||||| ||||| || | |||||||    
T  48623408 gaaccttggtgcaatcctattgataagagaaaatc 48623442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 271 - 382
Target Start/End: Complemental strand, 33369464 - 33369356
Alignment:
Q  271 gatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatacta 370  Q
    |||||||||||  |||||||||||  ||||||||||||| || |||||| ||||||||| ||||| ||||||||   ||||||||| ||||||||||||     
T  33369464 gatatttaaatcatgtaatttgtggtatgatatgatctctaacttttacatctaaaataaaaatatttcgtctt---ctaaaattacatttcatatactc 33369368  T
Q  371 tgtcttgcttct 382  Q
    | | ||||||||    
T  33369367 tattttgcttct 33369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 196 - 385
Target Start/End: Complemental strand, 41427610 - 41427422
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  || || |||||| ||||||||| || || | || ||||  | || ||||||||| | |||||| ||| |     
T  41427610 atttcaaccacccaacttgaatgtgatgt-ttgtacttgcttatatttctccgtcattctgtactatgagcacaagatatttaagtcgtgtaacttgggg 41427512  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
     |||||||||||| ||||||| || | |||  ||||| || ||||| ||||||| |||||| ||||||||||| ||||||||||||||||    
T  41427511 tatgatatgatcttcaattttcacttttaaggtagaactacttcgttttttgctgaaattacatttcatataccatgtcttgcttctact 41427422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 580
Target Start/End: Original strand, 27450968 - 27451088
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaa 559  Q
    |||||| ||||||||||| || || ||||||||||||||   | ||||||||||||||||| ||||||||| | ||||||| |||||| ||||| ||||     
T  27450968 caaaaagcatacatctcggtgttaactcttggatgtgtttcgttagtacatccaaaactaaagtaaaaagagaaggacttagggttgacccttggtgcag 27451067  T
Q  560 tcatattgttacgggaaaatc 580  Q
    |  |||||||| |||||||||    
T  27451068 ttctattgttatgggaaaatc 27451088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 31960324 - 31960522
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  31960324 atttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaaattgggg 31960423  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||  || |||  |||  ||| || ||| ||| |||||||| ||||||||||||||| | ||||||    
T  31960424 tatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccatatactctgtcttgcttctactcaagcggaa 31960522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 211 - 396
Target Start/End: Complemental strand, 20917739 - 20917554
Alignment:
Q  211 attgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctcc 310  Q
    |||||||| ||||| ||| || || |||||||||||| | |||||||| |||||| |   |||||||||| ||||||| || ||  |||||||||||| |    
T  20917739 attgaattcgatgacttacatatgtttctatttctccgttgttttatactatggagctcggatatttaaactgtgtaacttatggtatgatatgatcttc 20917640  T
Q  311 aatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaagt 396  Q
    || ||| |||  ||| ||| || || | |   ||| ||| ||| |||||| ||||||||||||||| |||||||||| ||||||||    
T  20917639 aactttcacccttaagataaaactactacacatttcgctgaaactatattccatatactatgtcttacttctacttaagcggaagt 20917554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 390
Target Start/End: Complemental strand, 39708192 - 39708035
Alignment:
Q  233 tgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaa 332  Q
    ||||||||||||||| || |||| || ||| |||||| ||||||||||  |  ||| ||| |  || ||||||||||||| ||| ||||| || |||||     
T  39708192 tgcttctatttctccgtcattttgtactatcgacccaagatatttaaaccgcataacttgaggtataatatgatctccaaatttcacctccaagatagac 39708093  T
Q  333 ataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggc 390  Q
     ||||||  |||||||| || ||||||| ||||||||  |||||||||||||| ||||    
T  39708092 ctaattctccttttgctgaagttatattccatatactccgtcttgcttctactcaggc 39708035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 371
Target Start/End: Original strand, 47265748 - 47265889
Alignment:
Q  230 atttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaata 329  Q
    |||||||||||||||||| || ||||||| |||||| ||| |||||||||| | ||||| ||| |  ||||||||| |||||| ||| ||||| ||  ||    
T  47265748 atttgcttctatttctccgtcattttatactatggatccaagatatttaaactatgtaacttggggtatgatatgacctccaactttcacctccaaggta 47265847  T
Q  330 gaaataattcgtcttttgctaaaattatatttcatatactat 371  Q
    ||  || |||  |||||||| || ||| ||||||||||||||    
T  47265848 gacctacttctccttttgctgaagttacatttcatatactat 47265889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 436001 - 435875
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||| ||  ||||||  ||||| ||| || ||||||||||||||| || |||||||  | ||||||| ||||||||||  |||||| ||| |     
T  436001 atttcaaccactcagcttgaatacgatgacttacatctgcttctatttctccgtcattttatacgaaggacccaagatatttaaaccgtgtaacttgggg 435902  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  435901 tatgatatgatctccaactttcacctc 435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 294
Target Start/End: Complemental strand, 3273194 - 3273096
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtg 294  Q
    |||||||||| |||  ||||||| ||||  ||||||||||||||||||||   ||||||| || |||||||| | ||| |||||||||||||| |||||    
T  3273194 atttcaaccatccaacttgaattcgatggtttatatttgcttctatttctttgtcgttttgtactatggacctaagatgtttaaattgtgtaacttgtg 3273096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 582
Target Start/End: Original strand, 10776190 - 10776336
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatgg 536  Q
    ||||| ||||||||  ||||| | |||||| ||||||||| | ||   ||||||| ||||||||  |||||||||||||||||||  | |||||||| ||    
T  10776190 ctccatgtaggactatatcatctgcaaaaagcatacatcttggtgtccgctcttgaatgtgttccgtaagtacatccaaaactaaaatgaaaagataagg 10776289  T
Q  537 acttag-gttgatccttgatgcaatcatattgttacgggaaaatcgt 582  Q
     ||| | ||||| ||||| ||||||| |||||| | |||||||||||    
T  10776290 gcttggtgttgaaccttggtgcaatcctattgtcatgggaaaatcgt 10776336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 298 - 396
Target Start/End: Complemental strand, 25867261 - 25867163
Alignment:
Q  298 tgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaagt 396  Q
    |||||||||||  || ||| ||||||||| ||| ||   |||| ||||| ||||||||| |||||||||  |||||||||||||| |||||||||||||    
T  25867261 tgatatgatcttgaactttcacctctaaactagtaacgcttcgccttttcctaaaattacatttcatatgttatgtcttgcttctgcttaggcggaagt 25867163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 33226981 - 33226855
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  33226981 atttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 33226882  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  33226881 tatgatatgatctccaactttcacctc 33226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 48623037 - 48623163
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||| |||||||||| |     
T  48623037 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaatcgtgtaatttgggg 48623136  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||| ||||||| ||| |||||    
T  48623137 tatgatatgctctccaactttcacctc 48623163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 1629203 - 1629090
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||| ||  ||||||  ||||| ||| || |||||||||||||||||||||||||| |||| |  || |||||||||| | ||||| |||||     
T  1629203 atttcaaccactcaagttgaatacgatgatttacatctgcttctatttctccatcgttttatactatgaattcaagatatttaaactatgtaacttgtgg 1629104  T
Q  296 aatgatatgatctc 309  Q
     | |||||||||||    
T  1629103 cacgatatgatctc 1629090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 561
Target Start/End: Complemental strand, 3272916 - 3272815
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaa 559  Q
    |||||| |||||||||| |||||| | ||| |||  ||||||||| || |||||||||||| ||||||| |||  |||||| |||||||||||| |||||    
T  3272916 caaaaagcatacatctcaatgctaacgcttagattcgttctataaatagatccaaaactaatgtaaaaatataaagacttagggttgatccttggtgcaa 3272817  T
Q  560 tc 561  Q
    ||    
T  3272816 tc 3272815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 512
Target Start/End: Complemental strand, 16002401 - 16002350
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatc 512  Q
    |||||||||||||||||| ||||| |||||||||||||||  ||||||||||    
T  16002401 caaaaaacatacatctcggtgctaactcttggatgtgttccgtaagtacatc 16002350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 39754920 - 39755011
Alignment:
Q  235 cttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaa 326  Q
