View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: SO5574B-LTR4-TNT-insertion-9 (Length: 457)
Name: SO5574B-LTR4-TNT-insertion-9
Description: SO5574B-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] SO5574B-LTR4-TNT-insertion-9 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 415; Significance: 0; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 8 - 429
Target Start/End: Complemental strand, 4678553 - 4678131
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678553 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
4678454 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678453 |
ttgattatttgaatgacattaagtccagcaatggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
4678354 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678353 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
4678254 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678253 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
4678154 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctgc |
429 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
4678153 |
ccaattaacctcttagcatctgc |
4678131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 428
Target Start/End: Original strand, 15595329 - 15595631
Alignment:
| Q |
123 |
acattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaag |
221 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||| || |||||||||||||||||||||| || |||||||| |||||||| |||| || || | || |
|
|
| T |
15595329 |
acattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagcaggcacggtaacaactgcattgtttacgggagac- |
15595427 |
T |
|
| Q |
222 |
ttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaat |
321 |
Q |
| |
|
|| | || | || ||||| |||| ||||||| | || ||||| || |||||||||||| ||| || |||| |||||||||||||| |||||| |||| |
|
|
| T |
15595428 |
-taaaaatttctctgcaacctctcgcatctttttgagaatcatagacgatatttcctcagcacaaaagcgcttttcttgacccttgtatttaacaataat |
15595526 |
T |
|
| Q |
322 |
catcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaac-aacagaatcactatacctcctaccaattaacctctt |
420 |
Q |
| |
|
||| ||||| |||||| ||||| |||||| | |||||||||||| | || || |||||||| ||||||||||||| || |||||| ||||| ||||| |
|
|
| T |
15595527 |
catgggtttgtcattcacacca---atgaccttgaatggccacaactttatatcattttgaacaaacagaatcactaaacttcctactgattaatctctt |
15595623 |
T |
|
| Q |
421 |
agcatctg |
428 |
Q |
| |
|
|||||||| |
|
|
| T |
15595624 |
agcatctg |
15595631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 34466731 - 34466603
Alignment:
| Q |
65 |
tctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagctttt |
163 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||| ||||| ||||||||||| | |||||||| ||||| || | ||||||||| | ||||||||| |
|
|
| T |
34466731 |
tctcttgtcaagtccatatgcaatagctgcagcagtgggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatccacagtagctttt |
34466632 |
T |
|
| Q |
164 |
cgttgagaatcattgaagtatgcaggcac |
192 |
Q |
| |
|
|| ||||||||||| || || |||||||| |
|
|
| T |
34466631 |
cgctgagaatcattaaaataagcaggcac |
34466603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 428
Target Start/End: Complemental strand, 34466548 - 34466367
Alignment:
| Q |
247 |
catctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcaccagtg |
346 |
Q |
| |
|
|||||||| ||||||||| ||||| ||||||||| ||| | |||||||| |||||||| ||||||| |||||| || || ||||| |||||| |
|
|
| T |
34466548 |
catctttgaaaggatcatagatgagatttcctcagcacataggtgcttctcctgacccttatacttaagggaaatcattggcttgtcattaacaccagca |
34466449 |
T |
|
| Q |
347 |
atgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
|| || | |||||||| ||||| || ||| |||||||| ||| ||||||| | | || |||||||||||||||||||||| |
|
|
| T |
34466448 |
ataactttgaatggccataacatcatatctgtttgaacatcaggatcactaaattttctgccaattaacctcttagcatctg |
34466367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 424
Target Start/End: Complemental strand, 52549143 - 52549098
Alignment:
| Q |
379 |
ttgaacaacagaatcactatacctcctaccaattaacctcttagca |
424 |
Q |
| |
|
||||||||||| ||||||| || || |||||||||||||||||||| |
|
|
| T |
52549143 |
ttgaacaacaggatcactaaacttcttaccaattaacctcttagca |
52549098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 8 - 428
Target Start/End: Original strand, 8659536 - 8659957
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||||||||||||||| |||||||| || |||||| |||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8659536 |
aaaagtaccaccaccaagatcaaagaccaaaatattttgtttaccatcacagtcacctctcttgtcaaaaccatatgcaatagctgcagcagtaggttca |
8659635 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|| ||||| |||||||||||||| |||||| ||||||| | ||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| |
|
|
| T |
8659636 |
ttaattatctgaatgacattaaggccagcaatggcaccggaatctatggtggcttttcgctgagaatcattgaactatgcaggcactgtaacaacagcat |
8659735 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
||||||||| || |||||||||| || |||||||||| ||| |||||||| | ||| |||||||||||||| ||| || |||||||| |||||||| |
|
|
| T |
8659736 |
tcttcacaggtgacattagatatgtctctgcaacttctcgcatttttgtaagtaccatagatgatatttcctccgcacaaaagtgcttctcctgaccctt |
8659835 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
||||| |||| ||||||| |||| || ||| |||||| ||| ||| | |||||||||||||| ||||||||||||||||| ||||||||| || ||||| |
|
|
| T |
8659836 |
gtactgaacattaatcatgagtttgtcgttcacaccagcgataaccttgaatggccacaacatcatgtctttttgaacaactgaatcactaaacttccta |
8659935 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||||||| ||||| ||||||| |
|
|
| T |
8659936 |
ccaattaatctctttgcatctg |
8659957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 8 - 428
Target Start/End: Original strand, 1301633 - 1302058
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacag----tagg |
103 |
Q |
| |
|
|||||||||||| |||||||||||||| || ||||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
1301633 |
aaaagtaccaccgccaaggtcaaagaccaaaatattccgtttaccatcacagtcacttctcttgtcaaaaccatacgcaatagctgcagcagtagctagg |
1301732 |
T |
|
| Q |
104 |
ttcgttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacg |
202 |
Q |
| |
|
||| || ||||| |||||||||||||| ||||| || ||||| ||||||||||| |||||||| |||||||||||||| | |||||||||||||||||| |
