View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: SO5822A-LTR4-TNT-insertion-2 (Length: 706)

Name: SO5822A-LTR4-TNT-insertion-2
Description: SO5822A-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] SO5822A-LTR4-TNT-insertion-2
SO5822A-LTR4-TNT-insertion-2
[»] chr4 (67 HSPs)
chr4 (8-697)||(37653779-37654468)
chr4 (594-697)||(19878603-19878707)
chr4 (594-697)||(1819517-1819621)
chr4 (594-697)||(40345445-40345549)
chr4 (592-697)||(4505289-4505396)
chr4 (605-697)||(52957888-52957982)
chr4 (594-697)||(37624511-37624615)
chr4 (592-697)||(50203030-50203133)
chr4 (594-697)||(19451309-19451416)
chr4 (607-697)||(30261226-30261318)
chr4 (594-691)||(52253799-52253898)
chr4 (594-697)||(38991859-38991966)
chr4 (593-697)||(44571963-44572071)
chr4 (605-697)||(29370569-29370662)
chr4 (594-697)||(45043686-45043791)
chr4 (594-697)||(47817690-47817797)
chr4 (606-697)||(52915640-52915733)
chr4 (593-697)||(10573252-10573360)
chr4 (601-697)||(25231136-25231234)
chr4 (609-697)||(52848152-52848242)
chr4 (609-696)||(41920408-41920497)
chr4 (594-697)||(18429943-18430048)
chr4 (605-697)||(41496170-41496264)
chr4 (594-697)||(54042281-54042386)
chr4 (609-696)||(31917926-31918014)
chr4 (600-697)||(34316182-34316281)
chr4 (591-686)||(49089412-49089512)
chr4 (594-694)||(2728499-2728601)
chr4 (630-695)||(6991361-6991427)
chr4 (609-697)||(19930683-19930773)
chr4 (594-655)||(34124246-34124308)
chr4 (644-697)||(39982108-39982162)
chr4 (609-697)||(44060977-44061067)
chr4 (605-691)||(51733598-51733687)
chr4 (594-697)||(24940833-24940938)
chr4 (609-697)||(29519623-29519712)
chr4 (642-697)||(21864481-21864537)
chr4 (642-697)||(21920342-21920398)
chr4 (638-697)||(45839636-45839696)
chr4 (595-697)||(49080575-49080678)
chr4 (630-696)||(20448030-20448097)
chr4 (614-697)||(2493076-2493161)
chr4 (600-697)||(7906094-7906193)
chr4 (594-697)||(22220457-22220562)
chr4 (609-680)||(33033049-33033120)
chr4 (609-696)||(46392160-46392248)
chr4 (609-696)||(56460053-56460141)
chr4 (594-697)||(8970995-8971101)
chr4 (605-656)||(22212304-22212355)
chr4 (615-696)||(27943644-27943727)
chr4 (591-626)||(29840260-29840295)
chr4 (594-661)||(32141256-32141323)
chr4 (593-656)||(39009385-39009448)
chr4 (594-695)||(40837080-40837186)
chr4 (630-696)||(50623074-50623141)
chr4 (606-656)||(1868236-1868286)
chr4 (599-656)||(52732555-52732613)
chr4 (597-653)||(30105875-30105932)
chr4 (594-627)||(37654618-37654651)
chr4 (630-697)||(40010971-40011040)
chr4 (594-631)||(50623288-50623325)
chr4 (594-656)||(54711007-54711070)
chr4 (593-656)||(31817312-31817376)
chr4 (594-626)||(32141132-32141164)
chr4 (630-697)||(34413645-34413713)
chr4 (661-697)||(38510343-38510379)
chr4 (596-655)||(51930553-51930613)
[»] chr8 (52 HSPs)
chr8 (594-697)||(39698760-39698864)
chr8 (589-697)||(39463208-39463318)
chr8 (593-696)||(9880596-9880700)
chr8 (592-697)||(4989431-4989537)
chr8 (594-697)||(15160540-15160645)
chr8 (594-697)||(37559627-37559732)
chr8 (605-697)||(43084721-43084813)
chr8 (594-697)||(4760652-4760756)
chr8 (594-697)||(43448671-43448775)
chr8 (594-697)||(396307-396412)
chr8 (590-697)||(17920906-17921015)
chr8 (605-696)||(40362400-40362493)
chr8 (593-696)||(35356262-35356365)
chr8 (605-697)||(9812138-9812232)
chr8 (605-693)||(39765957-39766047)
chr8 (588-696)||(44713482-44713592)
chr8 (594-697)||(31693715-31693820)
chr8 (605-696)||(6116100-6116193)
chr8 (609-696)||(7839427-7839516)
chr8 (594-697)||(9304727-9304832)
chr8 (609-696)||(29025841-29025930)
chr8 (605-697)||(29312287-29312380)
chr8 (594-697)||(514830-514933)
chr8 (630-697)||(6374405-6374473)
chr8 (630-697)||(40228565-40228633)
chr8 (609-697)||(14234312-14234401)
chr8 (594-655)||(18673236-18673297)
chr8 (594-697)||(31899342-31899446)
chr8 (593-656)||(38329165-38329229)
chr8 (609-656)||(36915337-36915384)
chr8 (594-674)||(9022349-9022431)
chr8 (594-670)||(22699337-22699415)
chr8 (594-655)||(35052425-35052487)
chr8 (605-686)||(43724347-43724429)
chr8 (659-697)||(44342880-44342918)
chr8 (609-697)||(45358988-45359078)
chr8 (606-659)||(5588606-5588659)
chr8 (644-696)||(43974886-43974939)
chr8 (612-656)||(21200966-21201010)
chr8 (599-697)||(34796772-34796872)
chr8 (638-697)||(40400441-40400501)
chr8 (593-655)||(8471234-8471297)
chr8 (593-632)||(34168367-34168406)
chr8 (594-659)||(1774192-1774258)
chr8 (659-697)||(19438257-19438295)
chr8 (658-696)||(41679339-41679377)
chr8 (594-697)||(13368042-13368147)
chr8 (600-656)||(15750437-15750494)
chr8 (594-627)||(39765783-39765816)
chr8 (609-656)||(5790828-5790876)
chr8 (658-694)||(17655927-17655963)
chr8 (591-627)||(39463465-39463501)
[»] scaffold0294 (1 HSPs)
scaffold0294 (594-697)||(3598-3703)
[»] chr1 (74 HSPs)
chr1 (594-696)||(38531390-38531493)
chr1 (594-697)||(32807030-32807135)
chr1 (594-697)||(24483343-24483447)
chr1 (591-696)||(26755171-26755278)
chr1 (594-697)||(44108552-44108658)
chr1 (609-697)||(15823003-15823093)
chr1 (589-697)||(29567845-29567955)
chr1 (594-697)||(5463530-5463634)
chr1 (605-696)||(31798555-31798647)
chr1 (594-697)||(46554754-46554857)
chr1 (594-697)||(50249264-50249369)
chr1 (594-697)||(16757286-16757390)
chr1 (594-697)||(25487043-25487147)
chr1 (594-697)||(27720913-27721017)
chr1 (591-697)||(44258599-44258709)
chr1 (594-696)||(46045928-46046031)
chr1 (589-697)||(9915392-9915502)
chr1 (609-697)||(12591174-12591264)
chr1 (594-693)||(18794638-18794739)
chr1 (609-697)||(10842750-10842839)
chr1 (594-697)||(34032172-34032277)
chr1 (594-697)||(48025346-48025451)
chr1 (594-697)||(44557136-44557240)
chr1 (594-697)||(34047327-34047433)
chr1 (591-697)||(52024326-52024433)
chr1 (597-696)||(14373506-14373607)
chr1 (594-697)||(25151770-25151874)
chr1 (610-697)||(26352173-26352262)
chr1 (594-697)||(31491862-31491967)
chr1 (605-697)||(1740733-1740828)
chr1 (594-697)||(2610922-2611026)
chr1 (605-697)||(49468803-49468897)
chr1 (594-697)||(13408357-13408462)
chr1 (593-697)||(24611612-24611717)
chr1 (609-697)||(27208959-27209048)
chr1 (592-686)||(15573557-15573655)
chr1 (615-697)||(35848025-35848111)
chr1 (594-694)||(49426510-49426609)
chr1 (594-656)||(12002200-12002263)
chr1 (593-656)||(38132303-38132366)
chr1 (594-655)||(2458962-2459024)
chr1 (594-655)||(28200361-28200423)
chr1 (644-697)||(50094234-50094288)
chr1 (599-694)||(30292899-30292996)
chr1 (600-694)||(12484723-12484819)
chr1 (638-697)||(26595161-26595221)
chr1 (594-674)||(43929638-43929721)
chr1 (609-697)||(52125228-52125319)
chr1 (658-697)||(49402963-49403002)
chr1 (594-696)||(24884366-24884473)
chr1 (609-697)||(49900849-49900939)
chr1 (645-697)||(14593412-14593465)
chr1 (594-697)||(46286910-46287019)
chr1 (630-697)||(48009001-48009069)
chr1 (592-656)||(50158442-50158506)
chr1 (594-633)||(7375243-7375282)
chr1 (615-697)||(11799437-11799520)
chr1 (590-656)||(30685476-30685543)
chr1 (658-697)||(34110547-34110586)
chr1 (588-627)||(48259769-48259808)
chr1 (595-656)||(672402-672464)
chr1 (658-696)||(25560965-25561003)
chr1 (595-697)||(43358292-43358397)
chr1 (597-631)||(46286731-46286765)
chr1 (667-697)||(51244929-51244959)
chr1 (594-627)||(9915652-9915685)
chr1 (594-631)||(10842984-10843021)
chr1 (594-627)||(11134372-11134405)
chr1 (590-627)||(11134628-11134665)
chr1 (630-696)||(41857304-41857372)
chr1 (630-697)||(33622457-33622525)
chr1 (609-697)||(39477800-39477889)
chr1 (599-631)||(48009214-48009246)
chr1 (587-619)||(50349762-50349794)
[»] chr5 (57 HSPs)
chr5 (609-697)||(7579963-7580052)
chr5 (594-697)||(3306103-3306207)
chr5 (589-697)||(39566132-39566242)
chr5 (594-696)||(42104158-42104263)
chr5 (594-697)||(10345026-10345132)
chr5 (594-697)||(2729880-2729985)
chr5 (595-697)||(14620588-14620692)
chr5 (605-697)||(21319404-21319498)
chr5 (594-697)||(39504676-39504782)
chr5 (605-697)||(27797747-27797840)
chr5 (609-696)||(36164858-36164945)
chr5 (595-697)||(24280950-24281052)
chr5 (595-697)||(24381160-24381262)
chr5 (597-697)||(7316985-7317087)
chr5 (594-697)||(3025025-3025130)
chr5 (594-697)||(4630820-4630924)
chr5 (594-697)||(21195333-21195438)
chr5 (594-697)||(38369827-38369931)
chr5 (594-697)||(34446121-34446226)
chr5 (594-697)||(21375745-21375849)
chr5 (593-693)||(9066521-9066623)
chr5 (593-697)||(26660706-26660814)
chr5 (593-697)||(26932299-26932407)
chr5 (591-656)||(4011771-4011836)
chr5 (597-697)||(7721054-7721154)
chr5 (609-697)||(13761528-13761616)
chr5 (605-696)||(39729924-39730017)
chr5 (609-697)||(6518944-6519035)
chr5 (589-656)||(15776614-15776681)
chr5 (594-696)||(34208989-34209097)
chr5 (596-696)||(43584471-43584574)
chr5 (594-694)||(4911247-4911348)
chr5 (644-697)||(35765994-35766048)
chr5 (594-650)||(7735969-7736025)
chr5 (594-681)||(42978176-42978264)
chr5 (592-656)||(4742402-4742468)
chr5 (658-697)||(11977608-11977647)
chr5 (594-696)||(27600354-27600457)
chr5 (594-656)||(7731728-7731790)
chr5 (593-656)||(4751666-4751732)
chr5 (589-681)||(31041875-31041970)
chr5 (594-670)||(39804169-39804248)
chr5 (594-656)||(166784-166847)
chr5 (594-656)||(4967548-4967611)
chr5 (594-656)||(17674163-17674226)
chr5 (630-696)||(25362895-25362962)
chr5 (609-697)||(8336503-8336593)
chr5 (658-696)||(14005912-14005950)
chr5 (594-696)||(15167106-15167210)
chr5 (589-681)||(31055686-31055780)
chr5 (594-627)||(4631127-4631160)
chr5 (594-627)||(10344855-10344888)
chr5 (664-697)||(32158586-32158619)
chr5 (609-697)||(36073724-36073813)
chr5 (605-656)||(793741-793793)
chr5 (594-626)||(4371559-4371591)
chr5 (630-701)||(14161991-14162063)
[»] chr6 (32 HSPs)
chr6 (594-697)||(24163808-24163912)
chr6 (594-697)||(233988-234093)
chr6 (594-697)||(29399900-29400005)
chr6 (595-697)||(4850589-4850693)
chr6 (594-697)||(19674936-19675039)
chr6 (594-697)||(12063604-12063710)
chr6 (594-697)||(32429240-32429343)
chr6 (609-697)||(32193671-32193761)
chr6 (609-697)||(10520733-10520822)
chr6 (594-697)||(23259419-23259524)
chr6 (609-696)||(18737185-18737272)
chr6 (598-652)||(17345275-17345329)
chr6 (594-656)||(29927162-29927224)
chr6 (604-696)||(1502834-1502928)
chr6 (594-656)||(17246743-17246804)
chr6 (594-697)||(9940602-9940707)
chr6 (600-696)||(12459413-12459509)
chr6 (594-691)||(21272202-21272301)
chr6 (658-697)||(34513697-34513736)
chr6 (594-686)||(10540613-10540707)
chr6 (594-686)||(13503953-13504047)
chr6 (594-697)||(17552341-17552444)
chr6 (644-697)||(29713500-29713554)
chr6 (594-651)||(19600376-19600433)
chr6 (609-696)||(577032-577119)
chr6 (605-691)||(31443546-31443634)
chr6 (594-656)||(1924799-1924862)
chr6 (594-696)||(3988838-3988940)
chr6 (605-656)||(6143050-6143101)
chr6 (635-697)||(31233719-31233782)
chr6 (611-656)||(4132110-4132155)
chr6 (594-656)||(29915494-29915558)
[»] chr3 (69 HSPs)
chr3 (594-697)||(38016330-38016434)
chr3 (599-697)||(30934900-30934997)
chr3 (594-697)||(45213813-45213916)
chr3 (594-696)||(2457962-2458065)
chr3 (593-697)||(30431074-30431179)
chr3 (593-697)||(33194122-33194227)
chr3 (594-697)||(3152897-3153001)
chr3 (594-696)||(32492273-32492374)
chr3 (595-697)||(42571620-42571724)
chr3 (594-697)||(45566761-45566858)
chr3 (594-696)||(19115342-19115445)
chr3 (594-697)||(4392150-4392255)
chr3 (593-692)||(23208387-23208485)
chr3 (594-697)||(39356839-39356944)
chr3 (594-697)||(41850344-41850449)
chr3 (594-697)||(50038262-50038367)
chr3 (594-697)||(50088407-50088512)
chr3 (599-697)||(33024391-33024491)
chr3 (606-697)||(36460774-36460865)
chr3 (594-696)||(41287588-41287694)
chr3 (609-697)||(4758960-4759050)
chr3 (594-696)||(42886704-42886809)
chr3 (605-697)||(53200771-53200865)
chr3 (594-655)||(20512633-20512694)
chr3 (594-697)||(48901671-48901779)
chr3 (594-697)||(48903237-48903345)
chr3 (594-697)||(50646201-50646306)
chr3 (591-697)||(35557849-35557957)
chr3 (587-697)||(51397957-51398069)
chr3 (609-694)||(9189529-9189615)
chr3 (609-697)||(31583525-31583615)
chr3 (637-697)||(11393543-11393604)
chr3 (630-697)||(30426415-30426483)
chr3 (594-656)||(44648536-44648599)
chr3 (630-696)||(47895436-47895503)
chr3 (594-655)||(6938194-6938256)
chr3 (594-695)||(11019919-11020021)
chr3 (597-697)||(36844833-36844935)
chr3 (591-656)||(37225730-37225796)
chr3 (594-691)||(38140906-38141003)
chr3 (621-694)||(42071967-42072041)
chr3 (637-697)||(44676219-44676280)
chr3 (610-696)||(30315279-30315367)
chr3 (610-697)||(40487801-40487887)
chr3 (630-697)||(47137954-47138022)
chr3 (594-653)||(25061660-25061719)
chr3 (590-656)||(25722596-25722663)
chr3 (594-656)||(43169289-43169352)
chr3 (594-656)||(1341055-1341117)
chr3 (594-694)||(23525410-23525512)
chr3 (644-697)||(36729901-36729955)
chr3 (594-651)||(54261370-54261428)
chr3 (609-654)||(2568140-2568185)
chr3 (606-659)||(22730893-22730946)
chr3 (591-691)||(38363737-38363838)
chr3 (594-655)||(44645294-44645355)
chr3 (658-694)||(52654324-52654360)
chr3 (635-697)||(22857086-22857149)
chr3 (610-656)||(26187411-26187458)
chr3 (592-656)||(34059828-34059894)
chr3 (609-697)||(19373555-19373645)
chr3 (607-691)||(31853659-31853745)
chr3 (591-655)||(2662613-2662678)
chr3 (664-697)||(27067634-27067667)
chr3 (594-627)||(44648322-44648355)
chr3 (638-697)||(7230987-7231047)
chr3 (591-627)||(30706667-30706703)
chr3 (589-633)||(42791277-42791321)
chr3 (613-656)||(51058285-51058329)
[»] chr2 (68 HSPs)
chr2 (594-697)||(4132978-4133083)
chr2 (589-696)||(29396775-29396884)
chr2 (594-695)||(29808768-29808869)
chr2 (594-697)||(34546425-34546529)
chr2 (605-697)||(43427381-43427475)
chr2 (588-697)||(441325-441437)
chr2 (594-697)||(12342047-12342152)
chr2 (594-697)||(16792439-16792542)
chr2 (594-697)||(17695919-17696023)
chr2 (594-697)||(13561947-13562053)
chr2 (591-697)||(16807611-16807718)
chr2 (591-697)||(16846892-16846999)
chr2 (592-697)||(5717466-5717572)
chr2 (608-697)||(38926576-38926665)
chr2 (605-697)||(4469467-4469560)
chr2 (609-697)||(14285908-14285997)
chr2 (594-697)||(18719526-18719631)
chr2 (609-694)||(6220501-6220588)
chr2 (635-697)||(45301761-45301824)
chr2 (609-695)||(7874740-7874826)
chr2 (605-697)||(36177941-36178035)
chr2 (594-694)||(7028909-7029009)
chr2 (594-697)||(8539992-8540097)
chr2 (594-697)||(12394015-12394120)
chr2 (594-697)||(45081994-45082099)
chr2 (630-697)||(25383578-25383646)
chr2 (630-697)||(43971495-43971563)
chr2 (594-697)||(22620428-22620533)
chr2 (594-697)||(27964464-27964572)
chr2 (609-697)||(30855074-30855163)
chr2 (594-693)||(32228109-32228209)
chr2 (609-697)||(36685834-36685923)
chr2 (596-697)||(4051797-4051901)
chr2 (600-690)||(17702979-17703071)
chr2 (608-697)||(4288805-4288896)
chr2 (594-691)||(7042286-7042383)
chr2 (630-691)||(28072558-28072620)
chr2 (594-656)||(34225728-34225790)
chr2 (594-655)||(38809567-38809629)
chr2 (609-697)||(42004861-42004950)
chr2 (586-697)||(4658327-4658438)
chr2 (594-697)||(11188586-11188689)
chr2 (630-697)||(12566074-12566142)
chr2 (630-697)||(18579158-18579226)
chr2 (594-656)||(6247675-6247738)
chr2 (588-697)||(35799151-35799261)
chr2 (594-656)||(4840862-4840924)
chr2 (605-697)||(15083246-15083342)
chr2 (594-655)||(43388793-43388855)
chr2 (609-693)||(36106497-36106582)
chr2 (595-655)||(776021-776081)
chr2 (642-697)||(7644649-7644705)
chr2 (610-689)||(14833837-14833917)
chr2 (600-656)||(43344356-43344412)
chr2 (658-694)||(45423638-45423674)
chr2 (594-656)||(4536528-4536591)
chr2 (658-697)||(16463126-16463165)
chr2 (635-697)||(29411692-29411755)
chr2 (609-656)||(34035883-34035930)
chr2 (594-656)||(9366255-9366317)
chr2 (594-656)||(14378359-14378421)
chr2 (591-656)||(24775140-24775206)
chr2 (630-691)||(27986027-27986088)
chr2 (609-696)||(37038864-37038949)
chr2 (594-627)||(441143-441176)
chr2 (594-656)||(681898-681961)
chr2 (609-697)||(10195545-10195633)
chr2 (592-624)||(681677-681709)
[»] scaffold0565 (2 HSPs)
scaffold0565 (599-697)||(9735-9835)
scaffold0565 (594-627)||(9572-9605)
[»] chr7 (75 HSPs)
chr7 (594-697)||(1741946-1742050)
chr7 (592-694)||(22297950-22298052)
chr7 (589-697)||(12977778-12977888)
chr7 (592-697)||(19105093-19105201)
chr7 (594-697)||(27947593-27947699)
chr7 (601-697)||(21752203-21752300)
chr7 (609-696)||(42285877-42285966)
chr7 (589-697)||(18292283-18292394)
chr7 (599-697)||(715955-716054)
chr7 (594-697)||(45948722-45948828)
chr7 (628-697)||(24680117-24680187)
chr7 (594-697)||(44567133-44567238)
chr7 (594-697)||(10599168-10599272)
chr7 (609-697)||(13405219-13405310)
chr7 (594-697)||(34012117-34012220)
chr7 (599-696)||(24780399-24780497)
chr7 (591-696)||(37502271-37502377)
chr7 (594-695)||(8603928-8604032)
chr7 (609-696)||(37815693-37815782)
chr7 (594-697)||(44453089-44453194)
chr7 (595-695)||(23935376-23935479)
chr7 (591-697)||(37490735-37490843)
chr7 (594-685)||(6747180-6747274)
chr7 (599-691)||(2296997-2297091)
chr7 (609-697)||(10476108-10476195)
chr7 (605-697)||(34274759-34274853)
chr7 (596-697)||(41137685-41137787)
chr7 (605-697)||(25440836-25440931)
chr7 (609-697)||(27935735-27935826)
chr7 (591-697)||(40339410-40339517)
chr7 (597-652)||(32097297-32097352)
chr7 (594-656)||(44057734-44057797)
chr7 (605-694)||(45499922-45500013)
chr7 (590-656)||(28044267-28044333)
chr7 (597-696)||(8334365-8334466)
chr7 (599-655)||(36836019-36836076)
chr7 (630-697)||(29531027-29531095)
chr7 (630-697)||(42880026-42880094)
chr7 (658-697)||(31418605-31418644)
chr7 (635-697)||(36807931-36807994)
chr7 (640-697)||(30312459-30312517)
chr7 (644-697)||(48684728-48684782)
chr7 (593-697)||(21819239-21819342)
chr7 (637-697)||(24133222-24133283)
chr7 (594-697)||(31929952-31930057)
chr7 (605-697)||(45933680-45933772)
chr7 (609-687)||(18270546-18270626)
chr7 (594-655)||(32345972-32346035)
chr7 (630-697)||(33939826-33939894)
chr7 (609-696)||(39557292-39557380)
chr7 (630-697)||(40753520-40753588)
chr7 (637-696)||(48843550-48843610)
chr7 (635-697)||(1031151-1031214)
chr7 (597-655)||(4268568-4268627)
chr7 (594-683)||(32501855-32501946)
chr7 (605-656)||(36447206-36447257)
chr7 (594-656)||(40298802-40298865)
chr7 (592-627)||(40299046-40299081)
chr7 (594-656)||(40799945-40800008)
chr7 (637-695)||(42753706-42753765)
chr7 (592-627)||(48684669-48684704)
chr7 (594-659)||(30514928-30514994)
chr7 (594-655)||(36912062-36912124)
chr7 (635-677)||(47187702-47187744)
chr7 (605-653)||(10684969-10685018)
chr7 (592-656)||(19288483-19288548)
chr7 (594-627)||(31929780-31929813)
chr7 (608-656)||(35850559-35850608)
chr7 (609-680)||(7759232-7759304)
chr7 (593-656)||(18733407-18733471)
chr7 (594-655)||(19906368-19906431)
chr7 (589-656)||(22597180-22597248)
chr7 (596-656)||(30392985-30393045)
chr7 (639-686)||(40927163-40927211)
chr7 (589-633)||(42044139-42044183)
[»] scaffold0110 (1 HSPs)
scaffold0110 (594-697)||(24834-24939)
[»] scaffold0078 (1 HSPs)
scaffold0078 (588-697)||(1507-1617)
[»] scaffold2107 (1 HSPs)
scaffold2107 (594-697)||(607-711)
[»] scaffold0182 (1 HSPs)
scaffold0182 (605-697)||(18348-18442)
[»] scaffold0332 (1 HSPs)
scaffold0332 (594-697)||(3904-4009)
[»] scaffold0983 (1 HSPs)
scaffold0983 (594-697)||(780-883)
[»] scaffold0048 (1 HSPs)
scaffold0048 (605-697)||(62598-62692)
[»] scaffold0015 (1 HSPs)
scaffold0015 (585-697)||(21175-21289)
[»] scaffold0047 (1 HSPs)
scaffold0047 (594-656)||(70590-70653)
[»] scaffold0026 (1 HSPs)
scaffold0026 (594-697)||(4094-4200)
[»] scaffold0502 (1 HSPs)
scaffold0502 (594-697)||(665-770)
[»] scaffold0136 (1 HSPs)
scaffold0136 (609-697)||(9422-9504)
[»] scaffold0039 (1 HSPs)
scaffold0039 (609-680)||(75410-75482)
[»] scaffold0003 (1 HSPs)
scaffold0003 (599-655)||(321687-321742)
[»] scaffold0580 (2 HSPs)
scaffold0580 (591-656)||(1592-1658)
scaffold0580 (591-656)||(9331-9397)
[»] scaffold0013 (1 HSPs)
scaffold0013 (600-656)||(45354-45411)


Alignment Details
Target: chr4 (Bit Score: 686; Significance: 0; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 686; E-Value: 0
Query Start/End: Original strand, 8 - 697
Target Start/End: Original strand, 37653779 - 37654468
Alignment:
Q  8 gtcgtaaaaatagggcgatacaggcacaggcacgagcggtagagtcactcgttcgtgcaaaaatgcagcacaaggagttcattatactctgtcttgaaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37653779 gtcgtaaaaatagggcgatacaggcacaggcacgagcggtagagtcactcgttcgtgcaaaaatgcagcacaaggagttcattatactctgtcttgaaga 37653878  T
Q  108 ttgtagtgattggagcaatgcgactacgaggcgcgttgtaatgcaaattgatcctgaattgtcaaggactgtgattgtttccactaagttcgatactagg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37653879 ttgtagtgattggagcaatgcgactacgaggcgcgttgtaatgcaaattgatcctgaattgtcaaggactgtgattgtttccactaagttcgatactagg 37653978  T
Q  208 ataccacaattttcacgtccttctgatgttgaagttttcctttcaccgcctgcatctacgcttgatggatgcattcctggtgattctccgttctttactt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37653979 ataccacaattttcacgtccttctgatgttgaagttttcctttcaccgcctgcatctacgcttgatggatgcattcttggtgattctccgttctttactt 37654078  T
Q  308 cggtgccttctggaagagttggttctggaactcattgtttatactcatctaatgatgatttcaaacaggttcattacttaaaccttttcatttcatttca 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37654079 cggtgccttctggaagagttggttctggaactcattgtttatactcatctaatgatgatttcaaacaggttcattacttaaaccttttcatttcatttca 37654178  T
Q  408 gattcaaagcttcatgcttagatagtagatactaaagataattattcaatggttaaaagtaaaacatcagacagtgtgattggcaaagacccaaagatag 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37654179 gattcaaagcttcatgcttagatagtagatactaaagataattattcaatggttaaaagtaaaacatcagacagtgtgattggcaaagacccaaagatag 37654278  T
Q  508 acaaacaaaataattaggcgtgccattgccaacacatgttttcttgttttattttatgctataaatgaatcattatgcttttttagtactccctcctttt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37654279 acaaacaaaataattaggcgtgccattgccaacacatgttttcttgttttattttatgctataaatgaatcattatgcttttttagtactccctcctttt 37654378  T
Q  608 caaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37654379 caaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttcaattg 37654468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 19878603 - 19878707
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||  |||||||||||||||||||||||  |||| |||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  19878603 tactccctctgtttcaaaatgagtgtcgttttagcaaaaaaaattgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttc 19878702  T
Q  693 aattg 697  Q
    |||||    
T  19878703 aattg 19878707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 1819517 - 1819621
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| |||||||||||||||||||||||  |||| |||||||| |||||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  1819517 tactccatccatttcaaaatgagtgtcgttttagcaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttc 1819616  T
Q  693 aattg 697  Q
    |||||    
T  1819617 aattg 1819621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 40345549 - 40345445
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  40345549 tactccatccgtttcaaattgaatgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttc 40345450  T
Q  693 aattg 697  Q
    |||||    
T  40345449 aattg 40345445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 592 - 697
Target Start/End: Original strand, 4505289 - 4505396
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctt 689  Q
    |||||||||||| ||||||||||||||||| |||||  |||| || |||||| ||||||||||||| || ||||||||||| ||||||||||||||||||    
T  4505289 agtactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 4505388  T
Q  690 ttcaattg 697  Q
    ||||||||    
T  4505389 ttcaattg 4505396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 52957982 - 52957888
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaat-aattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||||| |||||  |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  52957982 tttcaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 52957888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 37624511 - 37624615
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| |||||||||||||| || |||||  |||| |||||||| ||||| ||||||| || ||||||||||| |||||||||||||||||||||    
T  37624511 tactccctccgtttcaaaatgagtgacgctttagcaaaaaaaattgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttc 37624610  T
Q  693 aattg 697  Q
    |||||    
T  37624611 aattg 37624615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 592 - 697
Target Start/End: Original strand, 50203030 - 50203133
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||| ||| ||| ||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||  ||||| |||||||||||||||||||    
T  50203030 agtactccatccgttttaaaatgagtgtcgttttag-caaaaaaattgttttaaaatgaatgtcactttcagt--ccaatgcaataataactttttcttt 50203126  T
Q  691 tcaattg 697  Q
    |||||||    
T  50203127 tcaattg 50203133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 19451416 - 19451309
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtca---aaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctt 689  Q
    |||||||||| ||| |||||||||||| ||||||| |   ||| |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||||    
T  19451416 tactccctccgttttaaaatgagtgtcattttagtgagagaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19451317  T
Q  690 ttcaattg 697  Q
    ||||||||    
T  19451316 ttcaattg 19451309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 607 - 697
Target Start/End: Original strand, 30261226 - 30261318
Alignment:
Q  607 tcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||| || ||||||||||| |||||||||  |||||||||||||||    
T  30261226 tcaaaatgagtgtcgttttagtcaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttcttttcaattg 30261318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 594 - 691
Target Start/End: Original strand, 52253799 - 52253898
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||||||||||| ||||||||||| | |||| |||||||| |||||||||||||  ||||||||||||| |||||||||||| |||||||    
T  52253799 tactccctccgtttcaaaatgaatgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctttt 52253898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 38991966 - 38991859
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaat----tcagtttccaatacaataataactttttctt 689  Q
    |||||| ||| ||||||||||| ||||||| ||| ||||| ||||||||||||| ||||||||||    || ||||||||| ||||||||||||||||||    
T  38991966 tactccatccgtttcaaaatgattgtcgttatagccaaaaaaattgttttaaaacgaatgtcaatttcatcggtttccaatgcaataataactttttctt 38991867  T
Q  690 ttcaattg 697  Q
    || |||||    
T  38991866 ttgaattg 38991859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 593 - 697
Target Start/End: Complemental strand, 44572071 - 44571963
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttag---tcaaaataattgttttaaaatgaatgtc-aattcagtttccaatacaataataactttttct 688  Q
    ||||||||||| ||| |||||||||||||||||||     |||| |||||||||||||||||||||   ||||||||||||| |||||| ||||||||||    
T  44572071 gtactccctccgttttaaaatgagtgtcgttttagctaaaaaaaaaattgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttct 44571972  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  44571971 tttcaattg 44571963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 29370569 - 29370662