    |||||||||||   ||||||| || ||| ||||||||||||||||| ||||| | |||||  |||||||||||| ||| ||| |||||||||    
T  39754920 cttctatttctttgtcgttttgtactatagacccatgatatttaaagtgtgtgacttgtggtatgatatgatcttcaactttcacctctaaa 39755011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 322
Target Start/End: Complemental strand, 56375063 - 56374936
Alignment:
Q  195 aatttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtg 294  Q
    |||||||||||||||  ||||||  ||||  |||||| ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |    
T  56375063 aatttcaaccacccagcttgaatacgatggcttatatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggg 56374964  T
Q  295 aaatgatatgatctccaatttttacctc 322  Q
      |||||||| ||||||| ||| |||||    
T  56374963 gtatgatatgctctccaactttcacctc 56374936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 1777525 - 1777651
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| |||||||||||||||||  || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  1777525 atttcaaccacccagcttgaatacgatgacttacatttgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaacgtgtaacttgggg 1777624  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||| ||||| ||| |||||    
T  1777625 tatgatatgatttccaactttcacctc 1777651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 17668104 - 17668190
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||| |||||| ||||||| |||||||||| | |||||| | |||||||||||   |||||||| ||||||| || |||||||||||    
T  17668104 gactacatcatcttcaaaacacatacatcttggtgctagttgttggatgtgtttcgtaagtacacccaaaacaaatgtaaaaagata 17668190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 23906811 - 23906937
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  23906811 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 23906910  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  23906911 tatgatatgatctccaactttcacctc 23906937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 519
Target Start/End: Original strand, 35556092 - 35556173
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaact 519  Q
    ||||||||||||||  ||||| | |||||| ||||||| | | |||| ||||||||| ||||||| |||||||||||||||||    
T  35556092 ctccaagtaggactatatcatctacaaaaagcatacatttgg-tgctcgctcttggaggtgttctgtaagtacatccaaaact 35556173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 55769198 - 55769244
Alignment:
Q  487 tcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||    
T  55769198 tcttggatgtgttccataaatacatccaaaactaaagtaaaaagata 55769244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 542
Target Start/End: Complemental strand, 15183566 - 15183461
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatgg 536  Q
    |||||||| |||||  ||||| | ||||||||||| || | | |||| |||||||||||| || | ||| ||||||||||||||| || |||||||| ||    
T  15183566 ctccaagttggactatatcatatgcaaaaaacatatatattggtgctcgctcttggatgtattatgtaaatacatccaaaactaaagtgaaaagataagg 15183467  T
Q  537 acttag 542  Q
     |||||    
T  15183466 gcttag 15183461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 385
Target Start/End: Original strand, 17666572 - 17666732
Alignment:
Q  220 gatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttac 319  Q
    ||||| ||| |||||||| ||||||| |  | |||| || | || ||||| |||||||||| ||||||| ||||   ||||||||||||| ||  || ||    
T  17666572 gatgatttacatttgcttttatttcttcgacattttgtactttgaacccaagatatttaaactgtgtaacttgt---atgatatgatctctaacgttcac 17666668  T
Q  320 ctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    |||||| ||||||||| |||| |||||| | |||||  ||| ||||||   |||||||||||||||    
T  17666669 ctctaagatagaaatacttcgccttttgatgaaattgcattacatata--ttgtcttgcttctact 17666732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 533
Target Start/End: Complemental strand, 21060260 - 21060188
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    ||||| |||||||| | || | || |||||||||||||| | ||||||||||||||||||| |||||| ||||    
T  21060260 caaaatacatacatttggaagttatctcttggatgtgttatgtaagtacatccaaaactaaagtaaaaggata 21060188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 20917471 - 20917413
Alignment:
Q  483 tagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta 541  Q
    ||||| |||||||||||| |||| || |||||||| || | ||||||||||||||||||    
T  20917471 tagcttttggatgtgttccataaataaatccaaaattaggataaaaagatatggactta 20917413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 501
Target Start/End: Complemental strand, 53707295 - 53707241
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttct 501  Q
    |||| |||||| | |||||| ||||||||||| ||||| ||||||||||||||||    
T  53707295 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttct 53707241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 55833454 - 55833500
Alignment:
Q  487 tcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||||||||||||| ||||  |||||||||||||| |||||||||||    
T  55833454 tcttggatgtgttccataaacacatccaaaactaaagtaaaaagata 55833500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 501
Target Start/End: Complemental strand, 56374791 - 56374737
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttct 501  Q
    |||| |||||| | |||||| ||||||||||| ||||| ||||||||||||||||    
T  56374791 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttct 56374737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 25597933 - 25597997
Alignment:
Q  261 atggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaa 325  Q
    ||||||||| ||||||||| |||||| | |||||  ||  ||||||||||||||||| |||||||    
T  25597933 atggacccaagatatttaagttgtgtgacttgtggtatagtatgatctccaatttttgcctctaa 25597997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 55769034 - 55769086
Alignment:
Q  343 ttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaag 395  Q
    |||||||||||||| |||| ||||||| | | ||| |||||||||||||||||    
T  55769034 ttttgctaaaattacattttatatactctttattgtttctacttaggcggaag 55769086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 55833290 - 55833342
Alignment:
Q  343 ttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaag 395  Q
    |||||||||||||| |||| ||||||| | | ||| |||||||||||||||||    
T  55833290 ttttgctaaaattacattttatatactctttattgtttctacttaggcggaag 55833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 447 - 645
Target Start/End: Original strand, 24584387 - 24584586
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||||||||||||||| || || |||||||||||||||  | ||||||||||||||||| ||||||||||| ||||||| ||||    
T  24584387 gactacatcatctgcaaaaaacatacatctcggtgataactcttggatgtgttccgttagtacatccaaaactaaagtaaaaagataaggacttagggtt 24584486  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| | |||  || |||| |||||| |||||  ||| |||||  |||  ||||| |||||||||||||    
T  24584487 gacccttggtgcaatcctattgttatgggaaaatcttcggtagccccatcctgcgtcttcacagtagtcgaagctccctcatacatatccttgatagctc 24584586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 447 - 672
Target Start/End: Complemental strand, 2610029 - 2609803
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  2610029 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 2609930  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||| ||||||||| |||||   | |||| ||||||||||||| | | |||||   ||  ||||| ||||||||||| |    
T  2609929 gacccttggtgcaatcctattgttatgggaaaatctttggtagtcccatcctgcgtcctcacactaatcgaagctctctcatacatatccttgatagccc 2609830  T
Q  646 gaatataagtaatccatactcctttct 672  Q
     |||||| | ||||| ||| |||||||    
T  2609829 taatataggcaatccttacccctttct 2609803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 462 - 609
Target Start/End: Original strand, 452412 - 452560
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaat 560  Q
    ||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| |||||| ||||| ||||||    
T  452412 aaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggttgacccttggtgcaat 452511  T
Q  561 catattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacac 609  Q
    | |||||||| ||||||||| | |||   |||||| |||||||||||||    
T  452512 cctattgttatgggaaaatcttcggtagtctcatcctgcgtcctcacac 452560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 447 - 609
Target Start/End: Original strand, 38453399 - 38453562
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | ||||| |||||||||||| ||||| |||||||||||||| | | | ||||||||||||||| ||||| ||||  ||||||| ||||    