|
|
| T |
1301733 |
ttcattaattatctgaatgacattaaggccagcaattgcaccggcatctatggtggcttttcgctgagaatcattgaaatgtgcaggcacagtaacaaca |
1301832 |
T |
|
| Q |
203 |
acattcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgac |
302 |
Q |
| |
|
|||| |||| | || |||||||||| || |||| ||||| |||||| ||||||| ||| |||||||||||||| || | || |||||||| |||| |
|
|
| T |
1301833 |
gcatttgtcactggtgacattagatatgtctctgcaatttctcgcatcttcgtaaggaccatagatgatatttcctccacgcaaaagtgcttctcctgac |
1301932 |
T |
|
| Q |
303 |
ccttgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacct |
402 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||||| |||| | ||||||| | |||||||||||||| ||||||||||||||||| ||||||||| || | |
|
|
| T |
1301933 |
ccttgtacttaacaacaatcacgggtttgtcattcacaccggcgatgaccttgaatggccacaacatcatgtctttttgaacaactgaatcactaaactt |
1302032 |
T |
|
| Q |
403 |
cctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||||||||||| ||||||||||||| |
|
|
| T |
1302033 |
cctaccaattaatctcttagcatctg |
1302058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 8 - 429
Target Start/End: Original strand, 8667592 - 8668014
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| || ||||| || ||||||||||| |||||||| ||| ||||| ||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
8667592 |
aaaagtcccgccacccagatcaaagacaaaaatatttcggctaccatcacagtcatttctcttgtcaaggccatatgcaatagctgccgcagtaggttca |
8667691 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||||||| |||||||||||||||||||| | | ||||||||||||||| || ||||| ||||||||||||||||| || ||||||||||||||| ||| |
|
|
| T |
8667692 |
ttgattatccgaatgacattaagtccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctggcacagtaacaacggcat |
8667791 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||| || | ||| ||||||| || ||||| |||| |||||||||||| | ||| || |||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
8667792 |
tcttgaccggcgaccccagatatgcctccgcaacctctcgcatctttgtaagcaccatagaagatatttcctcagcacaaaagtgcttctcttgaccctt |
8667891 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
|||||||||| ||||||| ||||| ||||| |||||| || ||| | ||||||||||||| || ||| |||||||||| | |||||| || ||||| |
|
|
| T |
8667892 |
gtacttaacagtaatcataggtttgtcattaacaccagaaataaccttgaatggccacaacaatatatctctttgaacaacggggtcactaaacttccta |
8667991 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctgc |
429 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
8667992 |
ccaattaacctcttagcatctgc |
8668014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 8 - 427
Target Start/End: Original strand, 8654623 - 8655043
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||||||||||||||| ||||| || || ||||| ||||||| |||| | ||||| |||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
8654623 |
aaaagtaccaccaccaagatcaaataccaaaatattccgtttaccatcatagttacttcgcttgtcaaggccatatgcaatagctgcggcagtaggttca |
8654722 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||| ||| ||||||| |||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
8654723 |
ttgagtatccgaatgacgttaagtccagcaatggcaccagcatctatggttgcttttcgctgagagtcattgaagtatgccggcacagtaacaacgacat |
8654822 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
| || || | || || |||| || |||| |||| |||||||||||| | | ||||||||||||||| ||| || ||||||||||||||| || |
|
|
| T |
8654823 |
ttttgacgggtgatccaaggtatgcctctgcaatctctcgcatctttgtaagaaccgcagatgatatttcctcagcacaaaattgcttctcttgaccttt |
8654922 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
|||||||||| ||||||| ||||| ||||| |||||| | ||| | ||||||||||||||||| || |||||||||| || |||||||||| ||||| |
|
|
| T |
8654923 |
gtacttaacagtaatcatgggtttgtcattaacaccagaagtaaccatgaatggccacaacatgatatccttttgaacaataggatcactatacttccta |
8655022 |
T |
|
| Q |
407 |
ccaattaacctcttagcatct |
427 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
8655023 |
ccaattaacctcttagcatct |
8655043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 8 - 428
Target Start/End: Complemental strand, 13333451 - 13333030
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
||||||||||||||| || ||||||||||| |||||||| |||| ||||| |||| ||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
13333451 |
aaaagtaccaccacccagatcaaagacaaaaatatttcgcttaccatcacaatcacgtctcttgtcaaggccatatgcaatagctgcagcagtaggttca |
13333352 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
||||||||| |||||| |||||| ||||| || ||||||||||||||||| || ||||| ||||||||||||||||| || ||||||||||||||| ||| |
|
|
| T |
13333351 |
ttgattattcgaatgatattaaggccagcaatagcaccagcatctatggtggcctttcgctgagaatcattgaagtaagccggcacagtaacaacggcat |
13333252 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||| || | || | ||||| || ||||| |||| |||||||||||||| ||| |||||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
13333251 |
tcttgactggtgaccccatatatgcctctgcaacctctcgcatctttgtaaggaccatagatgatatttcctcggcacaaaagtgcttctcttgaccctt |
13333152 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
| ||||| | ||||||| || || || || |||||| | ||| | |||||||||||||| || || ||||||||||| | ||||||| || ||||| |
|
|
| T |
13333151 |
gcacttagcggtaatcataggcttgtcgttgacaccagaagtaaccttgaatggccacaacattatatcattttgaacaaccggatcactaaacttccta |
13333052 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
13333051 |
ccaattaacctcttagcatctg |
13333030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 8 - 427
Target Start/End: Complemental strand, 10494369 - 10493949
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
||||||||||||||| || ||||||||||| |||||||| |||| |||| |||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
10494369 |
aaaagtaccaccacccagatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttca |
10494270 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||||||| ||||||||||||| ||||| || ||||||||||| || ||||| |||||||||||||| |||||||| || |||||||||||||| ||| |
|
|
| T |
10494269 |
ttgattatccgaatgacattaaggccagcaatagcaccagcatcaatagtagcctttcgttgagaatcgttgaagtaagccggcacagtaacaacagcat |
10494170 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||| || | || | ||||| || ||||| |||| ||||||| |||||| ||| |||||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
10494169 |