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||| |||||||||||| ||||| || | ||||||||| ||||||| || |||||| ||||| |||||||||||||||||||||||||    
T  29370569 tttcaaaatgggtgtcgttttagccaaaaaaaatattttaaaataaatgtcactttcagttttcaatataataataactttttcttttcaattg 29370662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 45043791 - 45043686
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||| |||||||||||||||||| | |||| || |||||||||||||||||||| || |||||| |||| ||||||||| ||||||||||    
T  45043791 tactccatccgttttaaaatgagtgtcgttttatttaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctttt 45043692  T
Q  692 caattg 697  Q
    ||||||    
T  45043691 caattg 45043686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 47817690 - 47817797
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc---aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctt 689  Q
    |||||||||| ||||||||||||||||||||||| |   |||| |||||||| ||||||||| | |  |||||||| |||| ||||||||||||||||||    
T  47817690 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaaaattgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttctt 47817789  T
Q  690 ttcaattg 697  Q
    ||||||||    
T  47817790 ttcaattg 47817797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 606 - 697
Target Start/End: Complemental strand, 52915733 - 52915640
Alignment:
Q  606 ttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||| ||||| ||||| || |||||| ||||||||||||  || ||||||||||| ||||||||||||||||||||||||||    
T  52915733 ttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttcttttcaattg 52915640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 593 - 697
Target Start/End: Complemental strand, 10573360 - 10573252
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttag---tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttct 688  Q
    ||||||||||  ||| |||||||||||||||||||     |||| |||||||| |||||||||||||  || |||||||||| |||||||||||||||||    
T  10573360 gtactccctctattttaaaatgagtgtcgttttagcaccaaaaaaaattgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttct 10573261  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  10573260 tttcaattg 10573252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 697
Target Start/End: Original strand, 25231136 - 25231234
Alignment:
Q  601 tccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||| ||||||||||||| |||||  |||| || |||||||||||||||||||| || || |||||||| ||||||||||||||||||||| ||||    
T  25231136 tcctttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttctattg 25231234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 52848242 - 52848152
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||  |||| || |||||||||||||||||||| || || |||||||| ||||||||| ||||||||||||||||    
T  52848242 aaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttcaattg 52848152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 609 - 696
Target Start/End: Complemental strand, 41920497 - 41920408
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||| |||||||| |||| || |||||||||||| ||||||| || ||||||||||  |||||||||||||||||||||||||    
T  41920497 aaaatgagtgttgttttagttaaaaaaaattgttttaaaataaatgtcattttcagtttccaaagcaataataactttttcttttcaatt 41920408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 18429943 - 18430048
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaattcagtttccaatacaataataactttttctttt 691  Q
    |||||||||||||||||||| | |||||||||||  |||| ||  || ||||||||||||||| | ||  | |||| || ||||||||||||||||||||    
T  18429943 tactccctccttttcaaaataaatgtcgttttagcaaaaaaaaaattattttaaaatgaatgttactttcggttcccattcaataataactttttctttt 18430042  T
Q  692 caattg 697  Q
    ||||||    
T  18430043 caattg 18430048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 41496170 - 41496264
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaa-aataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||| ||||||  || || |||||||| ||||| ||| ||| || |||||| |||||||||||||||||||||||||||||||    
T  41496170 tttcaaaatgagtgtcattttagctaacaaaaattgtttcaaaataaatctcactttcagttttcaatacaataataactttttcttttcaattg 41496264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 54042386 - 54042281
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||| ||||| ||| ||||||||||| |||||||  |||| || |||||||||||||||||||| || | |||||||||  |||||||| ||||||||||    
T  54042386 tacttcctccgtttaaaaatgagtgttgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttctttt 54042287  T
Q  692 caattg 697  Q
    ||||||    
T  54042286 caattg 54042281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 31917926 - 31918014
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||| |||||||||||||  |||| |||||||||||||||||| |||  ||||| ||||||| ||||||||  |||||||||||||||    
T  31917926 aaaataagtgtcgttttagataaaaaaattgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttcttttcaatt 31918014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 697
Target Start/End: Original strand, 34316182 - 34316281
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtcaaa-ataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||| |||||||||||||||||| | ||| | |||| ||||||||| ||||||| || ||||||||||| ||||||||| ||||| ||||||||||    
T  34316182 ctccgttttaaaatgagtgtcgttttaattaaacaaaattattttaaaataaatgtcactttcagtttccaatgcaataataattttttattttcaattg 34316281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 591 - 686
Target Start/End: Original strand, 49089412 - 49089512
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttag----tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttt 685  Q
    ||||||||||||| |||||||||||||||||||||||      |||| |||||||| |||||||||||||  || ||||| |||| ||||||||||||||    
T  49089412 tagtactccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaaaaattgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttt 49089511  T
Q  686 t 686  Q
    |    
T  49089512 t 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 694
Target Start/End: Complemental strand, 2728601 - 2728499
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgtttt-aaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||  |||||||||||||||||||||||  |||| ||     || ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  2728601 tactccctctgtttcaaaatgagtgtcgttttagcaaaaaaaaaaaaattcaaaatgaatgtcattttcagtttccaatgcaataataactttttctttt 2728502  T
Q  692 caa 694  Q
    |||    
T  2728501 caa 2728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 695
Target Start/End: Complemental strand, 6991427 - 6991361
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaat 695  Q
    |||| |||| ||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  6991427 aaaaaaattattttaaaatgaatgtcactttcagttttcaatacaataataattttttcttttcaat 6991361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 19930683 - 19930773
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||| |||||||||||  |||| || |||||| ||||||||||||| || || ||||| || ||||||||||||||||||||||||||    
T  19930683 aaaatgaatgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttcttttcaattg 19930773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 34124246 - 34124308
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtc 655  Q
    |||| ||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||    
T  34124246 tacttcctccattttaaaatgagtgtcgttttagtcaaaaaaatttgttttaaaatgaatgtc 34124308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 697
Target Start/End: Original strand, 39982108 - 39982162
Alignment:
Q  644 aaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  39982108 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 39982162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 44060977 - 44061067
Alignment:
Q  609 aaaatgagtgtcgtttt-agtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||| | |  ||| | |||||||| |||||||||||  |||| |||| ||||||||||||||||||||||||||||||    
T  44060977 aaaatgagtgtcgttttaactataaaaatttgttttataatgaatgtcactttcattttctaatacaataataactttttcttttcaattg 44061067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 605 - 691
Target Start/End: Complemental strand, 51733687 - 51733598
Alignment:
Q  605 tttcaaaatgagtgtcgttttag--tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||||||||||||||||    |||| |||||||| |||||||||||||  ||||||||| ||| ||||||||| ||||||||||    
T  51733687 tttcaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctttt 51733598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 24940833 - 24940938
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaattcag-tttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||||| | ||||  ||||| | || |||| ||||||||||||| ||  | |||||||| ||||||||||||||||||||    
T  24940833 tactccatccgtttcaaaatgagtgttggtttatccaaaaaagtttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttctttt 24940932  T
Q  692 caattg 697  Q
    ||||||    
T  24940933 caattg 24940938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 29519712 - 29519623
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||| ||||||   |||| |||||||| ||||| ||||||| ||  |||||||||| ||||||||||||||| ||||||||||    
T  29519712 aaaatgagtgttgttttatctaaaaaaattgtttcaaaataaatgtcacttttagtttccaatgcaataataactttttattttcaattg 29519623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 697
Target Start/End: Complemental strand, 21864537 - 21864481
Alignment:
Q  642 ttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||    
T  21864537 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattg 21864481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 697
Target Start/End: Complemental strand, 21920398 - 21920342
Alignment:
Q  642 ttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||    
T  21920398 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattg 21920342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 697
Target Start/End: Original strand, 45839636 - 45839696
Alignment:
Q  638 tgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||| |||||||||||| || ||||||| ||||||||||||||||||| ||||||||||    
T  45839636 tgttttgaaatgaatgtcactttcagtttctaatacaataataactttttattttcaattg 45839696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 595 - 697
Target Start/End: Complemental strand, 49080678 - 49080575
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    ||||||||| ||||||||||||||| ||||| |   |||| |||||||| |||||||||||||  ||||||||  ||| ||||||||||||||| |||||    
T  49080678 actccctccatttcaaaatgagtgttgtttttgcaaaaaaaaattgtttcaaaatgaatgtcactttcagttt-taatgcaataataactttttattttc 49080580  T
Q  693 aattg 697  Q
    |||||    
T  49080579 aattg 49080575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 630 - 696
Target Start/End: Original strand, 20448030 - 20448097
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| |||||||| ||||||||||||| || |||||| |||| ||||||||| |||||||||||||||    
T  20448030 aaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaatt 20448097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 614 - 697
Target Start/End: Original strand, 2493076 - 2493161
Alignment:
Q  614 gagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||||||||| ||||| || |||||| |||||||| |||| || || |||||||| ||||||||| ||||||||||||||||    
T  2493076 gagtttcgttttagccaaaaaaaattgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttcttttcaattg 2493161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 697
Target Start/End: Complemental strand, 7906193 - 7906094
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| ||| ||||||||||||| ||||| ||||||||  |  ||| ||||||||||||| || ||||||||  | |||||||||||||||||||||||||    
T  7906193 ctccattttaaaatgagtgtcgctttag-caaaataaaatcatttcaaaatgaatgtcactttcagtttccggtgcaataataactttttcttttcaatt 7906095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 22220562 - 22220457
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| |||  |||||||||||  |||||  |||| || |||||| ||||| ||||||| || || ||| |||| ||||||||||||||||||||    
T  22220562 tactccctccgttttgaaatgagtgtcactttagcaaaaaaaaattgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttctttt 22220463  T
Q  692 caattg 697  Q
    ||||||    
T  22220462 caattg 22220457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 680
Target Start/End: Original strand, 33033049 - 33033120
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataa 680  Q
    |||||||| |||||||||  ||||| ||||||||||||||||||||||  || |||||||||| |||||||||    
T  33033049 aaaatgagcgtcgttttaa-caaaaaaattgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 696
Target Start/End: Complemental strand, 46392248 - 46392160
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaatt 696  Q
    |||||||||||||||||||  |||| |||| ||||||||||  |||||  |||| ||| |||  ||||||||| |||||||||||||||    
T  46392248 aaaatgagtgtcgttttagctaaaaaaattattttaaaatggctgtcactttcacttttcaaagcaataataattttttcttttcaatt 46392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 56460053 - 56460141
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| |||||| |||||||  |||| || |||||||||||||||||||  ||||| || |||| ||||| |||||||||||||| ||||    
T  56460053 aaaacgagtgttgttttaggaaaaaaaaatgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctttttaatt 56460141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 8970995 - 8971101
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgtttta--gtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttt 690  Q
    |||||||||| ||| ||||||||||| ||||||     |||| ||||||||||||||||  ||||  |||||||| ||||  |||||||| |||||||||    
T  8970995 tactccctccattttaaaatgagtgttgttttaacaaaaaaaaaattgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttcttt 8971094  T
Q  691 tcaattg 697  Q
    |||||||    
T  8971095 tcaattg 8971101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 656
Target Start/End: Original strand, 22212304 - 22212355
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    ||||||||| | ||||| ||||| ||||| ||||||||||||||||||||||    
T  22212304 tttcaaaataaatgtcgctttagccaaaaaaattgttttaaaatgaatgtca 22212355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 696
Target Start/End: Complemental strand, 27943727 - 27943644
Alignment:
Q  615 agtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactt-tttcttttcaatt 696  Q
    |||||||||||||  |||| |||||||| |||||||||||||  |||| ||| |||| |||||||||||| ||| |||||||||    
T  27943727 agtgtcgttttagcaaaaaaaattgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttcttttttttcaatt 27943644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 626
Target Start/End: Complemental strand, 29840295 - 29840260
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgtttta 626  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29840295 tagtactccctccgtttcaaaatgagtgtcgtttta 29840260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 661
Target Start/End: Complemental strand, 32141323 - 32141256
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattca 661  Q
    ||||||||||||||||||||||||||||  |||   |||| |||||||| |||||||| |||| ||||    
T  32141323 tactccctccttttcaaaatgagtgtcgcattaacaaaaaaaattgtttcaaaatgaacgtcacttca 32141256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 656
Target Start/End: Original strand, 39009385 - 39009448
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||||  |||||||||| ||||||||||| ||||| ||  |||| |||||||||||||    
T  39009385 gtactccctccgattcaaaatgattgtcgttttagccaaaaaaaaagtttcaaaatgaatgtca 39009448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 695
Target Start/End: Original strand, 40837080 - 40837186
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtca-----aaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttc 687  Q
    |||||||||| ||| ||||| |||||||||||||  |     ||| |||||||| ||||||||||||| || || |||||||| |||||||||||||||     
T  40837080 tactccctccattttaaaataagtgtcgttttagcaacaaaaaaaaaattgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt- 40837178  T
Q  688 ttttcaat 695  Q
    ||||||||    
T  40837179 ttttcaat 40837186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 696
Target Start/End: Original strand, 50623074 - 50623141
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaatt 696  Q
    |||| ||||||||||||||| |||| | ||  ||||| |||| |||||||||||||||||||||||||    
T  50623074 aaaaaaattgttttaaaatgtatgttatttttagttttcaatgcaataataactttttcttttcaatt 50623141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 656
Target Start/End: Complemental strand, 1868286 - 1868236
Alignment:
Q  606 ttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||| ||||||||||  ||||||||||| |||||||| |||||||||||||    
T  1868286 ttcataatgagtgtcactttagtcaaaaaaattgtttcaaaatgaatgtca 1868236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 599 - 656
Target Start/End: Original strand, 52732555 - 52732613
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    ||||| ||||||||||||||||  |||||| |||| || ||||||||||||||||||||    
T  52732555 cctccgtttcaaaatgagtgtcactttagttaaaaaaaattgttttaaaatgaatgtca 52732613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 653
Target Start/End: Original strand, 30105875 - 30105932
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatg 653  Q
    ||||||| |||||||||||||||||||||||   |||| |||||||| ||||||||||    
T  30105875 tccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatg 30105932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Complemental strand, 37654651 - 37654618
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  37654651 tactccctccgtttcaaaatgagtgtcgttttag 37654618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 40011040 - 40010971
Alignment:
Q  630 aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactt-tttcttttcaattg 697  Q
    |||| |||||||||||||||||||| |  ||||||||||||| |||||| ||||| ||| ||||||||||    
T  40011040 aaaaaaattgttttaaaatgaatgttactttcagtttccaatgcaataacaacttcttttttttcaattg 40010971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 631
Target Start/End: Complemental strand, 50623325 - 50623288
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaa 631  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  50623325 tactccctccgttttaaaatgagtgtcgttttagtcaa 50623288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 54711070 - 54711007
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaat--aattgttttaaaatgaatgtca 656  Q
    |||||| ||| ||||||||||| ||||||||||| ||||||  |||||||| |||||||||||||    
T  54711070 tactccatccgtttcaaaatgactgtcgttttag-caaaatgaaattgtttcaaaatgaatgtca 54711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 593 - 656
Target Start/End: Complemental strand, 31817376 - 31817312
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    ||||||||||| ||||||||||||||||   |||| ||||| || |||||| |||||||||||||    
T  31817376 gtactccctccgtttcaaaatgagtgtcacattagccaaaaaaatttgtttcaaaatgaatgtca 31817312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 594 - 626
Target Start/End: Complemental strand, 32141164 - 32141132
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgtttta 626  Q
    |||||||||| ||||||||||||||||||||||    
T  32141164 tactccctccgtttcaaaatgagtgtcgtttta 32141132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 34413713 - 34413645
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||| ||||||| || || |||| ||| ||||||||||||||| ||||||||||    
T  34413713 aaaaaaattgtttcaaaataaatgtcactttcaatttcaaatgcaataataactttttattttcaattg 34413645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 661 - 697
Target Start/End: Complemental strand, 38510379 - 38510343
Alignment:
Q  661 agtttccaatacaataataactttttcttttcaattg 697  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  38510379 agttttcaatgcaataataactttttcttttcaattg 38510343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 596 - 655
Target Start/End: Original strand, 51930553 - 51930613
Alignment:
Q  596 ctccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtc 655  Q
    |||||||| ||||||||||||||||  |||||| |||| || |||||| ||||||||||||    
T  51930553 ctccctccgtttcaaaatgagtgtcactttagttaaaaaaatttgtttcaaaatgaatgtc 51930613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 6e-33; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 39698864 - 39698760
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  39698864 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttc 39698765  T
Q  693 aattg 697  Q
    |||||    
T  39698764 aattg 39698760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 589 - 697
Target Start/End: Original strand, 39463208 - 39463318
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataacttttt 686  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||| || |||||| ||||||||||||| || ||||||||||| |||||||||||||||    
T  39463208 tttaatactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 39463307  T
Q  687 cttttcaattg 697  Q
    |||||||||||    
T  39463308 cttttcaattg 39463318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 593 - 696
Target Start/End: Complemental strand, 9880700 - 9880596
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaat-tcagtttccaatacaataataactttttctttt 691  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |  ||||||||||| ||||||||| ||||||||||    
T  9880700 gtactccctccgttttaaaatgagtgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttctttt 9880601  T
Q  692 caatt 696  Q
    |||||    
T  9880600 caatt 9880596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 592 - 697
Target Start/End: Original strand, 4989431 - 4989537
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttt 690  Q
    ||||| |||||| ||| |||||||||||||||||||| |||| |||||||| ||||||||| |||  ||||||||||||| |||||||||||||||||||    
T  4989431 agtacaccctccgttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttcttt 4989530  T
Q  691 tcaattg 697  Q
    |||||||    
T  4989531 tcaattg 4989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 15160645 - 15160540
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||| |||| ||||||||||||||||| ||||| ||||| || |||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  15160645 tactcactccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctttt 15160546  T
Q  692 caattg 697  Q
    ||||||    
T  15160545 caattg 15160540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 37559732 - 37559627
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||||||| |||||  |||| || |||||||||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  37559732 tactccatccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatcaatgtcactttcagtttccaatacaataataactttttctttt 37559633  T
Q  692 caattg 697  Q
    ||||||    
T  37559632 caattg 37559627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 43084813 - 43084721
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||||    
T  43084813 tttcaaaatgagtgtcgttttag-caaaaaaattattttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattg 43084721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 4760756 - 4760652
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||  |||| |||||||| ||| ||||| |||||||||||    
T  4760756 tactccctccgttttaaaataagtgtcgttttagccaaaaaaattgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttcttttc 4760657  T
Q  693 aattg 697  Q
    |||||    
T  4760656 aattg 4760652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 43448671 - 43448775
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| ||||||||| |||||||| |||||| |||||||| ||||||||| ||| || ||||||||||| ||||||||||||||| |||||    
T  43448671 tactccatccgttttaaaatgagtatcgttttaatcaaaaaaattgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttttttttc 43448770  T
Q  693 aattg 697  Q
    |||||    
T  43448771 aattg 43448775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 396412 - 396307
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca--attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||| ||||||||||||| |||||  ||||  |||||||||||||||||||||   ||||||||  ||| ||||||||||||||||||||    
T  396412 tactccctccattttaaaatgagtgtcgctttagcaaaaaacattgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctttt 396313  T
Q  692 caattg 697  Q
    ||||||    
T  396312 caattg 396307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 590 - 697
Target Start/End: Original strand, 17920906 - 17921015
Alignment:
Q  590 ttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttc 687  Q
    |||||| ||||||| ||| ||||||| |||||||||||  |||| || |||||||||||||||||||| || |||||| |||| ||||||||||||||||    
T  17920906 ttagtagtccctccgttttaaaatgaatgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 17921005  T
Q  688 ttttcaattg 697  Q
    ||| ||||||    
T  17921006 tttacaattg 17921015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 605 - 696
Target Start/End: Original strand, 40362400 - 40362493
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||||||| |||||  |||| || |||||||||||||||||||| || |||||| |||| |||||||||||||||||||||||||    
T  40362400 tttcaaaatgagtgtcgctttagaaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaatt 40362493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 696
Target Start/End: Original strand, 35356262 - 35356365
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||||| ||| ||||||||| ||||||| ||||| ||||| |||| ||| ||||||||| ||| || ||||||||||| ||||||||||||||||||||    
T  35356262 gtactccatccgtttcaaaattagtgtcgctttag-caaaaaaattatttcaaaatgaatatcattttcagtttccaatgcaataataactttttctttt 35356360  T
Q  692 caatt 696  Q
    |||||    
T  35356361 caatt 35356365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 9812138 - 9812232
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| |||||||||  |||| || |||||||||||||||||||| || ||||||| ||| ||||||||||||||| ||||||||||    
T  9812138 tttcaaaatgagtatcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttattttcaattg 9812232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 693
Target Start/End: Complemental strand, 39766047 - 39765957
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttca 693  Q
    ||||||||||||||||| ||||| ||||| || |||||| ||||||||||||| || |||||| |||| ||||||||||||||||||||||    
T  39766047 tttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 39765957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 588 - 696
Target Start/End: Original strand, 44713482 - 44713592
Alignment:
Q  588 ttttagtactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttt 685  Q
    ||||| |||||||||| ||| ||||||| ||| ||||||| | |||| |||||||||||||||||| ||| || || |||||||| ||||||||||||||    
T  44713482 ttttactactccctccgttttaaaatgattgttgttttaggtaaaaaaaattgttttaaaatgaatatcactttcattttccaatgcaataataactttt 44713581  T
Q  686 tcttttcaatt 696  Q
    | |||||||||    
T  44713582 ttttttcaatt 44713592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 31693820 - 31693715
