View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: P12_low_15 (Length: 237)
Name: P12_low_15
Description: P12
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] P12_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 9646753 - 9646930
Alignment:
| Q |
35 |
aatatgaacaaggcagatccacaagaggaaatagtagtcaacaagaaaactaataaag-ccctagaatggagtttgtccatagaagagattacaggaagg |
133 |
Q |
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| T |
9646753 |
aatatgaacaaggcagatccacaagaggaaatagtagtcaacaagaaaactaataaagtccctagaatggagtttgtccatagaagagattgcaggaagg |
9646852 |
T |
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| Q |
134 |
aataagggaagaacattgagaaccttatcatagttgaaaaagtagcaaataagatagattcacttactaagaaggacaagt |
214 |
Q |
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| T |
9646853 |
aataagggaagaacattgagaacctt---atagttgaaaaagttgcagataagatagattcacttgctaagaaggacaagt |
9646930 |
T |
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