tcttgactggtgaccccaaatatgcctctgcaacctctcgcatctttataaggaccatagatgatatttcctcggcacaaaagtgcttctcttgaccctt |
10494070 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
||||||| | ||||||| ||||| ||||| |||| | | ||| | |||||||||||||| || || ||||||||||| | ||||||| || |||| |
|
|
| T |
10494069 |
gtacttagcggtaatcataggtttgtcattgacacctgaagtaaccttgaatggccacaacattatatcgttttgaacaaccggatcactaaacttcctg |
10493970 |
T |
|
| Q |
407 |
ccaattaacctcttagcatct |
427 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10493969 |
ccaattaacctcttagcatct |
10493949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 428
Target Start/End: Complemental strand, 8585701 - 8585280
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||| |||||||||| || ||||| | || | | ||||||| |||||||||||||||||| |||| ||||| |
|
|
| T |
8585701 |
aaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacagttacctttgttgtcaaggccatatgcaatagctgcagcagtgggttca |
8585602 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||||||| || |||||||| |||||| ||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||||| ||||| ||| |
|
|
| T |
8585601 |
ttgattatcctcataacattaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcattgaaataagcaggcacagtcacaactgcat |
8585502 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaa-cttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccct |
305 |
Q |
| |
|
| | |||| || | | |||||| || |||| ||||| |||| ||||| ||||| || ||||||||||||||| ||| | | ||| |||||||||| |
|
|
| T |
8585501 |
tttgaacaggtgatttcaaatatgtctctgcaatcttct-tcatgtttgtgaggatgatagatgatatttcctcagcacataggttcttttcttgaccct |
8585403 |
T |
|
| Q |
306 |
tgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcct |
405 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||| |||||| ||| ||| | |||||||||||||| || || ||||||||||| | ||||||| || |||| |
|
|
| T |
8585402 |
tgtacttaacagtaatcataggtttgtcattaacaccagagataaccttgaatggccacaacattatatcattttgaacaacgggatcactaaacttcct |
8585303 |
T |
|
| Q |
406 |
accaattaacctcttagcatctg |
428 |
Q |
| |
|
||||||||||||||| ||||||| |
|
|
| T |
8585302 |
accaattaacctcttggcatctg |
8585280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 27 - 415
Target Start/End: Complemental strand, 8671606 - 8671217
Alignment:
| Q |
27 |
tcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacat |
126 |
Q |
| |
|
||||||||||| |||||||| |||| |||| ||| |||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||| |
|
|
| T |
8671606 |
tcaaagacaaaaatatttcggttaccttcacggtcatttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacat |
8671507 |
T |
|
| Q |
127 |
taagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttag |
225 |
Q |
| |
|
|||||||||| || | ||||||||| ||||| || |||| ||||||||||||||||| || ||||| ||||||||| ||||||| || | || || |
|
|
| T |
8671506 |
taagtccagcaatagtaccagcatcaatggtggccgttcgctgagaatcattgaagtaagctggcacggtaacaacggcattcttgaccggtgactccag |
8671407 |
T |
|
| Q |
226 |
atatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatc |
325 |
Q |
| |
|
||||| || ||||| |||| |||||||||||| | ||| || |||||||||||| ||| || |||||||||| |||| | |||||| ||| ||||||| |
|
|
| T |
8671406 |
atatgcctccgcaacctctcgcatctttgtaagcaccatagaagatatttcctcagcacaaaattgcttctctagaccttcgtacttgacagtaatcata |
8671307 |
T |
|
| Q |
326 |
ggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaac |
415 |
Q |
| |
|
||||| ||||| |||||| || ||| | ||||||||||||| || ||| |||||||||| | ||||||| || |||||||||||||| |
|
|
| T |
8671306 |
ggtttgtcattaacaccagaaataaccttgaatggccacaacaatatatctctttgaacaaccggatcactaaacttcctaccaattaac |
8671217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 64 - 428
Target Start/End: Original strand, 8647106 - 8647468
Alignment:
| Q |
64 |
ttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttt |
162 |
Q |
| |
|
|||||||||||| |||||||| | ||| ||| | || ||||| |||||||| | |||| |||||| |||||| |||| || |||||||| || ||||| |
|
|
| T |
8647106 |
ttctcttgtcaaggccatatgcgagagcagcagctgttggttcattgattatccggatgatattaaggccagcaatggccccggcatctatagtggcttt |
8647205 |
T |
|
| Q |
163 |
tcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatc |
262 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||| ||||||| |||| || ||| |||| | || ||||| |||| ||||||||| |||||| |
|
|
| T |
8647206 |
tcgctgataatcattgaagtatgcaggcacagtaacaactgcattctttacaggggacattaaatatttctctgcaacctctcgcatctttgtgaggatc |
8647305 |
T |
|
| Q |
263 |
atcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggcc |
362 |
Q |
| |
|
|||||||||||||||||| ||| | ||||||||| ||||||||| |||||| ||||||| ||||| |||||| | ||| |||||| | ||||||| |
|
|
| T |
8647306 |
atcgatgatatttcctcagcacaataacgcttctcttcacccttgtatttaacaataatcatgggtttgtcattcacccca---atgaccttgaatggcc |
8647402 |
T |
|
| Q |
363 |
acaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
||||| | | || || ||||||||||||||| | || ||||||| ||||||||||||||||||| |
|
|
| T |
8647403 |
acaacttcttatcattctgaacaacagaatcaaaaaacttcctaccgattaacctcttagcatctg |
8647468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 428
Target Start/End: Original strand, 8628705 - 8629126
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||| |||||||||| || ||||| || | | ||||||| |||||||||||||||||| |||| || || |
|
|
| T |
8628705 |
aaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacacctacctttgttgtcaaggccatatgcaatagctgcagcagtggggtca |
8628804 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||||||| || |||||||| |||||| |||||||||||| ||||| |||||||| |||||||||||||| || |||||||| || ||||| ||| |
|
|
| T |
8628805 |
ttgattatcctcataacattaaggccagcaatggcaccagcattcatggtggcttttcgctgagaatcattgaaataagcaggcacggtgacaactgcat |
8628904 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaa-cttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccct |
305 |
Q |
| |
|
| || |||| || | | ||| | || |||| ||||| |||| |||| |||||| || ||||||||||||||| ||| | | |||||||||||||| |
|
|
| T |
8628905 |
tttttacaggtgatttcaaataagcctctgcaatcttct-tcatatttgcaaggataatagatgatatttcctcagcacataggttcttctcttgaccct |
8629003 |
T |
|
| Q |
306 |
tgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcct |
405 |
Q |
| |
|
||||||||||| |||||| || || ||||| ||||| || ||| | |||||||| |||||||| || ||||||||||||| ||||||| || |||| |
|
|
| T |
8629004 |