T  38453399 gactacatcatctgcaaaatacatacatctcggtgctaactcttggatgtgttttgtcaatacatccaaaactaaagtaaagagatgaggacttagggtt 38453498  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacac 609  Q
    || ||||| ||||||| |||||||| ||||||||| | ||| | | |||| |||||||||||||    
T  38453499 gacccttggtgcaatcctattgttatgggaaaatcttcggtaatcccatcctgcgtcctcacac 38453562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 652
Target Start/End: Original strand, 45368406 - 45368612
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| |||||  ||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  45368406 gactacatcatctgcaaaaagcatacatctcggtgctaattcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 45368505  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| |||| || |||||||| |||||||||   |||  || |||| ||| ||||||||| ||| |||||  |||  ||||| |||| ||||||||    
T  45368506 gacccttggtgcagtcctattgttatgggaaaatctacggtatccccatcctgcatcctcacactagtcgaagctccctcatacatatcctggatagctc 45368605  T
Q  646 gaatata 652  Q
     ||||||    
T  45368606 taatata 45368612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 447 - 643
Target Start/End: Complemental strand, 8180296 - 8180099
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| ||||||||||||||   | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  8180296 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgtttcgtcaatacatccaaaactaaagtaaaaagataaggacttatggtt 8180197  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagc 643  Q
    || |||||  |||||| |||||||| ||||||||| | |||     |||| |||| |||||||| ||| |||||  ||| |||||| |||||||||||    
T  8180196 gacccttggcgcaatcctattgttatgggaaaatcttcggtagttccatcctgcgacctcacactagtcgaagctccctcgtacatatccttgatagc 8180099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 11992616 - 11992814
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| || |||||||||||||||||| |||| || ||| |||||| ||||||||||  |||||| ||| |     
T  11992616 atttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagatatttaaaccgtgtaacttgggg 11992715  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||||||  ||||   | |||   |||| || || ||| ||| ||||||||  |||||||||||||| ||||||||    
T  11992716 tatgatatgatctccaactttcacctctaaggtagacccacttctctttttactgaagttacattccatatacttcgtcttgcttctactcaggcggaa 11992814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 45368134 - 45368259
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||| | ||| || |||||||||||||||||| |||| ||||||||||||| ||||||||||  |||||||||| |     
T  45368134 atttcaaccacccagcttgaatacgataatttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaatttg-gg 45368232  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  45368233 tatgatatgatctccaactttcacctc 45368259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 580
Target Start/End: Complemental strand, 876634 - 876521
Alignment:
Q  468 catacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttag-gttgatccttgatgcaatcatatt 566  Q
    ||||||||| | |||| ||||||||||||||||  |||||||||||||||| ||||| |||||||| || ||||| ||||| ||||| ||||||| | ||    
T  876634 catacatcttggtgctcgctcttggatgtgttccgtaagtacatccaaaacgaaggtgaaaagataagggcttagtgttgaaccttggtgcaatcctgtt 876535  T
Q  567 gttacgggaaaatc 580  Q
    |||| |||||||||    
T  876534 gttatgggaaaatc 876521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 486 - 579
Target Start/End: Complemental strand, 16292175 - 16292081
Alignment:
Q  486 ctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaatcatattgttacgggaaaat 579  Q
    |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| || ||||| ||||||||    
T  16292175 ctcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggttgacccttgatgcaatcctaatgttatgggaaaat 16292081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 24584116 - 24584314
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||| ||||||||  |||||| |||||  ||| || ||| | |||||||||||| |||| || |||||||||| ||||||||||  |||||| ||| |     
T  24584116 atttccaccacccagcttgaatatgatggcttaaatctgcctatatttctccatcattttgtactatggacccaagatatttaaaccgtgtaacttgcgg 24584215  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
      ||||||||||||||| ||| ||||| ||  |||| |||||||  |||||||| || ||| ||| ||||||||  |||||| ||||||| | ||||||    
T  24584216 tctgatatgatctccaactttcacctccaaggtagacataattctccttttgctgaagttacattccatatactccgtcttgtttctactcaagcggaa 24584314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 38453130 - 38453256
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||| || |||| ||| | ||||||| ||||||||||| |||||| ||| |     
T  38453130 atttcaaccacccagcttgaatatgatggcttacatatgcttctatttctccgtcattttgtatgaaggacccaagatatttaaatcgtgtaacttgggg 38453229  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  38453230 tatgatatgatctccaactttcacctc 38453256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 13148822 - 13148741
Alignment:
Q  448 actgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaa 529  Q
    |||||||||| | |||||  |||||||||   |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  13148822 actgcatcatctacaaaatgcatacatcttagtgctagctcttggatgtgttctgtaagtacatccaaaactaaagtaaaaa 13148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 197 - 394
Target Start/End: Original strand, 41763560 - 41763757
Alignment:
Q  197 tttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaa 296  Q
    |||||||||||||  ||||||  ||||| ||| || |||||||||||||||  | |||| || |||||||||| ||||||||||| ||| || ||| |      
T  41763560 tttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgacattttgtactatggacccaagatatttaaatcgtgcaacttggggt 41763659  T
Q  297 atgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
    ||||||| |||||||| ||| ||||| ||  ||||   | |||  |||||||| || ||| ||| ||||||||  |||||||||||||| ||||||||    
T  41763660 atgatataatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaa 41763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 221 - 385
Target Start/End: Original strand, 7789074 - 7789238
Alignment:
Q  221 atgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacc 320  Q
    |||| |||||| ||||| ||||||||  |  |||| ||||||| |||||||||||||||| || |||| || ||  || |||||||||| ||  || ||     
T  7789074 atgatttatatatgcttatatttctctgttattttgtattatgaacccatgatatttaaaatgcgtaacttatggtatcatatgatctcaaaccttcaca 7789173  T
Q  321 tctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    |||||| || ||||| ||| |||||| || |||||| |||||||||||| |||||||||| ||||    
T  7789174 tctaaagtataaatacttcatcttttactgaaattacatttcatatactttgtcttgcttttact 7789238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 199 - 395
Target Start/End: Complemental strand, 37281878 - 37281680
Alignment:
Q  199 tcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaat 298  Q
    |||||||||||  ||||||  ||||| ||| || | ||||||||||||| || ||||||| |||||| | | |||||||||| ||||||| ||| |  ||    
T  37281878 tcaaccacccaacttgaataggatgatttacatctacttctatttctccttcattttatactatggagctaagatatttaaaatgtgtaacttggggtat 37281779  T
Q  299 gatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaa--attatatttcatatactatgtcttgcttctacttaggcggaag 395  Q
    || |||||||| || ||| ||||| ||  ||||| || || |||||||| | ||  | || |||||||||||| ||||||||||||||| | |||||||    
T  37281778 gacatgatctcaaactttcacctccaaggtagaactactttgtcttttgttgaagtactacatttcatatactttgtcttgcttctactcaagcggaag 37281680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 2610300 - 2610102
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||  || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  2610300 atttcaaccacccagcttgaatatgatggtttacatctgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 2610201  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||  || |||  ||| |||| || ||| ||||||||||||  |||||||||||||| | ||||||    
T  2610200 tatgatatgatctccaactttcacctccaaggtagacctacttctccttctgctgaagttacatttcatatactccgtcttgcttctactcaagcggaa 2610102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 12475202 - 12475296
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta 541  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||| | |||||||    
T  12475202 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagaaaaggactta 12475296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 569
Target Start/End: Complemental strand, 14769785 - 14769676
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata-tggactta-ggttgatccttgatgcaa 559  Q