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||| |||| ||| ||||| |||||||||||| || ||| |||| |||||||||||||| ||| || |||||| |||| ||||||||||||||||||||    
T  31693820 tactctctccgttttaaaataagtgtcgttttaatccaaaaaatttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttctttt 31693721  T
Q  692 caattg 697  Q
    ||||||    
T  31693720 caattg 31693715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 696
Target Start/End: Complemental strand, 6116193 - 6116100
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||| |||||||||||||||||  |||| || |||||||||||||||| ||| || | |||| |||| |||||||||||||||||||||||||    
T  6116193 tttcagaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatatcactttcggttttcaatgcaataataactttttcttttcaatt 6116100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 7839427 - 7839516
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||||||||||||||||||  |||| || |||||| ||||||||||||| || || |||||||| |||||||||| ||||||||||||||    
T  7839427 aaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttcttttcaatt 7839516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 9304832 - 9304727
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttctttt 691  Q
    ||||| |||| ||| |||||||||||||||||| | |||| || |||||| ||||||||||| | ||  |||||||||| ||||||||| ||||||||||    
T  9304832 tactctctccgttttaaaatgagtgtcgttttaattaaaaaaaattgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttctttt 9304733  T
Q  692 caattg 697  Q
    ||||||    
T  9304732 caattg 9304727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 696
Target Start/End: Complemental strand, 29025930 - 29025841
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattca-gtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||| |||||||||||| |||| || |||||| |||| |||||||| || | ||||||||| |||||||||||||||||||||||||    
T  29025930 aaaatgaatgtcgttttagttaaaaaaaattgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttcttttcaatt 29025841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 29312380 - 29312287
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||||||  |||| || |  ||||||||||||||||  ||||||||||||| ||||||||||  ||| ||||||||||    
T  29312380 tttcaaaatgagtgtcgttttagcaaaaaaaaattgtttaaaatgaatgtcattttcagtttccaatgcaataataaccgtttgttttcaattg 29312287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 514830 - 514933
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||| ||||| ||||||||||||||||||| ||  ||||| || | ||||||||||||||||| || || ||| |||| ||||||||| |||||||||||    
T  514830 tactacctccgtttcaaaatgagtgtcgttgtaa-caaaaaaaatattttaaaatgaatgtcactttcaattttcaatgcaataataattttttcttttc 514928  T
Q  693 aattg 697  Q
    |||||    
T  514929 aattg 514933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 630 - 697
Target Start/End: Original strand, 6374405 - 6374473
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||||||||||| || |||||| |||| ||||||||||||||||||||||||||    
T  6374405 aaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattg 6374473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 630 - 697
Target Start/End: Original strand, 40228565 - 40228633
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||||||||||| || |||||| |||| ||||||||||||||||||||||||||    
T  40228565 aaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattg 40228633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 14234401 - 14234312
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||  || | |||| ||| |||||||||  |||| ||||||||||    
T  14234401 aaaatgagtgtcgttttagcaaaaaaaattgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttttttttcaattg 14234312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 18673297 - 18673236
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtc 655  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||  ||||||||||||||||    
T  18673297 tactccatccgtttcaaaatgagtgtcgttttagccaaaaaaataattttaaaatgaatgtc 18673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 31899446 - 31899342
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| |||||||||||  ||||||||||  |||| || |  ||| ||||| || |||  ||||||||||||| ||||||||| |||||||||||    
T  31899446 tactccctccgtttcaaaatgacagtcgttttagctaaaaaaaattatttcaaatggatatcactttcagtttccaatgcaataataattttttcttttc 31899347  T
Q  693 aattg 697  Q
    |||||    
T  31899346 aattg 31899342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 656
Target Start/End: Complemental strand, 38329229 - 38329165
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    ||||||| ||| ||||||||||||||||  ||||||||||| || ||||||||||||||||||||    
T  38329229 gtactccttccgtttcaaaatgagtgtcactttagtcaaaaaaatttgttttaaaatgaatgtca 38329165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 609 - 656
Target Start/End: Original strand, 36915337 - 36915384
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  36915337 aaaatgagtgtcgctttagtcaaaaaaattgtttcaaaatgaatgtca 36915384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 674
Target Start/End: Original strand, 9022349 - 9022431
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaat-aattgttttaaaatgaatgtcaattca-gtttccaatacaa 674  Q
    |||||||||| ||| ||||||||| || |||||| |||||  |||||||||||||||||||||| || | |||||||||||||    
T  9022349 tactccctccgttttaaaatgagtatcattttagccaaaaagaattgttttaaaatgaatgtcactttacgtttccaatacaa 9022431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 670
Target Start/End: Original strand, 22699337 - 22699415
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaat 670  Q
    |||||||||| ||||||||||| ||||||||||  | ||||||||||||| |||||| ||||||  |||||||||||||    
T  22699337 tactccctccgtttcaaaatgaatgtcgttttaaccaaaaataattgtttcaaaatgcatgtcaccttcagtttccaat 22699415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 35052425 - 35052487
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtc 655  Q
    |||||||||| ||||||||||||||||| |||||   |||| |||||||||||||||||||||    
T  35052425 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtc 35052487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 686
Target Start/End: Original strand, 43724347 - 43724429
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttttt 686  Q
    |||||||||||| |||| |||||  |||| |||||||| ||||||||| |||  ||||||||||||| ||||||||| |||||    
T  43724347 tttcaaaatgagcgtcgctttagctaaaaaaattgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttt 43724429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 659 - 697
Target Start/End: Complemental strand, 44342918 - 44342880
Alignment:
Q  659 tcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  44342918 tcagtttccaatataataataactttttcttttcaattg 44342880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 45359078 - 45358988
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||| |||||||| |||||| |||| |||| ||||||| ||||| || || ||| |||| ||||||||| ||||||||||||||||    
T  45359078 aaaatgagtttcgttttaatcaaaaaaatttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttcttttcaattg 45358988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 5588659 - 5588606
Alignment:
Q  606 ttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt 659  Q
    |||||||||| |||||| |||| ||||| |||||||||||| ||||||||||||    
T  5588659 ttcaaaatgaatgtcgtattagccaaaaaaattgttttaaactgaatgtcaatt 5588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 696
Target Start/End: Complemental strand, 43974939 - 43974886
Alignment:
Q  644 aaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||| ||  |||||||||| |||||||||||||||||||||||||    
T  43974939 aaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaatt 43974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 612 - 656
Target Start/End: Original strand, 21200966 - 21201010
Alignment:
Q  612 atgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||    
T  21200966 atgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtca 21201010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 697
Target Start/End: Complemental strand, 34796872 - 34796772
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaat-aattgttttaaaatgaatgt-caattcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||| ||| ||||||||| | |||||||| ||||  |||||||| ||||||||||| |  || |||||| ||| ||||||||| |||||||||||||||    
T  34796872 cctccgttttaaaatgagtattgttttagttaaaaagaattgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttcttttcaatt 34796773  T
Q  697 g 697  Q
    |    
T  34796772 g 34796772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 638 - 697
Target Start/End: Original strand, 40400441 - 40400501
Alignment:
Q  638 tgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||| ||  |||||| |||| |||||||| ||||||||||||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttcttttcaattg 40400501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 655
Target Start/End: Original strand, 8471234 - 8471297
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtc 655  Q
    ||||||||||| |||||||||||||| || ||||| | |||| |||||||| ||||||||||||    
T  8471234 gtactccctccgtttcaaaatgagtgccgctttagccaaaaaaaattgtttcaaaatgaatgtc 8471297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 632
Target Start/End: Complemental strand, 34168406 - 34168367
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaa 632  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  34168406 gtactccctccgtttcaaaatgagtgtcgttttagccaaa 34168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 1774258 - 1774192
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt 659  Q
    |||||| ||| ||| ||||||||||||  ||||| ||||| || |||||||||||||||||||||||    
T  1774258 tactccttccgttttaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgaatgtcaatt 1774192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 697
Target Start/End: Original strand, 19438257 - 19438295
Alignment:
Q  659 tcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  19438257 tcagtttccaatgtaataataactttttcttttcaattg 19438295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 696
Target Start/End: Original strand, 41679339 - 41679377
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaatt 696  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  41679339 ttcagttttcaatacaataataactttttctttttaatt 41679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 13368147 - 13368042
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaat-tcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||| ||||||||||| ||||||  ||||| || |||||| ||||||  | ||| | ||| |||||||  |||||||||| |||||||||    
T  13368147 tactccctccgttttaaaatgagtgttgttttaaccaaaaaaaattgtttcaaaatgggtatcattatcaatttccaacgcaataataacattttctttt 13368048  T
Q  692 caattg 697  Q
    ||||||    
T  13368047 caattg 13368042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 656
Target Start/End: Complemental strand, 15750494 - 15750437
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||| ||||||||||||||||||||||  | |||| ||||||||||| ||||||||||    
T  15750494 ctccctttcaaaatgagtgtcgttttaaccaaaaaaaattgttttaagatgaatgtca 15750437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 39765783 - 39765816
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  39765783 tactccctccgtttcaaaatgagtgtcgttttag 39765816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 609 - 656
Target Start/End: Complemental strand, 5790876 - 5790828
Alignment:
Q  609 aaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca 656  Q
    ||||| ||||||||||||| | |||| ||||||||||||||||||||||    
T  5790876 aaaataagtgtcgttttagataaaaaaaattgttttaaaatgaatgtca 5790828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 694
Target Start/End: Original strand, 17655927 - 17655963
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaa 694  Q
    |||||||| |||| |||||||||||||||||||||||    
T  17655927 ttcagttttcaatgcaataataactttttcttttcaa 17655963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 591 - 627
Target Start/End: Complemental strand, 39463501 - 39463465
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttag 627  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  39463501 tagtactccctccgtttcaaaatgagtgtcgctttag 39463465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 3703 - 3598
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||||||||||||||||||||||||| | ||||| ||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  3703 tactccctccttttcaaaatgagtgtcgtttttgccaaaaataattttttcaaaatgaatgtcactttcagtttccaatacaataataactttttctttt 3604  T
Q  692 caattg 697  Q
    ||||||    
T  3603 caattg 3598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 5e-30; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 594 - 696
Target Start/End: Complemental strand, 38531493 - 38531390
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  38531493 tactccctccgtttcaaaatgagcgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttc 38531394  T
Q  693 aatt 696  Q
    ||||    
T  38531393 aatt 38531390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 32807135 - 32807030
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||||||||||||||||||||||| | |||| |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  32807135 tactccctccgtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctttt 32807036  T
Q  692 caattg 697  Q
    ||||||    
T  32807035 caattg 32807030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 24483343 - 24483447
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| |||||||||||||||||||  |||| |||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||    
T  24483343 tactccatccattttaaaatgagtgtcgttttagaaaaaaaaattgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttcttttc 24483442  T
Q  693 aattg 697  Q
    |||||    
T  24483443 aattg 24483447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 591 - 696
Target Start/End: Original strand, 26755171 - 26755278
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttct 688  Q
    ||||||||  ||| ||||||||||||||||||||||| ||||| || |||||| ||||||||||||| || |||||||||||||| ||||||||||||||    
T  26755171 tagtactctatccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttct 26755270  T
Q  689 tttcaatt 696  Q
    ||||||||    
T  26755271 tttcaatt 26755278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 44108552 - 44108658
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||||| ||||||||||||| | |||||||| |||| ||  |||||||||||| ||||||| || |||||||||||||||||||||||||||||||    
T  44108552 tactccctccatttcaaaatgagtattgttttagtaaaaaaaaaattgttttaaaataaatgtcactttcagtttccaatacaataataactttttcttt 44108651  T
Q  691 tcaattg 697  Q
    |||||||    
T  44108652 tcaattg 44108658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 15823003 - 15823093
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  15823003 aaaatgagagtcgttttagtcaaaagaatttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 15823093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 589 - 697
Target Start/End: Original strand, 29567845 - 29567955
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataacttttt 686  Q
    |||| |||||||||| ||||||||| |||||||||||||  |||| || |||||| ||||||||||||| || ||||||||||| |||||||||||||||    
T  29567845 tttattactccctccgtttcaaaattagtgtcgttttagcaaaaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 29567944  T
Q  687 cttttcaattg 697  Q
    |||||||||||    
T  29567945 cttttcaattg 29567955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 5463530 - 5463634
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||||| |||||||||||  |||  |||||||| |||||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  5463530 tactccctccgtttcaaaatgaatgtcgttttagcaaaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttcttttc 5463629  T
Q  693 aattg 697  Q
    |||||    
T  5463630 aattg 5463634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 605 - 696
Target Start/End: Original strand, 31798555 - 31798647
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||| ||||||||||||||| ||||| |||||||| |||||||| |||| || |||||||| ||||||||||||||||||||||||||||    
T  31798555 tttcaaagtgagtgtcgttttagccaaaaaaattgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttcttttcaatt 31798647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 46554754 - 46554857
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaa-ttcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| ||||||||||||||||||  ||||| ||||||||||||||||||||||  ||||||||||| | ||||||||||||||| |||||    
T  46554754 tactccctccgttttaaaatgagtgtcgttttaaccaaaa-aattgttttaaaatgaatgtcaccttcagtttccactgcaataataactttttattttc 46554852  T
Q  693 aattg 697  Q
    |||||    
T  46554853 aattg 46554857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 50249264 - 50249369
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||  ||| ||||||||||||| ||||| ||||| |||| |||| ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  50249264 tactccctctgttttaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctttt 50249363  T
Q  692 caattg 697  Q
    ||||||    
T  50249364 caattg 50249369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 16757390 - 16757286
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| | ||||| ||||||||||||||| ||||| | |||||| |||||| |||||| || ||||||||||| |||||||||||| ||||||||    
T  16757390 tactccctccgtatcaaagtgagtgtcgttttagccaaaaaagttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattcttttc 16757291  T
Q  693 aattg 697  Q
    |||||    
T  16757290 aattg 16757286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 25487043 - 25487147
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||| || |||| ||||| ||||| || | ||||||||||||||||| || |||||| |||| |||||||||||||||||||||    
T  25487043 tactccctccgtttcaaaattagcgtcgctttagccaaaaaaactattttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc 25487142  T
Q  693 aattg 697  Q
    |||||    
T  25487143 aattg 25487147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 27720913 - 27721017
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||||||||||||| ||||| ||||| | || ||| ||||||||||||| || |||||| ||||| ||||||||||||||||||||    
T  27720913 tactccatccgtttcaaaatgagtgtcgctttagccaaaaaatttatttaaaaatgaatgtcactttcagttttcaatataataataactttttcttttc 27721012  T
Q  693 aattg 697  Q
    |||||    
T  27721013 aattg 27721017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 591 - 697
Target Start/End: Complemental strand, 44258709 - 44258599
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttag---tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttttt 686  Q
    ||||||||||| | ||||||||||||||||| |||||     |||| ||||||||||||||||||||||  ||||||||||||| ||||||||| |||||    
T  44258709 tagtactcccttcgtttcaaaatgagtgtcgctttagcaaaaaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaataataatttttt 44258610  T
Q  687 cttttcaattg 697  Q
    |||||||||||    
T  44258609 cttttcaattg 44258599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 594 - 696
Target Start/End: Original strand, 46045928 - 46046031
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    ||||||| || ||| |||||||||||||||||||| |||| |||||||| |||||||||||||  |||||||| | || ||||||||||||||| |||||    
T  46045928 tactccccccgttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatgtcactttcagttttcgatgcaataataactttttattttc 46046027  T
Q  693 aatt 696  Q
    ||||    
T  46046028 aatt 46046031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 589 - 697
Target Start/End: Original strand, 9915392 - 9915502
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataacttttt 686  Q
    |||| |||||| ||| || |||||||||||||||||||  || || |||| |||||||||||||||||| || ||||||||||| ||||||||| |||||    
T  9915392 tttattactccatccgttacaaaatgagtgtcgttttaaccataaaaatttgttttaaaatgaatgtcattttcagtttccaatgcaataataaattttt 9915491  T
Q  687 cttttcaattg 697  Q
    |||||||||||    
T  9915492 cttttcaattg 9915502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 12591264 - 12591174
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||   |||||||||||||||| |||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  12591264 aaaatgagtgttactttagtcaaaataatttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattg 12591174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 594 - 693
Target Start/End: Complemental strand, 18794739 - 18794638
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataat--tgttttaaaatgaatgtcaattcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||| ||||||| |||||||||||  |||| |||  ||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  18794739 tactccctccgttttaaaatgattgtcgttttagcaaaaaaaatattgttttaaaataaatgtcatttcagtttcgaatgcaataataactttttctttt 18794640  T
Q  692 ca 693  Q
    ||    
T  18794639 ca 18794638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 10842750 - 10842839
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||| ||||| |||| ||| |||||||||||||  |||||||| |||| |||||||||| |||||||||||||||    
T  10842750 aaaatgagtgtcgttttagccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataacattttcttttcaattg 10842839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 34032277 - 34032172
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||||||||  |||||||||||||||| |||||  |||| || |||||| ||||||||||||| || ||||||||||| ||||||||| ||||||||||    
T  34032277 tactccctccgcttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctttt 34032178  T
Q  692 caattg 697  Q
    ||||||    
T  34032177 caattg 34032172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 48025451 - 48025346
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||| |||||||||||||||||||  |||| || |||||| ||||||||||||| || | ||||||||| |||||||||||||||| |||    
T  48025451 tactccctccgttttaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcgttt 48025352  T
Q  692 caattg 697  Q
    ||||||    
T  48025351 caattg 48025346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 44557240 - 44557136
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| ||||||||| ||| |||||| |||| | ||||||||||||||||||||  |||||| |||||| |||||||||| ||||||||||    
T  44557240 tactccatccgttttaaaatgagtttcgctttagtaaaaaaatttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttcttttc 44557141  T
Q  693 aattg 697  Q
    |||||    
T  44557140 aattg 44557136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 34047433 - 34047327
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttt 690  Q
    |||||| ||| ||| |||||||||||||||||||  |||| ||  |||||| ||||||||||||| ||  |||||||||| |||||||||||||||||||    
T  34047433 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttt 34047334  T
Q  691 tcaattg 697  Q
    |||||||    
T  34047333 tcaattg 34047327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 591 - 697
Target Start/End: Complemental strand, 52024433 - 52024326
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctt 689  Q
    ||||| ||| ||| |||||||| || ||||||||||||||||| |||||||| ||||| ||||| |  |||||||| |||| ||||||||| ||||||||    
T  52024433 tagtattccttccgtttcaaaaagaatgtcgttttagtcaaaaaaattgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttctt 52024334  T
Q  690 ttcaattg 697  Q
    ||||||||    
T  52024333 ttcaattg 52024326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 696
Target Start/End: Complemental strand, 14373607 - 14373506
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaa 694  Q
    ||||||| ||| ||||||||||||| ||||| | |||| |||| ||||||||||||||||| || ||||||||||| ||| ||||||||||| |||||||    
T  14373607 tccctccgttttaaaatgagtgtcgctttagctaaaaaaaattattttaaaatgaatgtcattttcagtttccaatgcaacaataactttttattttcaa 14373508  T
Q  695 tt 696  Q
    ||    
T  14373507 tt 14373506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 25151770 - 25151874
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagt-caaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| |||||||||||||| |||||||||  |||| |||||| || ||||||||||||  ||| ||||||||| |||||||||| |||||||||    
T  25151770 tactccctccgtttcaaaatgagtgacgttttagtaaaaaaaaattgtatt-aaatgaatgtcactttcggtttccaatgcaataataacattttctttt 25151868  T
Q  692 caattg 697  Q
    ||||||    
T  25151869 caattg 25151874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 610 - 697
Target Start/End: Complemental strand, 26352262 - 26352173
Alignment:
Q  610 aaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||| ||||| |||||||||| |||| ||||||||||||| ||  ||||| |||| ||||||||||||||||||||||||||    
T  26352262 aaatgagtgtcgctttagccaaaataatttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattg 26352173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 31491967 - 31491862
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||||||||| ||||||||||||| | |||| |||||||| |||||||||||||  |||| ||| ||||   ||||||||||||||||||    
T  31491967 tactccctccgtttcaaaatcagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttctttt 31491868  T
Q  692 caattg 697  Q
    ||||||    
T  31491867 caattg 31491862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 1740828 - 1740733
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||  |||||||||||||| |||| ||  |||||||||||||||||||| || |||||||||||  |||||||||||||| ||||||||||    
T  1740828 tttcaaaacaagtgtcgttttagtaaaaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgaaataataactttttattttcaattg 1740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 2611026 - 2610922
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| |||||||||||||||||||  |||| ||||||||| ||||||||   | || |||||| |||||||||||||| |||||||||||    
T  2611026 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaaattgttttgaaatgaatacgactttcagttttcaatacaataataattttttcttttc 2610927  T
Q  693 aattg 697  Q
    |||||    
T  2610926 aattg 2610922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 49468897 - 49468803
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||| ||||||||| | |||| || |||||| ||||||||||| | || ||||||||||| |||||||||| |||||||||||||||    
T  49468897 tttcaaaatgagcgtcgttttaataaaaaaaaattgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttcttttcaattg 49468803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 13408462 - 13408357
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||| | ||| ||||||||||||||||||   |||| || |||||||||||||||| | | || |||||| |||| ||||||||||||||||||||    
T  13408462 tactcccttcgttttaaaatgagtgtcgttttaccaaaaacaaattgttttaaaatgaattttactttcagttttcaatgcaataataactttttctttt 13408363  T
Q  692 caattg 697  Q
    ||||||    
T  13408362 caattg 13408357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 593 - 697
Target Start/End: Complemental strand, 24611717 - 24611612
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||||||||| |||||||| |||||| ||||||| ||||| || |  || |||||||||||||  || |||||| |||  |||||||||||||||||||    
T  24611717 gtactccctccatttcaaaaagagtgttgttttagccaaaaaaaattgttcaaaatgaatgtcacttttagtttctaatgtaataataactttttctttt 24611618  T