tgtacttaacagcaatcataggcttgtcattaagaccagaaataaccttgaatggccagaacatgatatccttttgaacaacaggatcactaaacttcct |
8629103 |
T |
|
| Q |
406 |
accaattaacctcttagcatctg |
428 |
Q |
| |
|
||||||||||||||| ||||||| |
|
|
| T |
8629104 |
accaattaacctcttggcatctg |
8629126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 428
Target Start/End: Original strand, 6789741 - 6790106
Alignment:
| Q |
64 |
ttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttt |
162 |
Q |
| |
|
||||||| |||| |||||||||| ||| ||| | || ||||| ||||||||| | || |||||||| |||||| ||||||||||||||| || ||||| |
|
|
| T |
6789741 |
ttctcttatcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtggcttt |
6789840 |
T |
|
| Q |
163 |
tcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatc |
262 |
Q |
| |
|
||||||||||||||||| || ||||||||||||| ||| |||| || | || | |||| | || |||| || | |||||| || |||||| |
|
|
| T |
6789841 |
ccgttgagaatcattgaaataagcaggcacagtaataactgcattttttatctctgactgcaaatatttctcagcaatctcccgcatcttggtgaggatc |
6789940 |
T |
|
| Q |
263 |
atcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggcc |
362 |
Q |
| |
|
|| || || | ||||||||||| | ||||||||| | |||||| |||| |||| |||||| || || ||||| | |||| |||||| | ||||||| |
|
|
| T |
6789941 |
atagacgaaacttcctcaacacatagttgcttctcctcacccttatactcaacaacaatcatgggcttgtcattgacgccagcaatgaccttgaatggcc |
6790040 |
T |
|
| Q |
363 |
acaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
| ||||| || || ||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
6790041 |
aaaacatcatatcattttgaacaacagaatcactaaacttcctaccaattaacctcttagcatctg |
6790106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 417
Target Start/End: Complemental strand, 8640425 - 8640133
Alignment:
| Q |
125 |
attaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaag-t |
222 |
Q |
| |
|
|||||| |||||| |||| || ||||||||||| |||||| | ||| ||||||||||||| ||||||| ||||||||| ||||||| || | | | | |
|
|
| T |
8640425 |
attaaggccagcaatggccccggcatctatggtggctttttgctgataatcattgaagtaagcaggcatagtaacaactgcattctttacggggggacat |
8640326 |
T |
|
| Q |
223 |
tagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatc |
322 |
Q |
| |
|
|| |||| | || ||||| |||| |||||| | ||||||||| |||||||||||||| ||| || ||||||||| ||||||||| |||||| ||||| |
|
|
| T |
8640325 |
taaatatttctctgcaacctctcgcatcttcgaaaggatcatagatgatatttcctcggcacaaaaacgcttctcttcacccttgtatttaacaataatc |
8640226 |
T |
|
| Q |
323 |
atcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacc-tcctaccaattaacct |
417 |
Q |
| |
|
| ||||| |||||| | ||| |||||| | |||||||||||| | || || ||||||||||||||| || | ||| |||||||||||||||| |
|
|
| T |
8640225 |
gtgggtttgtcattcacccca---atgaccttgaatggccacaacttcatatcattttgaacaacagaaacaaaaaaccttcctaccaattaacct |
8640133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 17268112 - 17268302
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtt-tacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttc |
106 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||| |||| | ||| ||| | | |||||||| ||| |||||||||||||||||| |||| ||||| |
|
|
| T |
17268112 |
aaaagtcccaccaccaaggtcaaagacaaaaatattccgttcttcaa-cacagttagttctcttgccaaggccatatgcaatagctgcagcagttggttc |
17268210 |
T |
|
| Q |
107 |
gttgattat-ttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaa |
197 |
Q |
| |
|
||||||| || ||| |||||||| |||||| || |||||||||||||||| |||||||| |||||||| |||||||| || || ||||||| |
|
|
| T |
17268211 |
attgattaccttcaat-acattaaggccagcaatgacaccagcatctatggtggcttttcgctgagaatcgttgaagtaagccgggacagtaa |
17268302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 290 - 427
Target Start/End: Original strand, 3147728 - 3147865
Alignment:
| Q |
290 |
tgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacag |
389 |
Q |
| |
|
|||||||| || |||||| ||||||| |||||| ||||| |||||| | || |||||| | |||||||||||||| || || ||||||||||||| |
|
|
| T |
3147728 |
tgcttctcctgtcccttgcacttaaccgaaatcatgggtttgtcattcactccgcaaatgaccttgaatggccacaacatcatatcattttgaacaacag |
3147827 |
T |
|
| Q |
390 |
aatcactatacctcctaccaattaacctcttagcatct |
427 |
Q |
| |
|
|||||| | || ||||||||||||||||||| |||||| |
|
|
| T |
3147828 |
aatcaccaaacttcctaccaattaacctctttgcatct |
3147865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 17260414 - 17260614
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||||| ||| || ||| | | |||||||| ||| |||||||||||||||||| || ||||||| |
|
|
| T |
17260414 |
aaaagtccccccaccaaggtcaaagacaaaaatattccgtacttaaacacaattagttctcttgacaaggccatatgcaatagctgcagcaataggttca |
17260513 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|| |||| | | |||| ||| |||||| | |||||||||||||||| |||||||| |||||||||||||| || ||||| ||||||| ||| |||| |
|
|
| T |
17260514 |
ttaattaacttcaaaacataaaggccagcaataacaccagcatctatggtggcttttcgctgagaatcattgaaataagcaggaacagtaataacaacat |
17260613 |
T |
|
| Q |
207 |
t |
207 |
Q |
| |
|
| |
|
|
| T |
17260614 |
t |
17260614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 78 - 280
Target Start/End: Complemental strand, 8636268 - 8636065
Alignment:
| Q |
78 |
ccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcat |
176 |
Q |
| |
|
||||| |||| ||||||| |||| ||||| |||||||| |||| |||||||| || ||| |||||||||||||| |||| | ||| || |||||||||| |
|
|
| T |
8636268 |
ccatacgcaaaagctgcagcagttggttcattgattatccgaattacattaaggccggcaatggcaccagcatctttggtggatttacgctgagaatcat |
8636169 |
T |
|
| Q |
177 |
tgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttc |
276 |
Q |
| |
|
|||| || || |||||||||| || ||||||| ||||| || ||||||| || |||| |||| ||||||||| |||| ||| || |||||||| |
|
|
| T |
8636168 |
tgaaataagcgggcacagtaatgactgcattcttgacagatgattccagatatgcctcagcaatctctcgcatctttgtcaggaccatagacgatatttc |
8636069 |
T |
|
| Q |
277 |
ctca |
280 |
Q |
| |
|
|||| |
|
|
| T |
8636068 |
ctca |
8636065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 8382738 - 8382669
Alignment:
| Q |
140 |
gcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattct |
209 |
Q |
| |
|
|||||||||||| | || ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
8382738 |
gcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcacggtaacaactacattct |
8382669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 3147501 - 3147653