    ||||||||||||| | | |||||||||||| ||||||  | ||||||||||||||| ||| |||||||||||  || |||| |||||| ||||| |||||    
T  14769785 aaaaaacatacatattggtgctagctcttgaatgtgtgatgtaagtacatccaaaattaaagtaaaaagatacagggcttagggttgacccttggtgcaa 14769686  T
Q  560 tcatattgtt 569  Q
    ||||||||||    
T  14769685 tcatattgtt 14769676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 12904664 - 12904584
Alignment:
Q  272 atatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaa 352  Q
    |||||||||  |||||| |||||| ||||||||||||||||||| |||||||||| ||||||   |||| |||||||||||    
T  12904664 atatttaaaccgtgtaacttgtgatatgatatgatctccaatttgtacctctaaactagaaacgtttcgccttttgctaaa 12904584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 4807364 - 4807238
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||| ||||||  ||||  ||| || ||||||||||||||| || |||| ||  |  |||||| |||||||||| ||||||| ||| |     
T  4807364 atttcaaccacccatcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaagacccaagatatttaaactgtgtaacttgggg 4807265  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  4807264 tatgatatgatctccaactttcacctc 4807238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 528
Target Start/End: Original strand, 7135445 - 7135533
Alignment:
Q  440 caagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaa 528  Q
    |||| |||||| |||||||| |||||  |||||||||| ||| |||||||||| ||||||   ||||||||||||||| ||| ||||||    
T  7135445 caagcaggactacatcatttgcaaaatgcatacatctcaatggtagctcttggttgtgtttggtaagtacatccaaaattaaagtaaaa 7135533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 14769940 - 14769884
Alignment:
Q  327 atagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttcta 383  Q
    |||||||||||||| |||| |||||||||| ||| |||||||| |||||||||||||    
T  14769940 atagaaataattcgcctttagctaaaattacattccatatactctgtcttgcttcta 14769884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 533
Target Start/End: Original strand, 13593172 - 13593223
Alignment:
Q  482 ctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||||| || |||||||| ||||||||||||||||||||| |||||||||||    
T  13593172 ctagctattagatgtgttttataagtacatccaaaactaatgtaaaaagata 13593223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 385
Target Start/End: Complemental strand, 8180552 - 8180363
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||||||  | |||||||  |||||||||  |||||| |||       
T  8180552 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttataagaaggacccaaaatatttaaaccgtgtaacttggag 8180453  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
     |||||||||||||||| ||| ||||| ||  ||||  || |||  |||   || |||||| ||| |||||||| |||||||||||||||    
T  8180452 tatgatatgatctccaactttcacctccaaggtagacctacttctccttccactgaaattacattccatatactctgtcttgcttctact 8180363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 312
Target Start/End: Original strand, 452132 - 452248
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  452132 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 452231  T
Q  296 aatgatatgatctccaa 312  Q
     ||||||||||||||||    
T  452232 tatgatatgatctccaa 452248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 23866351 - 23866267
Alignment:
Q  272 atatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaatta 356  Q
    |||||||||||||||||||||||  ||||||||||||| || ||| || |||||  ||||| || || | |||||| ||||||||    
T  23866351 atatttaaattgtgtaatttgtggtatgatatgatctctaactttcacatctaagttagaactactttgccttttgttaaaatta 23866267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 524
Target Start/End: Original strand, 33595091 - 33595126
Alignment:
Q  489 ttggatgtgttctataagtacatccaaaactaaggt 524  Q
    ||||||||||| ||||||||||||||||||||||||    
T  33595091 ttggatgtgttttataagtacatccaaaactaaggt 33595126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 13149085 - 13148959
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    |||||||||| |||  ||||||  ||||| || ||| | ||||||||||||| || |||| || ||||||||   ||||||||||  |||||| ||| |     
T  13149085 atttcaaccatccaacttgaatacgatgatttgtatctacttctatttctccgtcattttgtactatggacctgagatatttaaaccgtgtaacttgggg 13148986  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  13148985 tatgatatgatctccaactttcacctc 13148959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 517
Target Start/End: Original strand, 34502106 - 34502164
Alignment:
Q  459 ttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaa 517  Q
    |||||||||||||||||| | |||||||||||| |||||||   || ||||||||||||    
T  34502106 ttcaaaaaacatacatcttggtgctagctcttgcatgtgtttcgtaggtacatccaaaa 34502164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 36038731 - 36038669
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgtt 499  Q
    ||||||| |||||  |||||| ||||||||||||||||||  |||| | ||||||||||||||    
T  36038731 ctccaagcaggacaacatcatcttcaaaaaacatacatcttcatgcaaactcttggatgtgtt 36038669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 526
Target Start/End: Original strand, 7789347 - 7789411
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaa 526  Q
    ||||| ||||||||||||||| ||||||||| ||| || | || |||||| ||||||||| ||||    
T  7789347 aaaaatcatacatctcgatgccagctcttggttgtattttctaggtacattcaaaactaaagtaa 7789411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 297 - 385
Target Start/End: Original strand, 13592959 - 13593047
Alignment:
Q  297 atgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    |||||||||||| ||| ||| ||||||||  | ||| || ||||||||||| | || ||| ||| || |||| ||||||||||||||||    
T  13592959 atgatatgatcttcaactttcacctctaagtttgaactacttcgtcttttgttgaagttacattacacataccatgtcttgcttctact 13593047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 8e-32; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 6082901 - 6082695
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| | ||||| ||||    
T  6082901 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataagaacttagggtt 6082802  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| |||||||||| ||||||| | |||   |||||| ||||||||||||| ||| |||||  |||  ||||| |||||||||| ||    
T  6082801 gacccttggtgcaatcctattgttacgagaaaatcttcggtagtctcatcttgcgtcctcacactagtcgaagctccctcatacatatccttgatagttc 6082702  T
Q  646 gaatata 652  Q
     ||||||    
T  6082701 taatata 6082695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 462 - 619
Target Start/End: Complemental strand, 9706261 - 9706103
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactt-aggttgatccttgatgcaat 560  Q
    ||||| |||||| |||| ||||| ||||||||||||||   | ||||||||||||||||| ||||||||||| |||||| ||||||| ||||| |||| |    
T  9706261 aaaaagcatacaactcggtgctaactcttggatgtgtttcgtcagtacatccaaaactaaagtaaaaagataaggacttaaggttgacccttggtgcagt 9706162  T
Q  561 catattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagc 619  Q
    |||||||||| |||||||||   |||  ||||||| ||||||||||||| ||| |||||    
T  9706161 catattgttatgggaaaatctacggtatcctcatcctgcgtcctcacactagtcgaagc 9706103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 447 - 609
Target Start/End: Complemental strand, 30670389 - 30670226
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| |||||||||| |||||| ||||||||||| |||  | |||||| |||||||||| ||||||||| | ||| ||| ||||    
T  30670389 gactacatcatctgcaaaaagcatacatctcaatgctaactcttggatgtattccgtcagtacacccaaaactaaagtaaaaagacaaggatttatggtt 30670290  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacac 609  Q
    || ||||| ||||||| |||||||| ||||||||| | ||| |||||||| ||| |||||||||    
T  30670289 gacccttggtgcaatcttattgttatgggaaaatcttaggtaacctcatcatgcatcctcacac 30670226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 470 - 586
Target Start/End: Original strand, 2208206 - 2208323
Alignment:
Q  470 tacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg-ttgatccttgatgcaatcatattgt 568  Q
    ||||||| | ||||| |||||||||||||||  ||||||||||||||||||| |||||||| || || |||||| |||| ||||| |||||||||||||     
T  2208206 tacatcttggtgctaactcttggatgtgttccgtaagtacatccaaaactaaagtaaaaaggtaagggcttaggattgacccttggtgcaatcatattga 2208305  T
Q  569 tacgggaaaatcgttggt 586  Q
    || || ||||||||||||    
T  2208306 tatggaaaaatcgttggt 2208323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 447 - 577
Target Start/End: Original strand, 5258931 - 5259063