Q  692 caattg 697  Q
    ||||||    
T  24611617 caattg 24611612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 27208959 - 27209048
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||| |||||| || || ||||||||  |||||||||||| || | ||||||||| ||||||||||||||| ||||||||||    
T  27208959 aaaatgagtgtcattttagccagaaaaattgtttcgaaatgaatgtcactttcggtttccaatgcaataataactttttattttcaattg 27209048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 592 - 686
Target Start/End: Original strand, 15573557 - 15573655
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtc---aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttttt 686  Q
    ||||||| |||| |||||||||||| |||||||||| |   |||| |||||||| |||||||||||||  |||||||| |||| |||||||||||||||    
T  15573557 agtactcactccgtttcaaaatgagcgtcgttttagcccaaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 615 - 697
Target Start/End: Complemental strand, 35848111 - 35848025
Alignment:
Q  615 agtgtcgttttagtcaaaataa---ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||| ||   |||||| ||| ||||||||| || |||||| |||| ||||||||||||||||||||||||||    
T  35848111 agtgtcgttttagtcaaaaaaaaaattgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttcttttcaattg 35848025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 594 - 694
Target Start/End: Complemental strand, 49426609 - 49426510
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttca 693  Q
    |||| ||||| ||||||||||| |||||||||||  |||| || ||||| ||||| |||||| | ||||||| |||| ||||||||| ||||||||||||    
T  49426609 tacttcctccgtttcaaaatgaatgtcgttttagcaaaaaaaaatgtttcaaaataaatgtc-actcagttttcaatgcaataataattttttcttttca 49426511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 12002200 - 12002263
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||| ||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  12002200 tactccctccgttttaaaatgagtgtcgttttagctaaaaaaaattgttttaaaatgaatgtca 12002263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 593 - 656
Target Start/End: Complemental strand, 38132366 - 38132303
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||| |||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  38132366 gtacaccctccatttcaaaatgagtgtcgctttagccaaaaaaattgtttcaaaatgaatgtca 38132303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 2458962 - 2459024
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtc 655  Q
    |||||||||| ||||||||||||||||||||||| ||||| || |||||| ||||||||||||    
T  2458962 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaatttgtttcaaaatgaatgtc 2459024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 28200423 - 28200361
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtc 655  Q
    |||||||||| ||| ||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  28200423 tactccctccgttttaaaatgagtgtcgttttagtcaaaaaaaattgtttcaaaatgaatgtc 28200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 697
Target Start/End: Original strand, 50094234 - 50094288
Alignment:
Q  644 aaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  50094234 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 50094288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 599 - 694
Target Start/End: Original strand, 30292899 - 30292996
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaa 694  Q
    ||||| ||| |||||||||||||||| |  ||||| || ||||||||||||||||| || || ||||||||||| ||||||||||||| | |||||||    
T  30292899 cctccgttttaaaatgagtgtcgtttcaaccaaaaaaaattgttttaaaatgaatgccactttcagtttccaatgcaataataactttgttttttcaa 30292996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 694
Target Start/End: Complemental strand, 12484819 - 12484723
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaa 694  Q
    |||| ||| ||||||||||||  |||||| |||| || |||||| ||||||||| ||| || || || |||||||||||||||||||||||||||||    
T  12484819 ctccgttttaaaatgagtgtcactttagtaaaaacaaattgtttcaaaatgaatttcattttcatttgccaatacaataataactttttcttttcaa 12484723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 697
Target Start/End: Complemental strand, 26595221 - 26595161
Alignment:
Q  638 tgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||| || |||||| |||| ||||||||| ||||||||||||||||    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttcttttcaattg 26595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 674
Target Start/End: Original strand, 43929638 - 43929721
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag--tcaaaataattgttttaaaatgaatgtcaa-ttcagtttccaatacaa 674  Q
    |||||||||| ||||||||||||||||  |||||    |||| |||||||| |||||||||||||| |||||||||||||||||    
T  43929638 tactccctccgtttcaaaatgagtgtcactttagcaaaaaaaaaattgtttcaaaatgaatgtcaatttcagtttccaatacaa 43929721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 52125319 - 52125228
Alignment:
Q  609 aaaatgagtgtcgttttag--tcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||| ||||||||||  | |||| ||||||||  ||||||||||||||| ||||||||||| ||||||||| ||||| || |||||||    
T  52125319 aaaatgagcgtcgttttagcttaaaaaaaattgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattctcaattg 52125228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 697
Target Start/End: Complemental strand, 49403002 - 49402963
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  49403002 ttcagtttccaatgcaataataactttttcttttcaattg 49402963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 696
Target Start/End: Original strand, 24884366 - 24884473
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa----ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttct 688  Q
    |||||||||| ||| ||||||| |||||||||||  |||| ||    || ||||||||| ||||||| || || |||||||| ||||||||||||||| |    
T  24884366 tactccctccgttttaaaatgaatgtcgttttagcaaaaaaaaaaaattattttaaaataaatgtcactttcaatttccaatgcaataataactttttat 24884465  T
Q  689 tttcaatt 696  Q
    ||||||||    
T  24884466 tttcaatt 24884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 49900939 - 49900849
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaa-tacaataataactttttcttttcaattg 697  Q
    ||||| ||||||||||||| |  || || ||||||||||| ||||||| || |||||| ||| ||||||||||||||||| ||||||||||    
T  49900939 aaaattagtgtcgttttagcctcaaaaaatgttttaaaataaatgtcactttcagttttcaaatacaataataactttttattttcaattg 49900849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 697
Target Start/End: Complemental strand, 14593465 - 14593412
Alignment:
Q  645 aaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||| || ||||||||||| ||||||||| ||||||||||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattg 14593412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 46287019 - 46286910
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-----ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttc 687  Q
    |||||||||  ||| |||||||||||||||||||| |||| ||     || | |||||| |||||||| || || ||| |||| ||||||||||||||||    
T  46287019 tactccctctgttttaaaatgagtgtcgttttagtaaaaaaaaaattattttattaaaaagaatgtcactttcatttttcaatgcaataataactttttc 46286920  T
Q  688 ttttcaattg 697  Q
    ||||||||||    
T  46286919 ttttcaattg 46286910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 630 - 697
Target Start/End: Original strand, 48009001 - 48009069
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||||||||||||||||||| || ||  |||||  ||| ||||||||||||||||||||||||||    
T  48009001 aaaaaaattgttttaaaatgaatggcatttttagtttttaatgcaataataactttttcttttcaattg 48009069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 656
Target Start/End: Complemental strand, 50158506 - 50158442
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||||| ||| ||||||||||||  | ||||||||| |||| ||| |||||||||||||    
T  50158506 agtactccctccgttttaaaatgagtgtcactgtagtcaaaaaaattatttcaaaatgaatgtca 50158442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 633
Target Start/End: Original strand, 7375243 - 7375282
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaa 633  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  7375243 tactccctccgtttcaaaatgagtgtcgttttagccaaaa 7375282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 697
Target Start/End: Original strand, 11799437 - 11799520
Alignment:
Q  615 agtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    |||||| ||||||  ||||  |||||| |||||||||||||| ||| ||||| |||||||||| ||| |||||||||| |||||    
T  11799437 agtgtcattttagctaaaaatattgttctaaaatgaatgtcatttcaagttttcaatacaatagtaagtttttctttttaattg 11799520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 656
Target Start/End: Original strand, 30685476 - 30685543
Alignment:
Q  590 ttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    |||||||||||||  ||||||||||||||||  |||||  ||||||| |||||| |||||||||||||    
T  30685476 ttagtactccctctgtttcaaaatgagtgtcactttagcaaaaataatttgtttcaaaatgaatgtca 30685543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 697
Target Start/End: Original strand, 34110547 - 34110586
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  34110547 ttcagtttccaatgcaataataactttttctttttaattg 34110586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 627
Target Start/End: Original strand, 48259769 - 48259808
Alignment:
Q  588 ttttagtactccctccttttcaaaatgagtgtcgttttag 627  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  48259769 ttttattactccctccgtttcaaaatgagtgtcgttttag 48259808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 656
Target Start/End: Complemental strand, 672464 - 672402
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtca 656  Q
    ||||||||| ||| ||||||||||||  ||||| ||||| |||| ||||||||||||||||||    
T  672464 actccctccgttttaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtca 672402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 696
Target Start/End: Complemental strand, 25561003 - 25560965
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  25561003 ttcagtttccaatgcaataataattttttcttttcaatt 25560965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 697
Target Start/End: Complemental strand, 43358397 - 43358292
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttag--tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||||||| ||| |||||||||||||||||||    |||| |||||||| || |||||| |||  |||| ||| |||| |||||||||| |||| ||||    
T  43358397 actccctccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaatatgaatatcactttcacttttcaatgcaataataacattttatttt 43358298  T
Q  692 caattg 697  Q
    ||||||    
T  43358297 caattg 43358292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 597 - 631
Target Start/End: Original strand, 46286731 - 46286765
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttagtcaa 631  Q
    |||||||||||||||||||||||||||||| ||||    
T  46286731 tccctccttttcaaaatgagtgtcgttttaatcaa 46286765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 667 - 697
Target Start/End: Complemental strand, 51244959 - 51244929
Alignment:
Q  667 caatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||||||||||||||    
T  51244959 caatacaataataactttttcttttcaattg 51244929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Complemental strand, 9915685 - 9915652
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  9915685 tactccctccgtttcaaaatgagtgtcgttttag 9915652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 631
Target Start/End: Complemental strand, 10843021 - 10842984
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaa 631  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  10843021 tactccatccgtttcaaaatgagtgtcgttttagtcaa 10842984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 11134372 - 11134405
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  11134372 tactccctccatttcaaaatgagtgtcgttttag 11134405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 627
Target Start/End: Complemental strand, 11134665 - 11134628
Alignment:
Q  590 ttagtactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||||||  |||||||||||||||||||||||    
T  11134665 ttagtactccctctgtttcaaaatgagtgtcgttttag 11134628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 696
Target Start/End: Original strand, 41857304 - 41857372
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt--cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| ||||||||||||||||| |||| ||  || |||||||||||||||||| ||||  |||||||||    
T  41857304 aaaaaaattgttttaaaatgaacgtcatttttcattttccaatacaataataatttttctttttcaatt 41857372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 33622525 - 33622457
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||| ||||||||||||||||| ||  | ||| |||| ||||||||||||| ||||||||||||    
T  33622525 aaaaaaattattttaaaatgaatgtcattttcgattttcaatgcaataataactttatcttttcaattg 33622457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 39477889 - 39477800
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||| ||||||  || | |||||||| ||||||||| ||||| ||||||||||    
T  39477889 aaaatgagtgttgttttag-caaaataaaattgttttaaaatggatgtcacttttaatttccaatgcaataataa-ttttttttttcaattg 39477800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 599 - 631
Target Start/End: Complemental strand, 48009246 - 48009214
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaa 631  Q
    ||||| |||||||||||||||||||||||||||    
T  48009246 cctccgtttcaaaatgagtgtcgttttagtcaa 48009214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 587 - 619
Target Start/End: Original strand, 50349762 - 50349794
Alignment:
Q  587 tttttagtactccctccttttcaaaatgagtgt 619  Q
    ||||||||||||||||| |||||||||||||||    
T  50349762 tttttagtactccctccgtttcaaaatgagtgt 50349794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 8e-29; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 7580052 - 7579963
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  7580052 aaaacgagtgtcgttttagtcaaaataattgttttaaaatgaatgttactttcagttttcaatacaataataactttttcttttcaattg 7579963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 3306207 - 3306103
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| |||||||||||| |||||||||||| |||| |||||||||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  3306207 tactccctccgttttaaaatgagtgtcattttagtcaaaaaaattattttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttc 3306108  T
Q  693 aattg 697  Q
    |||||    
T  3306107 aattg 3306103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 589 - 697
Target Start/End: Original strand, 39566132 - 39566242
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataacttttt 686  Q
    ||||||||||| ||| ||| ||||||||||||||||||| | ||| |||| |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  39566132 tttagtactccatccattttaaaatgagtgtcgttttagcccaaaaaatttgttttaaaatgaatgtcactttcagtttccaatgcaataataacttttt 39566231  T
Q  687 cttttcaattg 697  Q
    |||||||||||    
T  39566232 cttttcaattg 39566242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 594 - 696
Target Start/End: Complemental strand, 42104263 - 42104158
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||  |||||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  42104263 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttt 42104164  T
Q  691 tcaatt 696  Q
    ||||||    
T  42104163 tcaatt 42104158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 10345132 - 10345026
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||||| ||||||||||||||||| ||||| ||||| ||  |||||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  10345132 tactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttt 10345033  T
Q  691 tcaattg 697  Q
    |||||||    
T  10345032 tcaattg 10345026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 2729985 - 2729880
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||||||||||||||||||||||  ||||| || |||||| ||||||||||||| || || |||||||| ||||||||||||||||||||    
T  2729985 tactccctccgtttcaaaatgagtgtcgttttaaccaaaaaaacttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttctttt 2729886  T
Q  692 caattg 697  Q
    ||||||    
T  2729885 caattg 2729880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 595 - 697
Target Start/End: Complemental strand, 14620692 - 14620588
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    ||||| ||| ||||||||||||||||||||||| ||||| || || ||| ||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  14620692 actccatccgtttcaaaatgagtgtcgttttagccaaaaaaaattatttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttc 14620593  T
Q  693 aattg 697  Q
    |||||    
T  14620592 aattg 14620588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 21319498 - 21319404
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| ||||||||||||||| |||| |||| ||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||    
T  21319498 tttcaaaatgagtatcgttttagtcaaaaaaatttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttcttttcaattg 21319404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 39504676 - 39504782
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaa-taataactttttcttt 690  Q
    |||||||||| ||||||||| | ||||||||||| | |||| ||||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||    
T  39504676 tactccctccatttcaaaataaatgtcgttttagttaaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttcttt 39504775  T
Q  691 tcaattg 697  Q
    |||||||    
T  39504776 tcaattg 39504782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 27797747 - 27797840
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||| |||||||| ||  |||| |||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  27797747 tttcaaaatgattgtcgtttgagctaaaaaaattattttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 27797840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 36164858 - 36164945
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||    
T  36164858 aaaatgagtgtcgttttagccaaaa-aattattttaaaatgaatgtcattttcagtttccaatgcagtaataactttttcttttcaatt 36164945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 697
Target Start/End: Original strand, 24280950 - 24281052
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttca 693  Q
    ||||| ||| ||||||||||| |||||||||||| |||| |||||||| ||||||||||||| ||  |||||||||| ||||||||| ||||||||||||    
T  24280950 actccatccatttcaaaatgaatgtcgttttagtaaaaa-aattgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttca 24281048  T
Q  694 attg 697  Q
    ||||    
T  24281049 attg 24281052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 697
Target Start/End: Complemental strand, 24381262 - 24381160
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttca 693  Q
    ||||| ||| ||||||||||| |||||||||||| |||| |||||||| ||||||||||||| ||  |||||||||| ||||||||| ||||||||||||    
T  24381262 actccatccatttcaaaatgaatgtcgttttagtaaaaa-aattgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttca 24381164  T
Q  694 attg 697  Q
    ||||    
T  24381163 attg 24381160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 597 - 697
Target Start/End: Original strand, 7316985 - 7317087
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaa 694  Q
    ||||||| ||| ||||||||||||| |||||  |||| || |||||| ||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  7316985 tccctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaa 7317084  T
Q  695 ttg 697  Q
    |||    
T  7317085 ttg 7317087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 3025130 - 3025025
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||| ||||||| ||||| | |||| |||||||| ||||||||||||| ||  |||||||||| ||||||||||||||||||||    
T  3025130 tactccatccgtttcaaaataagtgtcgctttagctaaaaaaaattgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctttt 3025031  T
Q  692 caattg 697  Q
    ||||||    
T  3025030 caattg 3025025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 4630820 - 4630924
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataat-tgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||||||||||||||||||||  |||| ||||| ||||| ||| | ||||||||| ||||||| || |||||| |||||||||||||||||||||||||    
T  4630820 tactccctccttttcaaaatgaccgtcgctttag-caaaaaaatattttttaaaataaatgtcactttcagttttcaatacaataataactttttctttt 4630918  T
Q  692 caattg 697  Q
    ||||||    
T  4630919 caattg 4630924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 21195333 - 21195438
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtcaattca-gtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||||||||||| ||||||| || || ||| ||||||| |||||||| | ||||||||| ||||||||| ||||||||||    
T  21195333 tactccgtccgtttcaaaatgagtgtcgttttggtcaaaaatatttatttcaaaatgattgtcaatttaagtttccaatgcaataataattttttctttt 21195432  T
Q  692 caattg 697  Q
    ||||||    
T  21195433 caattg 21195438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 38369827 - 38369931
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| ||||||| |||||||||||| |||| || |||||||||||||||| ||| ||   |||||||| ||||||||||||||||||||     
T  38369827 tactccctccgttttaaaatgaatgtcgttttagtaaaaaaaaattgttttaaaatgaatatcacttttatttccaatgcaataataactttttctttta 38369926  T
Q  693 aattg 697  Q
    |||||    
T  38369927 aattg 38369931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 34446226 - 34446121
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||||| ||||||| |||||||||||||||  |||| ||  |||||| ||||||||||||| || |||||| ||||||||||||||| ||||||||    
T  34446226 tactccctccgtttcaaa-tgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttcttt 34446128  T
Q  691 tcaattg 697  Q
    |||||||    
T  34446127 tcaattg 34446121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 21375849 - 21375745
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||  |||||||| |||| ||| |||   ||||| |||||    
T  21375849 tactccttccgtttcaaaatgagtgtcgttttagccaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaaaaattttttttttttttc 21375750  T
Q  693 aattg 697  Q
    |||||    
T  21375749 aattg 21375745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 693
Target Start/End: Complemental strand, 9066623 - 9066521
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaa-aataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttt 690  Q
    ||||||||||| ||||||||| | ||||||||||||||| || |||||||| ||||||||||| |  |||||||| |||| |||||||||  ||||||||    
T  9066623 gtactccctccatttcaaaataaatgtcgttttagtcaagaaaaattgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttcttt 9066524  T
Q  691 tca 693  Q
    |||    
T  9066523 tca 9066521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 697
Target Start/End: Original strand, 26660706 - 26660814
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttag---tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttct 688  Q
    ||||| ||||| ||| ||||||||||| |||||||     |||| ||||||||||||||||||||||  |||| ||| |||| |||||||||||||||||    
T  26660706 gtacttcctccgttttaaaatgagtgttgttttagcaacaaaaaaaattgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttct 26660805  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  26660806 tttcaattg 26660814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 697
Target Start/End: Original strand, 26932299 - 26932407
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttag---tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttct 688  Q
    ||||| ||||| ||| ||||||||||| |||||||     |||| ||||||||||||||||||||||  |||| ||| |||| |||||||||||||||||    
T  26932299 gtacttcctccgttttaaaatgagtgttgttttagcaacaaaaaaaattgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttct 26932398  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  26932399 tttcaattg 26932407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 4011836 - 4011771
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||||||||||||||||||||||  |||||  |||| ||||||||||||||||| ||||    
T  4011836 tagtactccctccttttcaaaatgagtgtcactttagctaaaaaaattgttttaaaatgaacgtca 4011771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 697
Target Start/End: Original strand, 7721054 - 7721154
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattca-gtttccaatacaataataactttttcttttcaat 695  Q
    ||||||| ||| |||||||||||||||||| | |||| |||||||| ||||||||| ||| || | |||| |||| ||||||||||||||| ||||||||    
T  7721054 tccctccattttaaaatgagtgtcgttttaattaaaaaaattgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttt-ttttcaat 7721152  T
Q  696 tg 697  Q
    ||    
T  7721153 tg 7721154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 13761528 - 13761616
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||||||||||||| |||||| |||||||| ||||||||||||| || || ||| |||| ||||||||| ||||||||||||||||    
T  13761528 aaaacgagtgtcgttttaatcaaaa-aattgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttcttttcaattg 13761616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 696
Target Start/End: Original strand, 39729924 - 39730017
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataat-tgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||| |||||||||||  |||| ||| | ||| ||||||||||| | || ||||||||||| |||||||||||||||||||||||||    
T  39729924 tttcaaaatgaatgtcgttttagcaaaaaaaatatatttcaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaatt 39730017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 6518944 - 6519035
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||  |||| ||  |||||| ||||||||||||  || |||||| |||| ||||||||||||||||||||||||||    
T  6518944 aaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttcttttcaattg 6519035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 656
Target Start/End: Complemental strand, 15776681 - 15776614
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||| ||||| |||| ||| |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  15776681 tttactactctctccgttttaaaatgagtgtcattttagtaaaaaaaattgttttaaaatgaatgtca 15776614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 696
Target Start/End: Complemental strand, 34209097 - 34208989
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtca--aaataattgttttaaaatgaatgtcaatt-cagtttccaata---caataataactttttc 687  Q
    ||||| |||| ||| ||||||||||| ||||||| ||  ||| |||||||| ||||||||||||| || ||||||||||||   |||||||||||||||     
T  34209097 tactctctccgttttaaaatgagtgttgttttagccagaaaaaaattgtttcaaaatgaatgtcactttcagtttccaataatgcaataataactttttt 34208998  T
Q  688 ttttcaatt 696  Q
    |||||||||    
T  34208997 ttttcaatt 34208989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 696
Target Start/End: Complemental strand, 43584574 - 43584471
Alignment:
Q  596 ctccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtc-aattcagtttccaatacaataataac-tttttcttttc 692  Q
    |||||||  ||||||||||||| ||| ||||| | |||| |||||||||||||||||||||   |||||||| |||| |||||||||| |||||||||||    
T  43584574 ctccctctgtttcaaaatgagtatcgctttagctaaaaaaaattgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttttcttttc 43584475  T
Q  693 aatt 696  Q
    ||||    
T  43584474 aatt 43584471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 694