Alignment:
| Q |
64 |
ttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttt |
162 |
Q |
| |
|
|||||||||| | ||||| |||||||||||| |||||||||| |||||||| | || | |||||| ||||| || ||||||||||||| || ||||| |
|
|
| T |
3147501 |
ttctcttgtccagtccatacgcaatagctgcagcagtaggttcattgattatccgcataatattaaggccagcaataacaccagcatctattgtcgcttt |
3147600 |
T |
|
| Q |
163 |
tcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacag |
215 |
Q |
| |
|
|| |||| ||||||||| || ||||| || |||||||| ||||||| |||| |
|
|
| T |
3147601 |
ccgctgagcatcattgaaataagcaggtacggtaacaactgcattcttgacag |
3147653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 7877595 - 7877520
Alignment:
| Q |
140 |
gcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacag |
215 |
Q |
| |
|
|||||||||||| | || ||||||||||||||||||||||| || || |||||||||||||| ||||||| |||| |
|
|
| T |
7877595 |
gcaccagcatcttttgtggcttttcgttgagaatcattgaaataagccggcacagtaacaactgcattcttgacag |
7877520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 428
Target Start/End: Original strand, 8602277 - 8602568
Alignment:
| Q |
137 |
atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttagatatgtttcgg |
236 |
Q |
| |
|
||||||||||||||| | || |||||||| ||||||||||| || || || |||||||||||||| ||||||| |||| || ||| | | || | |
|
|
| T |
8602277 |
atggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggcacagtaacaactgcattcttgacaggtgactccagaaacttctctg |
8602376 |
T |
|
| Q |
237 |
caacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcatt |
336 |
Q |
| |
|
||| ||| | |||||||||||||| ||| ||||| ||||||||| ||| | ||||| || |||||| ||||||||| | ||| ||||| |||| |
|
|
| T |
8602377 |
caatttcacgcatctttgtaaggaccattgatgagatttcctcagcacagaagtgcttttccccacccttatacttaacaatgatctcaggtttgtcatc |
8602476 |
T |
|
| Q |
337 |
ctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
| |||| | ||| |||||||||||||| ||||| || |||| |||||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
8602477 |
attgccaggaacaaccttaaatggccacaaccgtatgtcattctgaatgacagaatcactatatttccttccaattaacctctttgcatctg |
8602568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 27830800 - 27830697
Alignment:
| Q |
78 |
ccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcat |
176 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| | ||||| | || |||||||| ||||| |||||||| | ||||| || |||||||||||||| |||| |
|
|
| T |
27830800 |
ccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagagtcat |
27830701 |
T |
|
| Q |
177 |
tgaa |
180 |
Q |
| |
|
|||| |
|
|
| T |
27830700 |
tgaa |
27830697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 8582225 - 8582294
Alignment:
| Q |
359 |
ggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
||||||||| |||| || |||||||||| ||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
8582225 |
ggccacaacttgatatccttttgaacaatggaatcactatatttccttccaattaacctctttgcatctg |
8582294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 428
Target Start/End: Original strand, 17268452 - 17268533
Alignment:
| Q |
347 |
atgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||||| | ||||||||| |||| || |||||||| || |||| ||||||| || |||||||||||| ||||||||||||| |
|
|
| T |
17268452 |
atgaccttgaatggccacgacattatatctttttggaccacaggatcactaaacttcctaccaattagtctcttagcatctg |
17268533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 427
Target Start/End: Complemental strand, 27830635 - 27830450
Alignment:
| Q |
242 |
tctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcac |
341 |
Q |
| |
|
|||| |||||||||||||| ||| ||||| |||||||| ||| | || ||||| |||| ||||||||||||| || ||| ||||| | || || |
|
|
| T |
27830635 |
tctcgcatctttgtaaggaccattgatgaaatttcctccgcacataagtgtttctcctgactcttgtacttaacaacaaacatgggtttgttgtttacat |
27830536 |
T |
|
| Q |
342 |
cagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatct |
427 |
Q |
| |
|
|||| ||||| | ||| ||||||| | || ||||||||||||||| ||| || || |||||||||||||||||||||||||| |
|
|
| T |
27830535 |
cagtaatgactttgaatagccacaagtttatatctttttgaacaacatcatcgctgaacttcctaccaattaacctcttagcatct |
27830450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 8590945 - 8591019
Alignment:
| Q |
141 |
caccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacag |
215 |
Q |
| |
|
||||||||||| |||||||||| | ||||||||||| || || || |||||||||||||| ||||||| |||| |
|
|
| T |
8590945 |
caccagcatctttggtagctttcctctgagaatcattaaaataagctggcacagtaacaactgcattcttgacag |
8591019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 29581700 - 29581646
Alignment:
| Q |
143 |
ccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaa |
197 |
Q |
| |
|
||||||||| |||| |||||||| |||||||||||||| || |||||||| |||| |
|
|
| T |
29581700 |
ccagcatctttggtggcttttcgctgagaatcattgaaataagcaggcacggtaa |
29581646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 428
Target Start/End: Original strand, 17260754 - 17260835
Alignment:
| Q |
347 |
atgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||||| | ||||||||| |||| || |||||||| || |||| ||||||| || ||||||||| || ||||||||||||| |
|
|
| T |
17260754 |
atgaccttgaatggccacgacattatatctttttggaccacaggatcactaaacttcctaccaactagtctcttagcatctg |
17260835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 7877488 - 7877456
Alignment:
| Q |
247 |
catctttgtaaggatcatcgatgatatttcctc |
279 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
7877488 |
catctttgtaaggatcatggatgatatttcctc |
7877456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 182; Significance: 3e-98; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 8 - 428
Target Start/End: Complemental strand, 16657512 - 16657091
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
16657512 |
aaaagtaccaccgccaaggtcaaagacaaaaatattccgtttaccatcacaatcacttctcttgtcaagaccatatgcaatagctgcagcagtaggttca |
16657413 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
||||| ||| ||||||||||||| ||||| |||||||||||||||||||| |||||||| || |||||||||||||| || |||||||||||||| ||| |
|
|
| T |
16657412 |
ttgataattcgaatgacattaaggccagcgatggcaccagcatctatggtggcttttcgctgcgaatcattgaagtaagctggcacagtaacaacagcat |