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggt-aaaaagatatggactta-ggt 544  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | ||||||||||||||||| || ||||||||| ||||||| |||    
T  5258931 gacttcatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcagtacatccaaaactaaagtaaaaaagataaggacttagggt 5259030  T
Q  545 tgatccttgatgcaatcatattgttacgggaaa 577  Q
    | | ||||| ||||||| |||||||| ||||||    
T  5259031 ttacccttggtgcaatcctattgttatgggaaa 5259063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 487 - 609
Target Start/End: Complemental strand, 3629691 - 3629568
Alignment:
Q  487 tcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactt-aggttgatccttgatgcaatcatattgttacgggaaaatcgttgg 585  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||| || ||| ||||||| ||||  ||||||| |||||||| ||||||||||| ||    
T  3629691 tcttgaatgtgttccataagtacatccaaaactaaagtaaaaagataagggcttaaggttgacccttagtgcaatcctattgttatgggaaaatcgtcgg 3629592  T
Q  586 tgacctcatcgtgcgtcctcacac 609  Q
    | |||  ||| ||||| |||||||    
T  3629591 taaccctatcttgcgttctcacac 3629568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 196 - 395
Target Start/End: Original strand, 5258660 - 5258859
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  |||||  || ||  |||||||||||||| || |||| || |||||||||| |||||||||| ||||||| ||| |     
T  5258660 atttcaaccacccagcttgaatacgatgatgtacatcagcttctatttctccgtcattttgtactatggacccaagatatttaaactgtgtaacttgggg 5258759  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaag 395  Q
     |||||||||||||||| ||| || || ||  ||||   | |||  |||||||| || ||| ||| |||||||| ||||||||||||||| |||||||||    
T  5258760 tatgatatgatctccaactttcacttccaaggtagacccacttctccttttgctgaagttacattccatatactttgtcttgcttctactcaggcggaag 5258859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 200 - 394
Target Start/End: Original strand, 10100371 - 10100565
Alignment:
Q  200 caaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatg 299  Q
    ||||||||||  ||||||  ||||| ||||||  ||||||||||||||  | |||| || |||||||||| ||||||||||  |||||| ||| |  |||    
T  10100371 caaccacccagcttgaatacgatgatttatatcagcttctatttctccgacattttgtactatggacccaagatatttaaaccgtgtaacttggggtatg 10100470  T
Q  300 atatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
    ||||||||||||| ||| ||||| ||  ||||  || |||   |||||||||| ||| ||| ||||||||  |||||||||||||| ||||||||    
T  10100471 atatgatctccaactttcacctccaaggtagacctacttctcattttgctaaagttacattccatatactccgtcttgcttctactcaggcggaa 10100565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 541
Target Start/End: Complemental strand, 5631304 - 5631224
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta 541  Q
    |||||||||| ||||||| ||||| |||||||||||||||  | ||||||||||||||||| ||||||||||| |||||||    
T  5631304 caaaaaacatgcatctcggtgctaactcttggatgtgttccgtcagtacatccaaaactaaagtaaaaagataaggactta 5631224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 447 - 579
Target Start/End: Original strand, 20428418 - 20428551
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||| ||||||||  |||||||||||||| |||| |||| ||||||   ||||| ||||    
T  20428418 gactacatcatctgcaaaaagcatacatctcggtgctaactcttgaatgtgttccgtaagtacatccaaagctaaagtaataagataaaaacttagggtt 20428517  T
Q  546 gatccttgatgcaatcatattgttacgggaaaat 579  Q
    || ||||| |||| || |||||||| ||||||||    
T  20428518 gacccttggtgcagtcctattgttatgggaaaat 20428551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 539
Target Start/End: Original strand, 9369171 - 9369274
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaa-aacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatg 535  Q
    ||||||||| ||||  ||||||| ||||| ||||||||||| | |||| ||| |||||||||||   |||||||||||||||||||||| |||||||| |    
T  9369171 ctccaagtaagactatatcatttgcaaaaaaacatacatcttggtgctcgcttttggatgtgtttcgtaagtacatccaaaactaaggtgaaaagataag 9369270  T
Q  536 gact 539  Q
    ||||    
T  9369271 gact 9369274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 541
Target Start/End: Original strand, 2680853 - 2680926
Alignment:
Q  469 atacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggt-aaaaagatatggactta 541  Q
    |||||||||||||||| | |||||||||||| | ||||||||||||||||||| || ||||||||| |||||||    
T  2680853 atacatctcgatgctaacacttggatgtgttatgtaagtacatccaaaactaaagtaaaaaagataaggactta 2680926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 193 - 381
Target Start/End: Complemental strand, 7079909 - 7079728
Alignment:
Q  193 ttaatttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttg 292  Q
    ||||||||||||| |||  |||||||| |||  ||| |||| |||| |||||||||||||||| || ||| |||| | |||||| ||||| ||||| |||    
T  7079909 ttaatttcaaccatccagcttgaattttatggtttagatttccttcaatttctccatcgttttgtactatagacctaagatattcaaattttgtaacttg 7079810  T
Q  293 tgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttc 381  Q
         || ||||||||||||| || |||| |||| |||||||  |||| |||||  | ||||||||||||||||||| ||| |||||||    
T  7079809 -----tggtatgatctccaatgttcacctgtaaattagaaatgcttcg-cttttaat-aaattatatttcatatactttgttttgcttc 7079728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 9706548 - 9706432
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| |  |||||||||||||||||| |||| ||  ||||||||| ||||||||||  |||||| ||| |     
T  9706548 atttcaaccacccagcttgaatacgatgatttacacctgcttctatttctccatcattttgtaccatggacccaagatatttaaaccgtgtaacttgggg 9706449  T
Q  296 aatgatatgatctccaa 312  Q
     ||||||||||||||||    
T  9706448 tatgatatgatctccaa 9706432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 381
Target Start/End: Original strand, 20428146 - 20428331
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||| ||  ||||| ||| || ||||||||||| ||| ||||||| || | ||||||||  |||||||||  | |||| |||||     
T  20428146 atttcaaccacccagcttggatacgatgatttacatctgcttctatttttccgtcgttttgtactgtggacccaatatatttaaaccgcgtaacttgtgg 20428245  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttc 381  Q
     |||||||||||||||| ||| |||||  |  ||||  ||||||  |||||||| || ||| ||| ||||||||  ||||||||||    
T  20428246 tatgatatgatctccaactttcacctcctaggtagacctaattctccttttgctgaagttacattccatatactccgtcttgcttc 20428331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 5631590 - 5631391
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggaccc-atgatatttaaattgtgtaatttgtg 294  Q
    ||||||||||||||  ||||||  ||||| ||| || ||||||||||||||| || |||| || ||||||||| |  |||||||||  |||||| ||| |    
T  5631590 atttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgtcattttgtactatggacccaaaaatatttaaaccgtgtaacttggg 5631491  T
Q  295 aaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
      ||||||||||||| || ||| ||||  ||  ||||   | |||  |||||||| || ||| ||| |||||||| ||||||||||||||| | ||||||    
T  5631490 gtatgatatgatctctaactttcacctgcaaggtagacccacttctccttttgctgaagttacattccatatactttgtcttgcttctactcatgcggaa 5631391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 526
Target Start/End: Complemental strand, 33495708 - 33495629
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaa 526  Q
    |||| |||||| | |||||| |||||||||||||||||  ||||||||||||||  | ||||||| ||||||||| ||||    
T  33495708 gactacatcatatgcaaaaagcatacatctcgatgctaaatcttggatgtgttccgtcagtacattcaaaactaaagtaa 33495629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 582
Target Start/End: Complemental strand, 27790641 - 27790521
Alignment:
Q  463 aaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaatc 561  Q
    |||| ||||||||| ||||||| || |||||||||||  |||||| ||| ||||||||| |||||||| || ||  ||| |||||| ||||| |  ||||    
T  27790641 aaaagcatacatcttgatgctaacttttggatgtgtttcataagtgcattcaaaactaaagtaaaaaggtaagggtttagggttgacccttggtataatc 27790542  T
Q  562 atattgttacgggaaaatcgt 582  Q
     | |||||| |||||||||||    
T  27790541 cttttgttatgggaaaatcgt 27790521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 3632724 - 3632613
Alignment:
Q  260 tatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatat 359  Q
    |||||| ||| ||||||||||| |||||||||  |  |||||||||||||||| ||| ||||| ||  ||||| || ||||| ||||  | |||||||||    
T  3632724 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttgttaaattatat 3632625  T
Q  360 ttcatatactat 371  Q
    |  |||||||||    
T  3632624 tcaatatactat 3632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 2680706 - 2680748
Alignment:
Q  342 cttttgctaaaattatatttcatatactatgtcttgcttctac 384  Q