Target Start/End: Complemental strand, 4911348 - 4911247
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||||||| ||||||| |||| |||||||| ||||| |||||||  || ||||||||||  ||||||| |||||||||||    
T  4911348 tactccatccgtttcaaaatgagtgtcg-tttagtcaaaaaaaattgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttctttt 4911250  T
Q  692 caa 694  Q
    |||    
T  4911249 caa 4911247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 697
Target Start/End: Complemental strand, 35766048 - 35765994
Alignment:
Q  644 aaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  35766048 aaaatgaatgtcactttcagttttcaatacaataataactttttcttttcaattg 35765994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 7735969 - 7736025
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatga 650  Q
    |||||| ||| |||||||||||||||| ||||||  |||||||||||||||||||||    
T  7735969 tactccttccgtttcaaaatgagtgtcattttagcaaaaataattgttttaaaatga 7736025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 681
Target Start/End: Complemental strand, 42978264 - 42978176
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataac 681  Q
    |||| ||||| ||| |||||||||||||||||||  |||| || ||||||||||||||| |||  |||||||| |||| ||||||||||    
T  42978264 tacttcctccgttttaaaatgagtgtcgttttagctaaaaaaaatgttttaaaatgaatatcactttcagttttcaatgcaataataac 42978176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 592 - 656
Target Start/End: Complemental strand, 4742468 - 4742402
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttag--tcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||||| ||||||||||||||||| |||||    ||||||||||||| |||||||||||||    
T  4742468 agtactccctccgtttcaaaatgagtgtcgctttagaaaaaaaataattgtttcaaaatgaatgtca 4742402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 697
Target Start/End: Original strand, 11977608 - 11977647
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  11977608 ttcagtttccaataccataataactttttcttttcaattg 11977647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 696
Target Start/End: Original strand, 27600354 - 27600457
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| ||||| ||| ||||||||   |||| |||||||||||||| ||| |   || ||||||||||| |||||||||||||||||||||    
T  27600354 tactccatccgttttaaaataagtatcgttttaacaaaaaaaattgttttaaaataaatattgctttcagtttccaatgcaataataactttttcttttc 27600453  T
Q  693 aatt 696  Q
    ||||    
T  27600454 aatt 27600457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 7731790 - 7731728
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||  ||| ||||| ||||||  ||||||||||| ||||||||||||||||||||||    
T  7731790 tactccctctattttaaaataagtgtcactttagtcaaaaaaattgttttaaaatgaatgtca 7731728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 593 - 656
Target Start/End: Complemental strand, 4751732 - 4751666
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttag---tcaaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||| ||||||||||||||||| |||||     ||||||||||||| |||||||||||||    
T  4751732 gtactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaataattgtttcaaaatgaatgtca 4751666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 589 - 681
Target Start/End: Original strand, 31041875 - 31041970
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtc--aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataac 681  Q
    |||| |||||| ||| |||||||||||||||| |||||  |  |||| |||||| ||||||||| |||||  ||||||||||||| ||||||||||    
T  31041875 tttattactccatccgtttcaaaatgagtgtcattttaaccaaaaaaaaattgtattaaaatgattgtcactttcagtttccaatgcaataataac 31041970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 670
Target Start/End: Complemental strand, 39804248 - 39804169
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc--aaaataattgttttaaaatgaatgtca-attcagtttccaat 670  Q
    |||||||||| ||| ||||| |||||||||||||||  |||| |||||||| ||||||||| |||  |||||||||||||    
T  39804248 tactccctccgttttaaaataagtgtcgttttagtcaaaaaaaaattgtttcaaaatgaatatcactttcagtttccaat 39804169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 166847 - 166784
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||| |||||   |||| |||||||| |||||||||||||    
T  166847 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtca 166784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 4967611 - 4967548
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgtttt-agtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| |||||||||||||||| |||| |   |||| ||||||||||||||||||||||    
T  4967611 tactccctccgtttcaaaatgagtgtcattttaacaaaaaaaaattgttttaaaatgaatgtca 4967548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 17674163 - 17674226
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaa-ataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||| ||||||||||||  |||||||||| | |||||||| |||||||||||||    
T  17674163 tactccctccgttttaaaatgagtgtcactttagtcaaataaaattgtttcaaaatgaatgtca 17674226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 696
Target Start/End: Complemental strand, 25362962 - 25362895
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| |||||||| ||||||||||| | || ||||||| ||| ||||||| |||||||||||||||||    
T  25362962 aaaaaaattgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttcttttcaatt 25362895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 8336593 - 8336503
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaat-aattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||  ||||| || | ||| ||||||||||||| || || ||| |||| |||||||||||| || ||||||||||    
T  8336593 aaaatgagtgtcgttttagctaaaataaaatatttcaaaatgaatgtcacttccatttttcaatgcaataataacttctttttttcaattg 8336503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 696
Target Start/End: Original strand, 14005912 - 14005950
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  14005912 ttcagtttccaatgcaataataactttttctttttaatt 14005950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 696
Target Start/End: Complemental strand, 15167210 - 15167106
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtca--aaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||||| ||| ||| | ||||||||||||  ||  ||| || ||||| ||||||||||||| || |||||| |||| ||||||||||||||| |||    
T  15167210 tactccctccgttttaaagtaagtgtcgttttaaccacaaaagaaatgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt-ttt 15167112  T
Q  691 tcaatt 696  Q
    ||||||    
T  15167111 tcaatt 15167106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 681
Target Start/End: Original strand, 31055686 - 31055780
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaat-tcagtttccaatacaataataac 681  Q
    |||| |||||| ||| ||||||||| |||||| |||||| ||||| || || ||||||||||||||||| | ||| ||| |||| ||||||||||    
T  31055686 tttattactccatccgtttcaaaataagtgtcattttagccaaaaaaaattattttaaaatgaatgtcactctcaattttcaattcaataataac 31055780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Complemental strand, 4631160 - 4631127
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  4631160 tactccctccgtttcaaaatgagtgtcgttttag 4631127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 10344855 - 10344888
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  10344855 tactccctccgtttcaaaatgagtgtcgttttag 10344888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 697
Target Start/End: Original strand, 32158586 - 32158619
Alignment:
Q  664 ttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||||| ||||||||||    
T  32158586 ttccaatacaataataacttttttttttcaattg 32158619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 36073813 - 36073724
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||  ||| |  |||| ||||||||  |||||||||||| || |  ||| |||| ||||||||||||||||||||||||||    
T  36073813 aaaatgagtgtcactttggcaaaaaaaattgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttcttttcaattg 36073724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 605 - 656
Target Start/End: Complemental strand, 793793 - 793741
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    ||||||||||||||||| ||||| ||||| || |||||| |||||||||||||    
T  793793 tttcaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtca 793741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 594 - 626
Target Start/End: Complemental strand, 4371591 - 4371559
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgtttta 626  Q
    |||||||||| ||||||||||||||||||||||    
T  4371591 tactccctccgtttcaaaatgagtgtcgtttta 4371559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 630 - 701
Target Start/End: Complemental strand, 14162063 - 14161991
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttcaattggtac 701  Q
    |||| |||||| ||||||| ||||||| || || |||| ||| ||||||||| ||||||||||||||| ||||    
T  14162063 aaaaaaattgtattaaaataaatgtcattttaggtttctaatgcaataataattttttcttttcaatttgtac 14161991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 24163912 - 24163808
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| |||||||||||| |||||| ||||| ||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  24163912 tactccctccgttttaaaatgagtgtcattttagccaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttc 24163813  T
Q  693 aattg 697  Q
    |||||    
T  24163812 aattg 24163808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 233988 - 234093
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttctttt 691  Q
    |||||||||  ||||||||||||||||||||||| | |||| |||||||| ||||||||||||| ||  |||||||||| ||||||||||||||||||||    
T  233988 tactccctctgtttcaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctttt 234087  T
Q  692 caattg 697  Q
    ||||||    
T  234088 caattg 234093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 29399900 - 29400005
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtca-aaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| |||||||||||||||||||||||  | ||| |||||||| ||||||||||||| || ||||||||||| ||||||||| ||||||||||    
T  29399900 tactccctccgtttcaaaatgagtgtcgttttagcaacaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctttt 29399999  T
Q  692 caattg 697  Q
    ||||||    
T  29400000 caattg 29400005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 595 - 697
Target Start/End: Complemental strand, 4850693 - 4850589
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||||| |||||||||||||||||| |||||  |||| || |||||| ||||||||||||| || || |||||||| |||||||||||||||||||||    
T  4850693 actccctcattttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttc 4850594  T
Q  693 aattg 697  Q
    |||||    
T  4850593 aattg 4850589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 19674936 - 19675039
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||||||||||| ||||| ||||| |||  ||  ||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  19674936 tactccctccgtttcaaaatgagtgtcgatttagccaaaaaaataattc-aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttc 19675034  T
Q  693 aattg 697  Q
    |||||    
T  19675035 aattg 19675039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 12063710 - 12063604
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag--tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttt 690  Q
    |||||||||| |||||||||||||||||||||||    |||||||||||||  ||||||||||||  ||||||||||||| ||||||||| ||||| |||    
T  12063710 tactccctccctttcaaaatgagtgtcgttttagaagaaaaataattgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttttttt 12063611  T
Q  691 tcaattg 697  Q
    |||||||    
T  12063610 tcaattg 12063604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 32429240 - 32429343
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| ||||||||||||||||||| ||||| |||||||| |||| |||||||| ||  | |||||||| |||||||||||||||||||||    
T  32429240 tactccatccgttttaaaatgagtgtcgttttagccaaaa-aattgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttcttttc 32429338  T
Q  693 aattg 697  Q
    |||||    
T  32429339 aattg 32429343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 32193671 - 32193761
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||  || |||||| ||| ||||||||| ||||||||||||||||    
T  32193671 aaaatgagtgtcgttttagccaaaataatttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttcttttcaattg 32193761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 10520822 - 10520733
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||| ||||||  |||| |||||||||||||| ||||||| || || ||| |||||||||||||| ||||||||||||||||    
T  10520822 aaaatgagtgtcattttagctaaaaaaattgttttaaaataaatgtcactttcaattttcaatacaataataattttttcttttcaattg 10520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 23259524 - 23259419
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaata-attgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||||| || ||||||||||||||| ||||||  ||||| | ||||||| ||||||||||||| || ||||||||||| ||| |||||||||| |||||    
T  23259524 tactcccaccgtttcaaaatgagtgttgttttatccaaaaaatattgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataacttttactttt 23259425  T
Q  692 caattg 697  Q
    ||||||    
T  23259424 caattg 23259419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 696
Target Start/End: Complemental strand, 18737272 - 18737185
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||||||| |||||||||   |||| |||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||    
T  18737272 aaaatgagcgtcgttttaactaaaa-aattgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttcttttcaatt 18737185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 598 - 652
Target Start/End: Complemental strand, 17345329 - 17345275
Alignment:
Q  598 ccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaat 652  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  17345329 ccctccatttcaaaatgagtgtcattttagtcaaaaaaattgttttaaaatgaat 17345275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 29927162 - 29927224
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  29927162 tactccttccgtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtca 29927224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 696
Target Start/End: Complemental strand, 1502928 - 1502834
Alignment:
Q  604 ttttcaaaatgagtgtcgttttagtcaaaataat-tgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| |||||||||||||||||||| |||| ||  ||||||||||| ||||||| || ||||||||||| ||||| ||| | |||||||||||||    
T  1502928 tttttaaaatgagtgtcgttttagtaaaaaaaaaatgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttcttttcaatt 1502834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 17246804 - 17246743
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||    
T  17246804 tactccctccgtttcaaaatgagtgtcgttttagccaaaa-aaatgtttcaaaatgaatgtca 17246743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 9940602 - 9940707
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||||||| ||||   |||| || |||||||||||||| ||||| || |||||| |||| ||||||||||||||  ||||    
T  9940602 tactccatccgtttcaaaatgagtgtcgctttaacaaaaaaaaattgttttaaaatgattgtcactttcagttttcaatgcaataataacttttcttttt 9940701  T
Q  692 caattg 697  Q
    ||||||    
T  9940702 caattg 9940707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 696
Target Start/End: Complemental strand, 12459509 - 12459413
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| ||| |||| |||||||||||||| ||||| || || || ||||||||||||| || | ||||| |||||||||||| ||||||||||||||||    
T  12459509 ctccgttttaaaacgagtgtcgttttag-caaaaaaaatgcttcaaaatgaatgtcactttcggtttctaatacaataatatctttttcttttcaatt 12459413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 691
Target Start/End: Complemental strand, 21272301 - 21272202
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||| ||||||||||   ||||| |||||| |||| |||||||||||||| ||| || |||||||||||  ||||||||| |||||||||    
T  21272301 tactccctccattttaaaatgagtgattttttaatcaaaaaaatttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctttt 21272202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 697
Target Start/End: Complemental strand, 34513736 - 34513697
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34513736 ttcagtttccaatgcaataataactttttcttttcaattg 34513697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 686
Target Start/End: Complemental strand, 10540707 - 10540613
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttttt 686  Q
    |||| ||||| ||| ||||||||||||||||||| | |||| |||||||| ||||| |||||||  |||| |||||||| |||||||||| ||||    
T  10540707 tacttcctccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt 10540613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 686
Target Start/End: Complemental strand, 13504047 - 13503953
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataacttttt 686  Q
    |||||||| | ||| |||||||||| |||||||  | |||| || ||||| ||||||||||||| || ||||||||||| |||||||||||||||    
T  13504047 tactcccttcgtttgaaaatgagtgacgttttaactaaaaaaaaatgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 17552444 - 17552341
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagt-caaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||  ||| ||||||| ||||||||||||  |||| ||||||||  ||||||||||||  ||||||||||||| ||||||||  ||||| ||||    
T  17552444 tactccctctattttaaaatgaatgtcgttttagtaaaaaaaaattgtttcgaaatgaatgtcattttcagtttccaatgcaataata--tttttttttt 17552347  T
Q  692 caattg 697  Q
    ||||||    
T  17552346 caattg 17552341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 644 - 697
Target Start/End: Complemental strand, 29713554 - 29713500
Alignment:
Q  644 aaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| || | ||||||||| ||||||||||||||||||||||||||    
T  29713554 aaaatgaatgtcattttccgtttccaatgcaataataactttttcttttcaattg 29713500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 19600376 - 19600433
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaa 651  Q
    |||||| ||| ||| ||||||| ||||||||||| |||||||||||||| ||||||||    
T  19600376 tactccatccgttttaaaatgattgtcgttttagacaaaataattgtttcaaaatgaa 19600433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 577032 - 577119
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||| ||||||||| ||||| |||||||||||||| | | ||| || |||||| |||| ||||||||||||| || ||||||||    
T  577032 aaaatgagtatcgttttag-caaaaaaattgttttaaaataactatcactttcagttttcaatgcaataataactttatcatttcaatt 577119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 691
Target Start/End: Complemental strand, 31443634 - 31443546
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||||||||||| || |||||  ||||| || |||||| ||||||||||| | || ||||||||||| ||||||||||||||| ||||    
T  31443634 tttcaaaatgagtatccttttatccaaaaaaaattgtttaaaaatgaatgttattttcagtttccaatgcaataataactttttttttt 31443546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 1924862 - 1924799
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    |||||||||  ||||||||||||||||  ||||| ||||| || ||||||||||||||||||||    
T  1924862 tactccctctgtttcaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtca 1924799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 696
Target Start/End: Complemental strand, 3988940 - 3988838
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||||||| ||||||| |||  |||| || |||||| ||||| |||  |  ||||||||||||| ||||||||| |||||||||||    
T  3988940 tactccatccgtttcaaaatgaatgtcgttctagcaaaaaaaaattgtttcaaaataaatcact-ttcagtttccaatgcaataataattttttcttttc 3988842  T
Q  693 aatt 696  Q
    ||||    
T  3988841 aatt 3988838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 656
Target Start/End: Original strand, 6143050 - 6143101
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||| ||||  ||||| ||||| ||||||||||||||||||||||    
T  6143050 tttcaaaatgaatgtcactttagccaaaaaaattgttttaaaatgaatgtca 6143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 697
Target Start/End: Complemental strand, 31233782 - 31233719
Alignment:
Q  635 aattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||||  |||||||| || | |||||||||  |||||||||||||||    
T  31233782 aattgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattg 31233719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 656
Target Start/End: Complemental strand, 4132155 - 4132110
Alignment:
Q  611 aatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||| ||| |||||| ||||| ||||||||||||||||||||||    
T  4132155 aatgagcgtcattttagccaaaaaaattgttttaaaatgaatgtca 4132110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 29915494 - 29915558
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc--aaaataattgttttaaaatgaatgtca 656  Q
    |||||| ||| ||||||||||||||||  |||||||  |||| |||||||| |||||||||||||    
T  29915494 tactccatccgtttcaaaatgagtgtcactttagtcaaaaaaaaattgtttcaaaatgaatgtca 29915558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 38016330 - 38016434
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||||||||||||||||||| ||||  |||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  38016330 tactccatccgtttcaaaatgagtgtcgttttagccaaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttc 38016429  T
Q  693 aattg 697  Q
    |||||    
T  38016430 aattg 38016434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 599 - 697
Target Start/End: Complemental strand, 30934997 - 30934900
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||    
T  30934997 cctccatttcaaaatgagtgtcgttttagctaaaaaaaattgttttaaaatgaatgtca--tcagtttccaatgcaataataattttttcttttcaattg 30934900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 45213916 - 45213813
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||| ||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||    
T  45213916 tacttcctccgttttaaaatgagtgtcgttttagttaaaa-aattgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttcttttc 45213818  T
Q  693 aattg 697  Q
    |||||    
T  45213817 aattg 45213813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 594 - 696
Target Start/End: Original strand, 2457962 - 2458065
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||||||||| |||||| || ||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||     
T  2457962 tactccatccgtttcaaaatgagtatcgtttaagccaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttcttttt 2458061  T
Q  693 aatt 696  Q
    ||||    
T  2458062 aatt 2458065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 593 - 697
Target Start/End: Original strand, 30431074 - 30431179
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||||||||  ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||  |||||||| |||| ||||||||| ||||||||||    
T  30431074 gtactccctctgtttcaaaatgagtgtcgttttagccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctttt 30431173  T
Q  692 caattg 697  Q
    ||||||    
T  30431174 caattg 30431179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 593 - 697
Target Start/End: Complemental strand, 33194227 - 33194122
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||||||||| ||| |||||||||||||||||||  |||| ||||||||||||||||||||||  ||||||||||||| |||| |||||||||| ||||    
T  33194227 gtactccctccattttaaaatgagtgtcgttttagcaaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaatgataactttttatttt 33194128  T
Q  692 caattg 697  Q
     |||||    
T  33194127 taattg 33194122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 3153001 - 3152897
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| |||||||||||| ||||||  |||| |||||||| |||||||||||||  |||||||| |||| |||||||||||||||||||||    
T  3153001 tactccctccgttttaaaatgagtgtcattttagcaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc 3152902  T
Q  693 aattg 697  Q
    |||||    
T  3152901 aattg 3152897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 696
Target Start/End: Complemental strand, 32492374 - 32492273
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||||||||||||||||| ||||  |||||||| |||||||||||||  |||| ||| |||| |||||||||||||||||||||    
T  32492374 tactccctccgtttcaaaatgagtgtcgttttaggcaaa--aattgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttc 32492277  T
Q  693 aatt 696  Q
    ||||    
T  32492276 aatt 32492273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 595 - 697
Target Start/End: Complemental strand, 42571724 - 42571620
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||| |||| ||||||||||||||||| ||||| ||||| || |||||| ||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  42571724 actcgctccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttcttttc 42571625  T
Q  693 aattg 697  Q
    |||||    
T  42571624 aattg 42571620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 45566761 - 45566858
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttca 693  Q
    |||||||||| ||||||||||| |||||||||| |||| | ||||||||||||||||||||||      ||| |||||||||||||||||||||||||||    
T  45566761 tactccctccgtttcaaaatgaatgtcgttttaatcaataaaattgttttaaaatgaatgtca------ttttcaatacaataataactttttcttttca 45566854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 594 - 696
Target Start/End: Original strand, 19115342 - 19115445
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| |||||||| |||| ||||| ||||| |||||||| |||||||||||||  || |||||||||| |||||||||||||||||||||    
T  19115342 tactccctccgttttaaaatgagcgtcgctttagccaaaaaaattgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttc 19115441  T
Q  693 aatt 696  Q
    ||||    
T  19115442 aatt 19115445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 4392150 - 4392255
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||| ||||| ||| |||||||||||||||||||  |||| ||||||||| ||||||||||||| || |||||||||||  |||||||||||||||||||    
T  4392150 tactacctccgttttaaaatgagtgtcgttttagcaaaaaataattgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttctttt 4392249  T
Q  692 caattg 697  Q
    ||||||    
T  4392250 caattg 4392255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 593 - 692
Target Start/End: Complemental strand, 23208485 - 23208387
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||||||||| ||||||| |||||||||||||||  |||| |||||||| |||||||||||||  |||||||||||  |||||||||||||||||||||    
T  23208485 gtactccctccgtttcaaattgagtgtcgttttagctaaaaaaattgtttcaaaatgaatgtcactttcagtttcca--acaataataactttttctttt 23208388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 39356839 - 39356944
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||| |||||||||| |||| || |||||||||||| ||||||| || |||||| |||| |||||||||| |||||||||    
T  39356839 tactccatccgtttcaaaatgagtatcgttttagttaaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaataataacattttctttt 39356938  T
Q  692 caattg 697  Q
    ||||||    
T  39356939 caattg 39356944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 41850344 - 41850449
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttctttt 691  Q
    ||||| |||| ||| ||||||| |||| |||||| ||||| |||||||||||||||||||| || ||  |||||||||| ||||||||||||||||||||    
T  41850344 tactctctccattttaaaatgaatgtcattttagccaaaaataattgttttaaaatgaatgacacttttagtttccaatgcaataataactttttctttt 41850443  T
Q  692 caattg 697  Q