16657313 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||| |||| ||| | | ||| || |||||||||| |||||||||||||||||| ||||||||||||||| ||| || ||| ||||||||||||| |
|
|
| T |
16657312 |
tcttgacaggcgactccataaatgcctcagcaacttctcgcatctttgtaaggatcatagatgatatttcctcagcacaaaattggctctcttgaccctt |
16657213 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
|||| || | ||||||| ||||| |||||| | || | |||||| | ||||||||||| ||||| || ||||||||||||| ||||||| || ||||| |
|
|
| T |
16657212 |
atactgaagagtaatcattggtttgtcattcactccggcaatgaccttgaatggccacaagatgatatcattttgaacaacaggatcactaaacttccta |
16657113 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctg |
428 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
16657112 |
ccgattaaccttttagcatctg |
16657091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 428
Target Start/End: Original strand, 43625585 - 43626004
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||| | | ||| | | ||||||||| || || ||||| | ||| ||| | || ||||| |
|
|
| T |
43625585 |
aaaagtaccaccaccaaggtcaaagatgaaaatatttcgttctccaacacaattaattctcttgttaaggccgtatgctagagcagcagctgttggttca |
43625684 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
||||||| | | | |||||||| || || || ||||| |||||||||| |||||||| ||||||||||||||||| |||||||| |||||||| ||| |
|
|
| T |
43625685 |
ttgattactcgtaaaacattaaggccgacaatgacaccaacatctatggtggcttttcgctgagaatcattgaagtaagcaggcacggtaacaactgcat |
43625784 |
T |
|
| Q |
207 |
tcttcacagacgaag-ttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccct |
305 |
Q |
| |
|
|||| || | | | ||| | || | || ||||| |||| ||||||||| |||||||| || |||||||||||| || || ||||||||||||||| |
|
|
| T |
43625785 |
tctttacggggggacattaaaaatttctctgcaacctctcgcatctttgtgaggatcatagacgatatttcctcaggacaaaaacgcttctcttgaccct |
43625884 |
T |
|
| Q |
306 |
tgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcct |
405 |
Q |
| |
|
|||| || ||| ||||||| ||||| |||| | | ||| |||||||| ||||||||||||||||| || ||||||||||||||||||||| || |||| |
|
|
| T |
43625885 |
tgtattttacaataatcattggtttgtcatccacccca---atgaccctgaatggccacaacatgatatcattttgaacaacagaatcactaaacttcct |
43625981 |
T |
|
| Q |
406 |
accaattaacctcttagcatctg |
428 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
43625982 |
accgattaacctcttagcatctg |
43626004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 8 - 428
Target Start/End: Complemental strand, 16661987 - 16661566
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| ||||||| || || ||||| | |||||| ||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
16661987 |
aaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctgctgcagtgggttca |
16661888 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||||||| | || ||||| |||||| ||||||||||||| ||||| |||||||| |||||||| || || || ||||| ||||| ||||| ||| |
|
|
| T |
16661887 |
ttgattatcctcacaacgttaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcaggaacagtgacaactgcat |
16661788 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
| || || | || | ||| | || ||||| || |||| ||||| |||| || ||||| |||||||| ||| || ||||||| |||||||| |
|
|
| T |
16661787 |
ttttaaccggtgattccaaataagcctctgcaacctccttcatgtttgtgaggacaatagatgagatttcctcggcacaaaggagcttctcctgaccctt |
16661688 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
|||||||||||||||| | ||||| ||||| |||||| || ||| | || |||||||||| || |||||||||||||| | |||||| | ||||| |
|
|
| T |
16661687 |
gtacttaacactaatcgtaggtttgtcattaacaccagcaataaccttgaacggccacaacagtatatctttttgaacaacggggtcactaaatttccta |
16661588 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
16661587 |
ccaattaacctcttagcatctg |
16661566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 428
Target Start/End: Original strand, 12234862 - 12235283
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| ||||| || || ||||| ||||| |||||||||| | | ||| ||| |||||||||||| ||||||||||| ||| || | | |||||| |
|
|
| T |
12234862 |
aaaagtgccaccgccgagatcaaaaacaaaaatatttcgttctccaacacaatcagttctcttgtcaagaccatatgcaacagcggctgccatgggttcg |
12234961 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|| |||| || ||||| || |||||| || ||||||||||||| || ||||||||||||||||||||||| || |||||||| |||||||| ||| |
|
|
| T |
12234962 |
ttcattaccctcataacattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcacggtaacaactgcat |
12235061 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||| || | | || ||||| || || | ||||| ||||||||| || | ||| ||||||| ||| || || | ||||||||| ||||||| |
|
|
| T |
12235062 |
tcttaactggaaattgtaaatatgcctcagcgatttctcgcatctttgtgagtaccatagatgatacttcttcgggacatagctgcttctctcgaccctt |
12235161 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
|||||| ||| ||||||| ||||| ||||| |||||| |||| | |||||||||||||| | || | ||||||||| ||||||| || ||||| |
|
|
| T |
12235162 |
gtacttgacaataatcatgggtttgtcattgacaccagcagcgaccttgaatggccacaacatcacatcatcttgaacaacttgatcactaaacttccta |
12235261 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
12235262 |
ccaattaacctcttagcatctg |
12235283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 427
Target Start/End: Original strand, 7542399 - 7542819
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||||| |||||||| | | |||| ||| |||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
7542399 |
aaaagtgccaccgccaagatcaaaaacaaaaatatttcgctctccatcataatcagttctcttgtcaaggccatatgcaacagctgcggcagtaggttca |
7542498 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|| ||| || ||||| || |||||| ||||||| |||||||| || |||||||||||||||||||| || || ||||| ||||||||||| ||| |
|
|
| T |
7542499 |
ttcattgccctcataacattgaggccagcaatggcacccgcatctatagtggcttttcgttgagaatcattaaaataagcaggtacagtaacaactgcat |
7542598 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|| |||||| | || ||| | || |||| ||||| ||||||||| || | ||| ||||||| || ||| || | ||| ||||| ||| |||| |
|
|
| T |
7542599 |
tcgtcacagttgtttctaaatacgactcagcaatttctcgcatctttgtgagtaccatagatgatacctcttcagcatggagttgtttctcctgatcctt |
7542698 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
||||||||| ||||||| ||| | ||||| ||||| | | ||| | |||||||| |||| || || | ||||||||||| ||||||| || ||||| |
|
|
| T |
7542699 |
gtacttaacggtaatcatgggtctgtcattgtcacccgcagtcaccttgaatggccataacagtatatcatcttgaacaacaggatcactaaacttccta |
7542798 |
T |
|
| Q |