    |||||||| |||||| |||||||||||| ||||||||||||||    
T  2680706 cttttgctgaaattacatttcatatactctgtcttgcttctac 2680748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 8811840 - 8811940
Alignment:
Q  193 ttaatttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttg 292  Q
    ||||||||||||| |||  |||||| | |||  ||| |||| |||| |||| ||||||||||| || ||| |||| | |||||||||||| ||||| |||    
T  8811840 ttaatttcaaccatccagcttgaatcttatggtttagattttcttcaatttatccatcgttttgtactatagacctaagatatttaaattttgtaacttg 8811939  T
Q  293 t 293  Q
    |    
T  8811940 t 8811940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 447 - 643
Target Start/End: Original strand, 2076255 - 2076452
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  2076255 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 2076354  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagc 643  Q
    || ||||| ||||||| |||||||  ||||||||| | |||   |||||| ||||||||||||| ||| |||||  |||  ||||| |||||||||||    
T  2076355 gacccttggtgcaatcctattgttgtgggaaaatcttcggtagtctcatcatgcgtcctcacactagtcgaagctccctcatacatatccttgatagc 2076452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 452 - 652
Target Start/End: Original strand, 1288375 - 1288576
Alignment:
Q  452 catcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatcc 550  Q
    |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||| ||| ||||||| |||||| ||    
T  1288375 catcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaatataaggacttagggttgaccc 1288474  T
Q  551 ttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctcgaata 650  Q
    ||| ||||||| |||||||| ||||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| | ||||    
T  1288475 ttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagccctaata 1288574  T
Q  651 ta 652  Q
    ||    
T  1288575 ta 1288576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 1274766 - 1274560
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  1274766 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 1274667  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||  |||||||| ||||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  ||||| || |||||||| |    
T  1274666 gacccttggtgcaattctattgttatgggaaaatcttcggtagtcccatcctgcgtcctcacactagtcgaagctccctcatacatatctttgatagccc 1274567  T
Q  646 gaatata 652  Q
     ||||||    
T  1274566 taatata 1274560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 24178025 - 24177819
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||| ||||||| ||||||||||  ||||||| ||||    
T  24178025 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatcccaaactaaagtaaaaagattaggacttagggtt 24177926  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| ||||||| ||||||||  |||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  ||||| |||||||||||||    
T  24177925 gacccttggtgcaatcctattgttatcggaaaatcttcggtagtcccatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagctc 24177826  T
Q  646 gaatata 652  Q
     ||||||    
T  24177825 taatata 24177819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 580
Target Start/End: Complemental strand, 3394212 - 3394078
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    ||||||||||| | |||||| ||||||||||| ||||| |||||||||||||||  | ||||||||||||||||  ||||| ||||| ||||||| ||||    
T  3394212 gactgcatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcagtacatccaaaactagagtaaagagataaggacttagggtt 3394113  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatc 580  Q
     | ||||| ||||||| |||||||| |||||||||    
T  3394112 tacccttggtgcaatcctattgttatgggaaaatc 3394078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 447 - 643
Target Start/End: Complemental strand, 20318492 - 20318295
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggtt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||| |||||||   | | ||||||||||||||| ||||||||||| ||||||| ||||    
T  20318492 gactacatcatctgcaaaaagcatacatctcggtgctaactcttgaatgtgtttcgtcaatacatccaaaactaaagtaaaaagataaggacttagggtt 20318393  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagc 643  Q
    || ||||| ||||||| |||||||| ||||||||| | |||   | |||| ||||||||||||| ||| ||| |  |||  ||||| |||||||||||    
T  20318392 gacccttggtgcaatcctattgttatgggaaaatcttcggtagtcccatcctgcgtcctcacactagtcgaaactccctcatacatatccttgatagc 20318295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 3394482 - 3394285
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| || ||||||||||||||| || |||| || |||||||||| ||||||||||  |||||| ||| |     
T  3394482 atttcaaccacccagcttgaatacgatgatttacatctgcttctatttctccgtcattttgtactatggacccaagatatttaaaccgtgtaacttgggg 3394383  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||   | |||  ||||||||  ||||| ||| |||||||| ||||||||||||||| ||||||||    
T  3394382 tatgatatgatctccaactttcacctccaaggtagacccacttctccttttgct-gaattacattccatatactctgtcttgcttctactcaggcggaa 3394285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 461 - 582
Target Start/End: Complemental strand, 27417 - 27296
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttaggttgatccttgatgcaat 560  Q
    |||||||||||||||||| ||||| ||||||||| || ||   ||||||||||||||| ||  ||||||| || |  |||||||||||||||  ||||||    
T  27417 caaaaaacatacatctcgttgctaactcttggatatggtccgcaagtacatccaaaacaaaaataaaaaggtaagagcttaggttgatccttcgtgcaat 27318  T
Q  561 catattgttacgggaaaatcgt 582  Q
    | ||||||||||||||||||||    
T  27317 cctattgttacgggaaaatcgt 27296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 452 - 579
Target Start/End: Original strand, 12493148 - 12493276
Alignment:
Q  452 catcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatcc 550  Q
    |||||| | |||||| ||||||||| | ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||| ||| |||||| ||    
T  12493148 catcatctgcaaaaagcatacatcttggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggagttagggttgaccc 12493247  T
Q  551 ttgatgcaatcatattgttacgggaaaat 579  Q
    ||| ||||||| |||||||| ||||||||    
T  12493248 ttggtgcaatcctattgttatgggaaaat 12493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 450 - 543
Target Start/End: Complemental strand, 3301347 - 3301254
Alignment:
Q  450 tgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg 543  Q
    |||||||| | |||||| ||||||||||| ||||| |||||||||||||||| | ||||||||||||||||  ||||| ||||| |||||||||    
T  3301347 tgcatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttctgtcagtacatccaaaactagagtaaagagataaggacttagg 3301254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 447 - 543
Target Start/End: Complemental strand, 10638799 - 10638703
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg 543  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| |||||||||    
T  10638799 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttagg 10638703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 3301621 - 3301423
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||  || ||||||||||||||| || |||  || |||||||||| ||||||||||  |||||| ||| |     
T  3301621 atttcaaccacccagcttgaatacgatgatttgcatctgcttctatttctccttcatttggtactatggacccaagatatttaaaccgtgtaacttgggg 3301522  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||   | |||  |||||||| || ||| ||| ||||||||  |||||||||||||| ||||||||    
T  3301521 tatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccatatactccgtcttgcttctactcaggcggaa 3301423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 212 - 530
Target Start/End: Original strand, 43558340 - 43558670
Alignment:
Q  212 ttgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctcca 311  Q
    ||||||| ||||| ||| || ||||||||||||||  | ||||| ||  ||||||| | ||||||||||| |||||| |||||  ||| |||||||||||    
T  43558340 ttgaattcgatgatttacatctgcttctatttctctgtggttttgtacaatggacctaagatatttaaatcgtgtaacttgtggtatgctatgatctcca 43558439  T
Q  312 atttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaagttgtgtgtttttaagg 411  Q
    | ||| |||||| |  |||||| | || | |||||||||||  || ||| |||||||| | |||||||| ||||  | || ||||  |  | || |||||    
T  43558440 actttcacctctgagctagaaacactttgccttttgctaaatctacattccatatactttatcttgcttgtactccgacgaaagtcatacgcttctaagg 43558539  T
Q  412 tttatctccaacctcctat------------tcaatgctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgtt 499  Q
    ||| |||||||| ||| ||            ||||  ||||||| |||||| |||||| | |||||  |||| |||||| || |||||||||||||||||    