    ||||||    
T  41850444 caattg 41850449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 50038367 - 50038262
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||| |||| ||| ||||||||||||| |||||  |||| || |||||||||||||||||||| || |||||| |||| ||||||||||||||||||||    
T  50038367 tactctctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctttt 50038268  T
Q  692 caattg 697  Q
    ||||||    
T  50038267 caattg 50038262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 50088512 - 50088407
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttctttt 691  Q
    |||||| ||| |||||||||||||||||||||||  |||| || ||||||||||||||| |||| ||  |||||||||| ||||| ||||||||||||||    
T  50088512 tactccttccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttctttt 50088413  T
Q  692 caattg 697  Q
    ||||||    
T  50088412 caattg 50088407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 599 - 697
Target Start/End: Complemental strand, 33024491 - 33024391
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||| ||| |||||||||||||||||||| |||| || || ||||||||||||||| | || ||||||||||| ||||||||||||| |||||||||||    
T  33024491 cctccattttaaaatgagtgtcgttttagtaaaaaaaaattattttaaaatgaatgttactttcagtttccaatgcaataataactttatcttttcaatt 33024392  T
Q  697 g 697  Q
    |    
T  33024391 g 33024391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 606 - 697
Target Start/End: Original strand, 36460774 - 36460865
Alignment:
Q  606 ttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||||| ||||| ||| |||| ||||||||| ||| || |||||| |||| ||||||||||||||||||||||||||    
T  36460774 ttcaaaatgagtgtcgttttagccaaaaaaat-gtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattg 36460865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 696
Target Start/End: Complemental strand, 41287694 - 41287588
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaa---taataactttttctt 689  Q
    |||||||||| ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||  ||| ||||||| | |||   |||||||||||||||    
T  41287694 tactccctccgtttcaaaataagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtcactttcggtttccagtgcaatactaataactttttctt 41287595  T
Q  690 ttcaatt 696  Q
    |||||||    
T  41287594 ttcaatt 41287588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 4758960 - 4759050
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| |||||| |||| || |||||||||||| ||||||| || || |||||||| ||||||||||||||||||||||||||    
T  4758960 aaaatgagtgtcgctttagtaaaaagaaattgttttaaaataaatgtcactttcactttccaatgcaataataactttttcttttcaattg 4759050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 696
Target Start/End: Original strand, 42886704 - 42886809
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttt 690  Q
    |||||||||| ||||||||||||||||| ||||| ||||| ||  |||||| ||||||||||| | || |  |||||||| |||||||||||||||||||    
T  42886704 tactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttcttt 42886803  T
Q  691 tcaatt 696  Q
    ||||||    
T  42886804 tcaatt 42886809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 53200865 - 53200771
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||| |||||||||||  |||| || |||||||||||||||||||| ||  ||||| |||| ||||||||||||||||||||||||||    
T  53200865 tttcaaaatgaatgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattg 53200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 20512694 - 20512633
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtc 655  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  20512694 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtc 20512633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 48901671 - 48901779
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-----ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttc 687  Q
    |||||| ||| ||||||||||| |||||||||| |||||| ||     |||||| ||||||||||||| || ||||||||||| ||||||||||||||||    
T  48901671 tactccatccgtttcaaaatgattgtcgtttta-tcaaaaaaaaaaaattgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttc 48901769  T
Q  688 ttttcaattg 697  Q
    ||||||||||    
T  48901770 ttttcaattg 48901779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 48903237 - 48903345
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-----ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttc 687  Q
    |||||| ||| ||||||||||| |||||||||| |||||| ||     |||||| ||||||||||||| || ||||||||||| ||||||||||||||||    
T  48903237 tactccatccgtttcaaaatgattgtcgtttta-tcaaaaaaaaaaaattgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttc 48903335  T
Q  688 ttttcaattg 697  Q
    ||||||||||    
T  48903336 ttttcaattg 48903345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 50646306 - 50646201
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||| ||||||||||||||||||   |||| || |||||| ||||| ||||||| || ||||||||||| ||||||||||||||||||||    
T  50646306 tactccttccgttttaaaatgagtgtcgttttaacaaaaaaaaattgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctttt 50646207  T
Q  692 caattg 697  Q
    ||||||    
T  50646206 caattg 50646201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 697
Target Start/End: Complemental strand, 35557957 - 35557849
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttct 688  Q
    ||||||||||||| ||| ||||||||||||| |||||  |||| || ||||||||||||  || ||| || ||||||||||| ||||||||| |||||||    
T  35557957 tagtactccctccgttttaaaatgagtgtcgatttaggaaaaaaaaattgttttaaaatatatatcactttcagtttccaatgcaataataattttttct 35557858  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  35557857 tttcaattg 35557849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 587 - 697
Target Start/End: Original strand, 51397957 - 51398069
Alignment:
Q  587 tttttagtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttt 684  Q
    |||||| |||||| ||| ||| ||||||||||||||||||| | |||| |||||||| ||||| |||||||  || ||||| ||||  ||||||||||||    
T  51397957 tttttaatactccatccgttttaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaataaatgtcacttttagttttcaatgtaataataacttt 51398056  T
Q  685 ttcttttcaattg 697  Q
    |||||||||||||    
T  51398057 ttcttttcaattg 51398069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 609 - 694
Target Start/End: Complemental strand, 9189615 - 9189529
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaa 694  Q
    |||||||||||| ||||| | |||| |||| |||||||||||||||||  |||||||| ||||  ||||||||||||||||||||||    
T  9189615 aaaatgagtgtcattttaataaaaaaaattattttaaaatgaatgtcactttcagttttcaatgaaataataactttttcttttcaa 9189529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 31583615 - 31583525
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||| |||| || |||||||||||| ||||||| || ||||||||| | |||||||||  |||||||||||||||    
T  31583615 aaaatgagtgtcgttttagtaaaaaaaaattgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttcttttcaattg 31583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 637 - 697
Target Start/End: Original strand, 11393543 - 11393604
Alignment:
Q  637 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||| || || |||||||| ||||||||||||||||||||||||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttcttttcaattg 11393604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 30426483 - 30426415
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||||||||||| || ||||||||||| |||||||||||||||||||| |||||    
T  30426483 aaaaaaattgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctttttaattg 30426415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 44648599 - 44648536
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| |||||||||||||||||||||||   |||| ||||||||||||||||||||||    
T  44648599 tactccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatgtca 44648536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 630 - 696
Target Start/End: Complemental strand, 47895503 - 47895436
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||| |||||||| ||||||||||||| || || |||||||| |||||||||||||||||||||||||    
T  47895503 aaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaatt 47895436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 6938256 - 6938194
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtc 655  Q
    |||||||||| ||||||||||||||||| |||||| |||| || |||||||||||||||||||    
T  6938256 tactccctccgtttcaaaatgagtgtcgctttagtaaaaaaaatttgttttaaaatgaatgtc 6938194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 695
Target Start/End: Complemental strand, 11020021 - 11019919
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||||| |||||| |||||  ||||| | |||||||||||| |||||||  |||| ||| |||| ||||||||| |||||||||||    
T  11020021 tactccttccgtttcaaaataagtgtccttttaaacaaaaaatttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttcttttc 11019922  T
Q  693 aat 695  Q
    |||    
T  11019921 aat 11019919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 697
Target Start/End: Complemental strand, 36844935 - 36844833
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaa 694  Q
    ||||||| ||| ||||||||||||||||||   |||| ||||||||| ||||  ||||||| || |||||| |||| ||||||||| |||||||||||||    
T  36844935 tccctccgttttaaaatgagtgtcgttttaacaaaaaataattgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttcttttcaa 36844836  T
Q  695 ttg 697  Q
    |||    
T  36844835 ttg 36844833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 37225796 - 37225730
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||||| ||| ||||||||||||||||||| | |||| |||||||| |||||||||||||    
T  37225796 tagtactccctccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtca 37225730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 691
Target Start/End: Original strand, 38140906 - 38141003
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||| |||| |||||||||||||| ||||| || ||||| ||||||||||||| || ||||||||||| |||||||||| |||| ||||    
T  38140906 tactccatccgttttaaaacgagtgtcgttttag-caaaaaaaatgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttttttt 38141003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 694
Target Start/End: Original strand, 42071967 - 42072041
Alignment:
Q  621 gttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaa 694  Q
    |||||||  |||| ||||||||||||||| |||||| ||  |||||||||| |||||||||||||||||||||||    
T  42071967 gttttagcaaaaaaaattgttttaaaatggatgtcatttttagtttccaatgcaataataactttttcttttcaa 42072041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 637 - 697
Target Start/End: Original strand, 44676219 - 44676280
Alignment:
Q  637 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||| ||||||||||||| || ||||||||||| |||| |||||||||||||||||||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattg 44676280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 696
Target Start/End: Original strand, 30315279 - 30315367
Alignment:
Q  610 aaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||| |||||||||| ||||| || |||||| ||||||||||||| || | ||||||||| ||| |||||||||||||||| ||||    
T  30315279 aaatgagcgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttcttttgaatt 30315367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 697
Target Start/End: Original strand, 40487801 - 40487887
Alignment:
Q  610 aaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||| ||||| |||  ||| ||||||||||||| ||  | |||||||| ||||||||||||||||||||||||||    
T  40487801 aaatgagtgtcgttttag-caaaaaaata-tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttcttttcaattg 40487887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 697
Target Start/End: Original strand, 47137954 - 47138022
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||||||||||||||||| ||  ||||| |||| ||||||||||||||| ||||||||||    
T  47137954 aaaaaaattgttttaaaatgaatgtcatttttagttttcaatgcaataataactttttattttcaattg 47138022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 653
Target Start/End: Original strand, 25061660 - 25061719
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatg 653  Q
    |||||| ||| ||||||||||||||||  ||||| ||||| |||||||||||||||||||    
T  25061660 tactccttccgtttcaaaatgagtgtcactttagccaaaaaaattgttttaaaatgaatg 25061719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 590 - 656
Target Start/End: Complemental strand, 25722663 - 25722596
Alignment:
Q  590 ttagtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||||||||||||| ||||||||||||||||| ||||| | |||| |||| ||| |||||||||||||    
T  25722663 ttagtactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaattatttcaaaatgaatgtca 25722596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 43169289 - 43169352
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||| ||||||||||||| ||||||| |||| |||||||| |||||||||||||    
T  43169289 tactccctccgttttaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtca 43169352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 1341117 - 1341055
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||| | ||| |||||||||||| |||||||||||| | || |||||||||||||||||    
T  1341117 tactcccttcgttttaaaatgagtgtcattttagtcaaaaaatttattttaaaatgaatgtca 1341055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 694
Target Start/End: Complemental strand, 23525512 - 23525410
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||| |||  |||||||||||||| || |||||||||||| ||||| | ||  | |||||||| ||||||||| ||||||||||    
T  23525512 tactccttccgtttcaaaataagtcccgttttagtcaaaaaaaattgttttaaaataaatgttacttttgatttccaatgcaataataagtttttctttt 23525413  T
Q  692 caa 694  Q
    |||    
T  23525412 caa 23525410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 644 - 697
Target Start/End: Complemental strand, 36729955 - 36729901
Alignment:
Q  644 aaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| || || |||||||| ||||||||||||||||||||||||||    
T  36729955 aaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattg 36729901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 54261370 - 54261428
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaa 651  Q
    |||||||||| ||||||||||||||||||||||| | |||| |||||||| ||||||||    
T  54261370 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaa 54261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 654
Target Start/End: Complemental strand, 2568185 - 2568140
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgt 654  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  2568185 aaaatgaatgtcgctttagtcaaaaaaattgttttaaaatgaatgt 2568140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 22730893 - 22730946
Alignment:
Q  606 ttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt 659  Q
    |||||||||| |||||| |||| ||||| |||||||||||| ||||||||||||    
T  22730893 ttcaaaatgaatgtcgtattagccaaaaaaattgttttaaactgaatgtcaatt 22730946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 691
Target Start/End: Original strand, 38363737 - 38363838
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctt 689  Q
    ||||||||| ||  ||| |||||||||||||||||||  |||| ||  |||| |||||||||||||  |||||||| |||| |||||||||| |||| ||    
T  38363737 tagtactccatctgttttaaaatgagtgtcgttttagcaaaaaaaaaagtttcaaaatgaatgtcactttcagtttacaatgcaataataaccttttttt 38363836  T
Q  690 tt 691  Q
    ||    
T  38363837 tt 38363838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 44645294 - 44645355
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtc 655  Q
    |||||| ||| |||||||||||||||||||||||  |||| |||| ||| ||||||||||||    
T  44645294 tactccatccgtttcaaaatgagtgtcgttttagcaaaaaaaattatttcaaaatgaatgtc 44645355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 658 - 694
Target Start/End: Original strand, 52654324 - 52654360
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaa 694  Q
    |||||||| ||||||||||||||||||||||||||||    
T  52654324 ttcagttttcaatacaataataactttttcttttcaa 52654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 697
Target Start/End: Original strand, 22857086 - 22857149
Alignment:
Q  635 aattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||||| ||  | ||| ||||  |||||||||||||||||||||||||    
T  22857086 aattgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttcttttcaattg 22857149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 656
Target Start/End: Complemental strand, 26187458 - 26187411
Alignment:
Q  610 aaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||    
T  26187458 aaatgagtgtcgttttagttaaaaaaaattgttttaaaatgaatgtca 26187411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 656
Target Start/End: Original strand, 34059828 - 34059894
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtca 656  Q
    |||||||||| | ||| ||||||||||||  ||||||||||| ||  ||||||||||||||||||||    
T  34059828 agtactccctacgttttaaaatgagtgtcactttagtcaaaaaaaatttgttttaaaatgaatgtca 34059894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 19373555 - 19373645
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||| ||||||| |||| || |||||| ||||||| ||||| || || ||| ||||  |||||||||||||| ||||||||||    
T  19373555 aaaatgagtgtcattttagttaaaaaaaattgtttcaaaatgactgtcactttcaattttcaatgaaataataactttttattttcaattg 19373645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 691
Target Start/End: Complemental strand, 31853745 - 31853659
Alignment:
Q  607 tcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttctttt 691  Q
    |||||||||| || ||||||| ||||| || |||||| ||||| ||||||| ||  |||||||| ||||||||||| ||||||||||    
T  31853745 tcaaaatgagagttgttttagccaaaaaaaattgtttcaaaataaatgtcacttttagtttccagtacaataataattttttctttt 31853659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 655
Target Start/End: Complemental strand, 2662678 - 2662613
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtc 655  Q
    |||||||| |||| ||| ||||||||||||| ||||| | |||| | |||||||||||||||||||    
T  2662678 tagtactcgctccgttttaaaatgagtgtcgctttagccaaaaagatttgttttaaaatgaatgtc 2662613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 697
Target Start/End: Original strand, 27067634 - 27067667
Alignment:
Q  664 ttccaatacaataataactttttcttttcaattg 697  Q
    ||||||| ||||||||||||||||||||||||||    
T  27067634 ttccaatgcaataataactttttcttttcaattg 27067667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 44648322 - 44648355
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  44648322 tactccctccgtttcaaaatgagtgtcgttttag 44648355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 638 - 697
Target Start/End: Complemental strand, 7231047 - 7230987
Alignment:
Q  638 tgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaattg 697  Q
    ||||| ||||||||||||| ||  |||| | ||| ||||||||||||||||||||||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttcttttcaattg 7230987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 591 - 627
Target Start/End: Complemental strand, 30706703 - 30706667
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttag 627  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  30706703 tagtactccctccgtttcaaaatgagtgtcgctttag 30706667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 589 - 633
Target Start/End: Original strand, 42791277 - 42791321
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaa 633  Q
    ||||||||||||||| ||||||||||||||||  ||||| |||||    
T  42791277 tttagtactccctccgtttcaaaatgagtgtcactttagccaaaa 42791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 613 - 656
Target Start/End: Complemental strand, 51058329 - 51058285
Alignment:
Q  613 tgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtca 656  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||    
T  51058329 tgagtgtcgttttagccaaaaaaatttgttttaaaatgaatgtca 51058285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 4132978 - 4133083
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||||||||||||||||||||||| | |||| |||||||| |||||||||||||  ||| ||||||||| ||||||||||||||||||||    
T  4132978 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctttt 4133077  T
Q  692 caattg 697  Q
    ||||||    
T  4133078 caattg 4133083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 589 - 696
Target Start/End: Complemental strand, 29396884 - 29396775
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttttt 686  Q
    |||| |||||||||| ||||||||||||||||| ||||||| |||| |||||||| |||||||||||||  ||| ||||||||| |||||||||||||||    
T  29396884 tttaatactccctccatttcaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataacttttt 29396785  T
Q  687 cttttcaatt 696  Q
    ||||||||||    
T  29396784 cttttcaatt 29396775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 594 - 695
Target Start/End: Original strand, 29808768 - 29808869
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||  |||||||| |||| |||| ||||||||||||||||    
T  29808768 tactccctccgtttcaaaataagtgtcgttttattcaaaa-aattgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttcttttc 29808866  T
Q  693 aat 695  Q
    |||    
T  29808867 aat 29808869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 34546529 - 34546425
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||||||||||||||||  ||||| |||||||| |||||||||||||  |||| |||||||| ||||||||| ||||||||||     
T  34546529 tactccctccgtttcaaaatgagtgtcgttttaaccaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttctttta 34546430  T
Q  693 aattg 697  Q
    |||||    
T  34546429 aattg 34546425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 43427475 - 43427381
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||| ||||| ||||| |||| |||| ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  43427475 tttcaaaatgagtgtcgctttagacaaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 43427381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 588 - 697
Target Start/End: Complemental strand, 441437 - 441325
Alignment:
Q  588 ttttagtactccctccttttcaaaatgagtgtcgttttagtc--aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttt 684  Q
    ||||| |||||||||| ||||||||| ||||||||||||| |  |||| |||||||| |||||||||||||  ||| |||| |||| |||||||||||||    
T  441437 ttttaatactccctccgtttcaaaataagtgtcgttttagccaaaaaaaaattgtttcaaaatgaatgtcactttctgttttcaatgcaataataacttt 441338  T
Q  685 ttcttttcaattg 697  Q
    |||||||||||||    
T  441337 ttcttttcaattg 441325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 12342047 - 12342152
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||||||||||||  ||||| || |||||| ||||||||||||| || | ||||||||| ||||||||||||||||||||    
T  12342047 tactccttccgtttcaaaatgagtgtcgttttaaccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctttt 12342146  T
Q  692 caattg 697  Q
    ||||||    
T  12342147 caattg 12342152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 16792439 - 16792542
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| ||||||||||||| ||||| ||||| |||||||| ||||||||||||| ||  |||||||||| |||||||||||||||||||||    
T  16792439 tactccatccgttttaaaatgagtgtcgctttag-caaaaaaattgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttc 16792537  T
Q  693 aattg 697  Q
    |||||    
T  16792538 aattg 16792542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 17696023 - 17695919
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||| | ||||||||||||||||| ||||| ||||| |||||||| ||||||| |||||  |||||||||||||   |||||||||||||||||||    
T  17696023 tactcccttcgtttcaaaatgagtgtcgctttagccaaaaaaattgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttcttttc 17695924  T
Q  693 aattg 697  Q
    |||||    
T  17695923 aattg 17695919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 13561947 - 13562053
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||| ||| |||||||||||||||| |||||| ||||||||  |||||| ||||| ||||||| || ||||||| ||| |||||||||||||||||||    
T  13561947 tactccatccgtttcaaaatgagtgtcattttagccaaaataaatttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttcttt 13562046  T
Q  691 tcaattg 697  Q
    |||||||    
T  13562047 tcaattg 13562053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 591 - 697
Target Start/End: Complemental strand, 16807718 - 16807611
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctt 689  Q
    |||||||| |||| ||| |||||||||||||||||| | |||| |||||||| ||||| |||||||  || |||||||||| ||||||||| ||||||||    
T  16807718 tagtactctctccgttttaaaatgagtgtcgttttaataaaaaaaattgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16807619  T
Q  690 ttcaattg 697  Q
    ||||||||    
T  16807618 ttcaattg 16807611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 591 - 697
Target Start/End: Complemental strand, 16846999 - 16846892
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctt 689  Q
    |||||||| |||| ||| |||||||||||||||||| | |||| |||||||| ||||| |||||||  || |||||||||| ||||||||| ||||||||    
T  16846999 tagtactctctccgttttaaaatgagtgtcgttttaataaaaaaaattgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16846900  T
Q  690 ttcaattg 697  Q
    ||||||||    
T  16846899 ttcaattg 16846892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 592 - 697
Target Start/End: Original strand, 5717466 - 5717572
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttt 690  Q
    |||||||| ||| ||| ||||||||||||| |||||  |||| || |||||||||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  5717466 agtactccatccgttttaaaatgagtgtcgctttagcaaaaaaaaatgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttt 5717565  T
Q  691 tcaattg 697  Q
    | |||||    
T  5717566 ttaattg 5717572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 608 - 697
Target Start/End: Original strand, 38926576 - 38926665
Alignment:
Q  608 caaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||||| |||| |||||||||||| || ||||||||||    
T  38926576 caaaatgagtgtcgttttag-caaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataacttctttttttcaattg 38926665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 4469467 - 4469560
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||| ||||||||||   ||||  ||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||    
T  4469467 tttcaaaatgaatgtcgttttaacaaaaaacattgttttaaaatgaatttcactttcagttttcaatacaataataactttttcttttcaattg 4469560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 14285908 - 14285997
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||| || |||||| ||||| |||| ||| ||||||||||||| || ||||||||||||||||||||||||||| ||||||||||    
T  14285908 aaaatgagtatcattttagccaaaaaaattatttcaaaatgaatgtcattttcagtttccaatacaataataacttttttttttcaattg 14285997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 18719631 - 18719526
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||||||||  || |||||||||||| |||||| ||||| || ||||||| |||||||||||| || |||||| |||| ||||||||||||||||||||    
T  18719631 tactccctcccctttaaaatgagtgtcattttagccaaaaaaaattgttttgaaatgaatgtcactttcagttttcaatgcaataataactttttctttt 18719532  T
Q  692 caattg 697  Q
    ||||||    
T  18719531 caattg 18719526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 609 - 694