407 |
ccaattaacctcttagcatct |
427 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
7542799 |
ccaattaacctcttagcatct |
7542819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 215
Target Start/End: Original strand, 14703581 - 14703789
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||| | | || ||| |||||||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
14703581 |
aaaagtaccaccaccaagatcaaagacaaatatattacgttctccaccataatcagttctcttgtcaaggccatatgcaatagctgcagctgtaggttca |
14703680 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|| |||| || ||||| || || || || |||||||||| || || ||||||| |||||||||| | || || |||||||| |||||||| ||| |
|
|
| T |
14703681 |
ttcattaccctcataacattgaggccggcaataacaccagcatccatagtggcttttctttgagaatcactaaaataagcaggcaccgtaacaactgcat |
14703780 |
T |
|
| Q |
207 |
tcttcacag |
215 |
Q |
| |
|
|||| |||| |
|
|
| T |
14703781 |
tcttaacag |
14703789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 428
Target Start/End: Complemental strand, 12258436 - 12258155
Alignment:
| Q |
147 |
catctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttagatatgtttcggcaacttctct |
246 |
Q |
| |
|
||||||| || ||||| | ||| |||||| | || |||||||||||||||||||| ||||||| || | || || ||||| || |||| ||||| |
|
|
| T |
12258436 |
catctatagtggctttcctttgtgaatcactaaaatatgcaggcacagtaacaactgcattcttaacgggtgattctaaatatgcctcagcaatttctcg |
12258337 |
T |
|
| Q |
247 |
catctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcaccagtg |
346 |
Q |
| |
|
||||||||| | | || ||||||| |||||| ||| || |||||||||||| ||||||||| || ||||||| ||||| |||| |||||| |
|
|
| T |
12258336 |
catctttgtcaataccacagatgatacttcctcggcacaaagctgcttctcttgattcttgtactttaccgtaatcatgggtttgccattgacaccagca |
12258237 |
T |
|
| Q |
347 |
atgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
|||| |||||||||||||||| || || | |||||| || ||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
12258236 |
gtgactttaaatggccacaacattatatcatcttgaactacttgatcactaaacttcctaccaattaacctcttagcatctg |
12258155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 428
Target Start/End: Original strand, 11999700 - 11999988
Alignment:
| Q |
140 |
gcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttagatatgtttcggcaa |
239 |
Q |
| |
|
||||| |||||||| || |||||||||||||||||| | || || || || ||||||||||| |||||||| || | || || ||||| || |||| |
|
|
| T |
11999700 |
gcaccggcatctatagtggcttttcgttgagaatcactaaaataagctggtacagtaacaacaacattctttaccggtgattctaaatatgcctcagcaa |
11999799 |
T |
|
| Q |
240 |
cttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcattctc |
339 |
Q |
| |
|
||||| |||||| || || | ||| ||||||| ||| ||| ||| | |||||||| || || |||||||||||| |||| || ||||| ||||| | |
|
|
| T |
11999800 |
tttctcgcatcttcgttagtaccatagatgatacttcttcagcacatagctgcttctcctggcctttgtacttaacagtaattattggtttgtcattgac |
11999899 |
T |
|
| Q |
340 |
accagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
| ||| ||||| | |||||||| |||| || | |||||||||| ||||||| || ||| ||||||||||||||||||||||| |
|
|
| T |
11999900 |
atcagcagtgaccttgaatggccataacaatccatcatcttgaacaacaagatcactaaacttccaaccaattaacctcttagcatctg |
11999988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 143; Significance: 6e-75; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 8 - 429
Target Start/End: Complemental strand, 9335886 - 9335464
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
||||||||| ||||| || ||||||||||| |||||||| |||| ||||| ||| ||||||| |||| |||||||||||||||||| |||||||||| |
|
|
| T |
9335886 |
aaaagtaccgccacccagatcaaagacaaaaatatttcggttaccatcacagtcatttctcttatcaaggccatatgcaatagctgcagcagtaggttca |
9335787 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|||||||| ||||||||||||| ||||| || | ||||||||||||||| || ||||| ||||||||||||||||| || ||||| ||||||||| ||| |
|
|
| T |
9335786 |
ttgattatccgaatgacattaaggccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctggcacggtaacaacggcat |
9335687 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||| || | ||| | ||||| || ||||| ||||||||||||||||| | ||| || |||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
9335686 |
tcttgaccggcgaccccaaatatgcctccgcaacctctctcatctttgtaagcaacatagaagatatttcctcagcacaaaagtgcttctcttgaccctt |
9335587 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
||| |||||| ||||||| ||||| ||||| |||||| || ||| | ||||||||||||| || ||| |||||||||| ||||||| || ||||| |
|
|
| T |
9335586 |
gtagttaacagtaatcataggtttgtcattaacaccagaaataaccttgaatggccacaacaatatatctctttgaacaaccagatcactaaacttccta |
9335487 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctgc |
429 |
Q |
| |
|
||| |||| |||||||||||||| |
|
|
| T |
9335486 |
ccagttaatctcttagcatctgc |
9335464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 428
Target Start/End: Original strand, 35132621 - 35133040
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| ||||||||||| || |||||||| |||||| ||| | | ||| ||| ||||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
35132621 |
aaaagtgccaccaccaagatcgaagacaaaaatattttgttctccagcacaatcagatctcttgtcaaggccatatgcaaccgctgcggcagtaggttca |
35132720 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacat |
206 |
Q |
| |
|
|| |||| | || ||||| | |||||| | |||||||||||||| || |||||||||||||||||| | || || ||||||||||||||||| ||| |
|
|
| T |
35132721 |
ttcattactctcataacattgggaccagcaatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcaggcacagtaacaactgcat |
35132820 |
T |
|
| Q |
207 |
tcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatcatcgatgatatttcctcaacactaacttgcttctcttgaccctt |
306 |
Q |
| |
|
|||| |||| || || ||||| | |||| ||||| ||||||||| || | ||| ||||||| ||| || || | |||||| || | | |||| |
|
|
| T |
35132821 |
tcttaacagttgattctaaatatg--cctgcaatttctcgcatctttgtgagtaccatggatgatacttcttccgcatagagttgcttttcctcatcctt |
35132918 |
T |
|
| Q |
307 |
gtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctccta |
406 |
Q |
| |
|
||||||||| ||||||| ||||| ||||| |||| | ||||| | |||||||| | || || || | |||||||| || ||||||| || ||||| |
|
|
| T |
35132919 |
gtacttaaccgtaatcatgggtttgtcatttacaccggcagtgaccttgaatggccatagcagtatatcatcttgaacaataggatcactaaacttccta |
35133018 |
T |
|
| Q |
407 |
ccaattaacctcttagcatctg |