T  43558540 tttgtctccaacatcccattaaattcctccctcaactctccaagaaggactacatcatctacaaaacgcatatatctcggtgttagctcttggatgtgtt 43558639  T
Q  500 ctataagtacatccaaaactaaggtaaaaag 530  Q
    |  ||||||||||||||||||| || |||||    
T  43558640 ccgtaagtacatccaaaactaaagtgaaaag 43558670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 196 - 394
Target Start/End: Complemental strand, 20318763 - 20318565
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  20318763 atttcaaccacccagcttgaatatgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 20318664  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctacttaggcggaa 394  Q
     |||||||||||||||| ||| ||||| ||  ||||| || |||  |||  ||| || ||| ||| ||||||||  |||||||||||||| | ||||||    
T  20318663 tatgatatgatctccaactttcacctccaaggtagaactacttctccttccgctgaagttacattccatatactccgtcttgcttctactcaagcggaa 20318565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 25937780 - 25937662
Alignment:
Q  260 tatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacc-tctaaaatagaaataattcgtcttttgctaaaattata 358  Q
    |||||||||| ||||||||| |||||||||||| | ||||||||||||||||| ||| ||| | |||  |||||||| |||  |||||||| ||||||      
T  25937780 tatggacccaagatatttaatttgtgtaatttggggaatgatatgatctccaactttcaccttttaaggtagaaatacttctccttttgctgaaattact 25937681  T
Q  359 tttcatatactatgtcttg 377  Q
     |||||||||| |||||||    
T  25937680 cttcatatactttgtcttg 25937662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 28977638 - 28977724
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| |||||||||||    
T  28977638 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagata 28977724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 384
Target Start/End: Original strand, 6368478 - 6368623
Alignment:
Q  239 tatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaataatt 338  Q
    ||||||||| ||||||| || ||| ||  || |||||||||||||||||| |||||  ||| |||||||||||  ||| ||||||| | |||||||  ||    
T  6368478 tatttctccgtcgttttgtactatagatacaagatatttaaattgtgtaacttgtggtatgttatgatctccatctttcacctctacattagaaatgttt 6368577  T
Q  339 cgtcttttgctaaaattatatttcatatactatgtcttgcttctac 384  Q
    |  || |||||||||||| | | |||||||  ||||||||||||||    
T  6368578 cacctcttgctaaaattacaatccatataccttgtcttgcttctac 6368623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 12492897 - 12493023
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  12492897 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 12492996  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| |||||||||    
T  12492997 tatgatatgatctccaacttttacctc 12493023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 609
Target Start/End: Complemental strand, 40383941 - 40383794
Alignment:
Q  463 aaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagat-atggacttaggttgatccttgatgcaatc 561  Q
    |||| ||||||||||  |||||||||||| || |||| | ||||||||||||| ||||| |||||||||| ||||  | | ||||||| ||| ||| |||    
T  40383941 aaaagcatacatctcagtgctagctcttgaatatgttatgtaagtacatccaagactaaagtaaaaagataatggtttaatgttgatcattggtgcgatc 40383842  T
Q  562 atattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacac 609  Q
    ||| |||||  | |||||||| |||| ||  ||| ||| |||||||||    
T  40383841 ataatgttattgaaaaatcgtcggtggccctatcttgcttcctcacac 40383794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 517
Target Start/End: Complemental strand, 14099811 - 14099757
Alignment:
Q  463 aaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaa 517  Q
    |||||||||||||||| |||||||||||| |||||||  ||||||| ||||||||    
T  14099811 aaaaacatacatctcggtgctagctcttgcatgtgtttcataagtatatccaaaa 14099757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 580
Target Start/End: Original strand, 31502868 - 31502962
Alignment:
Q  487 tcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttag-gttgatccttgatgcaatcatattgttacgggaaaatc 580  Q
    |||||||| |||| | ||||||||||||||| |||||| |||||||| |||| ||| ||||| ||||| | ||||| |||||||| ||| |||||    
T  31502868 tcttggatttgttttgtaagtacatccaaaattaaggtgaaaagataaggacgtagtgttgaaccttggtacaatcctattgttaaggggaaatc 31502962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 35685491 - 35685437
Alignment:
Q  328 tagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttct 382  Q
    |||||||| | |||||||||||||||||| ||| |||||||| ||||||||||||    
T  35685491 tagaaatactacgtcttttgctaaaattacattacatatactttgtcttgcttct 35685437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 37124056 - 37123946
Alignment:
Q  461 caaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggactta-ggttgatccttgatgcaa 559  Q
    |||||| ||||  ||||||| |||||| ||| |||| |||||||| ||||||||||||||| |||| |||||| || |||| | ||||| |||| || ||    
T  37124056 caaaaagcatatgtctcgatactagctattgaatgtattctataaatacatccaaaactaaagtaagaagataagggcttatgattgattcttggtgtaa 37123957  T
Q  560 tcatattgtta 570  Q
    || ||||||||    
T  37123956 tcttattgtta 37123946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 385
Target Start/End: Complemental strand, 1275037 - 1274848
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  1275037 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 1274938  T
Q  296 aatgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
     |||||||||||||||| ||| | ||| ||  ||||  || |||  |||| ||| || ||| ||| ||||||||  ||||||||||||||    
T  1274937 tatgatatgatctccaactttcatctccaaggtagacctacttctcctttcgctgaagttacattccatatactccgtcttgcttctact 1274848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 27302496 - 27302573
Alignment:
Q  235 cttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaa 312  Q
    |||||||||||||  |||||| |||||||||| || ||||||||||  ||||| |||| |  ||||||||||||||||    
T  27302496 cttctatttctccgccgttttgtattatggacacaagatatttaaaccgtgtagtttgaggtatgatatgatctccaa 27302573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 369
Target Start/End: Original strand, 16347950 - 16348085
Alignment:
Q  234 gcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaa 333  Q
    |||| ||||||||| || |||| || ||||||| || ||||||||||  |||||| ||| |  |||||||||||||||| ||| ||||| ||  ||||      
T  16347950 gcttttatttctccgtcattttgtactatggacacaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacc 16348049  T
Q  334 taattcgtcttttgctaaaattatatttcatatact 369  Q
    || |||  |||||||| || ||| ||||||||||||    
T  16348050 tacttctccttttgctgaagttacatttcatatact 16348085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 533
Target Start/End: Complemental strand, 35685340 - 35685270
Alignment:
Q  462 aaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    ||||||||||||||| | ||||| |||||| |||||||| |||| ||| ||||||||||| | |||||||||    
T  35685340 aaaaaacatacatcttggtgctacctcttgaatgtgttccataaatac-tccaaaactaaagcaaaaagata 35685270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 2075984 - 2076110
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||  || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  2075984 atttcaaccacccaacttgaatacgatggcttacatctgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 2076083  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  2076084 tatgatatgatctccaactttcacctc 2076110  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 10639069 - 10638943
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  10639069 atttcaaccacccagcttgaatacgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 10638970  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||| ||||| ||| |||||    
T  10638969 tatgatatgatttccaactttcacctc 10638943  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 3096674 - 3096625
Alignment:
Q  468 catacatctcgatgctagctcttggatgtgttctataagtacatccaaaa 517  Q
    ||||||||| | |||| ||| ||||||||||||| |||||||||||||||    
T  3096674 catacatcttggtgctcgcttttggatgtgttctgtaagtacatccaaaa 3096625  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 21363013 - 21363102
Alignment:
Q  240 atttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaata 329  Q
    ||||||| ||||||||||| |||| | ||| |||||| ||| | ||||| ||||| ||||||||||| | || |||| |||| |||||||    
T  21363013 atttctctatcgttttatactatgaatccaagatattcaaactctgtaacttgtgtaatgatatgatgttcatttttcacctataaaata 21363102  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 437 - 533
Target Start/End: Complemental strand, 7672684 - 7672588