Target Start/End: Complemental strand, 6220588 - 6220501
Alignment:
Q  609 aaaatgagtgtcgttttag-tcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaa 694  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||| ||  |||||||||| |||||||||||||||||||||||    
T  6220588 aaaacgagtgtcgttttaactcaaaaaaattgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaa 6220501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 635 - 697
Target Start/End: Original strand, 45301761 - 45301824
Alignment:
Q  635 aattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  45301761 aattgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 45301824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 609 - 695
Target Start/End: Complemental strand, 7874826 - 7874740
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttcaat 695  Q
    ||||||||||||||||||   |||| |||| ||||||||| ||||||| ||  ||||||||| ||||||||||||||||||||||||    
T  7874826 aaaatgagtgtcgttttacctaaaaaaattattttaaaattaatgtcacttttgtttccaatgcaataataactttttcttttcaat 7874740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 36177941 - 36178035
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||||||||||||  |||| || |||||| ||||||||||||| || | ||||||||| ||||||||||||||| ||||||||||    
T  36177941 tttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttttttttcaattg 36178035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 694
Target Start/End: Complemental strand, 7029009 - 7028909
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| ||||||||||||| |||| |||||| |||||||| ||||||||||||| || || |||||||| ||||||| |||||||||||||    
T  7029009 tactccatccgttttaaaatgagtgtcgattta-tcaaaaaaattgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttcttttc 7028911  T
Q  693 aa 694  Q
    ||    
T  7028910 aa 7028909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 8539992 - 8540097
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||| | ||| ||||||||||| |||||||| |||| || ||||||||||||||||| || || ||||||||| | ||||||||||||||||||||    
T  8539992 tactcccttcgttttaaaatgagtgttgttttagtaaaaaaaaattgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctttt 8540091  T
Q  692 caattg 697  Q
     |||||    
T  8540092 taattg 8540097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 12394120 - 12394015
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||| |||| ||||||||||||||||||||||| | |||| |||||||| ||||||||||| |  ||||||||| ||| ||||||||||||||| ||||    
T  12394120 tactctctccgtttcaaaatgagtgtcgttttaggcaaaaaaaattgtttcaaaatgaatgttactttcagtttctaatgcaataataactttttatttt 12394021  T
Q  692 caattg 697  Q
     |||||    
T  12394020 taattg 12394015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 45082099 - 45081994
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||  ||||||| ||||||||||||||| ||||| || || ||| | ||||||||||| || ||||||||||| ||||||||| ||||||||||    
T  45082099 tactccctcggtttcaaattgagtgtcgttttagccaaaaaaaattatttcacaatgaatgtcactttcagtttccaatgcaataataattttttctttt 45082000  T
Q  692 caattg 697  Q
    ||||||    
T  45081999 caattg 45081994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 25383646 - 25383578
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||    
T  25383646 aaaaaaattgttttaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaattg 25383578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 630 - 697
Target Start/End: Original strand, 43971495 - 43971563
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  43971495 aaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattg 43971563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 22620533 - 22620428
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||||| ||| ||||||||||| | ||||| ||||||||  |||||| ||||||| ||||  || ||||||||||| |||||||||||||||||||    
T  22620533 tactccctccgttttaaaatgagtgttgctttag-caaaataaagttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttcttt 22620435  T
Q  691 tcaattg 697  Q
    |||||||    
T  22620434 tcaattg 22620428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 27964572 - 27964464
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtca---aaataat-tgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttct 688  Q
    |||||||||| |||||||||||||||||||||||  |   ||| ||| |||||  |||||||||||| ||  |||||||||| |||||||||||||||||    
T  27964572 tactccctccgtttcaaaatgagtgtcgttttagcaacaaaaaaaatatgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttct 27964473  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  27964472 tttcaattg 27964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 30855074 - 30855163
Alignment:
Q  609 aaaatgagtgtcgttttagt-caaaataattgttttaaaatgaatgtcaat-tcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||  |||| ||| |||| ||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||    
T  30855074 aaaatgagtgtcgttttagtaaaaaaaaatagtttcaaaatgaatgtcactctcagtttccaatgcaataataa-tttttcttttcaattg 30855163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 693
Target Start/End: Complemental strand, 32228209 - 32228109
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||  ||  ||||  ||| ||||||||||||||||||||    
T  32228209 tactccatccgttttaaaatgagtgtcgttttag-caaaataaattgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttctttt 32228111  T
Q  692 ca 693  Q
    ||    
T  32228110 ca 32228109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 36685923 - 36685834
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||| || |||||||||| ||||| | |||||||||||||||||| | || || |||| ||||||||||||| ||||||||||||||||    
T  36685923 aaaatcagcgtcgttttagccaaaaaatttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattg 36685834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 697
Target Start/End: Complemental strand, 4051901 - 4051797
Alignment:
Q  596 ctccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataa-ctttttcttttc 692  Q
    |||||||| ||| ||||||| ||||  ||||||||||| || |||||| ||||||||||||| || ||||||||||| |||||||||  |||||||||||    
T  4051901 ctccctccgttttaaaatgattgtcactttagtcaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttcttttc 4051802  T
Q  693 aattg 697  Q
    |||||    
T  4051801 aattg 4051797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 600 - 690
Target Start/End: Original strand, 17702979 - 17703071
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||| ||||||||||||||||| ||||   ||||||||| |||||||||||||||||| || || ||| |||| |||||||||||||||||||    
T  17702979 ctccgtttcaaaatgagtgtcgctttaacaaaaataatttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttt 17703071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 608 - 697
Target Start/End: Complemental strand, 4288896 - 4288805
Alignment:
Q  608 caaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||| | ||||||||||||||||| || |||||| ||||||||| ||| || ||||||| ||| ||||||||| ||||||||||||||||    
T  4288896 caaaataaatgtcgttttagtcaaaaaaaattgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttcttttcaattg 4288805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 691
Target Start/End: Complemental strand, 7042383 - 7042286
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||| |||||||||| ||||||| |||||| |||||||| |||||||||||||  |||| || ||||| ||||||| ||||||||||||    
T  7042383 tactccatccgttttaaaatgagtgccgtttta-tcaaaaaaattgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctttt 7042286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 691
Target Start/End: Original strand, 28072558 - 28072620
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||| ||||    
T  28072558 aaaaaaattgttttaaaatgaatgtcactttcagttttcaatacaataataactttttttttt 28072620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 34225728 - 34225790
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||| | ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  34225728 tactcccttcgtttcaaaatgagtgtcgctttagccaaaaaaattgtttcaaaatgaatgtca 34225790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 38809567 - 38809629
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtc 655  Q
    |||||||||| ||||||||||||||||||||||| | |||| |||||||| ||||||||||||    
T  38809567 tactccctccatttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtc 38809629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 42004861 - 42004950
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||| ||||| | |||| |||| |||||||||||||||||  || | |||||||| ||||||||| ||||| ||||||||||    
T  42004861 aaaatgagtgtcattttaataaaaaaaattattttaaaatgaatgtcatttttaatttccaatgcaataataattttttattttcaattg 42004950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 586 - 697
Target Start/End: Complemental strand, 4658438 - 4658327
Alignment:
Q  586 ttttttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataacttt 684  Q
    ||||||| || ||| ||| ||||||||||| | ||||||||| ||||| |||||||| ||||||||||||  || || ||| ||||  |||||||| |||    
T  4658438 ttttttactattccatccgtttcaaaatgattatcgttttagccaaaa-aattgtttcaaaatgaatgtctttttcatttttcaatgtaataataatttt 4658340  T
Q  685 ttcttttcaattg 697  Q
    |||||||||||||    
T  4658339 ttcttttcaattg 4658327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 11188689 - 11188586
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||| |||||||||||| |||||| ||||| |||| ||| |||||||||||||  |||||||| |||| ||| |||||||| || |||||    
T  11188689 tactccttccgttttaaaatgagtgtcattttag-caaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaacaataacttatttttttc 11188591  T
Q  693 aattg 697  Q
    |||||    
T  11188590 aattg 11188586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 12566142 - 12566074
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||||||||||| || ||||||||||| ||||||||| ||||| ||||||||||    
T  12566142 aaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattg 12566074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 697
Target Start/End: Original strand, 18579158 - 18579226
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||||||||||| || |||||| |||| ||||||||| ||||||||||||||||    
T  18579158 aaaagaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattg 18579226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 6247675 - 6247738
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||| ||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  6247675 tactccctccgttttaaaatgagtgtcgttttcgccaaaaaaaattgttttaaaatgaatgtca 6247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 588 - 697
Target Start/End: Original strand, 35799151 - 35799261
Alignment:
Q  588 ttttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttt 685  Q
    ||||| |||||||||  ||| ||||||| |||| ||||||  |||| || |||||| ||||| ||||||| || ||||||||||| ||||||||||||||    
T  35799151 ttttactactccctctgttttaaaatgaatgtcattttagcaaaaaaaaattgtttcaaaataaatgtcactttcagtttccaatgcaataataactttt 35799250  T
Q  686 tcttttcaattg 697  Q
    | ||||||||||    
T  35799251 t-ttttcaattg 35799261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 4840924 - 4840862
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||| ||| |||||||||||||||||||||||  |||| |||||||  |||||||||||||    
T  4840924 tactccatccgtttcaaaatgagtgtcgttttagaaaaaaaaattgttccaaaatgaatgtca 4840862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 15083342 - 15083246
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtc---aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||| |||||||||||||||   |||| ||||||||  ||| |||||| | || ||||||||||| |||||||||| |||| ||||||||||    
T  15083342 tttcaaaataagtgtcgttttagtccaaaaaaaaattgtttcgaaaagaatgttattttcagtttccaatgcaataataacattttattttcaattg 15083246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 43388855 - 43388793
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtc 655  Q
    |||||||||| |||||||||||||||| |||||| ||||| || |||||| ||||||||||||    
T  43388855 tactccctccgtttcaaaatgagtgtcattttagccaaaaaaatttgtttcaaaatgaatgtc 43388793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 693
Target Start/End: Complemental strand, 36106582 - 36106497
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttca 693  Q
    ||||||||| | |||||||  |||| |||||||||||||||||||||| ||  | |||||||| ||||  ||||||||||||||||    
T  36106582 aaaatgagtattgttttagcaaaaaaaattgttttaaaatgaatgtcacttttgttttccaatgcaatgctaactttttcttttca 36106497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 655
Target Start/End: Complemental strand, 776081 - 776021
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtc 655  Q
    ||||| ||| ||||||||||||||||| |||||  |||| |||||||| ||||||||||||    
T  776081 actccatccgtttcaaaatgagtgtcgctttagcaaaaaaaattgtttcaaaatgaatgtc 776021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 642 - 697
Target Start/End: Original strand, 7644649 - 7644705
Alignment:
Q  642 ttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||| || |||| | ||||| |||||||||||||||||||||||||    
T  7644649 ttaaaatgaatgtcactttcagtattcaatataataataactttttcttttcaattg 7644705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 610 - 689
Target Start/End: Complemental strand, 14833917 - 14833837
Alignment:
Q  610 aaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctt 689  Q
    |||| ||||||| |||||  |||| ||||||||||||||||||||||  |||| ||| |||| ||| ||||||||||||||    
T  14833917 aaataagtgtcgctttagctaaaacaattgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 600 - 656
Target Start/End: Complemental strand, 43344412 - 43344356
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||| |||||||||||||||| ||||||  |||| |||||||| |||||||||||||    
T  43344412 ctccgtttcaaaatgagtgtcattttagcaaaaaaaattgtttcaaaatgaatgtca 43344356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 658 - 694
Target Start/End: Original strand, 45423638 - 45423674
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaa 694  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45423638 ttcagtttccaatgcaataataactttttcttttcaa 45423674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 4536528 - 4536591
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||  ||||| | |||| |||||||| |||||||||||||    
T  4536528 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtca 4536591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 697
Target Start/End: Complemental strand, 16463165 - 16463126
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  16463165 ttcagttttcaatgcaataataactttttcttttcaattg 16463126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 697
Target Start/End: Original strand, 29411692 - 29411755
Alignment:
Q  635 aattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||||||  || ||||| |||| |||||||||| ||||||||| |||||    
T  29411692 aattgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctttttaattg 29411755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 656
Target Start/End: Complemental strand, 34035930 - 34035883
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||| |||||||||| ||||| |||| |||||||||||||||||    
T  34035930 aaaatgagagtcgttttagccaaaaaaattattttaaaatgaatgtca 34035883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 9366317 - 9366255
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||| ||| ||| ||||| |||||||||||||  |||| |||||||||||||| |||||||    
T  9366317 tactccatccattttaaaataagtgtcgttttagcaaaaaaaattgttttaaaataaatgtca 9366255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 14378421 - 14378359
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||| ||| ||||||||||||||||| |||||  |||| || | |||||||||||||||||    
T  14378421 tactccttccgtttcaaaatgagtgtcgctttagcaaaaaaaaatattttaaaatgaatgtca 14378359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 24775140 - 24775206
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    ||||||||||||| ||||| |||||||||| ||| || ||||| || |||||||||||||| |||||    
T  24775140 tagtactccctccgtttcataatgagtgtcatttgagccaaaaaaatttgttttaaaatgattgtca 24775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 630 - 691
Target Start/End: Original strand, 27986027 - 27986088
Alignment:
Q  630 aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||| ||||||||||||||||||||||  |||||||| ||||||||||| |||||||| ||||    
T  27986027 aaaaaaattgttttaaaatgaatgtcactttcagttttcaatacaataa-aactttttttttt 27986088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 696
Target Start/End: Complemental strand, 37038949 - 37038864
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||| || |||||  | ||| ||||||||||||||||||||||  |||||||| |||| |   |||||||||||||||||||||    
T  37038949 aaaatgagtatcattttaccccaaaaaattgttttaaaatgaatgtcactttcagttttcaatgc---aataactttttcttttcaatt 37038864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 441143 - 441176
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  441143 tactccctccgtttcaaaatgagtgtcgttttag 441176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 681961 - 681898
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||  |||| |||||||||  |||||| |||||||||||||    
T  681961 tactccctccatttcaaaatgagtgtctcttta-tcaaaataaatttgtttgaaaatgaatgtca 681898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 10195545 - 10195633
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||| ||||||  ||||| |||||||||||||||||||| |  || | ||| |||| |||||||||| |||| ||||||||||    
T  10195545 aaaatgagtgtggttttaa-caaaaaaattgttttaaaatgaatgttacttttaattttcaatgcaataataacattttattttcaattg 10195633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 592 - 624
Target Start/End: Original strand, 681677 - 681709
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttt 624  Q
    |||||||||||| ||||||||||||||||||||    
T  681677 agtactccctccgtttcaaaatgagtgtcgttt 681709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 599 - 697
Target Start/End: Complemental strand, 9835 - 9735
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||| ||||||||||| ||||||||||| ||||| || |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  9835 cctccgtttcaaaatgactgtcgttttagccaaaaaaaattgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaatt 9736  T
Q  697 g 697  Q
    |    
T  9735 g 9735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 9572 - 9605
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  9572 tactccctccgtttcaaaatgagtgtcgttttag 9605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 8e-26; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 1741946 - 1742050
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||||||||||||||||||||||| | ||| | |||||| |||||||||||||  ||||||||||||| |||||||||| ||||||||||    
T  1741946 tactccctccgtttcaaaatgagtgtcgttttagcccaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttcttttc 1742045  T
Q  693 aattg 697  Q
    |||||    
T  1742046 aattg 1742050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 592 - 694
Target Start/End: Original strand, 22297950 - 22298052
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||| ||| ||| ||||||||||||||||||| ||||| |||||||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  22297950 agtactccatccgttttaaaatgagtgtcgttttag-caaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttt 22298048  T
Q  691 tcaa 694  Q
    ||||    
T  22298049 tcaa 22298052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 589 - 697
Target Start/End: Complemental strand, 12977888 - 12977778
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataacttttt 686  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||| || |||||| ||||||||||||| || || |||||||| |||||||||||||||    
T  12977888 tttactactccctcctttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataacttttt 12977789  T
Q  687 cttttcaattg 697  Q
    |||||||||||    
T  12977788 cttttcaattg 12977778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 592 - 697
Target Start/End: Complemental strand, 19105201 - 19105093
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttag--tcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttct 688  Q
    |||||||||||| |||||||||||||||||||||||    |||| ||||||||||||||||||||||  ||||||||  ||| |||||||||||||||||    
T  19105201 agtactccctccatttcaaaatgagtgtcgttttagcaaaaaaaaaattgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttct 19105102  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  19105101 tttcaattg 19105093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 27947699 - 27947593
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||||||| |||||||||||||||||||||||  |||| ||  |||| ||||||||||||||| || |||||| |||| |||||||||||||||||||    
T  27947699 tactccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaaattgtcttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttt 27947600  T
Q  691 tcaattg 697  Q
    |||||||    
T  27947599 tcaattg 27947593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 601 - 697
Target Start/End: Complemental strand, 21752300 - 21752203
Alignment:
Q  601 tccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| |||||||||||||| |||| ||||| || ||||| ||||||| || ||||||||||| |||||||||||||||| |||||||||    
T  21752300 tccttttcaaaataagtgtcgttttagtaaaaaaaattggttcaaaataaatgtcattttcagtttccaatgcaataataactttttcgtttcaattg 21752203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 42285877 - 42285966
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||| |||||||||||||||    
T  42285877 aaaatgagtgtcgtttttgacaaaaataattgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaatt 42285966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 589 - 697
Target Start/End: Original strand, 18292283 - 18292394
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtc--aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttt 685  Q
    |||| |||||||||| ||||||||||||||||| ||||| |  |||| |||||||| |||||||||||||  |||| |||||||| ||||||||||||||    
T  18292283 tttactactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttt 18292382  T
Q  686 tcttttcaattg 697  Q
    || |||||||||    
T  18292383 tcctttcaattg 18292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 599 - 697
Target Start/End: Complemental strand, 716054 - 715955
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||| ||| ||||||||||||| ||||| ||||| | |||||| ||||||||||||| || ||||||||||| ||||||||| ||||||||||||||||    
T  716054 cctccgttttaaaatgagtgtcgctttagccaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattg 715955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 45948828 - 45948722
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    |||||| ||| ||| |||||||||||||||||||  |||| ||  |||||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  45948828 tactccttccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttt 45948729  T
Q  691 tcaattg 697  Q
    |||||||    
T  45948728 tcaattg 45948722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 628 - 697
Target Start/End: Original strand, 24680117 - 24680187
Alignment:
Q  628 tcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  24680117 tcaaaaaaattgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattg 24680187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 44567238 - 44567133
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||| |||||| |||||| ||||||||||| || ||||||||||||||||||||  |||| ||| |||| ||||||||| ||||||||||    
T  44567238 tactccctccgttttaaaatgggtgtcgctttagtcaaaaaaatttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttctttt 44567139  T
Q  692 caattg 697  Q
    ||||||    
T  44567138 caattg 44567133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 10599168 - 10599272
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||||||| ||| ||||||||||||||||||   |||| || ||||| ||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  10599168 tactccctccgttttaaaatgagtgtcgttttaacaaaaaaaaatgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttc 10599267  T
Q  693 aattg 697  Q
    |||||    
T  10599268 aattg 10599272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 609 - 697
Target Start/End: Complemental strand, 13405310 - 13405219
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||||||||||||||| |||| ||  |||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||    
T  13405310 aaaacgagtgtcgttttagttaaaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttcttttcaattg 13405219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 34012117 - 34012220
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    ||||| |||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||  || ||||||||||  | |||||||||||| |||||    
T  34012117 tactcactccgttttaaaatgagtgtcgttttagccaaaa-aattgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttttttttc 34012215  T
Q  693 aattg 697  Q
    |||||    
T  34012216 aattg 34012220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 599 - 696
Target Start/End: Complemental strand, 24780497 - 24780399
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||| ||| |||||||||||||||||| | |||| |||||||| |||||||||||||  ||||||||| ||| ||||||||| ||||| |||||||||    
T  24780497 cctccattttaaaatgagtgtcgttttaataaaaaaaattgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttattttcaatt 24780399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 591 - 696
Target Start/End: Original strand, 37502271 - 37502377
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctt 689  Q
    ||||||||| ||| |||||||||||||||||||||||  |||| ||    || |||||||| |||| || ||||||||||| ||||||||||||||||||    
T  37502271 tagtactccatccgtttcaaaatgagtgtcgttttagctaaaacaaaaaattcaaaatgaacgtcactttcagtttccaatgcaataataactttttctt 37502370  T
Q  690 ttcaatt 696  Q
    |||||||    
T  37502371 ttcaatt 37502377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 695
Target Start/End: Original strand, 8603928 - 8604032
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataat--tgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttt 690  Q
    ||||| |||| ||| ||||||||||||||||||| || || |||  |||||||||||||| |||| || || |||||||| |||||||||||||||||||    
T  8603928 tactctctccgttttaaaatgagtgtcgttttagccataaaaatattgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttcttt 8604027  T
Q  691 tcaat 695  Q
    |||||    
T  8604028 tcaat 8604032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 37815693 - 37815782
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaatt 696  Q
    |||||||||||||||||| |||||| || |||||| ||||||||||||  || || |||||||||||||||||| |||||||||||||||    
T  37815693 aaaatgagtgtcgttttaatcaaaaaaaattgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaatt 37815782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 44453089 - 44453194
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaata-attgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||| |||||||||||||||||| |||||| | ||| |||| |||||||||||| || ||||||||||| ||||||||||||| | ||||    
T  44453089 tactccatccattttaaaatgagtgtcgttttaatcaaaaaatattatttttaaatgaatgtcactttcagtttccaatgcaataataactttctttttt 44453188  T