428 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
35133019 |
ccaattaaccttttagcatctg |
35133040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 54396729 - 54396802
Alignment:
| Q |
140 |
gcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcac |
213 |
Q |
| |
|
|||||||||||| | ||||||| ||||||||||||||||| || ||||| ||||||||||| |||||||||| |
|
|
| T |
54396729 |
gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattcttcac |
54396802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 30775425 - 30775613
Alignment:
| Q |
8 |
aaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcg |
107 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| ||||| | | | ||||| || |||||| |||| ||||||||||||||||| |||| || || |
|
|
| T |
30775425 |
aaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctca |
30775524 |
T |
|
| Q |
108 |
ttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagt |
195 |
Q |
| |
|
|| |||||| || |||||||| |||||| ||||||||||||| || || |||||||| || | ||||||||| || ||||||||||| |
|
|
| T |
30775525 |
ttaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacagt |
30775613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 23596521 - 23596377
Alignment:
| Q |
67 |
tcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttttcg |
165 |
Q |
| |
|
|||| |||| |||||| |||||||| ||| |||| || ||||| || ||| || ||||| ||||||| | || |||||||||| | ||||||| || |
|
|
| T |
23596521 |
tcttatcaagaccataagcaatagcggcagcagtgggctcgttaataattctcatcacattgagtccagaaatgacaccagcatccttagtagcttgacg |
23596422 |
T |
|
| Q |
166 |
ttgagaatcattgaagtatgcaggcacagtaacaacgacattctt |
210 |
Q |
| |
|
||| ||||| ||||||||||||||||| || |||||| ||||||| |
|
|
| T |
23596421 |
ttgtgaatcgttgaagtatgcaggcacggttacaacggcattctt |
23596377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 30775774 - 30775846
Alignment:
| Q |
356 |
aatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
||||||||||||| || |||||||||||||||| || ||| | |||||||||||||||| |||||||||| |
|
|
| T |
30775774 |
aatggccacaacaaaatatctttttgaacaacagggtcgctaaatttcctaccaattaaccttttagcatctg |
30775846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 23587594 - 23587525
Alignment:
| Q |
141 |
caccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattctt |
210 |
Q |
| |
|
|||| |||||| | ||||||| ||||| ||||| |||||||| ||||||||||| |||||| ||||||| |
|
|
| T |
23587594 |
caccggcatcttttgtagcttgacgttgtgaatcgttgaagtaagcaggcacagttacaacggcattctt |
23587525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 428
Target Start/End: Original strand, 43745078 - 43745441
Alignment:
| Q |
64 |
ttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagc-atggcaccagcatctatggtagcttt |
162 |
Q |
| |
|
||||||| || | ||||||||||||||||||| |||| ||||| |||||||| | || |||| ||| ||||| |||||||||||||||| || ||||| |
|
|
| T |
43745078 |
ttctcttttccagaccatatgcaatagctgcagcagtgggttcattgattatcttcataacatcaagcccagcaatggcaccagcatcta--gtggcttt |
43745175 |
T |
|
| Q |
163 |
tcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacagacgaagttagatatgtttcggcaacttctctcatctttgtaaggatc |
262 |
Q |
| |
|
|| ||| |||||||||| || || |||||||||||||| ||||||| |||| | | | | |||| || |||| || | ||||||||| || ||| |
|
|
| T |
43745176 |
ccgctgataatcattgaaataagccggcacagtaacaactgcattcttgacaggcaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatc |
43745275 |
T |
|
| Q |
263 |
atcgatgatatttcctcaacactaacttgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggcc |
362 |
Q |
| |
|
|| ||||| ||||| || ||| | |||||||| || ||||||||||||||| ||||| ||||| |||||| || | |||||| | || |||| |
|
|
| T |
43745276 |
atagatgagatttcttcggcacataggtgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggcc |
43745375 |
T |
|
| Q |
363 |
acaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
||||| | || || ||||||||| |||||||| || || ||||||||||||||||||||||||||| |
|
|
| T |
43745376 |
acaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg |
43745441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 428
Target Start/End: Original strand, 28220407 - 28220545
Alignment:
| Q |
290 |
tgcttctcttgacccttgtacttaacactaatcatcggtttatcattctcaccagtgatgaccctaaatggccacaacatgatgtctttttgaacaacag |
389 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||| ||||| || ||| || | |||||| | |||||||||||| | || || | ||||||||||| |
|
|
| T |
28220407 |
tgcttctcctgtcccttgtacttaacagaaatcatgggtttgtcgttcgttccggaaatgaccttgaatggccacaactttatatcatcttgaacaacag |
28220506 |
T |
|
| Q |
390 |
aatcactatacctcctaccaattaacctcttagcatctg |
428 |
Q |
| |
|
| |||||| || ||||||||||||||||||||||||||| |
|
|
| T |
28220507 |
agtcactaaacttcctaccaattaacctcttagcatctg |
28220545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 416
Target Start/End: Complemental strand, 42555599 - 42555530
Alignment:
| Q |
347 |
atgaccctaaatggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacc |
416 |
Q |
| |
|
|||||| | |||||||||||| | ||||| |||||||||||| ||||| || || ||||||||||||||| |
|
|
| T |
42555599 |
atgaccttgaatggccacaacttcatgtcattttgaacaacataatcattaaacttcctaccaattaacc |
42555530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 28220180 - 28220332
Alignment:
| Q |
64 |
ttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagca-tggcaccagcatctatggtagcttt |
162 |
Q |
| |
|
|||| ||||| || |||||||||||||| ||| |||| ||||| |||| ||| | ||||| || |||||| ||| ||| ||||||||||| ||||| |
|
|
| T |
28220180 |
ttcttttgtccaatccatatgcaatagcagcagcagtgggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggcttt |
28220279 |
T |
|
| Q |
163 |
tcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacag |
215 |
Q |
| |
|
|| ||| |||||||||| || ||||||||||||| ||| ||||||| |||| |
|
|
| T |
28220280 |
ccgctgataatcattgaaataagcaggcacagtaataactgcattcttgacag |
28220332 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 11314659 - 11314610
Alignment:
| Q |
80 |
atatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaa |
129 |
Q |
| |
|
||||||||| |||||| || ||||||| ||||||||||| |||||||||| |
|
|
| T |
11314659 |
atatgcaatggctgcagcactaggttcattgattatttgcatgacattaa |
11314610 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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