Alignment:
Q  437 ctccaagtaggactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||||| ||||||| || ||| || |||||||||||||||||||  |||| ||| ||| ||||  || |||| || |||||| || |||||||||||    
T  7672684 ctccaaataggactacaacatctttaaaaaacatacatctcgatattagcacttagatatgttacattagtatattcaaaacaaaagtaaaaagata 7672588  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 511
Target Start/End: Original strand, 16134841 - 16134881
Alignment:
Q  471 acatctcgatgctagctcttggatgtgttctataagtacat 511  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  16134841 acatcttgatgctcactcttggatgtgttctataagtacat 16134881  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 17341747 - 17341827
Alignment:
Q  232 ttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaa 312  Q
    ||||||||||||||| ||| |||| || ||||||||||  |||||||||   ||||||||  |  ||||||||||||||||    
T  17341747 ttgcttctatttctctatcattttctactatggacccaatatatttaaaccatgtaatttcaggtatgatatgatctccaa 17341827  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 23979903 - 23979815
Alignment:
Q  297 atgatatgatctccaatttttacctctaaaatagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttctact 385  Q
    |||||||||||||||| ||| ||||||||  | ||| || || |||||||| | || ||| ||| ||||||| ||||||||||| ||||    
T  23979903 atgatatgatctccaactttcacctctaaggttgaactactttgtcttttgttgaagttacattacatataccatgtcttgcttttact 23979815  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 24178296 - 24178180
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  |||||| |||||  ||| || ||||||||||||||| || |||| ||  | ||||||| ||| ||||||  |||||| ||  |     
T  24178296 atttcaaccacccaacttgaatatgatggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatctttaaaccgtgtaacttaggg 24178197  T
Q  296 aatgatatgatctccaa 312  Q
     ||||||||||||||||    
T  24178196 tatgatatgatctccaa 24178180  T

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Target: scaffold0018 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 652
Target Start/End: Complemental strand, 30969 - 30763
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg-tt 545  Q
    |||| |||||| | |||||| ||||||||||| ||||| |||||||||||||||  | | ||||||||||||||| ||||||||||| ||||||||| ||    
T  30969 gactacatcatctgcaaaaagcatacatctcggtgctaactcttggatgtgttccgtcaatacatccaaaactaaagtaaaaagataaggacttaggatt 30870  T
Q  546 gatccttgatgcaatcatattgttacgggaaaatcgttggtgacctcatcgtgcgtcctcacaccagttgaagcctcctagtacatgtccttgatagctc 645  Q
    || ||||| |||| || |||||||  ||||||||| | |||   | |||| ||||||||||||| ||| |||||  |||  ||||| ||||||||||| |    
T  30869 gacccttggtgcagtcctattgttttgggaaaatcttcggtagtcccatcctgcgtcctcacactagtcgaagctccctcatacatatccttgatagccc 30770  T
Q  646 gaatata 652  Q
     ||||||    
T  30769 taatata 30763  T

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Target: scaffold0286 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 470 - 586
Target Start/End: Original strand, 305 - 422
Alignment:
Q  470 tacatctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg-ttgatccttgatgcaatcatattgt 568  Q
    ||||||| | ||||| |||||||||||||||  ||||||||||||||||||| |||||||| || || |||||| |||| ||||| |||||||||||||     
T  305 tacatcttggtgctaactcttggatgtgttccgtaagtacatccaaaactaaagtaaaaaggtaagggcttaggattgacccttggtgcaatcatattga 404  T
Q  569 tacgggaaaatcgttggt 586  Q
    || || ||||||||||||    
T  405 tatggaaaaatcgttggt 422  T

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Target: scaffold0606 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 235 - 356
Target Start/End: Complemental strand, 9390 - 9269
Alignment:
Q  235 cttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaatttttacctctaaaatagaaat 334  Q
    |||| |||||| |||||||||||| |||  ||| | ||||||||||| |||||| |  | | |||||||||||||||| ||||||||||||| ||||||     
T  9390 cttccatttcttcatcgttttataatataaacctaagatatttaaatcgtgtaactaataatatgatatgatctccaacttttacctctaaactagaaac 9291  T
Q  335 aattcgtcttttgctaaaatta 356  Q
    |||||  |||||||||||||||    
T  9290 aattcaccttttgctaaaatta 9269  T

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Target: scaffold0606; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 587
Target Start/End: Complemental strand, 9131 - 9028
Alignment:
Q  485 gctcttggatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttag-gttgatccttgatgcaatcatattgttacgggaaaatcgtt 583  Q
    ||||||||||||||| | |||||||||||||||||||  | ||||||||  |  |||| ||||  ||||| ||||||| |||||||| |||||||||||     
T  9131 gctcttggatgtgttttgtaagtacatccaaaactaaaatgaaaagataatggtttagtgttgtaccttggtgcaatcctattgttatgggaaaatcgtc 9032  T
Q  584 ggtg 587  Q
    ||||    
T  9031 ggtg 9028  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 82489 - 82377
Alignment:
Q  200 caaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatg 299  Q
    ||||||||||  ||||||  ||||| ||| || ||||||||||||||| || |||| || |||||||||| ||||||||||  |||||| |||||  |||    
T  82489 caaccacccagcttgaatacgatgatttacatctgcttctatttctccgtcattttttactatggacccaagatatttaaaccgtgtaacttgtggtatg 82390  T
Q  300 atatgatctccaa 312  Q
    |||| ||||||||    
T  82389 atataatctccaa 82377  T

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Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 492 - 586
Target Start/End: Original strand, 88760 - 88855
Alignment:
Q  492 gatgtgttctataagtacatccaaaactaaggtaaaaagatatggacttagg-ttgatccttgatgcaatcatattgttacgggaaaatcgttggt 586  Q
    |||||||||  | ||||||||||||| ||| |||||||| || ||||||||| |||| ||||| ||||||| ||| |||||||||||||| |||||    
T  88760 gatgtgttcctttagtacatccaaaagtaatgtaaaaagttaaggacttagggttgacccttggtgcaatcctatggttacgggaaaatctttggt 88855  T

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Target: scaffold0570 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 2780 - 2906
Alignment:
Q  196 atttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtga 295  Q
    ||||||||||||||  ||||||  ||||| ||| || ||||||||||||| | || |||| ||  | ||||||| ||||||||||  |||||| ||| |     
T  2780 atttcaaccacccagcttgaatacgatgacttacatctgcttctatttcttcgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgggg 2879  T
Q  296 aatgatatgatctccaatttttacctc 322  Q
     |||||||||||||||| ||| |||||    
T  2880 tatgatatgatctccaactttcacctc 2906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 516
Target Start/End: Original strand, 12373 - 12442
Alignment:
Q  447 gactgcatcattttcaaaaaacatacatctcgatgctagctcttggatgtgttctataagtacatccaaa 516  Q
    |||| |||||| |||||||| ||||||||||| ||||| |||||| ||||||||| | | ||||||||||    
T  12373 gactacatcatcttcaaaaagcatacatctcggtgctaactcttgaatgtgttctgtcaatacatccaaa 12442  T

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Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 12145 - 12224
Alignment:
Q  233 tgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatatgatctccaa 312  Q
    ||||||||||||||| || |||| || |||||||||| ||||||||||   ||||| ||| |  ||||||||||||||||    
T  12145 tgcttctatttctccgtcattttgtactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaa 12224  T

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Target: scaffold0220 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 533
Target Start/End: Original strand, 25020 - 25080
Alignment:
Q  473 atctcgatgctagctcttggatgtgttctataagtacatccaaaactaaggtaaaaagata 533  Q
    |||||| ||||| ||||| ||||||||| ||||| |||| ||||||||| |||||||||||    
T  25020 atctcggtgctaactcttagatgtgttccataagaacattcaaaactaaagtaaaaagata 25080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 383
Target Start/End: Original strand, 24863 - 24918
Alignment:
Q  328 tagaaataattcgtcttttgctaaaattatatttcatatactatgtcttgcttcta 383  Q
    ||||| || |||||||||| ||||| ||| |||||||||||| |||||||||||||    
T  24863 tagaactacttcgtcttttactaaagttacatttcatatactctgtcttgcttcta 24918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 4286 - 4386
Alignment:
Q  193 ttaatttcaaccacccatattgaatttgatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttg 292  Q
    ||||||||||||| |||  |||||| | |||  ||| |||| |||| |||| ||||||||||| || ||| |||| | |||||||||||| ||||| |||    
T  4286 ttaatttcaaccatccagcttgaatcttatggtttagattttcttcaatttatccatcgttttgtactatagacctaagatatttaaattttgtaacttg 4385  T
Q  293 t 293  Q
    |    
T  4386 t 4386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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