Q  692 caattg 697  Q
    ||||||    
T  44453189 caattg 44453194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 595 - 695
Target Start/End: Original strand, 23935376 - 23935479
Alignment:
Q  595 actccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    ||||| ||| ||| |||||||||||||||||||  |||| ||  |||||||||||| ||||||  || ||||||||||| ||||||||||||||||||||    
T  23935376 actccatccgttttaaaatgagtgtcgttttaggaaaaaaaaaattgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttctttt 23935475  T
Q  692 caat 695  Q
    ||||    
T  23935476 caat 23935479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 697
Target Start/End: Original strand, 37490735 - 37490843
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttct 688  Q
    ||||||||| ||| ||||||||||||||| ||||| | ||||| || |||| | ||||||||||||| || |||||| |||| ||||||||| |||||||    
T  37490735 tagtactccatccgtttcaaaatgagtgttgtttttgccaaaaaaaattgtatcaaaatgaatgtcactttcagttttcaatgcaataataattttttct 37490834  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  37490835 tttcaattg 37490843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 594 - 685
Target Start/End: Original strand, 6747180 - 6747274
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagt--caaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttt 685  Q
    |||||||||| ||||||||||||||||| ||||||   |||| |||||||| |||| ||||||||  ||||||||||||| ||||||||||||||    
T  6747180 tactccctccgtttcaaaatgagtgtcgctttagtaaaaaaaaaattgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 599 - 691
Target Start/End: Original strand, 2296997 - 2297091
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||| ||||||||||||||||| ||||| | |||| |||||||| |||||||||||||  |||||||| |||| |||||||| |||||||||||    
T  2296997 cctccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttctttt 2297091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 10476108 - 10476195
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||||   ||||  ||| ||||||||||||||||| || || |||||||| ||||||||||||||||||||||||||    
T  10476108 aaaatgagtgtcgttttaactaaaa--attattttaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattg 10476195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 34274759 - 34274853
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||| ||||| ||||  |||| |||| ||||||||||||| || ||||||||||| |||||||||| ||||||||| |||||    
T  34274759 tttcaaaatgagtgtcgctttagccaaacaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctttttaattg 34274853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 596 - 697
Target Start/End: Original strand, 41137685 - 41137787
Alignment:
Q  596 ctccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattc-agtttccaatacaataataactttttcttttcaa 694  Q
    |||||||| ||| ||||||||||||||||||   |||| |||||||| | |||||||| || ||  |||||||||| ||||||||| |||||||||||||    
T  41137685 ctccctccgttttaaaatgagtgtcgttttaccaaaaaaaattgtttcacaatgaatgccacttttagtttccaatgcaataataattttttcttttcaa 41137784  T
Q  695 ttg 697  Q
    |||    
T  41137785 ttg 41137787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 25440836 - 25440931
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||| |||||  |||| ||  || |||||||||  |||||| || ||||||||||| ||||||||||||||||||||||||||    
T  25440836 tttcaaaatgagtgtcgctttagcaaaaaaaaaattattttaaaatatatgtcactttcagtttccaatgcaataataactttttcttttcaattg 25440931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 27935735 - 27935826
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||| ||||||||||||| |||| ||  |||||||||||||||||||| || |||||| |||| ||||||||||||||| | ||||||||    
T  27935735 aaaatgggtgtcgttttagttaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttatcttcaattg 27935826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 591 - 697
Target Start/End: Original strand, 40339410 - 40339517
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttct 688  Q
    ||||||||||||| ||| ||||||||||||||||||| | |||| |||||||| ||||||| |||||  |||| ||| |||| ||||||||||||| | |    
T  40339410 tagtactccctccgttttaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgactgtcactttcaattttcaatgcaataataactttat-t 40339508  T
Q  689 tttcaattg 697  Q
    |||||||||    
T  40339509 tttcaattg 40339517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 652
Target Start/End: Complemental strand, 32097352 - 32097297
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaat 652  Q
    ||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  32097352 tccctccgttttaaaatgagtgtcgttttagtaaaaaaaattgttttaaaatgaat 32097297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 44057797 - 44057734
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagt-caaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  44057797 tactccctccgtttcaaaatgagtgtcgttttagtaaaaaaaaattgtttcaaaatgaatgtca 44057734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 694
Target Start/End: Complemental strand, 45500013 - 45499922
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaa 694  Q
    ||||||||||||||||||||||| ||||| || |||||| ||||||||| |||  ||||||||||||| | |||||||  ||||||||||||    
T  45500013 tttcaaaatgagtgtcgttttagccaaaagtagttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttcttttcaa 45499922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 590 - 656
Target Start/End: Complemental strand, 28044333 - 28044267
Alignment:
Q  590 ttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||||||| || || ||||||||||||||||  |||||| |||| ||||||||||||||||||||||    
T  28044333 ttagtacttccaccgtttcaaaatgagtgtcactttagtaaaaaaaattgttttaaaatgaatgtca 28044267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 696
Target Start/End: Complemental strand, 8334466 - 8334365
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttagtcaaa-ataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaa 694  Q
    ||||||| |||||||||||||||||||| || |||| | |||||||| ||||| |||||||  |||| |||||||| ||||||||| |||| || |||||    
T  8334466 tccctccgtttcaaaatgagtgtcgtttaagccaaacaaaattgtttcaaaatcaatgtcactttcattttccaatccaataataaattttcctattcaa 8334367  T
Q  695 tt 696  Q
    ||    
T  8334366 tt 8334365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 599 - 655
Target Start/End: Original strand, 36836019 - 36836076
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtc 655  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  36836019 cctccgtttcaaaatgagtgtcgctttagtcaaaataatttgtttcaaaatgaatgtc 36836076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 29531095 - 29531027
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||||||||| |||||||||||| || |||||| |||| ||||||||| ||||||||||||||||    
T  29531095 aaaaaaattgttttgaaatgaatgtcattttcagttttcaatgcaataataattttttcttttcaattg 29531027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 42880094 - 42880026
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||| ||||||||||||| || |||||| ||||  |||||||||||||||||||||||||    
T  42880094 aaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttcttttcaattg 42880026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 697
Target Start/End: Complemental strand, 31418644 - 31418605
Alignment:
Q  658 ttcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  31418644 ttcagtttccaatgcaataataactttttcttttcaattg 31418605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 635 - 697
Target Start/End: Original strand, 36807931 - 36807994
Alignment:
Q  635 aattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||||||| ||||||| ||  | ||| |||||||||||||||||||||||||||||||    
T  36807931 aattgttttaaaataaatgtcattttcgcttttcaatacaataataactttttcttttcaattg 36807994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 697
Target Start/End: Original strand, 30312459 - 30312517
Alignment:
Q  640 ttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||||||| || | |||| |||||||||||||| ||||||||||||||||    
T  30312459 ttttaaaatgaatgtcactttcggttttcaatacaataataattttttcttttcaattg 30312517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 644 - 697
Target Start/End: Original strand, 48684728 - 48684782
Alignment:
Q  644 aaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| || | ||||||||| ||||||||||||||||||||||||||    
T  48684728 aaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattg 48684782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 593 - 697
Target Start/End: Original strand, 21819239 - 21819342
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttctttt 691  Q
    ||||||| ||| ||||||||||||||||||||||  | ||| |||||||| |||||||| || |  |||||||| |||||||||||||| || || ||||    
T  21819239 gtactccatccatttcaaaatgagtgtcgtttta-actaaaaaattgtttcaaaatgaaagttattttcagttttcaatacaataataaattctt-tttt 21819336  T
Q  692 caattg 697  Q
    ||||||    
T  21819337 caattg 21819342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 697
Target Start/End: Complemental strand, 24133283 - 24133222
Alignment:
Q  637 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||||| |||| |||| || ||||||||||| ||||||||| ||||||||||||||||    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttcttttcaattg 24133222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 31930057 - 31929952
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||| ||||| ||||||| ||||| ||||| || || ||||||||||||| | | || |||||| |||| ||||||||| ||||||||||    
T  31930057 tactccatccgttttaaaataagtgtcgctttagacaaaaaaaattattttaaaatgaatattattttcagttttcaatgcaataataattttttctttt 31929958  T
Q  692 caattg 697  Q
    ||||||    
T  31929957 caattg 31929952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 45933772 - 45933680
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa---ttgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||| |||||||||||||| |||| ||   ||||||||||||||||||||  |||||||| |||| ||||||    ||||||||||||||||    
T  45933772 tttcaaaataagtgtcgttttagtaaaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataa----tttttcttttcaattg 45933680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 687
Target Start/End: Original strand, 18270546 - 18270626
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttc 687  Q
    ||||||| ||||  ||||||||||| |||| | || ||||||||||||| || ||||||||||| ||||||||||||||||    
T  18270546 aaaatgaatgtcactttagtcaaaaaaatttggttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 32346035 - 32345972
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa--ttgttttaaaatgaatgtc 655  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||  |||||| ||||||||||||    
T  32346035 tactccatccgtttcaaaatgagtgtcgttttagccaaaaaaaatttgtttcaaaatgaatgtc 32345972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 33939894 - 33939826
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaattcag-tttccaatacaataataactttttcttttcaattg 697  Q
    |||| |||||||||||||||||||||| ||  | ||||||||  |||||||||||||||||| ||||||    
T  33939894 aaaaaaattgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctttccaattg 33939826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 39557292 - 39557380
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||||||||   |||| |||| ||||||||| |||||||  |||||||| ||||  |||||||| ||||||| |||||||    
T  39557292 aaaatgagtgtcgttttaactaaaaaaattattttaaaataaatgtcactttcagttttcaatgtaataataattttttctcttcaatt 39557380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 630 - 697
Target Start/End: Complemental strand, 40753588 - 40753520
Alignment:
Q  630 aaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    |||| ||||||| |||||||||||||| || |||||| ||||  |||||||| ||||||||||||||||    
T  40753588 aaaaaaattgttataaaatgaatgtcattttcagttttcaatgtaataataattttttcttttcaattg 40753520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 637 - 696
Target Start/End: Original strand, 48843550 - 48843610
Alignment:
Q  637 ttgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttcaatt 696  Q
    ||||||||||||||||||||  |||||||| |||| ||||||||| ||||||| |||||||    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctcttcaatt 48843610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 697
Target Start/End: Original strand, 1031151 - 1031214
Alignment:
Q  635 aattgttttaaaatgaatgtcaa-ttcagtttccaatacaataataactttttcttttcaattg 697  Q
    |||||||| |||||||||||||  ||||||||||| | |||||||||| |||| ||||||||||    
T  1031151 aattgtttcaaaatgaatgtcaccttcagtttccattgcaataataacattttattttcaattg 1031214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 655
Target Start/End: Original strand, 4268568 - 4268627
Alignment:
Q  597 tccctccttttcaaaatgagtgtcgttttagtcaaaa-taattgttttaaaatgaatgtc 655  Q
    ||||||| ||| ||||||||||||||||||| |||||  |||||||| ||||||||||||    
T  4268568 tccctccgttttaaaatgagtgtcgttttagacaaaagaaattgtttcaaaatgaatgtc 4268627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 683
Target Start/End: Complemental strand, 32501946 - 32501855
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgtttt-agtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactt 683  Q
    |||||||||| ||| ||||||||||||||||| |   |||| |||||||||||||| ||| |||  |||||||| |||| ||||||||||||    
T  32501946 tactccctccattttaaaatgagtgtcgttttaacaaaaaaaaattgttttaaaataaatatcactttcagttttcaatgcaataataactt 32501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 656
Target Start/End: Complemental strand, 36447257 - 36447206
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||||||||| |||||  |||| |||||||| |||||||||||||    
T  36447257 tttcaaaatgagtgtcgctttagctaaaaaaattgtttcaaaatgaatgtca 36447206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 40298802 - 40298865
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||  ||||| | |||| |||||||| |||||||||||||    
T  40298802 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtca 40298865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 627
Target Start/End: Complemental strand, 40299081 - 40299046
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||||| |||||||||||||||||||||||    
T  40299081 agtactccctccgtttcaaaatgagtgtcgttttag 40299046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 40799945 - 40800008
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||  |||||  ||||||| |||||| |||||||||||||    
T  40799945 tactccctccgtttcaaaatgagtgtcactttagcaaaaataatttgtttcaaaatgaatgtca 40800008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 695
Target Start/End: Original strand, 42753706 - 42753765
Alignment:
Q  637 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaat 695  Q
    |||||| ||||||||||||| || || |||||||||||||||||||  ||||||||||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataacactttcttttcaat 42753765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 627
Target Start/End: Original strand, 48684669 - 48684704
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||||| |||||||||||||||||||||||    
T  48684669 agtactccctccatttcaaaatgagtgtcgttttag 48684704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 30514928 - 30514994
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt 659  Q
    |||||||||| |||||||| | || ||||||||| ||||| || |||||| ||||||||||||||||    
T  30514928 tactccctccgtttcaaaaggtgtatcgttttagccaaaaaaaattgtttcaaaatgaatgtcaatt 30514994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 36912062 - 36912124
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtc 655  Q
    |||||||||| ||||||||||||||||| |||||  |||| || |||||| ||||||||||||    
T  36912062 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaatttgtttcaaaatgaatgtc 36912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 677
Target Start/End: Original strand, 47187702 - 47187744
Alignment:
Q  635 aattgttttaaaatgaatgtcaattcagtttccaatacaataa 677  Q
    |||||||||||| ||||||||| |||||||| |||||||||||    
T  47187702 aattgttttaaagtgaatgtcatttcagttttcaatacaataa 47187744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 10685018 - 10684969
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatg 653  Q
    ||||||||||||||||| ||||| |||||||| |||||| ||||||||||    
T  10685018 tttcaaaatgagtgtcgctttagccaaaataatttgtttcaaaatgaatg 10684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 656
Target Start/End: Complemental strand, 19288548 - 19288483
Alignment:
Q  592 agtactccctccttttcaaaatgagtgtcgttttagt-caaaataattgttttaaaatgaatgtca 656  Q
    |||||||||||| ||||||||||||||||  ||||||  |||| |||| ||| |||||||||||||    
T  19288548 agtactccctccgtttcaaaatgagtgtcactttagtaaaaaaaaattatttcaaaatgaatgtca 19288483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 627
Target Start/End: Original strand, 31929780 - 31929813
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttag 627  Q
    |||||||||| |||||||||||||||||||||||    
T  31929780 tactccctccatttcaaaatgagtgtcgttttag 31929813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 656
Target Start/End: Complemental strand, 35850608 - 35850559
Alignment:
Q  608 caaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||||||||||||||||||| | |||| |||||||| |||||||||||||    
T  35850608 caaaatgagtgtcgttttagacaaaaaaaattgtttcaaaatgaatgtca 35850559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 609 - 680
Target Start/End: Original strand, 7759232 - 7759304
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataa 680  Q
    ||||| |||||||||||||| |||| || | |||||||| ||||||||  |||||||| ||||| ||||||||    
T  7759232 aaaattagtgtcgttttagtaaaaaaaaatattttaaaaggaatgtcattttcagttttcaatataataataa 7759304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 593 - 656
Target Start/End: Original strand, 18733407 - 18733471
Alignment:
Q  593 gtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    ||||||| ||| ||| ||||||||||||| ||||| | |||| |||||||| |||||||||||||    
T  18733407 gtactccatccgttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtca 18733471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 19906368 - 19906431
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc--aaaataattgttttaaaatgaatgtc 655  Q
    |||||||||| ||||||||||||||| | ||||| |  |||| |||||||| ||||||||||||    
T  19906368 tactccctccgtttcaaaatgagtgttgctttagccaaaaaaaaattgtttcaaaatgaatgtc 19906431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 589 - 656
Target Start/End: Original strand, 22597180 - 22597248
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtca 656  Q
    |||| ||||| |||| ||||||||||||||||  ||||| ||||| || |||||| |||||||||||||    
T  22597180 tttactactctctccgtttcaaaatgagtgtcactttagccaaaagaatttgtttcaaaatgaatgtca 22597248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 596 - 656
Target Start/End: Complemental strand, 30393045 - 30392985
Alignment:
Q  596 ctccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca 656  Q
    |||| ||||||| |||||||||||||||| ||  ||||||| ||||| ||||| |||||||    
T  30393045 ctccttcctttttaaaatgagtgtcgtttcagcaaaaataaatgtttaaaaataaatgtca 30392985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 639 - 686
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  639 gttttaaaatgaatgtcaatt-cagtttccaatacaataataacttttt 686  Q
    |||| ||||||||||||| || ||||||||||| |||||||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 589 - 633
Target Start/End: Complemental strand, 42044183 - 42044139
Alignment:
Q  589 tttagtactccctccttttcaaaatgagtgtcgttttagtcaaaa 633  Q
    |||| |||||||||| ||||||||||||||||| |||| ||||||    
T  42044183 tttattactccctccgtttcaaaatgagtgtcgctttaatcaaaa 42044139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 24939 - 24834
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||| ||| ||||||||||||||||||||||  ||||| || |||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  24939 tactccatccgtttcaaaatgagtgtcgttttatccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctttt 24840  T
Q  692 caattg 697  Q
    ||||||    
T  24839 caattg 24834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 588 - 697
Target Start/End: Complemental strand, 1617 - 1507
Alignment:
Q  588 ttttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataacttttt 686  Q
    ||||| ||||| |||  ||||||||| |||||||||||| |||||| |||||||| |||||||||||||  ||||||||| ||| |||| ||||||||||    
T  1617 ttttattactctctctgtttcaaaataagtgtcgttttaatcaaaaaaattgtttcaaaatgaatgtcactttcagtttctaatgcaatgataacttttt 1518  T
Q  687 cttttcaattg 697  Q
    |||||||||||    
T  1517 cttttcaattg 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 711 - 607
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataactttttcttttc 692  Q
    |||||| ||| ||||||||||| ||||||||||| |||||  ||| |||||||||||||||||  ||||||||||||| ||||||||| ||||||||| |    
T  711 tactccatccgtttcaaaatgaatgtcgttttagccaaaaatattattttaaaatgaatgtcactttcagtttccaatgcaataataattttttctttac 612  T
Q  693 aattg 697  Q
    |||||    
T  611 aattg 607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 605 - 697
Target Start/End: Complemental strand, 18442 - 18348
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||| |||||||||||||| |||| || ||| || ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  18442 tttcaaaataagtgtcgttttagtaaaaaaaaattggttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattg 18348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 4009 - 3904
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataatt-gttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| |||||||||||||| || |||||  |||| |||| |||| ||||||||||||| || |||||| |||| ||||||||||||||||||||    
T  4009 tactccctccgtttcaaaatgagtgccgctttagcaaaaaaaatttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctttt 3910  T
Q  692 caattg 697  Q
    ||||||    
T  3909 caattg 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 883 - 780
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttc 692  Q
    |||||||| | ||||||||||| ||||||||||| ||||| |||||||| | ||||||||||| || ||||||||| |  |||||||| |||||||||||    
T  883 tactcccttcgtttcaaaatgaatgtcgttttag-caaaaaaattgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttc 785  T
Q  693 aattg 697  Q
    |||||    
T  784 aattg 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 62598 - 62692
Alignment:
Q  605 tttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||||||||||| |||||||||| |||| || |||||| ||||||||||||| || |||||||| ||  ||||||||||||||||||| |||||    
T  62598 tttcaaaatgagtatcgttttagtaaaaaaaaattgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctttttaattg 62692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 585 - 697
Target Start/End: Complemental strand, 21289 - 21175
Alignment:
Q  585 cttttttagtactccctccttttcaaaatgagtgtcgttttagtcaaaataa-ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataact 682  Q
    ||||| || |||||| ||| ||| |||||||||||||||||| | |||| || || ||||||||||| ||||| || ||||||| ||| ||||||||| |    
T  21289 cttttataatactccatccgttttaaaatgagtgtcgttttaataaaaaaaaattattttaaaatgactgtcactttcagtttcaaatgcaataataatt 21190  T
Q  683 ttttcttttcaattg 697  Q
    |||||||||||||||    
T  21189 ttttcttttcaattg 21175  T

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Target: scaffold0047 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 70653 - 70590
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||||||||| ||||||||||||||||||||||| | |||| |||||||| |||||||||||||    
T  70653 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtca 70590  T

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Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 697
Target Start/End: Original strand, 4094 - 4200
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataat-tgttttaaaatgaatgtcaatt--cagtttccaatacaataataactttttcttt 690  Q
    |||||| ||| ||||||||||| ||||||||||  ||||| ||| | ||||||||||||||||| ||  || ||| |||| ||||||||| |||||||||    
T  4094 tactccatccgtttcaaaatgaatgtcgttttaaccaaaaaaatatattttaaaatgaatgtcatttttcaattttcaatgcaataataattttttcttt 4193  T
Q  691 tcaattg 697  Q
    |||||||    
T  4194 tcaattg 4200  T

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Target: scaffold0502 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 697
Target Start/End: Complemental strand, 770 - 665
Alignment:
Q  594 tactccctccttttcaaaatgagtgtcgttttagtcaaaataat-tgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctttt 691  Q
    |||||||||| ||| || || |||||||||||||  |||| ||  | ||||||||||||||||| || || |||||||| ||||||||||||||||||||    
T  770 tactccctccgttttaagattagtgtcgttttagcaaaaaaaaaatattttaaaatgaatgtcacttacaatttccaatgcaataataactttttctttt 671  T
Q  692 caattg 697  Q
     |||||    
T  670 taattg 665  T

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Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 609 - 697
Target Start/End: Original strand, 9422 - 9504
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaattcagtttccaatacaataataactttttcttttcaattg 697  Q
    ||||| ||||||||||||| ||||| || |||||||||||||||||||      ||| |||| ||||||||| ||||||||||||||||    
T  9422 aaaataagtgtcgttttagccaaaaaaaatgttttaaaatgaatgtca------ttttcaatgcaataataattttttcttttcaattg 9504  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 680
Target Start/End: Complemental strand, 75482 - 75410
Alignment:
Q  609 aaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtca-attcagtttccaatacaataataa 680  Q
    ||||| |||||||||||||  |||| |||||||| ||||||||||||| ||||||||| |||  |||||||||    
T  75482 aaaataagtgtcgttttagcaaaaagaattgtttcaaaatgaatgtcacattcagttttcaaagcaataataa 75410  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 655
Target Start/End: Original strand, 321687 - 321742
Alignment:
Q  599 cctccttttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtc 655  Q
    ||||| ||| ||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  321687 cctccattttaaaatgagtgtcgctttag-caaaaaaattgttttaaaatgaatgtc 321742  T

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Target: scaffold0580 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 1592 - 1658
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||||| ||||||||||||||||  ||||| | |||| |||| ||| |||||||||||||    
T  1592 tagtactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtca 1658  T

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Target: scaffold0580; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 9331 - 9397
Alignment:
Q  591 tagtactccctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    ||||||||||||| ||||||||||||||||  ||||| | |||| |||| ||| |||||||||||||    
T  9331 tagtactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtca 9397  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 656
Target Start/End: Original strand, 45354 - 45411
Alignment:
Q  600 ctccttttcaaaatgagtgtcgttttagtc-aaaataattgttttaaaatgaatgtca 656  Q
    |||| ||||||||| ||||||||||||| | |||| |||||||| |||||||||||||    
T  45354 ctccgtttcaaaattagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtca 45411  T

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